Lcy07g007630 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g007630
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
LocationChr07: 35170935 .. 35177629 (-)
RNA-Seq ExpressionLcy07g007630
SyntenyLcy07g007630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTAGCAGGGGTCAATTGCATGGTCACACCAGACATGAATAGGCTACTATCCAGGCCGTTTACAGAGGAAGAGGTGCTAATTGCTCTTCGCCAGACTCATCCCACAAAGGCACCTGGTCCAGATGGACTGTCGGGATCCTTCTATAGATCCTTCTGGACTACGGTGGGGACGAATGTAGTTAAAGCTTGCCTCAAAGTTCTAAACGATAATGTGTCCCCTGGCCCTCTGAATGAAACTCTAGTTACTCTCATACCGAAGGTTAAGGCAGCCCGGAAATTATCAGAATACAGGCCCATTTCTCTGTGCAACGTAACTTATAAGCTGATATCCAAGGCAATAGTTAACAGATTCAAAGGTATCCTCAATTTGATTATTGCCCCTAACCAAAGTACATTCATGCCAGGTAGGTGCGTGGTGGACAATGCTATTATGGGATACGAATGTATACACTCTCTGAAATCTCGTAACCGGGGCAAGAGGGGTTGGGCAGCTTCTGAAGCTGGACATGAGTAAGGCCTATGACAGGGTCGAATGGGGTTTTCTCGAACAGATTATGTTGCACATAGGCTTTGACTCCTCGTGGGTGAATCTGATCATGCGATGTGTAAGCTCTGTTTCGTACTCTTTCAACCTTAATGGGGAGCGGGTAGGCCTTGTTCAGCCCAACCAAGGTCTTGGACAGGGAGACCCATTATCCCCATATTTATTCTTGTTCTGTGCAGAGGATTTGTCGAATATGTTGTTAGAGGCTGAGAAACGGAAATGTATTTCGGGTTTCAAGATAGCGAGGGGTGGGCCGACTCTATCCCACTTGTTTTTTTGCAGATGATAGTTTATTGTTTGTTAAGGCCAACACACCAAAGGCCCAAGCGATCCGTCACATTTTGAAGGCTTATGAAGCCGCTTCTGGCCAAACAATTAATTTCGACAAATCAAGGATTTCATTTAGCCCAAACACTGCTCCTGGTACAACAGAGGGGATTCGACAAGTGCTTGGTATCCAGGCTAGCTCCATCCATCAAGTCTACCTTGGCCTCCCGACCTTTATGCCTCGAAATAAGACAGGTACGTTAAATTTTATCAAGGACAAGATCTGGCGTTACCTGCATGGTTGGAAGGGTAAATTATTCTCTATTAGAGGTAAGGAGATTCTATTGAAAGCAGTAATACAAGCGATTCCATGTTTTACTATGAATTGTTTTCGCCTGCCAAAAAAGCTGATAAAATCGATATCCCAAATAACGGCCAGATTTTGGTGGAACGAGGTTGATGGTAATCAACGTATTCACTGGGTTAAATGGAGTGAAATGTGTCTGCCTAAATGTTTTGGTGGAATGGGCTTCAAGAATCTAGAAATTTTCAACCAGTCACTTCTTGCATAGCAATGCTGGAGAATCCTAAACAACTTGACTCCCTGCTGTCCCGTGTGCTTAAGGGCAGGTATTTTCCAACTAGTGGTTTCATGGAGGCCCAGGCTAGTTCTCGCGCATCTTTTATATGGCGCAGTTTGATGTGGGGGAAAAGCCTCCTTCAAGCGGGTTTGCGTTGGAGGATCGGAGATGGCCAGGCAGCGCGTATATATACCTCAAACTGGCTTCCCCGGGAGTCCTCCTTCAGAGTCCAATCCGCGACACATCTCCCTTTAGACAGCTATGTCAGTGAATTATTCTCAGTGTCGGGGGCGTGGGATGAAACCAAAATTCGACAATTCTTTGAGCCTGATGAAGCTAATCTAATTCTTGGCATCCCATTAGTTAATTCCCGCCAGGCAGATCGGCAGATATGGCATCATGAAAAGGAGGGGCAGTTCACGGTTAAAAGCGGATACAAAGTGGGTCAAAGTGTTTTATTGACTCAGAGAGCCTCTTCATCAAATGATGAGCAGGTGGCTGCATGGTGGAAAAACTTTTGGGGAATGAGAATCCCAGGGAAAATCAAAATCTTTGTATGGCGGCTAATCAAGGATAGGCTGCCTGCCTATAGTGGAAAATCTGAATCAAAGAGGGTTGGACCTCCCAAACCTCTGTTTGTTCTGTGGCAGACATGGAGAAAATGCCTTGCATGTATTTTGGGCGTGCAAGTTTACGAGAAGCCAATGGGCCCTATCTGTTTTCTCGCTGATTTTGTTGGGGTCAAGTCCGGTTTCAACATTCTCTTTGATACAGGACTTAAAGGACCAAATGTCATGGGAAAAGTTTGGGGTGCTAGCTACCTTCTTGTGGGGAATTTGGTCGGCCCGCAACCGTATGCGCAGCCAAGGGGTTCGACCAAGCCCTGATATTGGAGACTGGGCGAGTCAGTATGTAAGAATTTTCCAAGAGGCTTTGACCTGTCAAGATTTTGGGGGACCACCTCGACACAACCGGGCAGTAGTGAAATGGAGGGCACCAGATGAGGGGTTTTTTAAACTCAACGTTGATGCAGCCTTTGATAAGAATTCCTGTACAGCTGGCCTGGGAGCAATTGTTCGTGATGATCAAGGACAAGTTATGTTATCAGCTGCAAAATTTTGTTGATGTTTGGTGTCGGTGGATCTTGCTGAAGCGTCTGCAGCAGCGGAGGGAGTTCGCTTATGCGCTGAAGCGAGCCTTACTCCAATTATATTAGAAACATACTCATGGAGGTTTTTCCATTTGCTCCAAAAGGAAAGAGAGGATATATTGGAAGTTGGTTGGATGATGGCGGATCTCTGTCATCAACTCCGAGGGGAACCAGGCGGCTGATCGTTTGGCTCACCTTGCTATTAGAAATCGTTGGGATATTGTATGGGTTGAGGGATCTCCGAGTGAGGTCGAGAGTATTGTGTTGAGGGATGTTCCCGTTTCTTGATCCGTTGCAATACTACTTATCTTTCAAAAAAAAAAAAAAAAAAAACAACCTAATCGTTTAAAAAAGTCTCCTTCGCGTCAGGGCCAAATGTTTAGCCAAAAAGTACTTCCTTTAAATTTCAATTTGTATTTTCTATTCTTTATTTCTCTTTGAGAAGACTTTTCAAAATTTTAAAGTTTTTTTATACTTCTCTTTTGTTTATGCAACTGTAAGCTAAGTTTTCCTTTAAAAAAAGAAAAAAAAAAACTATAAGCTAAGACCCCGTTTGATGACCATTTGGTTTTTTGTTTTTGGTTTTTGGTTTTTAAGCTTATAAACACCACTTTCAACTCTAAGTTTCTTTGGCTTTTCACTTACCTTCTTCCCATGTTTTCAAAAACCAAGCCAATTTTTTAAAACTAAAAATAGTAGTTTTCAAAAACTTGTTTTTGTTTTTAGAATTTGGTTAGGAATTCAAGGGTGTCTTTAACAAAAATGAAAAACATGGTGAGAAAATTTAAAGAAAACAAGCCTAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAATGGGGCCTAAGTTTTTTATTGATTTATTGTCGTGGGTAGTAATTTATGTTTTTCTATTGGCAAAAATTGTAAATATTAAAAATTTATTAAATATTTTTTATTATTCTCATTATGTCCTTTATTCTAACAGTGATTGTCACCGATTTGTCACCGATAGAAGTCTATCAGTGACTATCATTCATAGAATTTTATTGGGGCATTTGCAAGAATAGAAAAAAACAAAAATGGAATTTGCAACCATGTCATCAGTTTTTTAATGTTGCAAATATAACAAAAAAAAAGTGGACCCAGCCTAAACATTAAAGTTAAAAAGTAAAAAAAAAAAAAAAAAAACCACTAAAAAACACGCTGAAAATTGGATGTTTAAAAGTATATCAATGGTGTTATTGATATACCATATATCAGCTACATCATTCATTTATTTAGTGTAATTGATATACTTGATATTTGGTATATCAATCAACTGATATACTAAATATATAGTAGATCAAATGTATATTTCATGAATATAATATACTTCATTCACGAAGTATATATACATCAACTTTCATTAGTTTAGATGTCTTTGATATACTTCATTAATAAATAATTATATATATTAACTTTATTTTGGGACAATATGTATTGTTATAAGGAGATTTAAACCTCTAGCCTCTTCGTTGGATGTGTATGTTGGATCGGTATGACAACCCTAGAGGAGGGTGAATAGGGTTTAATGAAATTTTATAAACTTTTTGCTAAAGTGGGTCCAATTTAAACAAATAAGCAAACTTTTTACAAAGAATTAATTTTAACACAAATTGGTCAACAAATTAGAAATAAAATTTAAACACCCAAATTGATTCCAATATAAATGTTTTCCATAAACATTAAAAATAAATTATAGGAATTAATTTCATGCAAATAACGATAAAGAAAATTAATTGCAAAAATTAAACAGTAGAGGGTTAGAGAAAATAACACCGGAAATTTATAGTGGTTCGACAAACGGCCTACTCCACTCCCCAAGCTCCTCTTGGGTATTCGATTGAAGAACACGACTCTTTCCACGACTTAGAGTCCAACTGGTACAATGTTCTTTTTCCGGGAGCAAGAACAAACCCGATCCTTTCCACGGTTTAGGATCAAACCATTACAACCGCTTTTTTTCGGGCTCAAGAGAAACCCTTACAAAGAATTTGGAATTTGAATACAATATTACAAACTCTCTCAAAGAGTAGGTATACAAATTTCCGCTCACAAATTTGTAAGAAAGATTCTTACAAATTACTGCCCTCAAATGGCTAAGAAAAATAAAATTGAATAGCTCAAGAATCTCTCAAAATAAAATCTCTCACAATAAATAAAACAACATTAAAGTTCGAAGAGATAGCAATAGAAGAATTAGAGAGAAAGTGTTGTTCAATTTTGTGAGAGAATGGGGTTATAAATAGGAAGGAGATAAAATTGAAAGAAATTTGAAATAGAACTTAATTTGGACCATTGGATTGAAATTAAAGAAAAATAAAGGGTGGAGATCAAAAGAAATTTAAAATAATAATATAAATAAATAATATTAATAATTAAAAAAACTTTTTAATTTGAAAAACAATCCAACGGTAAGATTCAAAATATAATAATAATAATAATAAAAATAAAATATATATTTTTTTAATTTGAAAATCCCAACGGTAGTCGGTAACTGACTTAAGCATTAAATGAAGTTCAATTTTTTTTAAATAATACAAACCGTTTGACACATAATTTTATTTAATAAAATAATTATATAATATATATATAATATTTAAATAACCAAAAGGTCCATGTGTTGCTCTCCCATTGGTCCACATGTCAGCTTCGGATTGGTCCATTGATGATGACTTGGCCGCCTACGTCATCGCCACCGGTATTTTTCGTTAAAGCTTGTTTCGGCTATAATTTCTTCATTTTAACTCCGATTTGAGTGTTTCAAGAGGCATTGAAAATCTTTGTTCCGAGCTCTACGCTATGGGCACATTAAAACAATAAAATTTTTAGTAATTATAAATTGGGTTTGTTATCATCAAAACATTGATTAATTAATTAGTTAAAATTAATTAATTTGAGATTAAGGGCCAAAAAGCCAACAATGTATGTCTTGTGCTAGTTGAGCTATACTCATGTTGACAAATAATTCATCGATATACTATATGTCATTTTAATAATATACTACCGATACACTAATGATATATTTGAAATTACATTTTTTAGTGAGTATTGATATGCTACTAATACACCAATGATATACTTAAAGTTGCATCTTATTGATATGCTTATAACAACTTTTGCATTCCACGACATTCAATAATACACCAGTAGTTAAAAATATATATTAATTATTTTTTTAAAAAAATAACAAGTCTATGTATTTAGCTATTCATAATCACGTGTATCAATGTTATTAATTATTGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTGACACTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTAAGGTTTGAGATAAGGAGCACTTTGGTCCCTGCCGTCAAATTTTCTGTTAAATTTTAACGGTTGCTAACGTGACACTATTATTTTAATAAAAAAATTATTTTTAAAATTTTTTAAATAAAAAATATTAAAATAATATTATTTTATTATTTTATTATTATTATTTATTTATTTTTCTATTTCTCTCTCTTATTCATCTTCTTCAACCTTTTTCCTCTCCTATCAACCTTTTCTTCTTCCCTTCTTCTTCAGCAGGTCGCCGGCGGCAACTTTTTTTTTTCTTCTTCCCTCACCTTTTCTTCTTCTTCTCATGTTCACACCAATCCATTCTTTTTTTTTTTGTAAATCTCGCCGAAAATCAAAAGAGGGAGGGAGGGACCTCCCCCTCGATTTTCCAACGAGAAATCGAGGGGGAGGTCCCTCCCTCCTTCGGTTCTCGCCGAAAAATCGACACAACTACGTGTCGTCGGTAGCTGGCATTCTCCCTCTCGACGACTCCGTTTTATTCCAGATCTGGCAACTGGCAACGAGCCGCCGGTACGAGCGTTCTCCTTCCCGACTGGAGATCTCAGCGACGGTACAACCCACAGATCCGGTCACTGTCCGACACAGCTACAAGCCGCCGGTAGCTCGCGTTCTCCCTCCCAACAACGCCGTTACATTCCAGATCTGGCAGCAGGCAACGAGTCGTCAGTAGCTCGCGTTCTCCTTTCTGACGGGAGATCTGAGCGGCGTGGGTCAGCTTCGTCGTGCGCGAGCTTCGACAATTCGTGGGCAGCTTTCTTTAAACCCTAG

mRNA sequence

ATGGCCTTAGCAGGGGTCAATTGCATGGTCACACCAGACATGAATAGGCTACTATCCAGGCCGTTTACAGAGGAAGAGGTGCTAATTGCTCTTCGCCAGACTCATCCCACAAAGGCACCTGGTCCAGATGGACTGTCGGGATCCTTCTATAGATCCTTCTGGACTACGGTGGGGACGAATGTAGTTAAAGCTTGCCTCAAAGTTCTAAACGATAATGTTTTGATGTGGGGGAAAAGCCTCCTTCAAGCGGGTTTGCGTTGGAGGATCGGAGATGGCCAGGCAGCGCGTATATATACCTCAAACTGGCTTCCCCGGGAGTCCTCCTTCAGAGTCCAATCCGCGACACATCTCCCTTTAGACAGCTATGTCAGTGAATTATTCTCAGTGTCGGGGGCGTGGGATGAAACCAAAATTCGACAATTCTTTGAGCCTGATGAAGCTAATCTAATTCTTGGCATCCCATTAGTTAATTCCCGCCAGGCAGATCGGCAGATATGGCATCATGAAAAGGAGGGGCAGTTCACGGTTAAAAGCGGATACAAAGTGGGTCAAAGTGTTTTATTGACTCAGAGAGCCTCTTCATCAAATGATGAGCAGGTGGCTGCATGGTGGAAAAACTTTTGGGGAATGAGAATCCCAGGGAAAATCAAAATCTTTGTATGGCGGCTAATCAAGGATAGGCTGCCTGCCTATAGTGGAAAATCTGAATCAAAGAGGGTTGGACCTCCCAAACCTCTGTTTGTTCTGTGGCAGACATGGAGAAAATGCCTTGCATGTATTTTGGGCGTGCAAGTTTACGAGAAGCCAATGGGCCCTATCTGTTTTCTCGCTGATTTTGTTGGGGTCAAGTCCGGTTTCAACATTCTCTTTGATACAGGACTTAAAGGACCAAATGTCATGGGAAAAGTTTGGGGTGCTAGCTACCTTCTTGTGGGGAATTTGGTCGGCCCGCAACCGTATGCGCAGCCAAGGGATCTGGCAACTGGCAACGAGCCGCCGGTACGAGCGTTCTCCTTCCCGACTGGAGATCTCAGCGACGGTACAACCCACAGATCCGGTCACTGTCCGACACAGCTACAAGCCGCCGGTAGCTCGCGTTCTCCCTCCCAACAACGCCGTTACATTCCAGATCTGGCAGCAGGCAACGAGTCGTCAGTAGCTCGCGTTCTCCTTTCTGACGGGAGATCTGAGCGGCGTGGGTCAGCTTCGTCGTGCGCGAGCTTCGACAATTCGTGGGCAGCTTTCTTTAAACCCTAG

Coding sequence (CDS)

ATGGCCTTAGCAGGGGTCAATTGCATGGTCACACCAGACATGAATAGGCTACTATCCAGGCCGTTTACAGAGGAAGAGGTGCTAATTGCTCTTCGCCAGACTCATCCCACAAAGGCACCTGGTCCAGATGGACTGTCGGGATCCTTCTATAGATCCTTCTGGACTACGGTGGGGACGAATGTAGTTAAAGCTTGCCTCAAAGTTCTAAACGATAATGTTTTGATGTGGGGGAAAAGCCTCCTTCAAGCGGGTTTGCGTTGGAGGATCGGAGATGGCCAGGCAGCGCGTATATATACCTCAAACTGGCTTCCCCGGGAGTCCTCCTTCAGAGTCCAATCCGCGACACATCTCCCTTTAGACAGCTATGTCAGTGAATTATTCTCAGTGTCGGGGGCGTGGGATGAAACCAAAATTCGACAATTCTTTGAGCCTGATGAAGCTAATCTAATTCTTGGCATCCCATTAGTTAATTCCCGCCAGGCAGATCGGCAGATATGGCATCATGAAAAGGAGGGGCAGTTCACGGTTAAAAGCGGATACAAAGTGGGTCAAAGTGTTTTATTGACTCAGAGAGCCTCTTCATCAAATGATGAGCAGGTGGCTGCATGGTGGAAAAACTTTTGGGGAATGAGAATCCCAGGGAAAATCAAAATCTTTGTATGGCGGCTAATCAAGGATAGGCTGCCTGCCTATAGTGGAAAATCTGAATCAAAGAGGGTTGGACCTCCCAAACCTCTGTTTGTTCTGTGGCAGACATGGAGAAAATGCCTTGCATGTATTTTGGGCGTGCAAGTTTACGAGAAGCCAATGGGCCCTATCTGTTTTCTCGCTGATTTTGTTGGGGTCAAGTCCGGTTTCAACATTCTCTTTGATACAGGACTTAAAGGACCAAATGTCATGGGAAAAGTTTGGGGTGCTAGCTACCTTCTTGTGGGGAATTTGGTCGGCCCGCAACCGTATGCGCAGCCAAGGGATCTGGCAACTGGCAACGAGCCGCCGGTACGAGCGTTCTCCTTCCCGACTGGAGATCTCAGCGACGGTACAACCCACAGATCCGGTCACTGTCCGACACAGCTACAAGCCGCCGGTAGCTCGCGTTCTCCCTCCCAACAACGCCGTTACATTCCAGATCTGGCAGCAGGCAACGAGTCGTCAGTAGCTCGCGTTCTCCTTTCTGACGGGAGATCTGAGCGGCGTGGGTCAGCTTCGTCGTGCGCGAGCTTCGACAATTCGTGGGCAGCTTTCTTTAAACCCTAG

Protein sequence

MALAGVNCMVTPDMNRLLSRPFTEEEVLIALRQTHPTKAPGPDGLSGSFYRSFWTTVGTNVVKACLKVLNDNVLMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAWDETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRASSSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLPAYSGKSESKRVGPPKPLFVLWQTWRKCLACILGVQVYEKPMGPICFLADFVGVKSGFNILFDTGLKGPNVMGKVWGASYLLVGNLVGPQPYAQPRDLATGNEPPVRAFSFPTGDLSDGTTHRSGHCPTQLQAAGSSRSPSQQRRYIPDLAAGNESSVARVLLSDGRSERRGSASSCASFDNSWAAFFKP
Homology
BLAST of Lcy07g007630 vs. ExPASy TrEMBL
Match: A0A803PUL2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-35
Identity = 87/242 (35.95%), Postives = 121/242 (50.00%), Query Frame = 0

Query: 9    MVTPDMNRLLSRPFTEEEVLIALRQTHPTKAPGPDGLSGSFYRSFWTTVGTNVVKACLKV 68
            +VT   N  L  PFT  EV  AL+     K+PG DG+S  FY+  W+ VG  V  A L +
Sbjct: 846  LVTNAHNDALLAPFTPAEVDSALKTMSLDKSPGIDGISAMFYQQHWSIVGDLVSHAVLNI 905

Query: 69   LNDNVLM---------------------WGKSLLQAGLRWRIGDGQAARIYTSNWLPRES 128
            LN  + +                     WG+ LL  GLRW+IG+G+  R     W+PR +
Sbjct: 906  LNTGIFLTTLSWMQVWATPLSLTWQGIRWGRELLIKGLRWKIGEGRLIRSGFDPWIPRHT 965

Query: 129  SFRVQSATHLPLDSYVSELFSVSGAWDETKIRQFFEPDEANLILGIPLVNSRQADRQIWH 188
            SF   + +  P +  V+ L +    W+ T ++Q+F P + + IL +PL      D+ IWH
Sbjct: 966  SFLPLTYSG-PSNGVVANLITDERQWNATLLQQYFSPIDVDKILTLPLSYFPSRDKLIWH 1025

Query: 189  HEKEGQFTVKSGYKVGQSVLLTQRASSSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDR 230
            H   G FTV+S Y +  S  L     SS      AWWK FW +++  K+KIF WR I D 
Sbjct: 1026 HHSSGNFTVQSAYHLATS--LEDEDLSSTSTSTVAWWKLFWSLQVSQKVKIFPWRAIHDA 1084

BLAST of Lcy07g007630 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-35
Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFS-VSGA 133
           ++WG+ LL+ GLRWRIG+G +  IY  NW+P + + ++ S+  LPL S VS L     G 
Sbjct: 704 ILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGG 763

Query: 134 WDETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVG-QSVLLTQR 193
           W    +R  F PDEA  IL IP+    + DR IW++EK G ++V+SGYKV   +    Q 
Sbjct: 764 WQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQA 823

Query: 194 ASSSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLPAYSGKSESKR 240
            SSS+ E+V  WW  FW M IP KIK+F+WRL  DRLP  +G + SKR
Sbjct: 824 PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLP--TGCNLSKR 869

BLAST of Lcy07g007630 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-08
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0

Query: 6   VNCMVTPDMNRLLSRPFTEEEVLIALRQTHPTKAPGPDGLSGSFYRSFWTTVGTNVVKAC 65
           +   V+   N  L +PF EEE+++AL Q HP KA GPD  S +FY++FW  VG +V   C
Sbjct: 313 IEARVSSGHNCDLLKPFCEEEMIMALHQIHPHKALGPDRFSSAFYKNFWHIVGQDVSCCC 372

Query: 66  LKVLNDNVLM--WGKSLLQAGLRWRIGDGQAARI 98
           L +LN+++ M    + +L+  L   I   Q+A I
Sbjct: 373 LNILNNSMDMKTLSEMILKRALDTVISQSQSAFI 406


HSP 2 Score: 154.5 bits (389), Expect = 1.0e-33
Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 0

Query: 74   LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAW 133
            L+WGK L+  G RWR+G+G++ R+    WLPR  +F+V     LP + YV++L    G W
Sbjct: 1213 LVWGKKLILKGYRWRVGNGESVRVLEDPWLPRPVTFKVYDQPSLPANLYVTDLKMADGQW 1272

Query: 134  DETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRAS 193
            DE  IR  F P +A+LILGIP  +    D+ +WH+ K G+++VKSGY++  S  LT    
Sbjct: 1273 DEGSIRSIFNPTDADLILGIPCSDWDFEDKILWHYSKNGEYSVKSGYRMAAS--LTTEQH 1332

Query: 194  SSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLPA 231
             SN+  +  WWK  W +  P K+K FVW++  + LPA
Sbjct: 1333 QSNEHSIVQWWKKLWRLNFPPKVKHFVWKVAHNWLPA 1367

BLAST of Lcy07g007630 vs. ExPASy TrEMBL
Match: A0A803NGM9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-33
Identity = 73/203 (35.96%), Postives = 110/203 (54.19%), Query Frame = 0

Query: 34   THPTKAPGPDGLSGSFYRSFWTTVGTNVVKACLKVLNDNV-------LMWGKSLLQAGLR 93
            TH  K+    GL       F   +    V  C+++  +N        LMWGK ++  G R
Sbjct: 1046 THLCKSKEKGGLGFRDLGLFNQALLAKQVWRCIRLTKENTSSFVWRSLMWGKKVINNGYR 1105

Query: 94   WRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAWDETKIRQFFEPDE 153
            WR+G+G+  R+    WLPR  SF++     LP + YV++L +  G+WDE  +R  F  ++
Sbjct: 1106 WRVGNGENVRVLEDPWLPRPVSFKIYDKPPLPENLYVADLKNGDGSWDENFVRSVFNMED 1165

Query: 154  ANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRASSSNDEQVAAWWKN 213
            A LIL +P       D+ +WH+ K G++TVKSGYK+  S  L      S+D+    WWK 
Sbjct: 1166 AELILSMPSTGWDIEDKIMWHYSKNGEYTVKSGYKMATS--LASEQYQSDDQMCVDWWKA 1225

Query: 214  FWGMRIPGKIKIFVWRLIKDRLP 230
             W ++IP KIK FVW+L+ + +P
Sbjct: 1226 LWRLKIPPKIKHFVWKLVYNWIP 1246

BLAST of Lcy07g007630 vs. ExPASy TrEMBL
Match: A0A803QQT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.5e-33
Identity = 65/157 (41.40%), Postives = 96/157 (61.15%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAW 133
           L+WGK L+  G RWR+G+G++ R+    WLPR  +F+V     LP + YV++L    G W
Sbjct: 258 LVWGKKLILKGYRWRVGNGESVRVLEDPWLPRPVTFKVYDQPSLPANLYVTDLKLADGQW 317

Query: 134 DETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRAS 193
           DE  IR  F P + +LILGIP  +    D+ +WH+ K G+++VKSGY++  S   T    
Sbjct: 318 DEGFIRSIFNPTDVDLILGIPCSDWDFEDKILWHYSKYGEYSVKSGYRMAAS--FTTEQH 377

Query: 194 SSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLPA 231
            SN+  +  WWK  W ++IP K+K FVW++  + LPA
Sbjct: 378 QSNEHSIVQWWKKLWRLKIPPKVKHFVWKVAHNWLPA 412

BLAST of Lcy07g007630 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-35
Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFS-VSGA 133
           ++WG+ LL+ GLRWRIG+G +  IY  NW+P + + ++ S+  LPL S VS L     G 
Sbjct: 704 ILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGG 763

Query: 134 WDETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVG-QSVLLTQR 193
           W    +R  F PDEA  IL IP+    + DR IW++EK G ++V+SGYKV   +    Q 
Sbjct: 764 WQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQA 823

Query: 194 ASSSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLPAYSGKSESKR 240
            SSS+ E+V  WW  FW M IP KIK+F+WRL  DRLP  +G + SKR
Sbjct: 824 PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLP--TGCNLSKR 869

BLAST of Lcy07g007630 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 68.9 bits (167), Expect = 1.2e-07
Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0

Query: 6   VNCMVTPDMNRLLSRPFTEEEVLIALRQTHPTKAPGPDGLSGSFYRSFWTTVGTNVVKAC 65
           +   V+   N  L +PF EEE+++AL Q HP KA GPD  S +FY++FW  VG +V   C
Sbjct: 313 IEARVSSGHNCDLLKPFCEEEMIMALHQIHPHKALGPDRFSSAFYKNFWHIVGQDVSCCC 372

Query: 66  LKVLNDNVLM--WGKSLLQAGLRWRIGDGQAARI 98
           L +LN+++ M    + +L+  L   I   Q+A I
Sbjct: 373 LNILNNSMDMKTLSEMILKRALDTVISQSQSAFI 406


HSP 2 Score: 146.4 bits (368), Expect = 5.7e-31
Identity = 68/170 (40.00%), Postives = 103/170 (60.59%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAW 133
           ++WG+ ++  G RWR+G+GQ+  I+ SNWLPR S+F+  +  +LP D+ V EL  V   W
Sbjct: 591 ILWGRQVISKGSRWRVGNGQSIMIHKSNWLPRPSTFKPIARPNLPADAVVVELIDVEHCW 650

Query: 134 DETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRAS 193
           ++  I   F+  +A  I+ IPL+     D  IWH+ K GQF+VKSGY+V  S+ L   A+
Sbjct: 651 NKRLIYSVFDKMDAATIVRIPLLRRPMRDEVIWHYNKRGQFSVKSGYRVALSLKLP--AT 710

Query: 194 SSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLPAYSGKSESKRVGPP 244
            S+ E   + WK  W + +P KI+IFVWR +K+ LP+     + K +  P
Sbjct: 711 PSSSENPNSQWKFIWLLTLPEKIRIFVWRAVKNILPSAENLWKRKIIQEP 758

BLAST of Lcy07g007630 vs. NCBI nr
Match: XP_024041921.1 (uncharacterized protein LOC112099052 [Citrus clementina])

HSP 1 Score: 67.4 bits (163), Expect = 3.3e-07
Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 2   ALAGVNCMVTPDMNRLLSRPFTEEEVLIALRQTHPTKAPGPDGLSGSFYRSFWTTVGTNV 61
           AL+GV+  VT +MNR L   F  +EV  AL Q  PTKAPGPDGL   FY+  W  V   V
Sbjct: 160 ALSGVSRRVTSEMNRNLEMLFIADEVKEALFQMCPTKAPGPDGLPAVFYQKHWHLVKQGV 219

Query: 62  VKACLKVLN 71
           +  CL + N
Sbjct: 220 ISTCLHIFN 228


HSP 2 Score: 144.1 bits (362), Expect = 2.8e-30
Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAW 133
           ++WG+ ++  GLRWRIGDG++A+IY S W+PR S+F+  S  +LPLDS VSEL   +  W
Sbjct: 61  ILWGRQIINKGLRWRIGDGKSAKIYQSCWIPRPSTFKPFSPPNLPLDSTVSELIDANNIW 120

Query: 134 DETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRAS 193
            E  I+Q F  + A  IL IP   +   D  +WH +K G +T KSGY+V  +     + +
Sbjct: 121 KELLIQQNFIKEYAQQILRIPQPRTSSPDEPLWHFDKRGDYTAKSGYQVALNQKFPDQPT 180

Query: 194 SSND-EQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLP 230
           SSN+  +    W   W   +P K+KIF+WR  ++ LP
Sbjct: 181 SSNNLSKKQVPWSLIWAAELPAKVKIFMWRAARNMLP 217

BLAST of Lcy07g007630 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 142.9 bits (359), Expect = 6.3e-30
Identity = 65/170 (38.24%), Postives = 99/170 (58.24%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAW 133
           ++WG+ +L  G RWRIG+GQ   +Y +NW+PR ++F+  SA  +  D+ V+EL      W
Sbjct: 710 IVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTTVAELIDEKQQW 769

Query: 134 DETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRAS 193
            E  I Q F P++A  I+ IPL    + D+ IWH++K+G ++VKSGY+V   +   +  S
Sbjct: 770 REDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGYYSVKSGYQVAMRIKFPEDPS 829

Query: 194 SSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLPAYSGKSESKRVGPP 244
            SN +Q    W+  W + IP K+KIF+WR   D LP      + K +  P
Sbjct: 830 CSNHDQ--NLWRFIWKLAIPEKVKIFLWRAAHDLLPTAENLWKKKVLQEP 877

BLAST of Lcy07g007630 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-10
Identity = 37/69 (53.62%), Postives = 45/69 (65.22%), Query Frame = 0

Query: 2   ALAGVNCMVTPDMNRLLSRPFTEEEVLIALRQTHPTKAPGPDGLSGSFYRSFWTTVGTNV 61
           ALAG+   VT +MN  L  PFTEEEV  AL Q  PTKAPGPDGL  +F++  W +V   V
Sbjct: 378 ALAGLKPRVTLEMNNQLDSPFTEEEVSTALSQMCPTKAPGPDGLPAAFFQKHWDSVKLGV 437

Query: 62  VKACLKVLN 71
           +  CL +LN
Sbjct: 438 ISTCLHILN 446


HSP 2 Score: 141.4 bits (355), Expect = 1.8e-29
Identity = 64/156 (41.03%), Postives = 92/156 (58.97%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGAW 133
           + WG+ +L  G+R RIGDG+   +Y  +W+PR   FRV S   L  ++ VSEL    G W
Sbjct: 84  IFWGREVLLRGIRCRIGDGRNIAVYKDSWMPRPGGFRVYSPKCLHENAMVSELMEQQGRW 143

Query: 134 DETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQRAS 193
           D+  +R  F  DE  LIL IPL  + + D  +WH +K+G+F++KS YKV  +  L  +AS
Sbjct: 144 DQGLVRSCFLGDEVELILSIPLSINHREDAYLWHFDKKGKFSIKSAYKVALADQLNDQAS 203

Query: 194 SSNDEQVAAWWKNFWGMRIPGKIKIFVWRLIKDRLP 230
            S    +  WWK  W + +P KI+IF W+  K+ LP
Sbjct: 204 CSYG--LLTWWKKLWSLELPSKIRIFYWKACKEILP 237

BLAST of Lcy07g007630 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-12
Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = 0

Query: 74  LMWGKSLLQAGLRWRIGDGQAARIYTSNWLPRESSFRVQSATHLPLDSYVSELFSVSGA- 133
           L+ G +LL+ G R  IGDGQ  RI   N +      R  +      +  ++ LF   G+ 
Sbjct: 27  LLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPP-RPLNTEETYKEMTINNLFERKGSY 86

Query: 134 --WDETKIRQFFEPDEANLILGIPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSVLLTQ 193
             WD++KI QF +  +   I  I L  S++ D+ IW++   G++TV+SGY      LLT 
Sbjct: 87  YFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGY-----WLLTH 146

Query: 194 RASSS----NDEQVAAWWK-NFWGMRIPGKIKIFVWRLIKDRL 229
             S++    N    +   K   W + I  K+K F+WR +   L
Sbjct: 147 DPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQAL 183

BLAST of Lcy07g007630 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 4.4e-05
Identity = 28/94 (29.79%), Postives = 48/94 (51.06%), Query Frame = 0

Query: 96  RIYTSNWLPRESSFRVQSATHLPLDS--YVSELFSV-SGAWDETKIRQFFEPDEANLILG 155
           R++   W+P   +   +S  ++  DS  YV++L    +  W   +++   +P +  LILG
Sbjct: 4   RVWKDPWIPTILARPAKSILNI-RDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPLILG 63

Query: 156 IPLVNSRQADRQIWHHEKEGQFTVKSGYKVGQSV 187
           I    +  +D   W H K G +TVKSGY V + +
Sbjct: 64  IRPSRTYLSDGFSWSHTKSGNYTVKSGYWVARDL 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A803PUL21.1e-3535.95Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DAR41.8e-3546.43uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DAR45.6e-0839.36uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803NGM98.5e-3335.96Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QQT28.5e-3341.40Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022150918.13.8e-3546.43uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_022150918.11.2e-0739.36uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_024041921.13.3e-0749.28uncharacterized protein LOC112099052 [Citrus clementina][more]
XP_024037590.16.3e-3038.24uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_024037590.11.9e-1053.62uncharacterized protein LOC112097210 [Citrus clementina][more]
Match NameE-valueIdentityDescription
AT3G09510.12.2e-1231.29Ribonuclease H-like superfamily protein [more]
AT2G22440.14.4e-0529.79BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..371
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 9..72
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 77..179
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 9..72
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 77..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g007630.1Lcy07g007630.1mRNA