Lcy07g006590 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGTAATGGTCGAAGTGGTGGACTTTGTTTACTATGGAAGGAGGAAATGAATGTCACAATTAGATCGTTTTCGCAATTTCATATTGATGCATCTGTTCTATGGGATCCTGGTTTATATGGGAATCCGAATACAAATCAAAGGAAATTTACTTGGGATCTCATCTGCATATTGCATAATCAGGACGAATCTGCCTGGATCATTGGGGGGGATTTCAATGCTACTTTATCATATGAGGAAAAAGAAGGTGGTGCGCCCACCAGAGAGTCCCAAATGGATATGTTTCGGAATGTATTGGATGAATGTGAGCTGCAGGATCTTGACTATCTGAGTGAAATGTATACTTGGTCAAATAGGCATATGTGTGAAGTGCAAATCAATGAATGACTTGATCGGTTCGTTGCTAATGAGGCATTTT ATGGATTGTAATGGTCGAAGTGGTGGACTTTGTTTACTATGGAAGGAGGAAATGAATGTCACAATTAGATCGTTTTCGCAATTTCATATTGATGCATCTGTTCTATGGGATCCTGGTTTATATGGGAATCCGAATACAAATCAAAGGAAATTTACTTGGGATCTCATCTGCATATTGCATAATCAGGACGAATCTGCCTGGATCATTGGGGGGGATTTCAATGCTACTTTATCATATGAGGAAAAAGAAGGTGGTGCGCCCACCAGAGAGTCCCAAATGGATATGTTTCGGAATGTATTGGATGAATGTGAGCTGCAGGATCTTGACTATCTGAGTGAAATGTATACTTGGTCAAATAGGCATATGTGTGAAGTGCAAATCAATGAATGACTTGATCGGTTCGTTGCTAATGAGGCATTTT ATGGATTGTAATGGTCGAAGTGGTGGACTTTGTTTACTATGGAAGGAGGAAATGAATGTCACAATTAGATCGTTTTCGCAATTTCATATTGATGCATCTGTTCTATGGGATCCTGGTTTATATGGGAATCCGAATACAAATCAAAGGAAATTTACTTGGGATCTCATCTGCATATTGCATAATCAGGACGAATCTGCCTGGATCATTGGGGGGGATTTCAATGCTACTTTATCATATGAGGAAAAAGAAGGTGGTGCGCCCACCAGAGAGTCCCAAATGGATATGTTTCGGAATGTATTGGATGAATGTGAGCTGCAGGATCTTGACTATCTGAGTGAAATGTATACTTGGTCAAATAGGCATATGTGTGAAGTGCAAATCAATGAATGA MDCNGRSGGLCLLWKEEMNVTIRSFSQFHIDASVLWDPGLYGNPNTNQRKFTWDLICILHNQDESAWIIGGDFNATLSYEEKEGGAPTRESQMDMFRNVLDECELQDLDYLSEMYTWSNRHMCEVQINE Homology
BLAST of Lcy07g006590 vs. ExPASy TrEMBL
Match: A0A2N9J7Z5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60373 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.3e-24 Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of Lcy07g006590 vs. ExPASy TrEMBL
Match: A0A2N9G656 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22762 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.3e-24 Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of Lcy07g006590 vs. ExPASy TrEMBL
Match: A0A1R3FXZ5 (Endonuclease/exonuclease/phosphatase OS=Corchorus capsularis OX=210143 GN=CCACVL1_30309 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 0
BLAST of Lcy07g006590 vs. ExPASy TrEMBL
Match: A0A5B6UWI4 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_028665 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 4.2e-23 Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 0
BLAST of Lcy07g006590 vs. ExPASy TrEMBL
Match: A0A5B6UCE5 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_018717 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 4.2e-23 Identity = 56/137 (40.88%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of Lcy07g006590 vs. NCBI nr
Match: XP_042973125.1 (uncharacterized protein LOC122304929 [Carya illinoinensis]) HSP 1 Score: 130.6 bits (327), Expect = 9.9e-27 Identity = 62/127 (48.82%), Postives = 80/127 (62.99%), Query Frame = 0
BLAST of Lcy07g006590 vs. NCBI nr
Match: XP_042950313.1 (uncharacterized protein LOC122282426 [Carya illinoinensis]) HSP 1 Score: 127.9 bits (320), Expect = 6.4e-26 Identity = 59/126 (46.83%), Postives = 80/126 (63.49%), Query Frame = 0
BLAST of Lcy07g006590 vs. NCBI nr
Match: KAG6636592.1 (hypothetical protein CIPAW_11G121200 [Carya illinoinensis]) HSP 1 Score: 127.9 bits (320), Expect = 6.4e-26 Identity = 59/126 (46.83%), Postives = 80/126 (63.49%), Query Frame = 0
BLAST of Lcy07g006590 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia]) HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25 Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of Lcy07g006590 vs. NCBI nr
Match: KAG2685210.1 (hypothetical protein I3760_10G113500 [Carya illinoinensis]) HSP 1 Score: 126.3 bits (316), Expect = 1.9e-25 Identity = 61/127 (48.03%), Postives = 78/127 (61.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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