Lcy07g006190 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g006190
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr07: 32044817 .. 32045523 (+)
RNA-Seq Expression	Lcy07g006190
Synteny	Lcy07g006190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAGAGGATTGAGCTGATTTTGGTTATTGCAGAGAAAATCAACATGAATATGCAGGCAAACAAGGCATGTCTCTTCCTCTTTCTCTCCCTGTGATGGTCATAGAATTACATGAGCTGATTTTGTTTTCTTTTCCAAAACAAAAAACACATGGTTTTTAACCTACGATCTTTCTCATGATATAAAATAAGTAAAAAAAGAAATAGAAGAATATTATGTTCAAATCTCTCACCCTAGATATTGTTGAAAATTGATTTTCAGGAAGTAGAAAATAGAAATGTACAAAATAAATTGGAGAAAAGAGTAGACACAGTAGACTATCGATCATCGGCGGGACAAGGCTTAGAAAAGAGGAATGTTCAGGTTGTCCATCAGTCCCATTCAACGCCGCAAGATTTCTCCACCAGCGGCGGCGTCCTGGCCGGTGCCGCGGCGGCGGTTGCAAACACCCTCCAGTCTGCTAAGGAAGCCATCTCTCGCAAATAAATCCCTCCCTTACACTTGACAAAAAAACAACATGTTCAATCGTCAAATCTAAAAATATTTCGTGTGTTGCAACTTGTGCTATGTAATCAAATAACAATACTATAGTTTCTCCTTTGGTGGTTGTGGCAATGGCAACTTTGTCAAGTTGCTTACAATATTTGTTTAGAAATGAGAAATTTATTTTTCTCATATAATTTTTTAAGAGATAATAAATCGAGTAG

mRNA sequence

CAACAGAGGATTGAGCTGATTTTGGTTATTGCAGAGAAAATCAACATGAATATGCAGGCAAACAAGGAAGTAGAAAATAGAAATGTACAAAATAAATTGGAGAAAAGAGTAGACACAGTAGACTATCGATCATCGGCGGGACAAGGCTTAGAAAAGAGGAATGTTCAGGTTGTCCATCAGTCCCATTCAACGCCGCAAGATTTCTCCACCAGCGGCGGCGTCCTGGCCGGTGCCGCGGCGGCGGTTGCAAACACCCTCCAGTCTGCTAAGGAAGCCATCTCTCGCAAATAAATCCCTCCCTTACACTTGACAAAAAAACAACATGTTCAATCGTCAAATCTAAAAATATTTCGTGTGTTGCAACTTGTGCTATGTAATCAAATAACAATACTATAGTTTCTCCTTTGGTGGTTGTGGCAATGGCAACTTTGTCAAGTTGCTTACAATATTTGTTTAGAAATGAGAAATTTATTTTTCTCATATAATTTTTTAAGAGATAATAAATCGAGTAG

Coding sequence (CDS)

ATGAATATGCAGGCAAACAAGGAAGTAGAAAATAGAAATGTACAAAATAAATTGGAGAAAAGAGTAGACACAGTAGACTATCGATCATCGGCGGGACAAGGCTTAGAAAAGAGGAATGTTCAGGTTGTCCATCAGTCCCATTCAACGCCGCAAGATTTCTCCACCAGCGGCGGCGTCCTGGCCGGTGCCGCGGCGGCGGTTGCAAACACCCTCCAGTCTGCTAAGGAAGCCATCTCTCGCAAATAA

Protein sequence

MNMQANKEVENRNVQNKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGVLAGAAAAVANTLQSAKEAISRK

Homology

[Close]

BLAST of Lcy07g006190 vs. ExPASy TrEMBL
Match: A0A6J1L1V6 (uncharacterized protein LOC111499649 OS=Cucurbita maxima OX=3661 GN=LOC111499649 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-25
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MNMQANKEVENRNVQNKL-EKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGV 60
          MNMQA KEVE RN Q +L EK+V+TV+YRSSAGQGLEK+NVQVVHQ HSTPQ+F+TSGGV
Sbjct: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISRK 82
          LAGAAAAVANTLQSAKEAISRK
Sbjct: 61 LAGAAAAVANTLQSAKEAISRK 82

[Close]

BLAST of Lcy07g006190 vs. ExPASy TrEMBL
Match: A0A6J1G7N3 (uncharacterized protein LOC111451572 OS=Cucurbita moschata OX=3662 GN=LOC111451572 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-25
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MNMQANKEVENRNVQNKL-EKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGV 60
          MNMQA KEVE RN Q +L EK+V+TV+YRSSAGQGLEK+NVQVVHQ HSTPQ+F+TSGGV
Sbjct: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISRK 82
          LAGAAAAVANTLQSAKEAISRK
Sbjct: 61 LAGAAAAVANTLQSAKEAISRK 82

[Close]

BLAST of Lcy07g006190 vs. ExPASy TrEMBL
Match: A0A1S4E3Y2 (uncharacterized protein LOC103501120 OS=Cucumis melo OX=3656 GN=LOC103501120 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.3e-24
Identity = 67/83 (80.72%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MNMQANKEVENRNV--QNKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGG 60
          MNMQANKEVE RN   Q ++EKRV+TVDYRSS GQGLEKRNVQVVH  HS+ ++F+TSGG
Sbjct: 1  MNMQANKEVERRNAQGQGQVEKRVETVDYRSSVGQGLEKRNVQVVHVPHSSSENFATSGG 60

Query: 61 VLAGAAAAVANTLQSAKEAISRK 82
          VLAGAAAAVANTLQSAKEAISRK
Sbjct: 61 VLAGAAAAVANTLQSAKEAISRK 83

[Close]

BLAST of Lcy07g006190 vs. ExPASy TrEMBL
Match: A0A0A0LNC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427870 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.5e-22
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 0


Query: 7  KEVENRNVQNKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGVLAGAAAA 66
          +EVE RN Q ++EKRV+TVDYRSS GQGLEKRNVQVVH  HS+ ++F+TSGGVLAGAAAA
Sbjct: 12 QEVERRNAQGQVEKRVETVDYRSSVGQGLEKRNVQVVHLPHSSTENFATSGGVLAGAAAA 71

Query: 67 VANTLQSAKEAISRK 82
          VANTLQSAKEAISRK
Sbjct: 72 VANTLQSAKEAISRK 86

[Close]

BLAST of Lcy07g006190 vs. ExPASy TrEMBL
Match: A0A5A7VM80 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00210 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.7e-20
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 7  KEVENRNV--QNKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGVLAGAA 66
          +EVE RN   Q ++EKRV+TVDYRSS GQGLEKRNVQVVH  HS+ ++F+TSGGVLAGAA
Sbjct: 2  QEVERRNAQGQGQVEKRVETVDYRSSVGQGLEKRNVQVVHVPHSSSENFATSGGVLAGAA 61

Query: 67 AAVANTLQSAKEAISRK 82
          AAVANTLQSAKEAISRK
Sbjct: 62 AAVANTLQSAKEAISRK 78

[Close]

BLAST of Lcy07g006190 vs. NCBI nr
Match: XP_038902745.1 (uncharacterized protein LOC120089373 [Benincasa hispida])

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-25
Identity = 67/80 (83.75%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 1  MNMQANKEVENRNVQNKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGVL 60
          MNMQANKEVE RN Q ++EKRV+TVDYRSSAGQGLEKRNVQV+HQSH   ++F+TSGGVL
Sbjct: 1  MNMQANKEVELRNAQGQMEKRVETVDYRSSAGQGLEKRNVQVIHQSHPPAENFATSGGVL 60

Query: 61 AGAAAAVANTLQSAKEAISR 81
          AGAAAAVANTLQSAKEAISR
Sbjct: 61 AGAAAAVANTLQSAKEAISR 80

[Close]

BLAST of Lcy07g006190 vs. NCBI nr
Match: XP_022947813.1 (uncharacterized protein LOC111451572 [Cucurbita moschata] >XP_023007040.1 uncharacterized protein LOC111499649 [Cucurbita maxima] >XP_023532058.1 uncharacterized protein LOC111794336 [Cucurbita pepo subsp. pepo] >KAG6605184.1 hypothetical protein SDJN03_02501, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.8 bits (312), Expect = 3.4e-25
Identity = 69/82 (84.15%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MNMQANKEVENRNVQNKL-EKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGV 60
          MNMQA KEVE RN Q +L EK+V+TV+YRSSAGQGLEK+NVQVVHQ HSTPQ+F+TSGGV
Sbjct: 1  MNMQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGV 60

Query: 61 LAGAAAAVANTLQSAKEAISRK 82
          LAGAAAAVANTLQSAKEAISRK
Sbjct: 61 LAGAAAAVANTLQSAKEAISRK 82

[Close]

BLAST of Lcy07g006190 vs. NCBI nr
Match: XP_031737171.1 (uncharacterized protein LOC105434696 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 3.4e-25
Identity = 67/81 (82.72%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 1  MNMQANKEVENRNVQNKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGVL 60
          MNMQANKEVE RN Q ++EKRV+TVDYRSS GQGLEKRNVQVVH  HS+ ++F+TSGGVL
Sbjct: 1  MNMQANKEVERRNAQGQVEKRVETVDYRSSVGQGLEKRNVQVVHLPHSSTENFATSGGVL 60

Query: 61 AGAAAAVANTLQSAKEAISRK 82
          AGAAAAVANTLQSAKEAISRK
Sbjct: 61 AGAAAAVANTLQSAKEAISRK 81

[Close]

BLAST of Lcy07g006190 vs. NCBI nr
Match: KAE8652321.1 (hypothetical protein Csa_022111 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 3.8e-24
Identity = 65/81 (80.25%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 1  MNMQANKEVENRNVQNKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGVL 60
          MNMQANK +E RN Q ++EKRV+TVDYRSS GQGLEKRNVQVVH  HS+ ++F+TSGGVL
Sbjct: 1  MNMQANKALERRNAQGQVEKRVETVDYRSSVGQGLEKRNVQVVHLPHSSTENFATSGGVL 60

Query: 61 AGAAAAVANTLQSAKEAISRK 82
          AGAAAAVANTLQSAKEAISRK
Sbjct: 61 AGAAAAVANTLQSAKEAISRK 81

[Close]

BLAST of Lcy07g006190 vs. NCBI nr
Match: KAG7035166.1 (hypothetical protein SDJN02_01961, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.9 bits (302), Expect = 4.9e-24
Identity = 67/80 (83.75%), Postives = 74/80 (92.50%), Query Frame = 0


Query: 3  MQANKEVENRNVQNKL-EKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSGGVLA 62
          MQA KEVE RN Q +L EK+V+TV+YRSSAGQGLEK+NVQVVHQ HSTPQ+F+TSGGVLA
Sbjct: 6  MQATKEVERRNAQGELMEKKVETVEYRSSAGQGLEKKNVQVVHQVHSTPQNFATSGGVLA 65

Query: 63 GAAAAVANTLQSAKEAISRK 82
          GAAAAVANTLQSAKEAISRK
Sbjct: 66 GAAAAVANTLQSAKEAISRK 85

[Close]

BLAST of Lcy07g006190 vs. TAIR 10
Match: AT5G67265.1 (unknown protein. )

HSP 1 Score: 67.0 bits (162), Expect = 7.9e-12
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 1  MNMQANKEVENRNVQ---NKLEKRVDTVDYRSSAGQGLEKRNVQVVHQSHSTPQDFSTSG 60
          MN+++ KE+E    +   +  +  V+T + RSSAG+G E+RNVQVVHQSH       TSG
Sbjct: 1  MNLKSTKEMETEKRKEDGSSSKVVVETTEQRSSAGKGTEQRNVQVVHQSHP-----KTSG 60

Query: 61 GVLAGAAAAVANTLQSAKEAISR 81
           VL GAAAAV +TLQSAKE IS+
Sbjct: 61 DVLVGAAAAVESTLQSAKEVISK 78

The following BLAST results are available for this feature:

BLAST of Lcy07g006190 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g006190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L1V6	1.7e-25	84.15	uncharacterized protein LOC111499649 OS=Cucurbita maxima OX=3661 GN=LOC111499649...	[more]
A0A6J1G7N3	1.7e-25	84.15	uncharacterized protein LOC111451572 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A1S4E3Y2	5.3e-24	80.72	uncharacterized protein LOC103501120 OS=Cucumis melo OX=3656 GN=LOC103501120 PE=...	[more]
A0A0A0LNC0	8.5e-22	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G427870 PE=4 SV=1	[more]
A0A5A7VM80	2.7e-20	77.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy07g006190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902745.1	2.0e-25	83.75	uncharacterized protein LOC120089373 [Benincasa hispida]	[more]
XP_022947813.1	3.4e-25	84.15	uncharacterized protein LOC111451572 [Cucurbita moschata] >XP_023007040.1 unchar...	[more]
XP_031737171.1	3.4e-25	82.72	uncharacterized protein LOC105434696 [Cucumis sativus]	[more]
KAE8652321.1	3.8e-24	80.25	hypothetical protein Csa_022111 [Cucumis sativus]	[more]
KAG7035166.1	4.9e-24	83.75	hypothetical protein SDJN02_01961, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy07g006190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67265.1	7.9e-12	53.01	unknown protein.	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g006190.1	Lcy07g006190.1	mRNA