Lcy07g005940 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g005940
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr07: 30610093 .. 30614962 (+)
RNA-Seq ExpressionLcy07g005940
SyntenyLcy07g005940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACCATATACGAGAAAGCCTCGGGTCAAATTATAAACTATGGTAAATCAATGTTCATGGTGAGCCCAAACACTAGGGAGGAGATGATCATGTCCATCAAGGAGGAGCTACGAGTCCAACACACCATCAGCCTTGGCCAATATTGGGGGCTACCTTCGCAGAATGCTAGGAACAAAAAGGAGATCCTTAGCAGCATCAAAGATCGAGTTTGGAGAGCCTTACAAGGATGGAAAGGGAAGTTTTTCTCATACCCTGGAAAGGAATTACTTATTAAATCTGTTGCGCAAGCTATCCCGAATTATGCTATGAGTTGCTTTAAATTTCCGCTTACCCTTTGTAATGAGTTAAACTCTCTTTGTGCTAGGTTCTGGTGGGGTTCCTCTGAATCTGATAAGAAAATTCATTGGCGTAGTTGGAGGAAGCTTTGTATCAATAAAAACAGTGGTGGCTTAGGTTTCAGAGACCTTAATATTTTTAATCAAGCAATGTTGGCGAAACAAAGCTGGCGGCTGATTAAATTTCCAAATAGCCTGCTTGCCAAAGTGTGCTTCGAGGTCGTTATTTAAAAACAGGTCACTTCCTCAAAGCAACTTTGGGCTCCAATCCATCCTACACATGGAGGAGTATTGTTTGGAGAGTTGTTTAAAGATGGCTACAGGTGGAGAGTAGGAAATGGATTTAATATTGATGCCTCTTCAGATCCTTGGATTCTAAAGGAGGGGACAACCAAACCTTTGTTAACTCACCCCAACATTAGGCAGTTTACAGTGGCTCAACTCAAGCTCCCAAGCAGGTTATGGAACGGACCCCTAATTCGATCCTCTTTTATGGAAGAAGATGCAATAGTTGTAACGACCCGACTTCTTAATAAGCCTTAAGGGACCGTTACGACAATGCATGCTTTGGAGGCCTTTTTAAATAAAAATAATTTGAAATATAAACACTAATTTAAACAAAAACTTTAGGACAAAACTTTTATTCGGGATCCCTAAATTTTAAAAGTTTTAAATAATTTCTAAAATATAAATGTACATGACCTCTAGAAAATTTCTCAAACAAATTTATAAATCAATAAAGTAAAACAAAGTTCTTAAAGCGGAAGAAAAATATGAAATTCAGGTCCTCTCATGGTTGTCTATCGGATTCTCATCAATCGCCTTTCACCTGCCCTTGCCTTTACTTGAAAAAAAAATATTTTTGAAAAGAATGAGTATTTAAAATACTCAGTAAGTGACCCTACTATTGAGGTTGGGTCACGCTTTAAAAACATTTTAAAAATCAACAACAATTATCTAATTATCTTTTTGGTGGCTCTAAACTTTATTTTAACTTACTAATGAAAGACGATATACATCAAGTTCATGCATATCCTATACACATCAATTTCATGTGTCTCCTACGGAGGCTGTCAATTTCACGAAACCTCGAGGTCATCAATTTCACGAACCTCGACTTAGATACATCAATTTCATGTCTCTAAGTCCTGTGTAGGTATCTCTGAATGTACATCAATTACATGTACACTTATAAAACTCATAAAATAATTTAAACTCATTTCTTTAATGGAATTTTAAACTCATTCCTTTAATGGAATTTTGAGAGACCACCAACTCAATTATTTCAATATTAACGATTACAAGCAATAATAATAAATTTCATGCTTTCAATAATTTTCATAAACGAAAATATAATAAAAATATTCATAAAGCACGAGAATTTTGAAAAAATCAAACACGTGCACCCAATTAAAAGGTTCAATAGTAAGTTCACTTACCTTGACTTTTAACTCCTTAATTTAAAATGAGAATTTTAATTCTAGCAAAGACGATCTCGCCCTTGAACTAAGTGATTCAAAACTCCAATTAGCGGCTGGTCGGAATCTCAAAATCACTCCAATTTGATTAACTTCCAAATGCCAAGGGAACCTTGAAATCAAAAGCCACAACTAATCGGTATTGACGGAAGAGATTGTTGAGATCTCTTACCAAATAAATTTATAATCCACAATTCCTAAAGCTAACTTGTAGCAGTAGTGGCTGGGGTCGAACACAGGGAGCACGATTATGACTTGTTTATCTTAGATTTATTGTGATGACCGGACTAATGGGGGGTTTTGATACTTGGAAAGAAAGTAAATATGGAAAGAAAACCAATTAAGGAAAATGTTGTAAAAGGAAAGTAAGAAAATTAAATTAAGGGAAGAAATTAATACCTTAAAGAGATCATGCAACCGGGTTAGTCATGGTAAGTTCAATTCAATTAAATCATCAATTTCACTAATAAGTCAAAACAAGTTTAAGCCCGACGTATTCCGGCAACAAACCGAGAATCATGATCCACTATCACAAACATGCAAACGCTAAGTTTGATTCTAGTTTAAATTAATTAATATGCCTATTAACTAATCTAAACCGCAATGGGATCTAGCCGAGTTAATTTACATGCAACGGGCAACAAACCACAATTACAATTAATTAAATCATTTAGTTCTAGGGACGCATGCGTATAATCATAACGTTAACCTATTTGCTACTTAGATTTAGCAAGTAAATTTAGAGAGGGTGCGGTCAAGGTTGTCAATCTTTCCTACCACAATTCAAACTTATAGAAAAAGAACTAAAATCACATAAACATGCTTTGATAATTCAAACAAGAAATTTCATTAAAAGAATATGAACTTACTCTTGACACCCCGGTTACGTGAATGAAGAACTTAGCCTCTTATGGAGCAAGAACAAGCTTGATACATAAAGAAAAGTAAGAAAGAACTAAGAAGAATGGTGGAAAGGGGGAGAGAGATGGACTACAAAGTTGTAGTGAATTGTGTGTTGAGGGATGATTTTAAACCTACACCAAAGGCCTCTATATATAGGGATTCTTGGCCTTCAATTCGTGGTAGAATGATGCTGAATTGGGTCTTCAAACATGGAAAAATTTCAGTCAAATTTGGAAAATTTCAATTCTGGAAAACTGCCTAGTGTCAAGACGCTAGGACACAGCGTCGCGACGCTAGGCCTTCAAGTAAGGAAATGATTCTGCGGATCTCGTAGCGTCGCGACGCTATGGTGAGAGCGTTGCGACGCTACCGCTTCAGCTGCGCGTCAATGCCTTTTTTCCTTATTTGAGTAGCGTTCCAACGTCTGAGTTGAAGGGTCTCGACGCTGTGACGACTCCAGGGGCAAAATGGTCTTTTTACGCTCTGGTTTTGCTCGTTTTAGCCCCGAATCGCTTCCGAAGCTCCAGTGAGGACCTATAGACATATTATACTCATTTTAAAGCATTTTCCGCAAGGAATTCAACTAAGATAAGAAAATTGGGAGATTCTAAGTGTATAATAAATTGGTCTTATCAGGTATACTTGATTAAACGATAAATAAGCCAAATTCACTCCAAATCTCACTTACCAAGTCTAGAAATCACCGGAAAAATCGAAACAAAAGACCCAAGGTTGCTGCTGTCTGCGCGCGTCAAAACATCCCAACAGCCGTTGGACCTCCAAAACTCGCCGAAAAAACACCCACTGCCGCAACAACACTGCTCGGAACCATCCGCTGCCGCCCAGAGCTCGAAAACGCTGCTATACTACTGTGGGTCGCCGGAAAACAGAAAGACCCACGCTTGAACGTCACTGCACGTCGAGAGGCTCGAGATCCACGCTCACTCCAGCCAAAATCGGACTACAACCTGCCGTGAATCTCTTGTTGTAAGCCGAGAAGCTTGCCGGAGGAACGCTCACCGCTGCCGGATGTAACTACTGTCACCGGAGATCCCATAAAGAAGATGGTTCACGGACCTGCTGCAGACGCCGCATGTTGAAGCTCACGGGTCTGTCGGAGAGCGCTGTCGTGGAGGAGATGCTGTCGCCGAACTGGTCGCGAGCTGCCGCTGTGGAGGGAATCGCCGGAGGAGATGCTACCGTCAGGACCACTGACCGCCGTAGAAGAATAGGGGAGAGGGGCTGGTTTTCGGATAGGGAGAAGGGAAGATGAGGGAGAAGGAGGGAATGGCTTGGCTTGGTGGCTGAAATTATTTCCCCTTGGACTGCGTGCAGCTTAAATAAAAGAGGCTAGGGCTTACTTAAACTTAAAATTATTTACAAAAATGCCACCTTTCATCCTTTTCCTCTAAGGAAACACAAAGATCAAGATAAATCATATTTTTCCACTAATTTTCATTGAAAATTACCCTCCAAATTCCAAATTAACTCCAACTTAGGAATTTTGAAATTTATCTCAAATTATGGGCGTTACAACAGCCATCCTAAATACACCAACGAGGCCTAACATGGGGGAGGATGAGATTATCTGGAATTTGGATCCCAAAGGGAAATTTTCAGTGAAGAGTGTTTATCGTATTGGTAGCCAAAGAAGCGATAGAGAGCAGGCAACATCATCTTGCCAGAAGGAAAAGGAGTGTTTTGTGGAAGGCTTTCTGGAAAACAAACATACCCCCGAAGATTAAGATTTGTGGTTGGAGGATATACAATGATGCTCTGCCTACCTTATCAAATCTTAATAAAAGGGGGATGGATGTGTGGCCAATTTGTTGCTTATGCAAAGAAAAATATGAATCTACAACCCATCTCTTTTGGAAATGTAAGATGACCAAAGGGATGTGGTTTAAATATTTTCCTTTAACTAACTTAGAATGTTTAAATGACAGGAACGATTGGCTGATTCCAGACTTTTTCGAGCATTTTTGGAAGGCGGACAGAGGCGGATCATGGATAGAACACAACATTCGAACAAGCCTAATTATCTGCTGGTGAATTTGGGAGTTACGCAATTCAATCAGGAACAACAAGGAGCAGCACACAAAAGAATCAATCCAACAAGTTTTGCAGCAGCTAACCGACAGATCAATTAG

mRNA sequence

ATGTTAACCATATACGAGAAAGCCTCGGGTCAAATTATAAACTATGGTAAATCAATGTTCATGGTGAGCCCAAACACTAGGGAGGAGATGATCATGTCCATCAAGGAGGAGCTACGAGTCCAACACACCATCAGCCTTGGCCAATATTGGGGGCTACCTTCGCAGAATGCTAGGAACAAAAAGGAGATCCTTAGCAGCATCAAAGATCGAGTTTGGAGAGCCTTACAAGGATGGAAAGGGAAGTTTTTCTCATACCCTGGAAAGGAATTACTTATTAAATCTGTTGCGCAAGCTATCCCGAATTATGCTATGAGTTGCTTTAAATTTCCGCTTACCCTTTGTAATGAGTTAAACTCTCTTTGTGCTAGGTGGAGAGTAGGAAATGGATTTAATATTGATGCCTCTTCAGATCCTTGGATTCTAAAGGAGGGGACAACCAAACCTTTGTTAACTCACCCCAACATTAGGCAGTTTACAGTGGCTCAACTCAAGCTCCCAAGCAGACGCCGCATGTTGAAGCTCACGGGTCTGTCGGAGAGCGCTGTCGTGGAGGAGATGCTGTCGCCGAACTGGTCGCGAGCTGCCGCTGTGGAGGGAATCGCCGGAGGAGATGCTACCGAACGATTGGCTGATTCCAGACTTTTTCGAGCATTTTTGGAAGGCGGACAGAGGCGGATCATGGATAGAACACAACATTCGAACAAGCCTAATTATCTGCTGGTGAATTTGGGAGTTACGCAATTCAATCAGGAACAACAAGGAGCAGCACACAAAAGAATCAATCCAACAAGTTTTGCAGCAGCTAACCGACAGATCAATTAG

Coding sequence (CDS)

ATGTTAACCATATACGAGAAAGCCTCGGGTCAAATTATAAACTATGGTAAATCAATGTTCATGGTGAGCCCAAACACTAGGGAGGAGATGATCATGTCCATCAAGGAGGAGCTACGAGTCCAACACACCATCAGCCTTGGCCAATATTGGGGGCTACCTTCGCAGAATGCTAGGAACAAAAAGGAGATCCTTAGCAGCATCAAAGATCGAGTTTGGAGAGCCTTACAAGGATGGAAAGGGAAGTTTTTCTCATACCCTGGAAAGGAATTACTTATTAAATCTGTTGCGCAAGCTATCCCGAATTATGCTATGAGTTGCTTTAAATTTCCGCTTACCCTTTGTAATGAGTTAAACTCTCTTTGTGCTAGGTGGAGAGTAGGAAATGGATTTAATATTGATGCCTCTTCAGATCCTTGGATTCTAAAGGAGGGGACAACCAAACCTTTGTTAACTCACCCCAACATTAGGCAGTTTACAGTGGCTCAACTCAAGCTCCCAAGCAGACGCCGCATGTTGAAGCTCACGGGTCTGTCGGAGAGCGCTGTCGTGGAGGAGATGCTGTCGCCGAACTGGTCGCGAGCTGCCGCTGTGGAGGGAATCGCCGGAGGAGATGCTACCGAACGATTGGCTGATTCCAGACTTTTTCGAGCATTTTTGGAAGGCGGACAGAGGCGGATCATGGATAGAACACAACATTCGAACAAGCCTAATTATCTGCTGGTGAATTTGGGAGTTACGCAATTCAATCAGGAACAACAAGGAGCAGCACACAAAAGAATCAATCCAACAAGTTTTGCAGCAGCTAACCGACAGATCAATTAG

Protein sequence

MLTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNKKEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSLCARWRVGNGFNIDASSDPWILKEGTTKPLLTHPNIRQFTVAQLKLPSRRRMLKLTGLSESAVVEEMLSPNWSRAAAVEGIAGGDATERLADSRLFRAFLEGGQRRIMDRTQHSNKPNYLLVNLGVTQFNQEQQGAAHKRINPTSFAAANRQIN
Homology
[Close]
BLAST of Lcy07g005940 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.9e-04
Identity = 21/69 (30.43%), Postives = 36/69 (52.17%), Query Frame = 0 

Query: 52  LPSQNARNKKEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPL 111
           +P    R  K+    I +RV   + GW+ K  S+ G+  L K+V  ++P ++MS    P 
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 112 TLCNELNSL 121
           ++ N L+ L
Sbjct: 61  SILNRLDQL 69

[Close]
BLAST of Lcy07g005940 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-30
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 0 

Query: 12  IINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNKKEILSSIKDRV 71
           ++NY KSMFMVS NT   +  +I+ EL V  T  +GQY GLPSQ +RNK ++ ++I +RV
Sbjct: 1   MVNYEKSMFMVSRNTSRCVAANIESELHVTRTNCMGQYLGLPSQTSRNKCQVFNNILNRV 60

Query: 72  WRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSLCARWRVGN 129
           W+ LQGWK K FS  GKE+LIK+VAQAIPNY+MSCF+FP+ LC E+NSL AR+  G+
Sbjct: 61  WQFLQGWKEKLFSSGGKEVLIKAVAQAIPNYSMSCFRFPMNLCKEINSLYARFWWGS 117

[Close]
BLAST of Lcy07g005940 vs. ExPASy TrEMBL
Match: A0A803Q3X2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.9e-29
Identity = 72/173 (41.62%), Postives = 96/173 (55.49%), Query Frame = 0 

Query: 1   MLTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNK 60
           +L +Y  ASGQ++NY KS      N   E    +   + V+   + G+Y GLPS   RNK
Sbjct: 39  LLYLYSAASGQLVNYHKSKVCFGRNVAREARQQLASFMGVREVENHGKYLGLPSFVGRNK 98

Query: 61  KEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSL 120
           KE L  IK++VW  ++GWK   FS  GKE+LIK+V QAIP Y MSCF+      + ++ +
Sbjct: 99  KEFLDQIKNKVWAKMKGWKSSMFSMAGKEVLIKAVVQAIPTYTMSCFRLSKKTISSIHRM 158

Query: 121 CARWRVGNGFNIDASSDPWILKEGT----TKPLLTHPNIRQFTVAQLKLPSRR 170
            ARWRVGNG N+    DPW+ +  T     KPLL         VA +KL   R
Sbjct: 159 AARWRVGNGENVRVLEDPWLPRPVTFKIYDKPLLP----ANMVVADMKLGDGR 207

[Close]
BLAST of Lcy07g005940 vs. ExPASy TrEMBL
Match: A0A2N9EFD5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1325 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.9e-26
Identity = 65/150 (43.33%), Postives = 82/150 (54.67%), Query Frame = 0 

Query: 2    LTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNKK 61
            L IYE+ASGQ IN  K+    S NT  ++ ++I        T    +Y GLP    R K+
Sbjct: 1974 LEIYERASGQKINSSKTALFFSHNTSNDLRVTIANLFGTTQTTQFEKYLGLPPVIGRAKR 2033

Query: 62   EILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSLC 121
               +SIKDR+W+ LQGWK K  S  GKE+LIK++ QA P YAMSCFK P  LC E+ S+ 
Sbjct: 2034 RAFNSIKDRIWKCLQGWKEKLLSQAGKEVLIKAMIQAFPTYAMSCFKLPTALCTEIYSMA 2093

Query: 122  -----------ARWRVGNGFNIDASSDPWI 141
                        RWRVG G  I    D W+
Sbjct: 2094 NRFWWGQKGSGMRWRVGTGSRIRVWKDAWL 2123

[Close]
BLAST of Lcy07g005940 vs. ExPASy TrEMBL
Match: A0A2N9GAY0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24411 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25
Identity = 68/149 (45.64%), Postives = 84/149 (56.38%), Query Frame = 0 

Query: 1   MLTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNK 60
           +L +YE+ASGQ IN  K+    S NT  E    +       HT    +Y GLP    R+K
Sbjct: 669 LLALYERASGQKINGEKTALFYSKNTPVETRAVLTAMFGTSHTTQFEKYLGLPLIMGRSK 728

Query: 61  KEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSL 120
           K   + IKDR+WR LQGWK K  S  G+E+LIK+V QAIP YAMSCFKFP  LC E++S+
Sbjct: 729 KRAFNDIKDRIWRRLQGWKEKLLSQAGREILIKAVVQAIPTYAMSCFKFPAGLCAEISSM 788

Query: 121 CAR--WRVGNGFNIDASSDPWILKEGTTK 148
             R  W   NG    A    W+ KE   K
Sbjct: 789 ANRFWWGQRNG----ARKVHWVNKEKLVK 813

[Close]
BLAST of Lcy07g005940 vs. ExPASy TrEMBL
Match: A0A2N9H567 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34870 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25
Identity = 64/124 (51.61%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 1    MLTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNK 60
            +L IYEKASGQ +NY K+    S NT  +M  +I  ELR   T  LG+Y GLP    R K
Sbjct: 1073 ILDIYEKASGQKLNYEKTSLFFSSNTHPDMRHAICTELRTTSTGDLGKYLGLPPIIGRRK 1132

Query: 61   KEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSL 120
            K+    IK +V + LQGWKGK  S  G+E+LIKSVAQAIP + MSCF+ P +LC E+NS+
Sbjct: 1133 KQAFMEIKHKVAKKLQGWKGKLLSQVGREILIKSVAQAIPVFTMSCFQLPASLCKEINSM 1192

Query: 121  CARW 125
              R+
Sbjct: 1193 VGRF 1196

[Close]
BLAST of Lcy07g005940 vs. NCBI nr
Match: XP_022145148.1 (uncharacterized protein LOC111014662 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 3.1e-30
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 0 

Query: 12  IINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNKKEILSSIKDRV 71
           ++NY KSMFMVS NT   +  +I+ EL V  T  +GQY GLPSQ +RNK ++ ++I +RV
Sbjct: 1   MVNYEKSMFMVSRNTSRCVAANIESELHVTRTNCMGQYLGLPSQTSRNKCQVFNNILNRV 60

Query: 72  WRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSLCARWRVGN 129
           W+ LQGWK K FS  GKE+LIK+VAQAIPNY+MSCF+FP+ LC E+NSL AR+  G+
Sbjct: 61  WQFLQGWKEKLFSSGGKEVLIKAVAQAIPNYSMSCFRFPMNLCKEINSLYARFWWGS 117

[Close]
BLAST of Lcy07g005940 vs. NCBI nr
Match: XP_030939190.1 (uncharacterized protein LOC115964041 [Quercus lobata])

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-25
Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = 0 

Query: 1   MLTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNK 60
           +L  YE+ASGQ IN  K+    S +T +++   IKE L+VQ      +Y GLPS   R K
Sbjct: 405 ILATYERASGQKINRAKTTLFFSKSTSDDVQEVIKEALKVQVVQQYEKYLGLPSSVGRKK 464

Query: 61  KEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSL 120
           KE  +++K R+W+ LQGW+ K  S  G+E+L+K+V QA+P Y MSCFK P+TLC+E+ +L
Sbjct: 465 KESFANLKQRIWKKLQGWEAKLLSQAGREILLKAVGQALPTYTMSCFKLPITLCHEIEAL 524

Query: 121 CARWRVGNGFNIDASSDPWILKEGTTKP 149
             ++  G     DA    W+  +   KP
Sbjct: 525 IRKFYWGQ--RGDARKIHWVKWQELCKP 550

[Close]
BLAST of Lcy07g005940 vs. NCBI nr
Match: XP_030936294.1 (uncharacterized protein LOC115961454 [Quercus lobata])

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-25
Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 0 

Query: 1   MLTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNK 60
           +L  YE+ASGQ IN  K+    S +T  ++   IKE L VQ      +Y  LPS   R K
Sbjct: 207 ILVTYERASGQQINRAKTTLFFSKSTSYDVQEVIKEALGVQVVQQYEKYLALPSLVGRKK 266

Query: 61  KEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSL 120
           KE  +++K R+W+ LQGW+ K  S+ G+E+L+K+VAQA+P Y MSCFK P+TLC+E+ +L
Sbjct: 267 KESFANLKQRIWKKLQGWEAKLLSHVGREILLKAVAQALPTYTMSCFKLPITLCHEIEAL 326

Query: 121 CARWRVGNGFNIDASSDPWILKEGTTKP 149
              W+   G + DA    W+  +   KP
Sbjct: 327 I--WKFYWGQHEDARKIHWVKWQELCKP 352

[Close]
BLAST of Lcy07g005940 vs. NCBI nr
Match: XP_023889222.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC112001275 [Quercus suber])

HSP 1 Score: 125.9 bits (315), Expect = 5.2e-25
Identity = 60/124 (48.39%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 1    MLTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNK 60
            +L+ YEKASGQ++N  K+    S  T  +++  IK  L VQ      +Y GLP+   +NK
Sbjct: 973  LLSCYEKASGQLLNLHKTSLFFSKATHPDILNQIKASLGVQEVKHCEKYLGLPTLIGKNK 1032

Query: 61   KEILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSL 120
            KE    IK+RVW  LQGWK +  S  G+E+L+K+V QAIP YAMSCFK P+TLCNE+ SL
Sbjct: 1033 KESFRYIKERVWAKLQGWKEQLLSQAGREVLLKAVIQAIPTYAMSCFKLPITLCNEIESL 1092

Query: 121  CARW 125
              ++
Sbjct: 1093 IKKF 1096

[Close]
BLAST of Lcy07g005940 vs. NCBI nr
Match: XP_023913142.1 (uncharacterized protein LOC112024740 [Quercus suber])

HSP 1 Score: 125.9 bits (315), Expect = 5.2e-25
Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = 0 

Query: 2   LTIYEKASGQIINYGKSMFMVSPNTREEMIMSIKEELRVQHTISLGQYWGLPSQNARNKK 61
           L +Y +ASGQ IN+ KS    S NT E     IK+ L V+       Y GLP+   R+K 
Sbjct: 555 LKLYAEASGQCINFEKSSAYFSSNTSEGQRQQIKQALGVREVDRFDSYLGLPTLIGRSKY 614

Query: 62  EILSSIKDRVWRALQGWKGKFFSYPGKELLIKSVAQAIPNYAMSCFKFPLTLCNELNSLC 121
           +  + +K+RVW+ LQGW+G+  S+ GKE+LIK+VAQ+IP Y M  F  P+ LCNEL++LC
Sbjct: 615 QTFAYLKERVWKKLQGWRGRLLSWAGKEVLIKAVAQSIPTYTMGVFLLPVKLCNELDALC 674

Query: 122 ARWRVGNGFNIDASSDPWILKEGTTKPL----LTHPNIRQFTVAQL 164
           AR+  G   + D     W   +  TKP     +   +IR F +A L
Sbjct: 675 ARFWWGQ--SGDERKIHWKSWKFLTKPKKEGGMGFRDIRSFNLAML 718

The following BLAST results are available for this feature:
BLAST of Lcy07g005940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0C2F68.9e-0430.43Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
BLAST of Lcy07g005940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CV631.5e-3058.12uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A803Q3X24.9e-2941.62Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9EFD53.9e-2643.33Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9GAY01.1e-2545.64Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24411 PE=4 SV=1[more]
A0A2N9H5671.1e-2551.61Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
BLAST of Lcy07g005940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145148.13.1e-3058.12uncharacterized protein LOC111014662 [Momordica charantia][more]
XP_030939190.11.8e-2541.89uncharacterized protein LOC115964041 [Quercus lobata][more]
XP_030936294.14.0e-2542.57uncharacterized protein LOC115961454 [Quercus lobata][more]
XP_023889222.15.2e-2548.39LOW QUALITY PROTEIN: uncharacterized protein LOC112001275 [Quercus suber][more]
XP_023913142.15.2e-2541.57uncharacterized protein LOC112024740 [Quercus suber][more]
BLAST of Lcy07g005940 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 2..124
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 2..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g005940.1Lcy07g005940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016740 transferase activity