Lcy07g004430 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g004430
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	Chr07: 22422170 .. 22422784 (+)
RNA-Seq Expression	Lcy07g004430
Synteny	Lcy07g004430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAGAAAAAGAGGTTGAAACGTGTCTTGACTCGAAATGGCCAAAGAGTTTGTTTAACGACTGATACATGGACTTCCGTTCAAAATATTAATTACATGGTGATAACTGCTCATTTTATTGATAGTGAGTGGAACTTGCACAAAAGAATTCTAAATTTTTGTCAAATTGCCAATCATAAAGGAGACACAATAGGAAGAGCAATTGAAAAATGCTTGCAAAGTTGGGGGATTGATAGACTTTTTACCATCACTGTCGATAATGCTAGCTCAAAGGATGTAGCATTGACATATTTGGTTAAAAAGTTTAAAGGAAGAAATGAGTTAGTGTTGGATGGTGAATTTCTCCATGTGCGATGTTCTGCTCCTATTCTTAATTTGATTGTTAGTGATGCTTTAAAGGATTTGCACGTGTCTATCATTCGCATTAGAAATGTTGTGAAGTATGTTAGATCATCTTCTGCAAGATTACAAGCATTTAAAGATTTTGCTAAATTAAAGAAGATAAAATTTCGACCAAAAGTTGTCTTAGTATGGATGTTCAAACATGATGGAATTAAACTTTCACTATGTTGGATGGAGCAATTAAATTTCAAAAGACTTTTGAAAGATTAG

mRNA sequence

ATGAGGGAGAAAAAGAGGTTGAAACGTGTCTTGACTCGAAATGGCCAAAGAGTTTGTTTAACGACTGATACATGGACTTCCGTTCAAAATATTAATTACATGGTGATAACTGCTCATTTTATTGATAGTGAGTGGAACTTGCACAAAAGAATTCTAAATTTTTGTCAAATTGCCAATCATAAAGGAGACACAATAGGAAGAGCAATTGAAAAATGCTTGCAAAGTTGGGGGATTGATAGACTTTTTACCATCACTGTCGATAATGCTAGCTCAAAGGATGTAGCATTGACATATTTGGTTAAAAAGTTTAAAGGAAGAAATGAGTTAGTGTTGGATGGTGAATTTCTCCATGTGCGATGTTCTGCTCCTATTCTTAATTTGATTGTTAGTGATGCTTTAAAGGATTTGCACGTGTCTATCATTCGCATTAGAAATGTTGTGAAGTATGTTAGATCATCTTCTGCAAGATTACAAGCATTTAAAGATTTTGCTAAATTAAAGAAGATAAAATTTCGACCAAAAGTTGTCTTAGTATGGATGTTCAAACATGATGGAATTAAACTTTCACTATGTTGGATGGAGCAATTAAATTTCAAAAGACTTTTGAAAGATTAG

Coding sequence (CDS)

ATGAGGGAGAAAAAGAGGTTGAAACGTGTCTTGACTCGAAATGGCCAAAGAGTTTGTTTAACGACTGATACATGGACTTCCGTTCAAAATATTAATTACATGGTGATAACTGCTCATTTTATTGATAGTGAGTGGAACTTGCACAAAAGAATTCTAAATTTTTGTCAAATTGCCAATCATAAAGGAGACACAATAGGAAGAGCAATTGAAAAATGCTTGCAAAGTTGGGGGATTGATAGACTTTTTACCATCACTGTCGATAATGCTAGCTCAAAGGATGTAGCATTGACATATTTGGTTAAAAAGTTTAAAGGAAGAAATGAGTTAGTGTTGGATGGTGAATTTCTCCATGTGCGATGTTCTGCTCCTATTCTTAATTTGATTGTTAGTGATGCTTTAAAGGATTTGCACGTGTCTATCATTCGCATTAGAAATGTTGTGAAGTATGTTAGATCATCTTCTGCAAGATTACAAGCATTTAAAGATTTTGCTAAATTAAAGAAGATAAAATTTCGACCAAAAGTTGTCTTAGTATGGATGTTCAAACATGATGGAATTAAACTTTCACTATGTTGGATGGAGCAATTAAATTTCAAAAGACTTTTGAAAGATTAG

Protein sequence

MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANHKGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRCSAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKIKFRPKVVLVWMFKHDGIKLSLCWMEQLNFKRLLKD

Homology

[Close]

BLAST of Lcy07g004430 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-24
Identity = 59/166 (35.54%), Postives = 94/166 (56.63%), Query Frame = 0


Query: 2   REKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIAN-H 61
           +EK+ L +  +    R+ LT   WT+ Q + Y+ +   FIDSEW +H+R+LNF  +++ H
Sbjct: 220 KEKENLMQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVSSPH 279

Query: 62  KGDTIGRAIEKCLQSWGI-DRLFTITVDN-ASSKDVALTYLVKKFKGRNELVLDGEFLHV 121
             + +  AI   L  W + D+LFTIT+DN  SS D+    L      +N L+L G+   V
Sbjct: 280 SENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVV 339

Query: 122 RCSAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFA 165
           RC A ILN +  D +  +H  I  IR  +K++++S +R + F + A
Sbjct: 340 RCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSREEKFAEIA 385

[Close]

BLAST of Lcy07g004430 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.9e-23
Identity = 57/166 (34.34%), Postives = 91/166 (54.82%), Query Frame = 0


Query: 2   REKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIAN-H 61
           +EK+ L +       R+ L    WT+ Q + Y+ +   FIDSEW +H+R+LNF  +++ H
Sbjct: 220 KEKENLMQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPH 279

Query: 62  KGDTIGRAIEKCLQSWGI-DRLFTITVDN-ASSKDVALTYLVKKFKGRNELVLDGEFLHV 121
             + +  AI   L  W + D+LFTIT+DN  SS D+    L      +N L+L G+   V
Sbjct: 280 SENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVV 339

Query: 122 RCSAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFA 165
           RC A ILN +  D +  +H  I  IR  +K++++S +  + F + A
Sbjct: 340 RCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSCEEKFAEIA 385

[Close]

BLAST of Lcy07g004430 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21
Identity = 56/170 (32.94%), Postives = 96/170 (56.47%), Query Frame = 0


Query: 2   REKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIAN-H 61
           +E++ L  V +    R+ LT   W + Q + Y+ + A FID+EW +H+R++NF  +++ H
Sbjct: 260 KERENLMHVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPH 319

Query: 62  KGDTIGRAIEKCLQSWGI-DRLFTITVDN-ASSKDV----ALTYLVKKFKGRNELVLDGE 121
             +++  AI   L  W + D+LFTIT+DN  SS D+     + YL  K   ++ +++ G+
Sbjct: 320 SENSLSEAISTSLSDWNMKDKLFTITLDNDPSSHDIYSANMINYLSNK---KDNIMIKGQ 379

Query: 122 FLHVRCSAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFA 165
              VRC A ILN +  D +  +H  I  IR  +K++++SS     F + A
Sbjct: 380 LFVVRCYAHILNTVAQDVIASVHSVIYHIRESIKFIKASSVHEDKFAEIA 426

[Close]

BLAST of Lcy07g004430 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-21
Identity = 57/156 (36.54%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQI-AN 60
           + EK++L   L     R   T D WTS QN +YM +T H+ID +W L KRI+ F  +   
Sbjct: 279 LEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGR 338

Query: 61  HKGDTIGRAIEKCLQSWGID-RLFTITVDNASSKDVALTYLVKKFKGR-NELVLDGEFLH 120
           H G  + +     +  W I+ +LF +++DNAS+ +VA+  +++  +   + LV DG F H
Sbjct: 339 HTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFH 398

Query: 121 VRCSAPILNLIVSDALKDLHVSIIRIRNVVKYVRSS 154
           VRC+  ILNL+  D L  +  +I +I+ +V  V+SS
Sbjct: 399 VRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSS 434

[Close]

BLAST of Lcy07g004430 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-21
Identity = 57/156 (36.54%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQI-AN 60
           + EK++L   L     R   T D WTS QN +YM +T H+ID +W L KRI+ F  +   
Sbjct: 224 LEEKEKLYGKLKDVQSRFSTTMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGR 283

Query: 61  HKGDTIGRAIEKCLQSWGID-RLFTITVDNASSKDVALTYLVKKFKGR-NELVLDGEFLH 120
           H G  + +     +  W I+ +LF +++DNAS+ +VA+  +++  +   + LV DG F H
Sbjct: 284 HTGQRLSQTFTAIMVKWNIEKKLFALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFH 343

Query: 121 VRCSAPILNLIVSDALKDLHVSIIRIRNVVKYVRSS 154
           VRC+  ILNL+  D L  +  +I +I+ +V  V+SS
Sbjct: 344 VRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSS 379

[Close]

BLAST of Lcy07g004430 vs. ExPASy TrEMBL
Match: A0A5D3C2L4 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00130 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 158 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 217

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 218 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 277

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 278 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 326

[Close]

BLAST of Lcy07g004430 vs. ExPASy TrEMBL
Match: A0A5D3E590 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001030 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 158 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 217

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 218 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 277

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 278 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 326

[Close]

BLAST of Lcy07g004430 vs. ExPASy TrEMBL
Match: A0A5A7SNJ1 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001460 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 186 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 245

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 246 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 305

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 306 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 354

[Close]

BLAST of Lcy07g004430 vs. ExPASy TrEMBL
Match: A0A5D3E4G3 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001240 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 186 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 245

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 246 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 305

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 306 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 354

[Close]

BLAST of Lcy07g004430 vs. ExPASy TrEMBL
Match: D0UIX2 (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.6e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 158 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 217

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 218 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 277

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 278 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 326

[Close]

BLAST of Lcy07g004430 vs. NCBI nr
Match: KAA0026183.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 186 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 245

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 246 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 305

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 306 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 354

[Close]

BLAST of Lcy07g004430 vs. NCBI nr
Match: TYK30776.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 186 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 245

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 246 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 305

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 306 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 354

[Close]

BLAST of Lcy07g004430 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 158 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 217

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 218 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 277

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 278 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 326

[Close]

BLAST of Lcy07g004430 vs. NCBI nr
Match: TYK06161.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 158 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 217

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 218 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 277

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 278 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 326

[Close]

BLAST of Lcy07g004430 vs. NCBI nr
Match: TYK30761.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-77
Identity = 144/169 (85.21%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           M+EKK+LK  LTR+GQRVCLTTDTWTSVQNINYMVITAHFID +WNLHKRILNFCQ+ANH
Sbjct: 158 MKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQVANH 217

Query: 61  KGDTIGRAIEKCLQSWGIDRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRC 120
           KGDTIGRAIEKCL+ WGIDRLFT+TVDNASS DVA+ YLVKKFKGRN LVLDGEF+H+RC
Sbjct: 218 KGDTIGRAIEKCLEGWGIDRLFTVTVDNASSNDVAIAYLVKKFKGRNGLVLDGEFIHIRC 277

Query: 121 SAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKLKKI 170
            A ILNLIVSDALKDLHVSIIRIRN VKYVRSS ARLQ FKDFAK  K+
Sbjct: 278 CAHILNLIVSDALKDLHVSIIRIRNAVKYVRSSPARLQIFKDFAKEDKM 326

[Close]

BLAST of Lcy07g004430 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 85.1 bits (209), Expect = 7.1e-17
Identity = 49/164 (29.88%), Postives = 88/164 (53.66%), Query Frame = 0


Query: 1   MREKKRLKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANH 60
           + EK+ + + L     R CLT D WTS   + Y+ ITAH+IDS+W + K++LN    +  
Sbjct: 216 LAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYP 275

Query: 61  KGD-TIGRAIEKCLQSWGID-RLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHV 120
           + D  +  A+  C+  WG++ +LF +T ++ +S   A+  +  +   +N  +LDG+ +  
Sbjct: 276 EADEALSLAVANCVSEWGLEGKLFNVTFNHPASNS-AVENIRPQLCIKNPGILDGQLVIG 335

Query: 121 RCSAPILNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKD 163
            C A     +  D L+     I  IR+ VK+V++S +  + F +
Sbjct: 336 NCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTE 378

[Close]

BLAST of Lcy07g004430 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-12
Identity = 46/162 (28.40%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 7   LKRVLTRNGQRVCLTTDTWTSVQNINYMVITAHFIDSEWNLHKRILNFCQIANHKGDT-I 66
           +K  L     +V +T   W S +NI YM +T  +ID  W+ H+ +L+ C+I    G + I
Sbjct: 194 VKTTLEHIQSKVSVTLSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEI 253

Query: 67  GRAIEKCLQSWGI-DRLFTITVDNASSKDVALTYLVKKFKGRNELVLDGEFLHVRCSAPI 126
             ++ K L+++ I DR+   T DN+ +   A   L + F G+  L     F ++ C+A  
Sbjct: 254 YNSLLKVLKTYAIEDRILCCTHDNSENAIHACHSLKEYFDGQKVL----PFCYIPCAAQT 313

Query: 127 LNLIVSDALKDLHVSIIRIRNVVKYVRSSSARLQAFKDFAKL 167
           LN I+ + L  +   I ++R   ++ +  +A  +   DF +L
Sbjct: 314 LNDIIDEGLATIKPIISKVR---EFTQELNASTELSDDFIQL 348

The following BLAST results are available for this feature:

BLAST of Lcy07g004430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AVI0	1.2e-24	35.54	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	4.9e-23	34.34	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	1.6e-21	32.94	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
P08770	2.1e-21	36.54	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	2.1e-21	36.54	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]

BLAST of Lcy07g004430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2L4	3.6e-77	85.21	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287...	[more]
A0A5D3E590	3.6e-77	85.21	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343...	[more]
A0A5A7SNJ1	3.6e-77	85.21	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G...	[more]
A0A5D3E4G3	3.6e-77	85.21	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343...	[more]
D0UIX2	3.6e-77	85.21	Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]

BLAST of Lcy07g004430 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026183.1	7.4e-77	85.21	putative transposase [Cucumis melo var. makuwa]	[more]
TYK30776.1	7.4e-77	85.21	putative transposase [Cucumis melo var. makuwa]	[more]
ACX85638.1	7.4e-77	85.21	putative transposase [Cucumis melo]	[more]
TYK06161.1	7.4e-77	85.21	putative transposase [Cucumis melo var. makuwa]	[more]
TYK30761.1	7.4e-77	85.21	putative transposase [Cucumis melo var. makuwa]	[more]

BLAST of Lcy07g004430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	7.1e-17	29.88	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	6.8e-12	28.40	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 2..165
None	No IPR available	PANTHER	PTHR23272:SF133	SUBFAMILY NOT NAMED	coord: 2..165
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g004430.1	Lcy07g004430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity