Lcy07g003610 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g003610
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	B3 domain-containing transcription factor VRN1-like
Location	Chr07: 16403435 .. 16405140 (+)
RNA-Seq Expression	Lcy07g003610
Synteny	Lcy07g003610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATGGAAGTTCTTTAATGAGTAACTTGGTTGTTCTTCCAAGTTTACAACTTTAACAGAGAGGATGAGTTTAGAAATTGGACCAAATATTCTGAAAATGAAAGCAATGAGAGGGACTGGATTTGAATAACTGAGCTGACCATTTTCATTTGGTTTGGATGGAGAAGGCATACTTCCCTCATGAAGCTTCACATTGTGATTCTCCATGATCATTTGCAACACTTCTTCATGACTTTAATTTGTTGGTTCTTCTTCTCATTTACATAAATTTGCACTCACTCAAATGCACAGAAGAACTCAAAAATTTCAACAAACAAAAAATCTCTCTGCAATGGCTTTCTTCACTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATTGAAGGAAAACTCGTAAACCAAAACCAAACGAAACAACTTCTCTGAATTTCTTAATTTCTTTTACCAACTTCTCATTCATTACTCAATTTTCCTTTGCAGGATCTTCCCAAGAAGTTCGTCAAGAACGATGGTGATTCTCTGTTACACAGCAAGGCCACTCTCAACCTTCCCGACGGCGCAAAGTGGGAGGTCGAACTGAAGAAATCGGACGGAAAAATCTCGTTTGTGAGAGGCTGGTCGGAATTCGTGAAGTTTTACTCTGTCAAAGCTGGATATTTCGTTGTTTTCGGATGCGAAGGAAATTCCTGCTTCAATGTCCTCATTTTCGACTTGAGTGCTACGGAGATCAATTACCCGATGAAGCCGCGGACCTACCATCGGAAGCCTAAATCAGATCGCAACAGAGGCTTTGATCGCCGGCCGCCTGTTCTGATTCTGAAAAGCGAAAGCGAAGAAGATGAAGAAGACGACTCTGTTCAGATACTGAACGACGAGGTTTTGAGGAAGAGAAGAAGAGAGAAAGACGCGTATTGTTCGCTACGAGAGCTGAAGAAGATGATGAGGAAGAACGTGAAGATGAATCATCGATTCACTACGCCTCAACGATTCAGCGATGAAGAAGATGAAGATGAAGAAGAAGAAGATCTGGAAATGAATTACTCACGGAGACAGAGCAATTACAGAGGATCAGGTTCGTCCGCCAAATTTCTATAAAATTCAGTTTCAGTTTCAGCAATCGCGCAACCAAAATATCATGAATTATTACCGATTTCATCAGCGTATGATTACGGAGATGGCGGGCGATTCAGTCCGGAATCGATGAGACCGGTGGATCGTCGAAGGACGCCGCAGCCATTGACGGAGAATCAAGAGAGAGTTCTACTGAAAGCAAGTGCGTTCAAATTGAGGACGAAGAATCCTTCGTTCATGGTGACGATGAGGCCCTCGTACATCCAAACAGGAAATTACCTGGTAAGAGAAAAAGAACACTGAAATGAAATTGAATCGTTGTTAATTGAAGTTAATTGAAATTGATTTATGGAATGCAGAGCTTGCCGAGGAGCTTCGCGGAGAGGTACCTGAGGGAGTCGGTGGATGTGAAGCTGGAGGTGGCGGACGGAAGGGCATGGAGCGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGGACGGAACTGAAAGGCGGTTGGAAGAGATTCGCTGTGGATAATCGGTTGCAGGAAGGCGACGTCTGTGTGTTCGAGTTGATCAACAAAACCCCCAAAGTCTTTTTCAAAGTCACCATTTTCCATCTTCCTCCTAACTAA

mRNA sequence

AAAAAATGGAAGTTCTTTAATGAGTAACTTGGTTGTTCTTCCAAGTTTACAACTTTAACAGAGAGGATGAGTTTAGAAATTGGACCAAATATTCTGAAAATGAAAGCAATGAGAGGGACTGGATTTGAATAACTGAGCTGACCATTTTCATTTGGTTTGGATGGAGAAGGCATACTTCCCTCATGAAGCTTCACATTGTGATTCTCCATGATCATTTGCAACACTTCTTCATGACTTTAATTTGTTGGTTCTTCTTCTCATTTACATAAATTTGCACTCACTCAAATGCACAGAAGAACTCAAAAATTTCAACAAACAAAAAATCTCTCTGCAATGGCTTTCTTCACTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATTGAAGGAAAACTCGATCTTCCCAAGAAGTTCGTCAAGAACGATGGTGATTCTCTGTTACACAGCAAGGCCACTCTCAACCTTCCCGACGGCGCAAAGTGGGAGGTCGAACTGAAGAAATCGGACGGAAAAATCTCGTTTGTGAGAGGCTGGTCGGAATTCGTGAAGTTTTACTCTGTCAAAGCTGGATATTTCGTTGTTTTCGGATGCGAAGGAAATTCCTGCTTCAATGTCCTCATTTTCGACTTGAGTGCTACGGAGATCAATTACCCGATGAAGCCGCGGACCTACCATCGGAAGCCTAAATCAGATCGCAACAGAGGCTTTGATCGCCGGCCGCCTGTTCTGATTCTGAAAAGCGAAAGCGAAGAAGATGAAGAAGACGACTCTGTTCAGATACTGAACGACGAGGTTTTGAGGAAGAGAAGAAGAGAGAAAGACGCGTATTGTTCGCTACGAGAGCTGAAGAAGATGATGAGGAAGAACGTGAAGATGAATCATCGATTCACTACGCCTCAACGATTCAGCGATGAAGAAGATGAAGATGAAGAAGAAGAAGATCTGGAAATGAATTACTCACGGAGACAGAGCAATTACAGAGGATCAGCGTATGATTACGGAGATGGCGGGCGATTCAGTCCGGAATCGATGAGACCGGTGGATCGTCGAAGGACGCCGCAGCCATTGACGGAGAATCAAGAGAGAGTTCTACTGAAAGCAAGTGCGTTCAAATTGAGGACGAAGAATCCTTCGTTCATGGTGACGATGAGGCCCTCGTACATCCAAACAGGAAATTACCTGAGCTTGCCGAGGAGCTTCGCGGAGAGGTACCTGAGGGAGTCGGTGGATGTGAAGCTGGAGGTGGCGGACGGAAGGGCATGGAGCGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGGACGGAACTGAAAGGCGGTTGGAAGAGATTCGCTGTGGATAATCGGTTGCAGGAAGGCGACGTCTGTGTGTTCGAGTTGATCAACAAAACCCCCAAAGTCTTTTTCAAAGTCACCATTTTCCATCTTCCTCCTAACTAA

Coding sequence (CDS)

ATGCACAGAAGAACTCAAAAATTTCAACAAACAAAAAATCTCTCTGCAATGGCTTTCTTCACTTCCCCAAATCCCCATTTCTTCAAGATCATTCTCCACCACACTCTCATTGAAGGAAAACTCGATCTTCCCAAGAAGTTCGTCAAGAACGATGGTGATTCTCTGTTACACAGCAAGGCCACTCTCAACCTTCCCGACGGCGCAAAGTGGGAGGTCGAACTGAAGAAATCGGACGGAAAAATCTCGTTTGTGAGAGGCTGGTCGGAATTCGTGAAGTTTTACTCTGTCAAAGCTGGATATTTCGTTGTTTTCGGATGCGAAGGAAATTCCTGCTTCAATGTCCTCATTTTCGACTTGAGTGCTACGGAGATCAATTACCCGATGAAGCCGCGGACCTACCATCGGAAGCCTAAATCAGATCGCAACAGAGGCTTTGATCGCCGGCCGCCTGTTCTGATTCTGAAAAGCGAAAGCGAAGAAGATGAAGAAGACGACTCTGTTCAGATACTGAACGACGAGGTTTTGAGGAAGAGAAGAAGAGAGAAAGACGCGTATTGTTCGCTACGAGAGCTGAAGAAGATGATGAGGAAGAACGTGAAGATGAATCATCGATTCACTACGCCTCAACGATTCAGCGATGAAGAAGATGAAGATGAAGAAGAAGAAGATCTGGAAATGAATTACTCACGGAGACAGAGCAATTACAGAGGATCAGCGTATGATTACGGAGATGGCGGGCGATTCAGTCCGGAATCGATGAGACCGGTGGATCGTCGAAGGACGCCGCAGCCATTGACGGAGAATCAAGAGAGAGTTCTACTGAAAGCAAGTGCGTTCAAATTGAGGACGAAGAATCCTTCGTTCATGGTGACGATGAGGCCCTCGTACATCCAAACAGGAAATTACCTGAGCTTGCCGAGGAGCTTCGCGGAGAGGTACCTGAGGGAGTCGGTGGATGTGAAGCTGGAGGTGGCGGACGGAAGGGCATGGAGCGTGTGGTGCGGCGTGCGGTGGGCGTTCACGCGGCGGCGGACGGAACTGAAAGGCGGTTGGAAGAGATTCGCTGTGGATAATCGGTTGCAGGAAGGCGACGTCTGTGTGTTCGAGTTGATCAACAAAACCCCCAAAGTCTTTTTCAAAGTCACCATTTTCCATCTTCCTCCTAACTAA

Protein sequence

MHRRTQKFQQTKNLSAMAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKDAYCSLRELKKMMRKNVKMNHRFTTPQRFSDEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN

Homology

[Close]

BLAST of Lcy07g003610 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.5e-32
Identity = 121/370 (32.70%), Postives = 176/370 (47.57%), Query Frame = 0


Query: 23  PNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKIS 82
           P P F K+I   T+ E +L +P KFV    D L  + A L +PDG  W V L+K+D KI 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIW 61

Query: 83  FVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKPKSDRN 142
           F  GW EFV  YS++ GY ++F  EGNS F+V IF+LS +EIN       YH     D  
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEIN-------YHSTGLMDSA 121

Query: 143 RGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE-----KDAYCSLRELKKMMRK 202
               +R  +       E+ E++D+  I    V      E        Y S   ++ +   
Sbjct: 122 HNHFKRARLF------EDLEDEDAEVIFPSSVYPSPLPESTVPANKGYAS-SAIQTLFTG 181

Query: 203 NVKMNHRFTTPQRFSDEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVD 262
            VK      TP+       + +  +  E+N S  + +      D  +  +F   +     
Sbjct: 182 PVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDD------DPENRSKFYESASA--- 241

Query: 263 RRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE- 322
           R+RT     E +ER +  A  F+    NP F V +RPSY+  G  + LP  FAE+YL   
Sbjct: 242 RKRT--VTAEERERAINAAKTFE--PTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI 301

Query: 323 SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPK 382
           S  +K+++A+ + W V C     +   R +   GW  F ++N L EGDVCVFEL+ +T  
Sbjct: 302 SGFIKVQLAE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELL-RTRD 337

Query: 383 VFFKVTIFHL 387
              KVT F +
Sbjct: 362 FVLKVTAFRV 337

[Close]

BLAST of Lcy07g003610 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-15
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 27  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRG 86
           F KIIL   +IE  + +P +FV+      L    TL  P G K  + +K+   ++ F +G
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR--FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 93

Query: 87  WSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKP-KSDRNRGF 146
           WSEF + +S+  G+F+ F  EG+SCF V+IFD+SA+EI YP+     +R+    D  +GF
Sbjct: 94  WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGF 153

Query: 147 DRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE 182
                         E  +DD   +  DE+L+K++++
Sbjct: 154 -----------TGFESSDDDGEVVDMDELLKKKKKK 176

[Close]

BLAST of Lcy07g003610 vs. ExPASy Swiss-Prot
Match: Q2R9D2 (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.2e-15
Identity = 99/390 (25.38%), Postives = 164/390 (42.05%), Query Frame = 0


Query: 27  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKAT--LNLPD--GAKWEVELKKSDGKIS 86
           FF+++L    +E ++ +P  F     +  L ++ T  ++L D  G KW  EL        
Sbjct: 32  FFRVLLTLQSLE-RMKIPSSF-----NQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFF 91

Query: 87  FVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKP----- 146
           FV GW EFV+  S++ G F+VF  +  S F+V +F+ S  +     K  T+   P     
Sbjct: 92  FVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGID-----KISTFSAHPSKNVI 151

Query: 147 -KSDRNRG--------FDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKDAYCSL 206
            K++ + G         ++  P L   +        D   ++ D V+  ++  +   C  
Sbjct: 152 IKTESDEGGMVTAAITTEKMAPALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCES 211

Query: 207 RELKKM-----MRKNVKMNHRFTTPQRFSDEEDEDEEEE---DLEMNYSRRQSNYRGSAY 266
              K+        K    +H  T     S +ED    +       M +   + + RG   
Sbjct: 212 SRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCV 271

Query: 267 DYGDGGRFSPESMRPVDRRRTPQPLTE-NQERVLLKASAFKLRTKNPSFMVTMRPSYIQT 326
             G         +  + +RR   P+TE  ++  L +A  FK  +KNP  +  M  SY+  
Sbjct: 272 SKGQ------RQLTVISQRR---PVTEAEKDHALQRAREFK--SKNPFAVQIMMESYVYV 331

Query: 327 GNYLSLPRSFAERYL-RESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDN 386
           G ++++P  F    L   +  + L    G+AW V     +   R      GGW +FAV N
Sbjct: 332 GFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEV--NYVYYSDRSVGSFSGGWGKFAVGN 391

Query: 387 RLQEGDVCVFELINKTPKVFFKVTIFHLPP 389
            L++ DVCVFEL+ K      KV I+ + P
Sbjct: 392 NLEKFDVCVFELVQKDN---IKVHIYRVVP 394

[Close]

BLAST of Lcy07g003610 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.2e-15
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 2   HRRTQKFQQTKNLSAMAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKAT 61
           HRR+Q+  +           SP   FFK++L  T+ +  + +P +FVK  G S L    T
Sbjct: 16  HRRSQQDPE-----------SPVKKFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVT 75

Query: 62  LNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA 121
           L  P G K  ++LK+   +I F  GWSEF + +S++ G+F++F  + NS F V+IF++SA
Sbjct: 76  LETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSA 130

Query: 122 TEINYPM 129
            E  YP+
Sbjct: 136 CETKYPL 130

[Close]

BLAST of Lcy07g003610 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.2e-15
Identity = 55/164 (33.54%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 22  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKI 81
           SP   FFK++L  T+ +  + +P +FVK  G S L    TL  P G K  ++LK+   +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 82  SFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKP----------- 141
            F  GWSEF + +S++ G+F++F  + NS F V+IF+ SA E NYP+             
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDDVI 144

Query: 142 -------RTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSV 168
                   T H+  K  R+  FD+    + +    +E+EED  V
Sbjct: 145 EITGKEFDTEHKSKKRPRDIEFDKILHDVDVMQVLKEEEEDKRV 187

[Close]

BLAST of Lcy07g003610 vs. ExPASy TrEMBL
Match: A0A6J1G5F5 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451014 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 5.1e-157
Identity = 292/390 (74.87%), Postives = 326/390 (83.59%), Query Frame = 0


Query: 17  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKK 76
           MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 95

Query: 77  SDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRK 136
           SDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLIFDLSATEI+YP+KPR + R+
Sbjct: 96  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIF-RR 155

Query: 137 PKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKK 196
            + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KK
Sbjct: 156 LRKDHTRAFDRRPPILLPKSEN-EDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKK 215

Query: 197 MMRKNVKMNH-RFTTPQRFSDEEDEDE-------------EEEDLEMNYSRRQSNYRGSA 256
           MMR N+K+ H RFTTPQRFSD+E+EDE             EE+D E +YS RQ  YRGSA
Sbjct: 216 MMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEDEDEEEEEDEEDDEEEDYSWRQRKYRGSA 275

Query: 257 YDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQT 316
            ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQT
Sbjct: 276 RNHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQT 335

Query: 317 GNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNR 376
           GNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+
Sbjct: 336 GNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQ 395

Query: 377 LQEGDVCVFELINKTPKVFFKVTIFHLPPN 390
           L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 396 LKEGDVCVFELMNRIPKVFFKVTIFRRPAN 423

[Close]

BLAST of Lcy07g003610 vs. ExPASy TrEMBL
Match: A0A6J1L7I9 (B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 GN=LOC111499897 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 8.8e-157
Identity = 292/407 (71.74%), Postives = 335/407 (82.31%), Query Frame = 0


Query: 1   MHRRTQKFQQTKNLSAMAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKA 60
           ++ + +  ++ K    MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ A
Sbjct: 20  INNKQKPIRKHKQSLRMAFFTSPIPHFFKIILHHTLIERKLDLPSKFVINNRASLLHNNA 79

Query: 61  TLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLS 120
           TL+LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLIFDLS
Sbjct: 80  TLSLPDGANWEVELKKSDGKVSFARGWPEFVQFYNVKAGYFVVFRLEGNRCFNVLIFDLS 139

Query: 121 ATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRR 180
           ATEI+YP+KPR + R+ + D NR FDRRPP+L+ KSE+ ED+ED+SV +LND V RKR+R
Sbjct: 140 ATEIDYPIKPRIF-RRLRKDHNRAFDRRPPILLPKSEN-EDDEDNSVVVLNDAVSRKRKR 199

Query: 181 EKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS--------------DEEDEDEEEE 240
           EKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS              DEEDE++EE+
Sbjct: 200 EKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEEEEEEDEEDEEDEED 259

Query: 241 DLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLR 300
           + E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLR
Sbjct: 260 EEEEDYSWRQRKYRGSARNHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLR 319

Query: 301 TKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTR 360
           TKNPSFMVTMRPSYIQTGNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTR
Sbjct: 320 TKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTR 379

Query: 361 RRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN 390
           RRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 380 RRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 424

[Close]

BLAST of Lcy07g003610 vs. ExPASy TrEMBL
Match: A0A6J1G597 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451014 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 4.5e-153
Identity = 292/413 (70.70%), Postives = 326/413 (78.93%), Query Frame = 0


Query: 17  MAFFTSPNPHFFKIILHHTLIEGKL-----------------------DLPKKFVKNDGD 76
           MAFFTSP PHFFKIILHHTLIE KL                       DLP KFV N+  
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLVSNLIQSTFSLIPSFSYQFLFLQDLPNKFVINNRA 95

Query: 77  SLLHSKATLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFN 136
           SLLH+ ATL LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFN
Sbjct: 96  SLLHNNATLTLPDGANWEVELKKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFN 155

Query: 137 VLIFDLSATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDE 196
           VLIFDLSATEI+YP+KPR + R+ + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND 
Sbjct: 156 VLIFDLSATEIDYPIKPRIF-RRLRKDHTRAFDRRPPILLPKSEN-EDDEDDSVVVLNDA 215

Query: 197 VLRKRRREKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFSDEEDEDE---------- 256
           V RKR+REKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFSD+E+EDE          
Sbjct: 216 VSRKRKREKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEDEDEEE 275

Query: 257 ---EEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKA 316
              EE+D E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  A
Sbjct: 276 EEDEEDDEEEDYSWRQRKYRGSARNHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIA 335

Query: 317 SAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGV 376
           S+FKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGV
Sbjct: 336 SSFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGV 395

Query: 377 RWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN 390
           RWAFTRRRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 396 RWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 446

[Close]

BLAST of Lcy07g003610 vs. ExPASy TrEMBL
Match: A0A6J1DVA1 (B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=3673 GN=LOC111024767 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.9e-143
Identity = 275/385 (71.43%), Postives = 311/385 (80.78%), Query Frame = 0


Query: 18  AFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKS 77
           +FFTS  PHFFKIILH  LIEGKL+LPKKFV N+G SLL   A+L LP GAKWEVELKKS
Sbjct: 3   SFFTSETPHFFKIILHQNLIEGKLELPKKFVMNNGGSLLQRTASLRLPSGAKWEVELKKS 62

Query: 78  DGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMK-PRTYHRK 137
           DGK+ F RGW EFV+FYSVK GYFVVF  EGN CFNV+IFDLSATE++YP+   R ++R 
Sbjct: 63  DGKVWFGRGWPEFVEFYSVKLGYFVVFRYEGNCCFNVVIFDLSATEMDYPVPLKRIFNR- 122

Query: 138 PKSDRNRGFDRRPPVLILKSESEEDEEDD-SVQILNDEVLRKRRREKD----AYCSLREL 197
               RNRGFDRR P+L+ K E EED++DD SV++LN  V RKR RE+D     YCSLR++
Sbjct: 123 ----RNRGFDRRQPLLVPKIEDEEDDDDDGSVRMLNG-VSRKRMRERDQEAPVYCSLRKM 182

Query: 198 KKMMRKNVKMNHRFTTPQRFSD------EEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDG 257
           KKMMR+ VK+  RFTTPQRF+D      EEDE+EEEEDLEMNYSRRQ+NYR S  ++  G
Sbjct: 183 KKMMRQTVKIKRRFTTPQRFNDDGDEEEEEDEEEEEEDLEMNYSRRQNNYRAS--NHRSG 242

Query: 258 GRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSL 317
           GRFSPESMRP    R PQPLTENQER+L +ASAFK  T+NPSFMVTMRPSYIQTGNYLSL
Sbjct: 243 GRFSPESMRPEQPPRIPQPLTENQERLLRRASAFKFATRNPSFMVTMRPSYIQTGNYLSL 302

Query: 318 PRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDV 377
           PRSFAERYL+ESVDVKLE ADGR WSVWCGVRWAFTRRRTELK GWK FAV+N LQEGD+
Sbjct: 303 PRSFAERYLKESVDVKLEAADGRIWSVWCGVRWAFTRRRTELKAGWKNFAVENDLQEGDI 362

Query: 378 CVFELINK-TPKVFFKVTIFHLPPN 390
           CVFELIN+ T KV F+VTIF  P N
Sbjct: 363 CVFELINRSTTKVLFRVTIFRRPDN 379

[Close]

BLAST of Lcy07g003610 vs. ExPASy TrEMBL
Match: A0A1S3C614 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497436 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 8.8e-133
Identity = 247/377 (65.52%), Postives = 289/377 (76.66%), Query Frame = 0


Query: 17  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKK 76
           M  F SPNPHFFKIILH  L + KLDLP KFVKN+GDSLL +   L+LPDGAKW  +L K
Sbjct: 1   MGSFISPNPHFFKIILHQNLTQQKLDLPNKFVKNNGDSLLFNHVALSLPDGAKWNFQLMK 60

Query: 77  SDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRK 136
            DGK  F+RGW EFVKFYS++ GYF+VF  +G  CFNVLIFD SATEI+YPM        
Sbjct: 61  LDGKFCFLRGWPEFVKFYSIQPGYFLVFQLKGICCFNVLIFDTSATEIDYPM-------- 120

Query: 137 PKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRR------EKDAYCSLRE 196
                     RRPPVLI KSESE++EE  S+ IL++  L+KR+R      E  AYCSLR+
Sbjct: 121 ----------RRPPVLIPKSESEDEEE--SIHILHEAALKKRKRMEKKEKETSAYCSLRK 180

Query: 197 LKKMMRKNVKMNHRFTTPQRFSDEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSP 256
           +KK M   +  +  FTTPQ FSDE+++++E+EDLE NYS RQ+NYRGSAY+  + GR SP
Sbjct: 181 MKKNMEIKIMKHREFTTPQVFSDEDEDEDEDEDLETNYSPRQTNYRGSAYNESEDGRSSP 240

Query: 257 ESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFA 316
           ESMRP++ R+ PQ LTENQ  VL +AS+FK RTKNPSFMVTMRPSYIQTGN LSLPR F+
Sbjct: 241 ESMRPMNPRKAPQVLTENQLVVLRRASSFKCRTKNPSFMVTMRPSYIQTGNCLSLPRIFS 300

Query: 317 ERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFEL 376
           ERY++ES+DVKLEV DGR W VWCGVRWAFTRRRTELKGGWKRFAVDN L+EGD+CVFEL
Sbjct: 301 ERYIKESMDVKLEVGDGRIWKVWCGVRWAFTRRRTELKGGWKRFAVDNELEEGDICVFEL 357

Query: 377 INKTPKVFFKVTIFHLP 388
           INKTPKV F VTIF LP
Sbjct: 361 INKTPKVHFHVTIFRLP 357

[Close]

BLAST of Lcy07g003610 vs. NCBI nr
Match: KAG6605261.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 564.7 bits (1454), Expect = 6.2e-157
Identity = 292/385 (75.84%), Postives = 325/385 (84.42%), Query Frame = 0


Query: 17  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKK 76
           MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKK
Sbjct: 1   MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 60

Query: 77  SDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRK 136
           SDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLIFDLSATEI+YP+KPR + R+
Sbjct: 61  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIF-RR 120

Query: 137 PKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKK 196
            + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KK
Sbjct: 121 LRKDHTRAFDRRPPILLPKSEN-EDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKK 180

Query: 197 MMRKNVKMNH-RFTTPQRFSDEEDEDE--------EEEDLEMNYSRRQSNYRGSAYDYGD 256
           MMR N+K+ H RFTTPQRFSD+E+EDE        EE+D E +YS RQ  YRGSA +  D
Sbjct: 181 MMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQED 240

Query: 257 GGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLS 316
           GGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQTGNYLS
Sbjct: 241 GGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLS 300

Query: 317 LPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGD 376
           LPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGD
Sbjct: 301 LPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGD 360

Query: 377 VCVFELINKTPKVFFKVTIFHLPPN 390
           VCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 361 VCVFELMNRIPKVFFKVTIFRRPAN 383

[Close]

BLAST of Lcy07g003610 vs. NCBI nr
Match: XP_022947008.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 563.9 bits (1452), Expect = 1.1e-156
Identity = 292/390 (74.87%), Postives = 326/390 (83.59%), Query Frame = 0


Query: 17  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKK 76
           MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 95

Query: 77  SDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRK 136
           SDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLIFDLSATEI+YP+KPR + R+
Sbjct: 96  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIF-RR 155

Query: 137 PKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKK 196
            + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KK
Sbjct: 156 LRKDHTRAFDRRPPILLPKSEN-EDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKK 215

Query: 197 MMRKNVKMNH-RFTTPQRFSDEEDEDE-------------EEEDLEMNYSRRQSNYRGSA 256
           MMR N+K+ H RFTTPQRFSD+E+EDE             EE+D E +YS RQ  YRGSA
Sbjct: 216 MMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEDEDEEEEEDEEDDEEEDYSWRQRKYRGSA 275

Query: 257 YDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQT 316
            ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQT
Sbjct: 276 RNHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQT 335

Query: 317 GNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNR 376
           GNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+
Sbjct: 336 GNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQ 395

Query: 377 LQEGDVCVFELINKTPKVFFKVTIFHLPPN 390
           L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 396 LKEGDVCVFELMNRIPKVFFKVTIFRRPAN 423

[Close]

BLAST of Lcy07g003610 vs. NCBI nr
Match: XP_023007388.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita maxima])

HSP 1 Score: 563.1 bits (1450), Expect = 1.8e-156
Identity = 292/407 (71.74%), Postives = 335/407 (82.31%), Query Frame = 0


Query: 1   MHRRTQKFQQTKNLSAMAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKA 60
           ++ + +  ++ K    MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ A
Sbjct: 20  INNKQKPIRKHKQSLRMAFFTSPIPHFFKIILHHTLIERKLDLPSKFVINNRASLLHNNA 79

Query: 61  TLNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLS 120
           TL+LPDGA WEVELKKSDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLIFDLS
Sbjct: 80  TLSLPDGANWEVELKKSDGKVSFARGWPEFVQFYNVKAGYFVVFRLEGNRCFNVLIFDLS 139

Query: 121 ATEINYPMKPRTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRR 180
           ATEI+YP+KPR + R+ + D NR FDRRPP+L+ KSE+ ED+ED+SV +LND V RKR+R
Sbjct: 140 ATEIDYPIKPRIF-RRLRKDHNRAFDRRPPILLPKSEN-EDDEDNSVVVLNDAVSRKRKR 199

Query: 181 EKD---AYCSLRELKKMMRKNVKMNH-RFTTPQRFS--------------DEEDEDEEEE 240
           EKD   A+CSLRE+KKMMR N+K+ H RFTTPQRFS              DEEDE++EE+
Sbjct: 200 EKDHEAAFCSLREMKKMMRTNMKIKHQRFTTPQRFSDDEEEDEDEEEEEEDEEDEEDEED 259

Query: 241 DLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLR 300
           + E +YS RQ  YRGSA ++ DGGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLR
Sbjct: 260 EEEEDYSWRQRKYRGSARNHEDGGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLR 319

Query: 301 TKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTR 360
           TKNPSFMVTMRPSYIQTGNYLSLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTR
Sbjct: 320 TKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTR 379

Query: 361 RRTELKGGWKRFAVDNRLQEGDVCVFELINKTPKVFFKVTIFHLPPN 390
           RRTELK GWKRFAVDN+L+EGDVCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 380 RRTELKCGWKRFAVDNQLKEGDVCVFELMNRIPKVFFKVTIFRRPAN 424

[Close]

BLAST of Lcy07g003610 vs. NCBI nr
Match: KAG7035223.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 563.1 bits (1450), Expect = 1.8e-156
Identity = 291/385 (75.58%), Postives = 324/385 (84.16%), Query Frame = 0


Query: 17   MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKK 76
            MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL LPDGA WEVELKK
Sbjct: 906  MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNNATLTLPDGANWEVELKK 965

Query: 77   SDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRK 136
            SDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLIFDLSATEI+YP+KPR + R+
Sbjct: 966  SDGKVSFTRGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEIDYPIKPRIF-RR 1025

Query: 137  PKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKK 196
             + D  R FDRRPP+L+ KSE+ ED+EDDSV +LND V RKR+REKD   A+CSLRE+KK
Sbjct: 1026 LRKDHTRAFDRRPPILLPKSEN-EDDEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKK 1085

Query: 197  MMRKNVKMNH-RFTTPQRFSDEEDEDE--------EEEDLEMNYSRRQSNYRGSAYDYGD 256
            MMR N+K+ H RFTTPQRFSD+E+EDE        EE+D E +YS RQ  YRGSA +  D
Sbjct: 1086 MMRTNMKIKHQRFTTPQRFSDDEEEDEDEDEEEEDEEDDEEEDYSWRQRKYRGSARNQED 1145

Query: 257  GGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLS 316
            GGRFSPESMRP+   RTP+PLTENQERVL  AS+FKLRTKNPSFMVTMRPSYIQTGNYLS
Sbjct: 1146 GGRFSPESMRPMHPPRTPKPLTENQERVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYLS 1205

Query: 317  LPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGD 376
            LPRSFAERYL+ES DVKLEV DGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EGD
Sbjct: 1206 LPRSFAERYLQESTDVKLEVTDGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEGD 1265

Query: 377  VCVFELINKTPKVFFKVTIFHLPPN 390
            VCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 1266 VCVFELMNRIPKVFFKVTIFRRPAN 1288

[Close]

BLAST of Lcy07g003610 vs. NCBI nr
Match: XP_023532571.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.5 bits (1443), Expect = 1.2e-155
Identity = 288/386 (74.61%), Postives = 327/386 (84.72%), Query Frame = 0


Query: 17  MAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKK 76
           MAFFTSP PHFFKIILHHTLIE KLDLP KFV N+  SLLH+ ATL+LPDGA WEVELKK
Sbjct: 36  MAFFTSPIPHFFKIILHHTLIERKLDLPNKFVINNRASLLHNSATLSLPDGANWEVELKK 95

Query: 77  SDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRK 136
           SDGK+SF RGW EFV+FY+VKAGYFVVF  EGN CFNVLIFDLSATE++YP+KPR + R+
Sbjct: 96  SDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCFNVLIFDLSATEVDYPIKPRIF-RR 155

Query: 137 PKSDRNRGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRREKD---AYCSLRELKK 196
            + DRN  FDRRPP+L+ KSE+E  +EDDSV +LND V RKR+REKD   A+CSLRE+KK
Sbjct: 156 LRKDRNIAFDRRPPILLPKSENE--DEDDSVVVLNDAVSRKRKREKDHEAAFCSLREMKK 215

Query: 197 MMRKNVKMNH-RFTTPQRFSDEEDEDE---------EEEDLEMNYSRRQSNYRGSAYDYG 256
           MMR N+K+ H RFTTPQRFSD+++EDE         EE+D E +YS R+  YRGSA ++ 
Sbjct: 216 MMRTNMKIKHQRFTTPQRFSDDDEEDEDEDEEEEEDEEDDEEEDYSWRRRKYRGSARNHE 275

Query: 257 DGGRFSPESMRPVDRRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYL 316
           DGGRFSPESMRP+   RTP+PLTENQ+RVL  AS+FKLRTKNPSFMVTMRPSYIQTGNYL
Sbjct: 276 DGGRFSPESMRPMHPPRTPKPLTENQDRVLRIASSFKLRTKNPSFMVTMRPSYIQTGNYL 335

Query: 317 SLPRSFAERYLRESVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEG 376
           SLPRSFAERYL+ES DVKLEVADGR WSVWCGVRWAFTRRRTELK GWKRFAVDN+L+EG
Sbjct: 336 SLPRSFAERYLQESTDVKLEVADGRIWSVWCGVRWAFTRRRTELKCGWKRFAVDNQLKEG 395

Query: 377 DVCVFELINKTPKVFFKVTIFHLPPN 390
           DVCVFEL+N+ PKVFFKVTIF  P N
Sbjct: 396 DVCVFELMNRIPKVFFKVTIFRRPAN 418

[Close]

BLAST of Lcy07g003610 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 139.4 bits (350), Expect = 6.0e-33
Identity = 121/370 (32.70%), Postives = 176/370 (47.57%), Query Frame = 0


Query: 23  PNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKIS 82
           P P F K+I   T+ E +L +P KFV    D L  + A L +PDG  W V L+K+D KI 
Sbjct: 2   PRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVA-LTVPDGHVWRVGLRKADNKIW 61

Query: 83  FVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKPKSDRN 142
           F  GW EFV  YS++ GY ++F  EGNS F+V IF+LS +EIN       YH     D  
Sbjct: 62  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEIN-------YHSTGLMDSA 121

Query: 143 RGFDRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE-----KDAYCSLRELKKMMRK 202
               +R  +       E+ E++D+  I    V      E        Y S   ++ +   
Sbjct: 122 HNHFKRARLF------EDLEDEDAEVIFPSSVYPSPLPESTVPANKGYAS-SAIQTLFTG 181

Query: 203 NVKMNHRFTTPQRFSDEEDEDEEEEDLEMNYSRRQSNYRGSAYDYGDGGRFSPESMRPVD 262
            VK      TP+       + +  +  E+N S  + +      D  +  +F   +     
Sbjct: 182 PVKAEEPTPTPKIPKKRGRKKKNADPEEINSSAPRDD------DPENRSKFYESASA--- 241

Query: 263 RRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE- 322
           R+RT     E +ER +  A  F+    NP F V +RPSY+  G  + LP  FAE+YL   
Sbjct: 242 RKRT--VTAEERERAINAAKTFE--PTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI 301

Query: 323 SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPK 382
           S  +K+++A+ + W V C     +   R +   GW  F ++N L EGDVCVFEL+ +T  
Sbjct: 302 SGFIKVQLAE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELL-RTRD 337

Query: 383 VFFKVTIFHL 387
              KVT F +
Sbjct: 362 FVLKVTAFRV 337

[Close]

BLAST of Lcy07g003610 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.3e-16
Identity = 53/156 (33.97%), Postives = 85/156 (54.49%), Query Frame = 0


Query: 27  FFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKISFVRG 86
           F KIIL   +IE  + +P +FV+      L    TL  P G K  + +K+   ++ F +G
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR--FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKG 93

Query: 87  WSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKPRTYHRKP-KSDRNRGF 146
           WSEF + +S+  G+F+ F  EG+SCF V+IFD+SA+EI YP+     +R+    D  +GF
Sbjct: 94  WSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGF 153

Query: 147 DRRPPVLILKSESEEDEEDDSVQILNDEVLRKRRRE 182
                         E  +DD   +  DE+L+K++++
Sbjct: 154 -----------TGFESSDDDGEVVDMDELLKKKKKK 176

[Close]

BLAST of Lcy07g003610 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-16
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 2   HRRTQKFQQTKNLSAMAFFTSPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKAT 61
           HRR+Q+  +           SP   FFK++L  T+ +  + +P +FVK  G S L    T
Sbjct: 16  HRRSQQDPE-----------SPVKKFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVT 75

Query: 62  LNLPDGAKWEVELKKSDGKISFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSA 121
           L  P G K  ++LK+   +I F  GWSEF + +S++ G+F++F  + NS F V+IF++SA
Sbjct: 76  LETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSA 130

Query: 122 TEINYPM 129
            E  YP+
Sbjct: 136 CETKYPL 130

[Close]

BLAST of Lcy07g003610 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-16
Identity = 55/164 (33.54%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 22  SPNPHFFKIILHHTLIEGKLDLPKKFVKNDGDSLLHSKATLNLPDGAKWEVELKKSDGKI 81
           SP   FFK++L  T+ +  + +P +FVK  G S L    TL  P G K  ++LK+   +I
Sbjct: 25  SPVKKFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEI 84

Query: 82  SFVRGWSEFVKFYSVKAGYFVVFGCEGNSCFNVLIFDLSATEINYPMKP----------- 141
            F  GWSEF + +S++ G+F++F  + NS F V+IF+ SA E NYP+             
Sbjct: 85  WFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDDVI 144

Query: 142 -------RTYHRKPKSDRNRGFDRRPPVLILKSESEEDEEDDSV 168
                   T H+  K  R+  FD+    + +    +E+EED  V
Sbjct: 145 EITGKEFDTEHKSKKRPRDIEFDKILHDVDVMQVLKEEEEDKRV 187

[Close]

BLAST of Lcy07g003610 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-13
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 258 RRRTPQPLTENQERVLLKASAFKLRTKNPSFMVTMRPSYIQTGNYLSLPRSFAERYLRE- 317
           R+RT     E +ER +  A  F+    NP F V +RPSY+  G  + LP  FAE+YL   
Sbjct: 103 RKRT--VTAEERERAVNAAKTFE--PTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI 162

Query: 318 SVDVKLEVADGRAWSVWCGVRWAFTRRRTELKGGWKRFAVDNRLQEGDVCVFELINKTPK 377
           S  +KL++ + + W V C     +   R +   GW  F ++N + EGDVCVFEL+ +T  
Sbjct: 163 SGFIKLQLGE-KQWPVRC----LYKAGRAKFSQGWYEFTLENNIGEGDVCVFELL-RTRD 222

Query: 378 VFFKVTIFHL 387
              +VT F +
Sbjct: 223 FVLEVTAFRV 222

The following BLAST results are available for this feature:

BLAST of Lcy07g003610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	8.5e-32	32.70	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9XIB4	1.9e-15	33.97	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]
Q2R9D2	3.2e-15	25.38	B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q84R27	7.2e-15	37.01	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18...	[more]
Q9ZSH7	7.2e-15	33.54	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]

BLAST of Lcy07g003610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5F5	5.1e-157	74.87	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1L7I9	8.8e-157	71.74	B3 domain-containing transcription factor VRN1-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1G597	4.5e-153	70.70	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1DVA1	1.9e-143	71.43	B3 domain-containing transcription factor VRN1-like OS=Momordica charantia OX=36...	[more]
A0A1S3C614	8.8e-133	65.52	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Lcy07g003610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605261.1	6.2e-157	75.84	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
XP_022947008.1	1.1e-156	74.87	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moscha...	[more]
XP_023007388.1	1.8e-156	71.74	B3 domain-containing transcription factor VRN1-like [Cucurbita maxima]	[more]
KAG7035223.1	1.8e-156	75.58	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
XP_023532571.1	1.2e-155	74.61	B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy07g003610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	6.0e-33	32.70	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	1.3e-16	33.97	AP2/B3-like transcriptional factor family protein	[more]
AT3G18960.1	5.1e-16	37.01	AP2/B3-like transcriptional factor family protein	[more]
AT4G01580.1	5.1e-16	33.54	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	1.8e-13	36.92	related to vernalization1 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 27..120 e-value: 9.0E-15 score: 65.1 coord: 288..381 e-value: 1.7E-13 score: 60.9
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 27..118 e-value: 1.4E-14 score: 53.8 coord: 288..379 e-value: 3.6E-18 score: 65.3
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 26..120 score: 12.266134
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 288..387 score: 13.845502
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 286..384 e-value: 4.48572E-24 score: 93.1612
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 25..118 e-value: 5.8055E-18 score: 76.5977
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 19..121 e-value: 4.9E-23 score: 83.0
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 265..386 e-value: 4.7E-32 score: 112.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 283..383
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 20..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..261
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 20..385
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 20..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g003610.1	Lcy07g003610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding