Lcy07g003560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g003560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr07: 15799418 .. 15801113 (+)
RNA-Seq Expression	Lcy07g003560
Synteny	Lcy07g003560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAGGGGTGTCCAGTCCTTGATATAGATCCTGAGATAGAAAGAACTTTTCGTCGTCATCGGAAAGAACAAAGGCGAAAGAGAAGGGAACAACAAGAGTTGAGCGCACAGGAACCTCTTGCAGAAGCTTCTTATATACAAGAATTTCCGATGGACCAACCTGGAGTCGATCCTCAAGTTGACCCACAGAATCGTGGAAGGGAGCAAAATGGTGGGAGAATCCCTCCAGCACCTCCAGTTCCATCGGTGCCACCACATGAAAATCCAATTTATATTGCCGAAGACCGCAATGGAGCAATAAGGGACTATACCTTACCTGTTTTCCAAACTATGAATCCTGGAATTCCAGAGCCACCAATAGAAGCTCCATAATTTGAGCTGAAACCAGTGATGTTTCAAATGCTCAATACCATGGGCCAGTTTCCCGGACATCCAAGTGAAGATCCACATAAACATATCAAACAGTTCTTGAGAATTTGTAGTTCTTTTAAAGTTACAGGAGTGCCTGAAGATACATTGAAACTAAAGCTTTTTCCTTTTTCATTACGGGGAGATGCTGAAGCCTGGCTGGACTCATTCCCTCCAAACTCCATCACATCCTAGAATTACTTGGCTGAAAAATTTTTAGAGAAGTTTTTTCCTTCTAATAAAAATGCTAAGTATAGAGCTGAAATTATTTCTTTTAGACAATCTTATAACGAACCTTTAGATGCAGCTTGGGAGAGATTCCAGAGGCTGGTCAGGAAGTTTCCTCATCATGGATTGCCTGCATGTATCATCATAGAGCATTTTTACAGTGGATTGGATCAAGCTTCAAAAGCTCTAGTCAATGCATCTGCCAATGGATCCTTCTTAAAGAAATCTGCAAATGAAGCACATGCCATATTGGACACAATAGCCACAAATAACAGACACTGGGGAGAGACAGAGCCAACAATCTTAAAGAATCCAGTTAAAACAGTAGAGAAGAAGGCGAATTCAACCATGCAAGCCCAGATCAGTGCCATCCACAAAATGATGATGGGCATGACTATGGCCAACAGAGCTAACATAGCCCCCGCCGATGCTATCTCTTCTCCCTACTGTGATATTTTTAATGAGGAGCATGTTACTGATAACTGTCCACTAAATCCTACATCTGTTTTTTATGTAGGACAATAAGGGAACCAGAACCAGAACCGATGGAATCCATACTCGGCTACATACAACCCAGGTTGGAGACAACATCCAAACTTCTCTTGGGGAGGTCAAGCCAGTACGAGTAATTCCAATACAAATCAATTTGGGAAATCTTCAACAGGATTCAATTCCCAACCTACACAGTAGCAGCCGCAGAAGAACTTTCAACCAGTCCAAGTACATAATCATGAGTCAAATCTAGAGGCTCTTTTAAAAAGTTTGGAAGTACAAATTGGACAGATCGCTCAAGAAATAAAAAACAGATCACAAGGGACATTGCCTAGCAGGACTGAAAACCCTCACCGAGAAGGTAAAGAGCAGTGCAAGGCCGTCACTTGGAGAAGCAGATTAGAATATGATGGACCAGAATACTCCGTGAATCAAGAAGTAAGGAAAATCCCAGAAAAAGCTCCAGAAGAAGTTCCAGAAAAGAAGTTAGAAGTCACCACAGATGTTTTTCAGAATAAAGAAAATAAAGAAAATACCAAGGAATCAGAAACCTTGGAAGAAAAAA

mRNA sequence

ATGAACAAGGGGTGTCCAGTCCTTGATATAGATCCTGAGATAGAAAGAACTTTTCGTCGTCATCGGAAAGAACAAAGGCGAAAGAGAAGGGAACAACAAGAGTTGAGCGCACAGGAACCTCTTGCAGAAGCTTCTTATATACAAGAATTTCCGATGGACCAACCTGGAGTCGATCCTCAAGTTGACCCACAGAATCGTGGAAGGGAGCAAAATGAATACTCCGTGAATCAAGAAGTAAGGAAAATCCCAGAAAAAGCTCCAGAAGAAGTTCCAGAAAAGAAGTTAGAAGTCACCACAGATGTTTTTCAGAATAAAGAAAATAAAGAAAATACCAAGGAATCAGAAACCTTGGAAGAAAAAA

Coding sequence (CDS)

ATGAACAAGGGGTGTCCAGTCCTTGATATAGATCCTGAGATAGAAAGAACTTTTCGTCGTCATCGGAAAGAACAAAGGCGAAAGAGAAGGGAACAACAAGAGTTGAGCGCACAGGAACCTCTTGCAGAAGCTTCTTATATACAAGAATTTCCGATGGACCAACCTGGAGTCGATCCTCAAGTTGACCCACAGAATCGTGGAAGGGAGCAAAATGAATACTCCGTGAATCAAGAAGTAAGGAAAATCCCAGAAAAAGCTCCAGAAGAAGTTCCAGAAAAGAAGTTAGAAGTCACCACAGATGTTTTTCAGAATAAAGAAAATAAAGAAAATACCAAGGAATCAGAAACCTTGGAAGAAAAAA

Protein sequence

MNKGCPVLDIDPEIERTFRRHRKEQRRKRREQQELSAQEPLAEASYIQEFPMDQPGVDPQVDPQNRGREQNEYSVNQEVRKIPEKAPEEVPEKKLEVTTDVFQNKENKENTKESETLEEK

Homology

The following BLAST results are available for this feature:

BLAST of Lcy07g003560 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g003560 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g003560 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g003560 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g003560.1	Lcy07g003560.1	mRNA