Lcy07g003380 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g003380
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr07: 14796776 .. 14803967 (+)
RNA-Seq Expression	Lcy07g003380
Synteny	Lcy07g003380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCGGTTTCCGACGCGTTTCTAGGGATCTTGGTCGGACGGGTCAATCTTCGGCAGAATTATTGTAATCCCATTTGGGCGGATTTTCAACTATTAGCAGATATGTGGTGGCGGTTTTTCTTTTTTCTTCAGAGGTTTTCGAATCTGGAGGATTACTTTAGCGTAATTTCAATCGTAGTACTGGTATTTCAGGGGGTTCGATGGAGCATTGGAATCTCATCGGCTACGGTGGTATCTTGTCTCTTCTTACCCGACTGCTATTTTCCCCTTTTATCTGTTGCATTTTTTTCAATGGATCCTTCTGATTTGGTTGATAACTGGGCTCGTTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCTGATAGAGATGCGGTAGATTGAACTAGACAGCTGTTGGGATTCTGTCTTTTGGGCAAGTTGCTGTGTCATCGATCACTGGGAGCAGAGGTCATGCGAAGGAATTTTAAAGCGGCATAGAGGGTTGATCAAGGATTGCAGGTGGACAGGTTGGGCAACAATCTGTTTATCTTCCGTTTTGTGCACGAGGTGGACAGAATGCGAGTTCTACGACAGGGGCCTTGGATTTTTGAAAAATTCCTTCTGGTCTTGGAGCGCCAATTCGTAGTCTGAAGCCATCTGATCACCAATTTTCTTCTTCGGCTTTTTGGATCCTTGTATTTGATTTGCCTCTGGACTGGTTTAATCAGGCCATGGCGGAGGGAATTGGCAATGTTGTTGGAGTGTTTGAAGATGTTGACAATCAGAACGGATTCCTCTTCTAGGGAGCTAGCCTGCGAATTAGAGTTAGAATTGACCTATCACGACCTATTCGGCGAGGGATTCAGATTTATCCGGATGGATCTCTTAGTGAGTTGTGGGTTCCTTTCAGGTATGAACGTCTTCCTGAGTTATGTTCTCTCTGTGGTATTATAGGCCATGTATCACGTGATTGTGCCATTTCAATTCGGTCGGATAGAGGTTCTGGTTCAATCCCGCTATATGGGGATTGGTTGCGGTTTTCAGGGAAAGGTATGATTCTGAATCATTTCACGGCAAGAGATGTTGATCGTGCGTCAGTTCGGGAGCCGCCACGAAGTCATCACTTGGCTATTGAGGTAGCTCCTATGTCGAGCTCTGCTGTTCCGATAGATGAATTGCCAAGGCAAGCCCAACGTGGAATTCGTATCTCGGAGCCGTCTGAGGAGCAGTTCCGGCGCGGATCAGCGAAGGGATCACCAGTGTTGTATTCTTTGTCCAGAGGGCCGAACGTGTCTGCCAAAGGCAAAGAAAAGGTTGTTGAGGTGGCGAGTAAGTATTGAGGTGACTTTCCTAGGTGGCAGTCGGAAAAGTCTCGTCGGAGCAGTCTTCCAATTCCAGATGTGACGGTGCCGAGGTTTCCTATTCCGGTGACGGTTACAACTAAGGAAACAGCGAAATCAATGCAACCGTTAGACGAAGGGCCTAGTGATTTTGGGAGGGCTTTTAGGGCTAATAACCTGCGGTTATCAGACTCTGTAATGTCATTATTCAATTCGTCTTCATCAATGCTGGGGGATTCAGAAACGGGCCTTGAAAATAATGTAGAGGAGGATGGGCTGGTGGAGAGTGATCCTGAGATGTCTGAGGAAATTGGGCCTATGGGCTTTAGATGGGAAAGAGTGGGCTGAATGCAACCAAGACTCCACCCTGGAGGCCTGCATGAAGGGGTGGTTCATGGACCGTTGGGCTCCGATGGTCCGGAATGGGTTGATCAACCAATTGAGGAAAAAGGGATGGTTTCTATGCATGAAGTTATCCAATCAGATTCTGCAGGGACCATGGCCGAAGTCAATGAGGTGGAGGGGGTGGGTCAGATGGCTTTCTTATTTTCAAGTCTGCTCCGAAGCTCATGAGTCGTGGACCTTCTTGGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGAAACAAATTAATCGATCTCAATAAAGTGTTATTTGAGTAATTCAGTAATTTGGTTATTGAATAATCGAGTTTGCATTAATAAACCCTAAATCTAATAAACTAAGATCCAAGGTTGTTTAAATGAAACTTGGACTAGTATGTGGGGACATACGGGGATCAGTGTCCAAGTAACAACCTAAAAGGTCTATAGTATAGGGACAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTATTTGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGGGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTAGATGTAACGTCGTTAACTAGTTTAGGTTTCTATTTCAATAGGATGACCTAGGTAACTAAATCTCAATCCTGAGTCTGTTATGAACCCCTCTCAGGAGGGATTGTCCTTAGATTTGTATGGGTGAGAATGGCCAGTTCGCCGACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGGTAAGTAGATGTGTGTTCCCTTAAGGGCTGATTCCGGGGCTTGAACAAAGGCGCGCCGTCCTCTCCTGGCCCGAGAGGAACTCCTGTTTAGTGGTTGGACCCTAAACAACTTGTTCATTAAAGGAATCAGTGGTACTTAAGGAACCAGAGGTAACCCAGAGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGCATTGGTCGATATCCGTGGACACATAAATATTCTACAGTGCGAAGAGTGCAGCTGTGGGTCTTTAGTGGAATGACCCACAGTTAACGAATGTTGACTAACTTGGTTAATGAGTTTGGCCAATTAGTCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCAACTGGTAGCTCGTAAAGAGACTTGAGGCAATTAAGTATCCAACTGGTAGCTCGTAAAAAGACTTGAGGCAATTAAGTATAAATTATAAATTGAAAGTGTTCAATTTATTTGGGGAATCGTATAATGTATATTGATGCATGATAATATAAAGTTTATGAAACTTTATAATATAATTTTTGAATTAATTTCAAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGATAATTAATTAATTATGGAATTAATTAATTATTTATTAAAATTAGAGACTTTTTCCTATTAGGAAAGAAAATATTTGAAAGAGTTCAAATAAATTTAATACGAATTGGATTCATATTAATTTTAATTTTAATAAAATTCCTAAGATTAAATATATGATATTTAATTGGATAATTAATTAATTATGGAATTAATTATTTATTTATTAAAATTAGAGACTTTTTCCTATTAGGAAGGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAATATATGATATCTAATTGGGAAATTAATTAATTATTTATTAAAATTAGAGACTTTTTCCTATTAGGAAAAGGTATTCCTTTTCCTATTAGGAAAAAAGTCTTGGCCTTTACTATATATAGGACCCCTGGGGTGGGGTGAAAGGTATCCCATTCATTCTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTGGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTTAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGTGATTATTTCACAAGCAGTTGGTGATTTAATCTGAGTCGTCAACGAGAGTAAGTAATTTGTTACTATATAAATTAGATTTAGATCTATTTTTTGTATGTTTAGCCTTAATATAAATTTAGAATAGTTCTAATATTATTGCCAATGTATTGATATTTTAGATTAAACAAAATTAATTACGAATCGGTCCCAATCACACTTCCGCTTTACGGAATTACGGAATTCCAATCCTTCACTTGGAAAAAGCGGGCGTGTGCTGGATTGGTGCCTAGAGGTATGAATGTGAAAGATCTGGAGGAATTCCAGAAGAAGAAAAATTGACCTTTTTTGTTTTCTCCCGGGAACATTAAACGTCCAAGAATTATTGATGTTGATAGTGAAGAGGTGGGGACTGCTAAGCAGCCCTGCCCAGAGCCATGAAAATTATCTGTTGGAATGTTCATGGAATGGGGAGTCCATGGGCATTCCGTAATGTTAGCAATGAATTAGCTATCTTGAATCCCCATTTATGTTTCCTTTCTGAGACGAAATGTTCGTCTTTTGTTCTAAATAAATTGAAATCGAGTTTGAATTTTTTTCGGGTGTTTTGTGGTTAATCGGGTTGGTCTTAGTGGTGGTTTGTGTTTGTTATGGAAGGATGGTATTGATGTTATTGTTCGTAATTATTCAATTCATCATATAGACGTGGATATTGAGTGGAATAATAAACGCTGGCGATTTACAGGTTTTTATGGTAATCCAGATTCTAATTTAAGGAATCAATCTTGGAATCTTATGCGTCGGTTGTATGATCATAACGATTCTGCTTGGGTTCTAGGGGGTGATTTGAATGAAATTTTGTGGCAAGATGAAAAAGCAAGGGGTCCAGATAGAGAGATTAATCAAATATTGGCTTTTCGTGAGGCGTTGGATGATTGTCATCTTCGAGACCTTGGATTTTCTGGGGGAAAGTTTACTTGGTGTAACAGAAGGGACATGGGAGCTCAGGTGAGTTTGAGACTGGATCGTTTCATTGCAAATGCCAACTTTTGTGACATGTTTGAGACTCTACAAGTTCGTAATCTGGATTGGGCGAAGTCAGATCATCGTCCAATTGAACTAAGCCTAGAGGGTAGAGGTAATCGGATTCGAAGGGATAATAGGCGTCGTACTTGTAAGTTTGAGGAATGGTGGACTCGTAATGAGGAATGCAGTAACATCATTCGCAGAGCTGGGAGTTGGGATTGTAATCCACGTGTTCCCTCTTTACCCATTGTATTGAGGAGCTGTGCATCTGCATTAGGTGGTTGGGGCTCTTGTCAAAATAAGAGACTAAAGGCTAATATCAGAGAGGTGCGGGATAAAATCAAGATGTTGTATGAGTGTGCTCCTCCTGTGGATTTTGATGTTATTCATCGTTTGGAGCGTCAACTAGACTCCTTTCTTCTTGAAGAAGAGATTTAGTGGAAACAACGGTCGAGGGAAAACTGGCTCAAGTGGGGTGATCGTAACACAAAGTGGTTCCACCAAAAAGCAACTTTAAGACGTCAGAGGAATTGGATTCATGGAGTTGAGGATGGCCAAGGAATCTGGCACTCGGAGAAAGCAGGGTTCATGATACTTTCGTAAACTATTTTACAAGCATATTTTCTTCTTGTACTCCGGTGCAGGGGGACTTGGATGAGGTTATTAATTGTGTTCCTCGCAAAGTTACGGAGGAGATGAACCAGATGCTTATGGCTCCCTATTCTAGGGAGGAGGTGTATGCAGCGATCAAAAGCTTTCATCCGACCAAGACCCTGGGGCCAGACGGGTTTCCGGCACTTTTTTATCAAAAATAGTGGGAGATAGTGGGGGATACGACTGTGGGAAATTGTCTCGCCATTCTGAACTCGGAAGCATCGATGCAGGAGTGGAATCACACAAATATTGTGCTCATCCCAAAGATTCGCCTTGCAAGGTTAGTATCGGACTATCGCCCAATTAGCTTATGTAACGTTTCTTACAAAATTGTTACTAAAGTCATAGCTAATAGGCTGAAACGTGTGTTGAATGAGATCATAGATGAGTGCCAGTCAGCTTTTATCCCTGGTAGATCTATATCGGATAATATGATTTTAGCATATGAAACCTTACATTATCTCCAAAATAGGCGTAAAGGGAAAGTTGGTTATGCTGCTTTAAAGCTTGATATGAGTAAAGCTTATAATAGGGTGGAGTGGTCTTATCTGAGCCAAATTATGGCTAAGTTGGGTTTTCATGATGATTGGATCAAACTGGTTATGAAATGTATATCGACGGCTACATTCTCCATACTAATGAACGAGGAATCCTTTGGGTTCATCCAACCATCCAGGGGTATAAGACAGGGGGATCCTCTATCTCCTTATCTGTATTTACTTTGTACGGAAGGTCTCTCTGCTTTGTTGGTTTCAGCTAGGTCACATAATTTGGCAGGGATATCAATTGCATGAGCTTGCCCCAAGGTATCACATCTATTCTTTGCCGATGATAGTCTAGTCTTTCTTAAAGCAGCGACTGCAGATTTTGGCCACTTCAAGGCTATTTTAAATATTTATGAGAAGGCGTCCGGTCAATGTGTCAATGTTCACAAATCAACGGTGTACTTCTCGAAGAATGTTCCGCTTGATTCAAGGCAACATCTTGGCAATGTAGTATCTATGAATGTATCTGAATCTGTGGGCGGGGGGGGGGGGGGTATTTAGGACTTCCTTCTACTTTTCACTGTGGAAAAACACGGGATTTTCAATTCTTACTTGATAAGGTGTGGAATCTTCTACAAGGATGGAAGAGTCAACTTTTCTCATAAGGTGGTAAGGACGTGTTGATAAAAAGTATCATCTAAGCCATTCCGACCTATATGATGGGTTGTTTTCGGATCCCCAAAGGAATCTTATTCAAAATTTCGGCCCTATGTGCCAAATTTTGGTGGGGTTCCCAAGGGGACAAGCGCAAGATGCATTGGAGACGATGGGCGAAACTCTGCATACCAAAGGAGCTTGGTGGTTTGAATTTTCGTGATCTTATTAAGTTTAACCAGGCAATGCTTGCAAAACAGGTGTGGCGGGTTCTAACTAATCCACATCTCACAATTTCCAAAGTTTTGCGTGGGAGATATTTCCCGAATTCGTCTGTTTTAGAAGCAACCCATAAATCGTCTTCCTCTTACTTTTGGAAGGGATTTGTGTGGGGGAGGGATATGTTGAAGGCAGGAATAAGGAAAAATCTAGGAAATGGACAATCGATTAAGTTGTTTTGCGACCCATGGATTCCTAGGCTTACAACTTTTCGAGTGGTTTCACCTCCCCCTGTCGCTATGGAGAATTCAATTGTGGCGGATTTCTTCACTCCTTCACATCAATGA

mRNA sequence

ATGGGGGCGGTTTCCGACGCGTTTCTAGGGATCTTGGTCGGACGGGTCAATCTTCGGCAGAATTATTGTAATCCCATTTGGGCGGATTTTCAACTATTAGCAGATATGTGGTGGCGGTTTTTCTTTTTTCTTCAGAGGTTTTCGAATCTGGAGGATTACTTTAGCGTAATTTCAATCGTAGTACTGGTATTTCAGGGGGTTCGATGGAGCATTGGAATCTCATCGGCTACGGTGGTATCTTGTCTCTTCTTACCCGACTGCTATTTTCCCCTTTTATCTGTTGCATTTTTTTCAATGGATCCTTCTGATTTGGTTGATAACTGGGCTCGTTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCTGATAGAGATGCGGGAGCTAGCCTGCGAATTAGAGTTAGAATTGACCTATCACGACCTATTCGGCGAGGGATTCAGATTTATCCGGATGGATCTCTTAGTGAGTTGTGGGTTCCTTTCAGGTATGAACGTCTTCCTGAGTTATGTTCTCTCTGTGGTATTATAGGCCATGTATCACGTGATTGTGCCATTTCAATTCGGTCGGATAGAGGTTCTGGTTCAATCCCGCTATATGGGGATTGGTTGCGGTTTTCAGGGAAAGGTATGATTCTGAATCATTTCACGGCAAGAGATGTTGATCGTGCGTCAGTTCGGGAGCCGCCACGAAGTCATCACTTGGCTATTGAGGTAGCTCCTATGTCGAGCTCTGCTGTTCCGATAGATGAATTGCCAAGGCAAGCCCAACGTGGAATTCGTATCTCGGAGCCGTCTGAGGAGCAGTTCCGGCGCGGATCAGCGAAGGGATCACCAGTGTTGTATTCTTTGTCCAGAGGGCCGAACGTGTCTGCCAAAGGCAAAGAAAAGGTTGTTGAGGTGGCGAATGTGACGGTGCCGAGGTTTCCTATTCCGGTGACGGTTACAACTAAGGAAACAGCGAAATCAATGCAACCGTTAGACGAAGGGCCTAGTGATTTTGGGAGGGCTTTTAGGGCTAATAACCTGCGGTTATCAGACTCTGTAATGTCATTATTCAATTCGTCTTCATCAATGCTGGGGGATTCAGAAACGGGCCTTGAAAATAATGTAGAGGAGGATGGGCTGGTGGAGAGTGATCCTGAGATGTCTGAGGAAATTGGGCCTATGGGCTTTAGATGGGAAAGAGATGGTATTGATGTTATTGTTCGTAATTATTCAATTCATCATATAGACGTGGATATTGAGTGGAATAATAAACGCTGGCGATTTACAGGTTTTTATGGTAATCCAGATTCTAATTTAAGGAATCAATCTTGGAATCTTATGCGTCGGTTGTATGATCATAACGATTCTGCTTGGGTTCTAGGGGGTGATTTGAATGAAATTTTGTGGCAAGATGAAAAAGCAAGGGGTCCAGATAGAGAGATTAATCAAATATTGGCTTTTCGTGAGGCGTTGGATGATTGTCATCTTCGAGACCTTGGATTTTCTGGGGGAAAGTTTACTTGGTGTAACAGAAGGGACATGGGAGCTCAGGTGAGTTTGAGACTGGATCGTTTCATTGCAAATGCCAACTTTTGTGACATGTTTGAGACTCTACAAGTTCGTAATCTGGATTGGGCGAAGTCAGATCATCGTCCAATTGAACTAAGCCTAGAGGGTAGAGGTAATCGGATTCGAAGGGATAATAGGCGTCGTACTTGTAAGTTTGAGGAATGGTGGACTCGTAATGAGGAATGCAGTAACATCATTCGCAGAGCTGGGAGTTGGGATTGTAATCCACGTGTTCCCTCTTTACCCATTGTATTGAGGAGCTGTGCATCTGCATTAGGTGGTTGGGGCTCTTGTCAAAATAAGAGACTAAAGGCTAATATCAGAGAGGGGGACTTGGATGAGGTTATTAATTGTGTTCCTCGCAAAGTTACGGAGGAGATGAACCAGATGCTTATGGCTCCCTATTCTAGGGAGGAGGGATTTGTGTGGGGGAGGGATATGTTGAAGGCAGGAATAAGGAAAAATCTAGGAAATGGACAATCGATTAAGTTGTTTTGCGACCCATGGATTCCTAGGCTTACAACTTTTCGAGTGGTTTCACCTCCCCCTGTCGCTATGGAGAATTCAATTGTGGCGGATTTCTTCACTCCTTCACATCAATGA

Coding sequence (CDS)

ATGGGGGCGGTTTCCGACGCGTTTCTAGGGATCTTGGTCGGACGGGTCAATCTTCGGCAGAATTATTGTAATCCCATTTGGGCGGATTTTCAACTATTAGCAGATATGTGGTGGCGGTTTTTCTTTTTTCTTCAGAGGTTTTCGAATCTGGAGGATTACTTTAGCGTAATTTCAATCGTAGTACTGGTATTTCAGGGGGTTCGATGGAGCATTGGAATCTCATCGGCTACGGTGGTATCTTGTCTCTTCTTACCCGACTGCTATTTTCCCCTTTTATCTGTTGCATTTTTTTCAATGGATCCTTCTGATTTGGTTGATAACTGGGCTCGTTTGAGCTTAACGGAGGAGGAAGAAATTACTTCGGTGACTGCTGATAGAGATGCGGGAGCTAGCCTGCGAATTAGAGTTAGAATTGACCTATCACGACCTATTCGGCGAGGGATTCAGATTTATCCGGATGGATCTCTTAGTGAGTTGTGGGTTCCTTTCAGGTATGAACGTCTTCCTGAGTTATGTTCTCTCTGTGGTATTATAGGCCATGTATCACGTGATTGTGCCATTTCAATTCGGTCGGATAGAGGTTCTGGTTCAATCCCGCTATATGGGGATTGGTTGCGGTTTTCAGGGAAAGGTATGATTCTGAATCATTTCACGGCAAGAGATGTTGATCGTGCGTCAGTTCGGGAGCCGCCACGAAGTCATCACTTGGCTATTGAGGTAGCTCCTATGTCGAGCTCTGCTGTTCCGATAGATGAATTGCCAAGGCAAGCCCAACGTGGAATTCGTATCTCGGAGCCGTCTGAGGAGCAGTTCCGGCGCGGATCAGCGAAGGGATCACCAGTGTTGTATTCTTTGTCCAGAGGGCCGAACGTGTCTGCCAAAGGCAAAGAAAAGGTTGTTGAGGTGGCGAATGTGACGGTGCCGAGGTTTCCTATTCCGGTGACGGTTACAACTAAGGAAACAGCGAAATCAATGCAACCGTTAGACGAAGGGCCTAGTGATTTTGGGAGGGCTTTTAGGGCTAATAACCTGCGGTTATCAGACTCTGTAATGTCATTATTCAATTCGTCTTCATCAATGCTGGGGGATTCAGAAACGGGCCTTGAAAATAATGTAGAGGAGGATGGGCTGGTGGAGAGTGATCCTGAGATGTCTGAGGAAATTGGGCCTATGGGCTTTAGATGGGAAAGAGATGGTATTGATGTTATTGTTCGTAATTATTCAATTCATCATATAGACGTGGATATTGAGTGGAATAATAAACGCTGGCGATTTACAGGTTTTTATGGTAATCCAGATTCTAATTTAAGGAATCAATCTTGGAATCTTATGCGTCGGTTGTATGATCATAACGATTCTGCTTGGGTTCTAGGGGGTGATTTGAATGAAATTTTGTGGCAAGATGAAAAAGCAAGGGGTCCAGATAGAGAGATTAATCAAATATTGGCTTTTCGTGAGGCGTTGGATGATTGTCATCTTCGAGACCTTGGATTTTCTGGGGGAAAGTTTACTTGGTGTAACAGAAGGGACATGGGAGCTCAGGTGAGTTTGAGACTGGATCGTTTCATTGCAAATGCCAACTTTTGTGACATGTTTGAGACTCTACAAGTTCGTAATCTGGATTGGGCGAAGTCAGATCATCGTCCAATTGAACTAAGCCTAGAGGGTAGAGGTAATCGGATTCGAAGGGATAATAGGCGTCGTACTTGTAAGTTTGAGGAATGGTGGACTCGTAATGAGGAATGCAGTAACATCATTCGCAGAGCTGGGAGTTGGGATTGTAATCCACGTGTTCCCTCTTTACCCATTGTATTGAGGAGCTGTGCATCTGCATTAGGTGGTTGGGGCTCTTGTCAAAATAAGAGACTAAAGGCTAATATCAGAGAGGGGGACTTGGATGAGGTTATTAATTGTGTTCCTCGCAAAGTTACGGAGGAGATGAACCAGATGCTTATGGCTCCCTATTCTAGGGAGGAGGGATTTGTGTGGGGGAGGGATATGTTGAAGGCAGGAATAAGGAAAAATCTAGGAAATGGACAATCGATTAAGTTGTTTTGCGACCCATGGATTCCTAGGCTTACAACTTTTCGAGTGGTTTCACCTCCCCCTGTCGCTATGGAGAATTCAATTGTGGCGGATTTCTTCACTCCTTCACATCAATGA

Protein sequence

MGAVSDAFLGILVGRVNLRQNYCNPIWADFQLLADMWWRFFFFLQRFSNLEDYFSVISIVVLVFQGVRWSIGISSATVVSCLFLPDCYFPLLSVAFFSMDPSDLVDNWARLSLTEEEEITSVTADRDAGASLRIRVRIDLSRPIRRGIQIYPDGSLSELWVPFRYERLPELCSLCGIIGHVSRDCAISIRSDRGSGSIPLYGDWLRFSGKGMILNHFTARDVDRASVREPPRSHHLAIEVAPMSSSAVPIDELPRQAQRGIRISEPSEEQFRRGSAKGSPVLYSLSRGPNVSAKGKEKVVEVANVTVPRFPIPVTVTTKETAKSMQPLDEGPSDFGRAFRANNLRLSDSVMSLFNSSSSMLGDSETGLENNVEEDGLVESDPEMSEEIGPMGFRWERDGIDVIVRNYSIHHIDVDIEWNNKRWRFTGFYGNPDSNLRNQSWNLMRRLYDHNDSAWVLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCNRRDMGAQVSLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRRRTCKFEEWWTRNEECSNIIRRAGSWDCNPRVPSLPIVLRSCASALGGWGSCQNKRLKANIREGDLDEVINCVPRKVTEEMNQMLMAPYSREEGFVWGRDMLKAGIRKNLGNGQSIKLFCDPWIPRLTTFRVVSPPPVAMENSIVADFFTPSHQ

Homology

[Close]

BLAST of Lcy07g003380 vs. ExPASy TrEMBL
Match: A0A6P9EM92 (uncharacterized protein LOC108979776 OS=Juglans regia OX=51240 GN=LOC108979776 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-54
Identity = 176/541 (32.53%), Postives = 261/541 (48.24%), Query Frame = 0


Query: 112 SLTEEEEITSVTADRDAGASLRIRVRIDLSRPIRRGIQIYPDGSLSELWVPFRYERLPEL 171
           SL   E+I  +  +   G  +RIRV ID+++ + RG ++   GS +  WV F YE+LP+ 
Sbjct: 151 SLGHMEDIDLIDGEIAWGEFMRIRVCIDITKSLLRGKKLC-IGSRTPYWVRFSYEQLPDF 210

Query: 172 CSLCGIIGHVSRDCAISIRSDRGSGSIPLYGDWLRFSGKGMILNHFTARDVDRASVREPP 231
           C +C  IGH  RDC  +   D      P YG WLR  G+G+         +   + R PP
Sbjct: 211 CFICRRIGHAFRDCDQAQDFDEKDTPFP-YGQWLRGGGRGV--------KMMVPNGRRPP 270

Query: 232 RSHHLAIEVAPMSSSAVPIDELPRQAQRGIRISE-PSEEQFRRGSAKGSPVLYSLSR-GP 291
            S    +  A  ++  V  D     A+R   ++  PSE  +   +    P++ S+     
Sbjct: 271 SSEVNPVSTAQRTNGVVLEDV---AAKRTPPVTPGPSEPWYADLAETVEPMVESVEGFSS 330

Query: 292 NVSAKGKEKVVEVANVTVPRFPIPVTVTTKETAKSMQPLDEGPSDFGRAFRANNLRLSDS 351
            V + G +KV+E      P+ P+ +TV   ++  S+QP+  GPSD G       L    +
Sbjct: 331 TVISNGLKKVMERG----PQTPL-MTVFPSQSEASLQPV--GPSDMG-------LTNPPT 390

Query: 352 VMSLFNSSSSMLGDSETGLENNVEEDGLVESDPEM-----------SEEIGPMGFRWERD 411
           V      +   LG     L   +  +     DP M             E G +   W  D
Sbjct: 391 VGMYETKAQEALGPGIRALRELITRE-----DPTMVFLQETKLKTRKMESGGLALLWRGD 450

Query: 412 GIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRLYDHNDS--AW 471
            + V ++++SI+H+DV +  +  R WRFTG YGNP +  R  +W+L+R+L+D +D    W
Sbjct: 451 -LQVRLKSFSINHVDVLVNEDAAREWRFTGIYGNPQTLSRFLTWDLIRQLHDDDDDDVPW 510

Query: 472 VLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCNRRDMGAQV 531
           +LGGD NE+L   EK RG  R  NQ+ AFRE L DC LRD+GF G KFTW N R+    +
Sbjct: 511 LLGGDFNEVLQLSEKKRGRTRSENQMAAFREVLMDCSLRDMGFHGPKFTWSNGREGTEAI 570

Query: 532 SLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRRRTCKFEEW 591
           S RLDRF+ N +F  +F    VR+   A SDH PI    EG    I +  R R  +FE  
Sbjct: 571 SERLDRFLGNNSFFGLFPQGVVRHGVAAHSDHLPIWFDTEG---GIVKGKRSRNFRFEAM 630

Query: 592 WTRNEECSNIIR---RAGSWDCNPRVPSLPIVLRSCASALGGW-----GSCQNKRLKANI 629
           W   ++C++II      G+   N  +  +   ++ C   L  W     G  + K+ +A  
Sbjct: 631 WVGEQKCADIIEDVWMTGNSIGNNNMEGVMQRIKLCCHRLASWNKLSFGHVKQKKAEARQ 655

[Close]

BLAST of Lcy07g003380 vs. ExPASy TrEMBL
Match: A0A7J6GL46 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_014122 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.7e-47
Identity = 183/644 (28.42%), Postives = 276/644 (42.86%), Query Frame = 0


Query: 117 EEITSVTADRDAGASLRIRVRIDLSRPIRRGIQIYPDGSLSELWVPFRYERLPELCSLCG 176
           E I  +   +    ++++RVR+++  P++RG+++  D   +E+ + F+Y+ LP+ C  CG
Sbjct: 174 ERIGKLEDIKIVNGTMKVRVRMNIIEPLKRGLRVAIDDQGNEVSLIFQYDHLPDFCYDCG 233

Query: 177 IIGHVSRDCAI-SIRSDRGSGSIPLYGDWL-----------RFSGK-------GMILNHF 236
           IIGH + DC +     D        +G WL           RF+ +         I+   
Sbjct: 234 IIGHKALDCPLKDFAGDNPQFDSGRFGSWLCAPSSPPRDSFRFNKRRPESPTNRPIMTMG 293

Query: 237 TARDVDRASVREPPRSHHLAIE-VAPMS-----------------------SSAVPIDEL 296
            A  +  A  R  PR   L  E +AP S                          VP +  
Sbjct: 294 EASKIISAVERSRPRFSGLTPEQLAPTSVLEGRERDEDGLTGNGIDRGSGGEPEVPSESR 353

Query: 297 PRQAQRGIRISEPSEEQFRRGSAKGSPVLYSLSRGPNVSA-----KGKE----------- 356
            R A  G    + S E F+    +       +  G +V+      K KE           
Sbjct: 354 VRSAGDG--HDDRSSEGFQGNIERKGKATTVICEGEDVNGLAELLKSKEVHPCEAWDASS 413

Query: 357 KVVEVANVTVPRFPIPVTVTTKETAKS---MQPLDEGPSDFGRAFRAN-NLRLSDSVMSL 416
             V V N        P    +KE  K    + P  +    F  AF+      L       
Sbjct: 414 VGVTVENCEEINGGGPSKDRSKEINKGKGILLPSSQEELSFSHAFQHTFEPILKAQKSKT 473

Query: 417 FNSSSSMLGDSETG------------LENNVEEDGLVESDPEM-------------SEEI 476
           +  ++S  G S  G            L + +  + L +  P               +E  
Sbjct: 474 WKRANSSTGRSSKGKPKSSSFPISPKLSHVIVANALNKLSPRSGCDSKRKMDVEYNNESS 533

Query: 477 GPMGFRWERDGIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRL 536
           G +   W  D  +V V++++  HID  ++   +  WRFTGFYGNP ++ R++SW L+ RL
Sbjct: 534 GGLLLLW-NDDWEVSVKSFTSGHIDALVKCPGRELWRFTGFYGNPKASCRSESWRLLCRL 593

Query: 537 YDHNDSAWVLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCN 596
            D  D  W+ GGD NEIL  +EK  G DR ++ +  F+ ALD C L DLGF G  FTW N
Sbjct: 594 KDLFDLPWICGGDFNEILSINEKKGGSDRSMSAMTEFQNALDRCSLADLGFEGQCFTWLN 653

Query: 597 RRDMGAQVSLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRR 656
           +R  GA V  RLDR+  N  + D+F  ++V N D+  SDHRPI  +LE    R R D ++
Sbjct: 654 KRQGGAHVQERLDRYFCNQRWHDLFPFVKVLNGDFLNSDHRPIVATLENVSRRQRYD-KK 713

Query: 657 RTCKFEEWWTRNEECSNIIRRAG-SWDCN-PRVPSLPIVLRSCASALGGWGSCQNKRLKA 660
           R  +FE  W ++ EC  II R+  S DC      SL  +   CA  LG W   +   L  
Sbjct: 714 RCFRFETHWLKDPECQEIINRSWLSLDCPLANQDSLIDIFGLCADQLGMWNKSKYGSLPR 773

[Close]

BLAST of Lcy07g003380 vs. ExPASy TrEMBL
Match: A0A7J6GGL8 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_006630 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-46
Identity = 176/614 (28.66%), Postives = 264/614 (43.00%), Query Frame = 0


Query: 117 EEITSVTADRDAGASLRIRVRIDLSRPIRRGIQIYPDGSLSELWVPFRYERLPELCSLCG 176
           E I  +   +    ++++RVR+++  P++RG+++  D   +E+ + F+Y+ LP+ C  CG
Sbjct: 150 ERIGKLEDIKIVNGTMKVRVRMNIIEPLKRGLRVAIDDQGNEVSLIFQYDHLPDFCYDCG 209

Query: 177 IIGHVSRDCAI-SIRSDRGSGSIPLYGDWL-----------RFSGK-------GMILNHF 236
           IIGH + DC +     D        +G WL           RF+ +         I+   
Sbjct: 210 IIGHKALDCPLKDFAGDNPQFDSGRFGSWLCAPSSPPRDSFRFNKRRPESPTNRPIMTMG 269

Query: 237 TARDVDRASVREPPRSHHLAIE-VAPMS-----------------------SSAVPIDEL 296
            A  +  A  R  PR   L  E +AP S                          VP +  
Sbjct: 270 EASKIISAVERSRPRFSGLTPEQLAPTSVLEGRERDEDGLTGNGIDRGSGGEPEVPSESR 329

Query: 297 PRQAQRGIRISEPSEEQFRRGSAKGSPVLYSLSRGPNVSA-----KGKE----------- 356
            R A  G    + S E F+    +       +  G +V+      K KE           
Sbjct: 330 VRSAGDG--HDDRSSEGFQGNIERKGKATTVICEGEDVNGLAELLKSKEVHPCEAWDASS 389

Query: 357 KVVEVANVTVPRFPIPVTVTTKETAKS---MQPLDEGPSDFGRAFRAN-NLRLSDSVMSL 416
             V V N        P    +KE  K    + P  +    F  AF+      L       
Sbjct: 390 VGVTVENCEEINGGGPSKDRSKEINKGKGILLPSSQEELSFSHAFQHTFEPILKAQKSKT 449

Query: 417 FNSSSSMLGDSETG------------LENNVEEDGLVESDPEM-------------SEEI 476
           +  ++S  G S  G            L + +  + L +  P               +E  
Sbjct: 450 WKRANSSTGRSSKGKPKSSSFPISPKLSHVIVANALNKLSPRSGCDSKRKMDVEYNNESS 509

Query: 477 GPMGFRWERDGIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRL 536
           G +   W  D  +V V++++  HID  ++   +  WRFTGFYGNP ++ R++SW L+ RL
Sbjct: 510 GGLLLLW-NDDWEVSVKSFTSGHIDALVKCPGRELWRFTGFYGNPKASCRSESWRLLCRL 569

Query: 537 YDHNDSAWVLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCN 596
            D  D  W+ GGD NEIL  +EK  G DR ++ +  F+ ALD C L DLGF G  FTW N
Sbjct: 570 KDLFDLPWICGGDFNEILSINEKKGGSDRSMSAMTEFQNALDRCSLADLGFEGQCFTWLN 629

Query: 597 RRDMGAQVSLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRR 638
           +R  GA V  RLDR+  N  + D+F  ++V N D+  SDHRPI  +LE    R R D ++
Sbjct: 630 KRQGGAHVQERLDRYFCNQRWHDLFPFVKVLNGDFLNSDHRPIVATLENVSRRQRYD-KK 689

[Close]

BLAST of Lcy07g003380 vs. ExPASy TrEMBL
Match: A0A2N9G189 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20803 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.1e-46
Identity = 165/581 (28.40%), Postives = 262/581 (45.09%), Query Frame = 0


Query: 129 GASLRIRVRIDLSRPIRRG-IQIYPDGSLSELWVPFRYERLPELCSLCGIIGHVSRDCAI 188
           G  LRIRV ID+++P+ RG I ++ +G  +  WV FRYE LP  C  CG++GH   +C  
Sbjct: 111 GHYLRIRVNIDITKPLLRGKILVFDEG--APFWVDFRYEHLPIFCYRCGVLGHGMNECLY 170

Query: 189 SIRSDRG-SGSIPLYGDWLRF------------------SGKGMILNHFTARDVD-RASV 248
             RS    + +  +YG WLR                     +G  ++    R+ +   +V
Sbjct: 171 GRRSGESFTVNSDMYGQWLRAVPVRQRRFRESFPSDGEGDSRGGSVHRSGRREAEVHFAV 230

Query: 249 REPPRSHHLAIEVAPMSSSAVPIDELPRQAQRGIRISEPSEEQFRRGSAKGSPV--LYSL 308
             P R     +E      + V ++++   ++ G+    P       G  +G P   L+ +
Sbjct: 231 DHPSRKARECVE------AGVGVEKI---SEVGVLAKNP------MGIHQGVPTFGLHKI 290

Query: 309 SR-GP-----NVSAKGKEKVVEVANVTVPRFPIPVTVTTKETA--------------KSM 368
              GP     +V   G  K  +  ++ +     PVT++  + +               + 
Sbjct: 291 QNVGPSHLSQHVGEVGSSKYSDKIDLKLGEDISPVTLSGGDLSGIQVEDMVFNVSHDHAN 350

Query: 369 QPLDEGPSDFGRAFRANNLRLSDSVMS-----LFNSSSSMLGDSETGLENNVEEDGLVES 428
           +    G    G + R    ++  + MS     +    SS LG           EDG  E 
Sbjct: 351 ESYVHGHRRAGVSHRFKWKKMVRAQMSTPRATVLVGQSSKLGKRSFAEVVEDNEDGSAEP 410

Query: 429 DPEMSEEIGPMGFRWERDGIDVIVRNYSIHHIDVDIEWNN-KRWRFTGFYGNPDSNLRNQ 488
             +     G +   W+   + + VR++S HH D ++  +N   WR TGFYG+P++ LR +
Sbjct: 411 SSKKGYG-GGLALLWD-SSLSIHVRSFSSHHFDAEVFLSNGLGWRLTGFYGHPEAALRAR 470

Query: 489 SWNLMRRLYDHNDSAWVLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFS 548
           SW L+RRL++  D  WV+ GD NEI   DE+    D  + Q+ AFR+ L DC L+DLGF 
Sbjct: 471 SWALLRRLHEGQDMPWVVLGDFNEITSLDEQWGRLDHNLVQMAAFRDVLIDCSLQDLGFF 530

Query: 549 GGKFTWCNRRDMGAQVSLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGN 608
           G  FTW NRR   A V +RLDR +ANA    +F  ++V ++  + SDH  +   +E   N
Sbjct: 531 GPPFTWSNRRRDNALVRVRLDRGVANAGRLQLFPLMRVNHVVISSSDHLGLLFDMESIAN 590

Query: 609 RI-RRDNRRRTCKFEEWWTRNEECSNIIRRAGSWDCNPRVPSLPIVLRSCASALGGWGSC 660
               +  RRR  +F   W R   C   I +A  W     +P     +   A         
Sbjct: 591 GFGGQGRRRRPFRFNHSWVREVGCEEKIVKA--W----TLPQYGTAMYRVAK-------- 650

[Close]

BLAST of Lcy07g003380 vs. ExPASy TrEMBL
Match: A0A7J6DUI7 (Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_029501 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.5e-45
Identity = 111/320 (34.69%), Postives = 171/320 (53.44%), Query Frame = 0


Query: 398 DGIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRLYDHNDSAWV 457
           D  +V V+++S+ HID  ++   +R WRFTGFYGNP ++ R+ SW L+ RL D     W+
Sbjct: 4   DDWEVSVKSFSVGHIDALVQCPGRRLWRFTGFYGNPKASSRSDSWRLLCRLKDLFALPWI 63

Query: 458 LGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCNRRDMGAQVS 517
            GGD NEIL   EK  G DR ++ +  F++ALD C L D+G+ G  FTW N+R   A V 
Sbjct: 64  CGGDFNEILSISEKKGGADRSLSAMAEFQQALDKCSLVDMGYDGQCFTWLNKRQGAAHVQ 123

Query: 518 LRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRRRTCKFEEWW 577
            RLDRF  N ++ ++F +  V   D+  SDHRP+  +LE    R+++ +++R  +FE  W
Sbjct: 124 ERLDRFCCNQDWHELFPSGNVCTGDFIHSDHRPVVATLE-NVVRVQKKDKKRGFRFETHW 183

Query: 578 TRNEECSNIIRRAGSWDCNP--RVPSLPIVLRSCASALGGWGSCQNKRLKANIREGDLDE 637
            ++EEC +I+ ++ +    P     S+  +   CA  LG W   +NK             
Sbjct: 184 LKDEECHDIVHQSWAAQDGPLESQESIIDIFGRCADRLGTWN--KNK------------- 243

Query: 638 VINCVPRKVTEEMNQMLMAPYSREEGFVWGRDMLKAGIRKNLGNGQSIKLFCDPWIPRLT 697
               +P+                         +L +G+RK +G+G+S+  F DPW+PR  
Sbjct: 244 -FGSIPKL------------------------LLNSGMRKVVGDGRSVNAFRDPWVPRPR 280

Query: 698 TFRVVSPPPVAMENSIVADF 715
           +FR +SP P   E  +V+DF
Sbjct: 304 SFRPISPAPT--EGLMVSDF 280

[Close]

BLAST of Lcy07g003380 vs. NCBI nr
Match: XP_035545013.1 (uncharacterized protein LOC108979776 [Juglans regia])

HSP 1 Score: 224.2 bits (570), Expect = 3.7e-54
Identity = 176/541 (32.53%), Postives = 261/541 (48.24%), Query Frame = 0


Query: 112 SLTEEEEITSVTADRDAGASLRIRVRIDLSRPIRRGIQIYPDGSLSELWVPFRYERLPEL 171
           SL   E+I  +  +   G  +RIRV ID+++ + RG ++   GS +  WV F YE+LP+ 
Sbjct: 151 SLGHMEDIDLIDGEIAWGEFMRIRVCIDITKSLLRGKKLC-IGSRTPYWVRFSYEQLPDF 210

Query: 172 CSLCGIIGHVSRDCAISIRSDRGSGSIPLYGDWLRFSGKGMILNHFTARDVDRASVREPP 231
           C +C  IGH  RDC  +   D      P YG WLR  G+G+         +   + R PP
Sbjct: 211 CFICRRIGHAFRDCDQAQDFDEKDTPFP-YGQWLRGGGRGV--------KMMVPNGRRPP 270

Query: 232 RSHHLAIEVAPMSSSAVPIDELPRQAQRGIRISE-PSEEQFRRGSAKGSPVLYSLSR-GP 291
            S    +  A  ++  V  D     A+R   ++  PSE  +   +    P++ S+     
Sbjct: 271 SSEVNPVSTAQRTNGVVLEDV---AAKRTPPVTPGPSEPWYADLAETVEPMVESVEGFSS 330

Query: 292 NVSAKGKEKVVEVANVTVPRFPIPVTVTTKETAKSMQPLDEGPSDFGRAFRANNLRLSDS 351
            V + G +KV+E      P+ P+ +TV   ++  S+QP+  GPSD G       L    +
Sbjct: 331 TVISNGLKKVMERG----PQTPL-MTVFPSQSEASLQPV--GPSDMG-------LTNPPT 390

Query: 352 VMSLFNSSSSMLGDSETGLENNVEEDGLVESDPEM-----------SEEIGPMGFRWERD 411
           V      +   LG     L   +  +     DP M             E G +   W  D
Sbjct: 391 VGMYETKAQEALGPGIRALRELITRE-----DPTMVFLQETKLKTRKMESGGLALLWRGD 450

Query: 412 GIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRLYDHNDS--AW 471
            + V ++++SI+H+DV +  +  R WRFTG YGNP +  R  +W+L+R+L+D +D    W
Sbjct: 451 -LQVRLKSFSINHVDVLVNEDAAREWRFTGIYGNPQTLSRFLTWDLIRQLHDDDDDDVPW 510

Query: 472 VLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCNRRDMGAQV 531
           +LGGD NE+L   EK RG  R  NQ+ AFRE L DC LRD+GF G KFTW N R+    +
Sbjct: 511 LLGGDFNEVLQLSEKKRGRTRSENQMAAFREVLMDCSLRDMGFHGPKFTWSNGREGTEAI 570

Query: 532 SLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRRRTCKFEEW 591
           S RLDRF+ N +F  +F    VR+   A SDH PI    EG    I +  R R  +FE  
Sbjct: 571 SERLDRFLGNNSFFGLFPQGVVRHGVAAHSDHLPIWFDTEG---GIVKGKRSRNFRFEAM 630

Query: 592 WTRNEECSNIIR---RAGSWDCNPRVPSLPIVLRSCASALGGW-----GSCQNKRLKANI 629
           W   ++C++II      G+   N  +  +   ++ C   L  W     G  + K+ +A  
Sbjct: 631 WVGEQKCADIIEDVWMTGNSIGNNNMEGVMQRIKLCCHRLASWNKLSFGHVKQKKAEARQ 655

[Close]

BLAST of Lcy07g003380 vs. NCBI nr
Match: KAF4383622.1 (hypothetical protein F8388_014122 [Cannabis sativa])

HSP 1 Score: 199.5 bits (506), Expect = 9.7e-47
Identity = 183/644 (28.42%), Postives = 276/644 (42.86%), Query Frame = 0


Query: 117 EEITSVTADRDAGASLRIRVRIDLSRPIRRGIQIYPDGSLSELWVPFRYERLPELCSLCG 176
           E I  +   +    ++++RVR+++  P++RG+++  D   +E+ + F+Y+ LP+ C  CG
Sbjct: 174 ERIGKLEDIKIVNGTMKVRVRMNIIEPLKRGLRVAIDDQGNEVSLIFQYDHLPDFCYDCG 233

Query: 177 IIGHVSRDCAI-SIRSDRGSGSIPLYGDWL-----------RFSGK-------GMILNHF 236
           IIGH + DC +     D        +G WL           RF+ +         I+   
Sbjct: 234 IIGHKALDCPLKDFAGDNPQFDSGRFGSWLCAPSSPPRDSFRFNKRRPESPTNRPIMTMG 293

Query: 237 TARDVDRASVREPPRSHHLAIE-VAPMS-----------------------SSAVPIDEL 296
            A  +  A  R  PR   L  E +AP S                          VP +  
Sbjct: 294 EASKIISAVERSRPRFSGLTPEQLAPTSVLEGRERDEDGLTGNGIDRGSGGEPEVPSESR 353

Query: 297 PRQAQRGIRISEPSEEQFRRGSAKGSPVLYSLSRGPNVSA-----KGKE----------- 356
            R A  G    + S E F+    +       +  G +V+      K KE           
Sbjct: 354 VRSAGDG--HDDRSSEGFQGNIERKGKATTVICEGEDVNGLAELLKSKEVHPCEAWDASS 413

Query: 357 KVVEVANVTVPRFPIPVTVTTKETAKS---MQPLDEGPSDFGRAFRAN-NLRLSDSVMSL 416
             V V N        P    +KE  K    + P  +    F  AF+      L       
Sbjct: 414 VGVTVENCEEINGGGPSKDRSKEINKGKGILLPSSQEELSFSHAFQHTFEPILKAQKSKT 473

Query: 417 FNSSSSMLGDSETG------------LENNVEEDGLVESDPEM-------------SEEI 476
           +  ++S  G S  G            L + +  + L +  P               +E  
Sbjct: 474 WKRANSSTGRSSKGKPKSSSFPISPKLSHVIVANALNKLSPRSGCDSKRKMDVEYNNESS 533

Query: 477 GPMGFRWERDGIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRL 536
           G +   W  D  +V V++++  HID  ++   +  WRFTGFYGNP ++ R++SW L+ RL
Sbjct: 534 GGLLLLW-NDDWEVSVKSFTSGHIDALVKCPGRELWRFTGFYGNPKASCRSESWRLLCRL 593

Query: 537 YDHNDSAWVLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCN 596
            D  D  W+ GGD NEIL  +EK  G DR ++ +  F+ ALD C L DLGF G  FTW N
Sbjct: 594 KDLFDLPWICGGDFNEILSINEKKGGSDRSMSAMTEFQNALDRCSLADLGFEGQCFTWLN 653

Query: 597 RRDMGAQVSLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRR 656
           +R  GA V  RLDR+  N  + D+F  ++V N D+  SDHRPI  +LE    R R D ++
Sbjct: 654 KRQGGAHVQERLDRYFCNQRWHDLFPFVKVLNGDFLNSDHRPIVATLENVSRRQRYD-KK 713

Query: 657 RTCKFEEWWTRNEECSNIIRRAG-SWDCN-PRVPSLPIVLRSCASALGGWGSCQNKRLKA 660
           R  +FE  W ++ EC  II R+  S DC      SL  +   CA  LG W   +   L  
Sbjct: 714 RCFRFETHWLKDPECQEIINRSWLSLDCPLANQDSLIDIFGLCADQLGMWNKSKYGSLPR 773

[Close]

BLAST of Lcy07g003380 vs. NCBI nr
Match: KAF4381998.1 (hypothetical protein G4B88_006630 [Cannabis sativa])

HSP 1 Score: 198.4 bits (503), Expect = 2.2e-46
Identity = 176/614 (28.66%), Postives = 264/614 (43.00%), Query Frame = 0


Query: 117 EEITSVTADRDAGASLRIRVRIDLSRPIRRGIQIYPDGSLSELWVPFRYERLPELCSLCG 176
           E I  +   +    ++++RVR+++  P++RG+++  D   +E+ + F+Y+ LP+ C  CG
Sbjct: 150 ERIGKLEDIKIVNGTMKVRVRMNIIEPLKRGLRVAIDDQGNEVSLIFQYDHLPDFCYDCG 209

Query: 177 IIGHVSRDCAI-SIRSDRGSGSIPLYGDWL-----------RFSGK-------GMILNHF 236
           IIGH + DC +     D        +G WL           RF+ +         I+   
Sbjct: 210 IIGHKALDCPLKDFAGDNPQFDSGRFGSWLCAPSSPPRDSFRFNKRRPESPTNRPIMTMG 269

Query: 237 TARDVDRASVREPPRSHHLAIE-VAPMS-----------------------SSAVPIDEL 296
            A  +  A  R  PR   L  E +AP S                          VP +  
Sbjct: 270 EASKIISAVERSRPRFSGLTPEQLAPTSVLEGRERDEDGLTGNGIDRGSGGEPEVPSESR 329

Query: 297 PRQAQRGIRISEPSEEQFRRGSAKGSPVLYSLSRGPNVSA-----KGKE----------- 356
            R A  G    + S E F+    +       +  G +V+      K KE           
Sbjct: 330 VRSAGDG--HDDRSSEGFQGNIERKGKATTVICEGEDVNGLAELLKSKEVHPCEAWDASS 389

Query: 357 KVVEVANVTVPRFPIPVTVTTKETAKS---MQPLDEGPSDFGRAFRAN-NLRLSDSVMSL 416
             V V N        P    +KE  K    + P  +    F  AF+      L       
Sbjct: 390 VGVTVENCEEINGGGPSKDRSKEINKGKGILLPSSQEELSFSHAFQHTFEPILKAQKSKT 449

Query: 417 FNSSSSMLGDSETG------------LENNVEEDGLVESDPEM-------------SEEI 476
           +  ++S  G S  G            L + +  + L +  P               +E  
Sbjct: 450 WKRANSSTGRSSKGKPKSSSFPISPKLSHVIVANALNKLSPRSGCDSKRKMDVEYNNESS 509

Query: 477 GPMGFRWERDGIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRL 536
           G +   W  D  +V V++++  HID  ++   +  WRFTGFYGNP ++ R++SW L+ RL
Sbjct: 510 GGLLLLW-NDDWEVSVKSFTSGHIDALVKCPGRELWRFTGFYGNPKASCRSESWRLLCRL 569

Query: 537 YDHNDSAWVLGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCN 596
            D  D  W+ GGD NEIL  +EK  G DR ++ +  F+ ALD C L DLGF G  FTW N
Sbjct: 570 KDLFDLPWICGGDFNEILSINEKKGGSDRSMSAMTEFQNALDRCSLADLGFEGQCFTWLN 629

Query: 597 RRDMGAQVSLRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRR 638
           +R  GA V  RLDR+  N  + D+F  ++V N D+  SDHRPI  +LE    R R D ++
Sbjct: 630 KRQGGAHVQERLDRYFCNQRWHDLFPFVKVLNGDFLNSDHRPIVATLENVSRRQRYD-KK 689

[Close]

BLAST of Lcy07g003380 vs. NCBI nr
Match: KAF4349753.1 (hypothetical protein G4B88_029501, partial [Cannabis sativa])

HSP 1 Score: 194.5 bits (493), Expect = 3.1e-45
Identity = 111/320 (34.69%), Postives = 171/320 (53.44%), Query Frame = 0


Query: 398 DGIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRLYDHNDSAWV 457
           D  +V V+++S+ HID  ++   +R WRFTGFYGNP ++ R+ SW L+ RL D     W+
Sbjct: 4   DDWEVSVKSFSVGHIDALVQCPGRRLWRFTGFYGNPKASSRSDSWRLLCRLKDLFALPWI 63

Query: 458 LGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCNRRDMGAQVS 517
            GGD NEIL   EK  G DR ++ +  F++ALD C L D+G+ G  FTW N+R   A V 
Sbjct: 64  CGGDFNEILSISEKKGGADRSLSAMAEFQQALDKCSLVDMGYDGQCFTWLNKRQGAAHVQ 123

Query: 518 LRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRRRTCKFEEWW 577
            RLDRF  N ++ ++F +  V   D+  SDHRP+  +LE    R+++ +++R  +FE  W
Sbjct: 124 ERLDRFCCNQDWHELFPSGNVCTGDFIHSDHRPVVATLE-NVVRVQKKDKKRGFRFETHW 183

Query: 578 TRNEECSNIIRRAGSWDCNP--RVPSLPIVLRSCASALGGWGSCQNKRLKANIREGDLDE 637
            ++EEC +I+ ++ +    P     S+  +   CA  LG W   +NK             
Sbjct: 184 LKDEECHDIVHQSWAAQDGPLESQESIIDIFGRCADRLGTWN--KNK------------- 243

Query: 638 VINCVPRKVTEEMNQMLMAPYSREEGFVWGRDMLKAGIRKNLGNGQSIKLFCDPWIPRLT 697
               +P+                         +L +G+RK +G+G+S+  F DPW+PR  
Sbjct: 244 -FGSIPKL------------------------LLNSGMRKVVGDGRSVNAFRDPWVPRPR 280

Query: 698 TFRVVSPPPVAMENSIVADF 715
           +FR +SP P   E  +V+DF
Sbjct: 304 SFRPISPAPT--EGLMVSDF 280

[Close]

BLAST of Lcy07g003380 vs. NCBI nr
Match: KAF4363712.1 (hypothetical protein G4B88_030211, partial [Cannabis sativa])

HSP 1 Score: 190.3 bits (482), Expect = 5.9e-44
Identity = 110/320 (34.38%), Postives = 168/320 (52.50%), Query Frame = 0


Query: 398 DGIDVIVRNYSIHHIDVDIEWNNKR-WRFTGFYGNPDSNLRNQSWNLMRRLYDHNDSAWV 457
           D  +V V+++S+ HID  ++   +R WRFTGFYGNP ++ R+ SW L+ RL D     W+
Sbjct: 4   DDWEVSVKSFSVGHIDALVQCPGRRLWRFTGFYGNPKASSRSDSWRLLCRLKDLFALPWI 63

Query: 458 LGGDLNEILWQDEKARGPDREINQILAFREALDDCHLRDLGFSGGKFTWCNRRDMGAQVS 517
            GGD NEIL   EK  G DR ++ +  F++ALD C L D+G+ G  FTW N+R   A V 
Sbjct: 64  CGGDFNEILSITEKKGGADRSLSAMSEFQQALDKCSLVDMGYDGQCFTWLNKRQGAAHVQ 123

Query: 518 LRLDRFIANANFCDMFETLQVRNLDWAKSDHRPIELSLEGRGNRIRRDNRRRTCKFEEWW 577
            RLDRF  N ++ D+F +  V   D+  SDHRP+  +LE    R+++ +++R  +FE  W
Sbjct: 124 ERLDRFCCNQDWHDLFPSGNVCTGDFIHSDHRPVVATLE-NVVRVQKKDKKRGFRFETHW 183

Query: 578 TRNEECSNIIRRAGSWDCNP--RVPSLPIVLRSCASALGGWGSCQNKRLKANIREGDLDE 637
            ++EEC +I+ ++ S    P     S+  +   CA  LG W   +               
Sbjct: 184 LKDEECHDIVHQSWSAQDGPLESQDSIIDIFGRCADRLGAWNKSK--------------- 243

Query: 638 VINCVPRKVTEEMNQMLMAPYSREEGFVWGRDMLKAGIRKNLGNGQSIKLFCDPWIPRLT 697
               +P+ V E   Q+               D+L+        +G+S+  F DPW+PR  
Sbjct: 244 -FGSIPKLVRETQKQL--------------DDLLR--------DGRSVDAFRDPWVPRPR 282

Query: 698 TFRVVSPPPVAMENSIVADF 715
           +FR +SP P   +  +V+DF
Sbjct: 304 SFRPISPAPT--DGIMVSDF 282

The following BLAST results are available for this feature:

BLAST of Lcy07g003380 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g003380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P9EM92	1.8e-54	32.53	uncharacterized protein LOC108979776 OS=Juglans regia OX=51240 GN=LOC108979776 P...	[more]
A0A7J6GL46	4.7e-47	28.42	CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_014122 P...	[more]
A0A7J6GGL8	1.0e-46	28.66	CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_006630 P...	[more]
A0A2N9G189	3.1e-46	28.40	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2080...	[more]
A0A7J6DUI7	1.5e-45	34.69	Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_029501 PE...	[more]

BLAST of Lcy07g003380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_035545013.1	3.7e-54	32.53	uncharacterized protein LOC108979776 [Juglans regia]	[more]
KAF4383622.1	9.7e-47	28.42	hypothetical protein F8388_014122 [Cannabis sativa]	[more]
KAF4381998.1	2.2e-46	28.66	hypothetical protein G4B88_006630 [Cannabis sativa]	[more]
KAF4349753.1	3.1e-45	34.69	hypothetical protein G4B88_029501, partial [Cannabis sativa]	[more]
KAF4363712.1	5.9e-44	34.38	hypothetical protein G4B88_030211, partial [Cannabis sativa]	[more]

BLAST of Lcy07g003380 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 393..554 e-value: 1.2E-18 score: 69.8
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 399..554
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 138..186 e-value: 2.1E-12 score: 46.6
None	No IPR available	PANTHER	PTHR33710:SF41	BNAC03G48920D PROTEIN	coord: 409..637
None	No IPR available	PANTHER	PTHR33710	BNAC02G09200D PROTEIN	coord: 409..637
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 172..185 score: 8.581337

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g003380.1	Lcy07g003380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding