Lcy07g003350 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTAGTCCAAATGCTAATGTGGATCTAGTCCAAAAGGCCAAGGATGTTTTGCAGGTTAACTTCACGGAAAGCTTAGGGCAATATCTTGGGCTTCCTTCGCAGAACGCTCGGAAGAAGAAGGAAATTTTCAACAATATTAAAGATCGAGTTTGGAGAGCATTACAAGGATGGAAAGGACGCTTTTTCTCAGCTACAGGAAGAGAGATCCTGATAAAAGCAGTGGCTCAAGCCATTCCAAACTACGCTATGAATTGTTTTAAATTTCCTGTGTCATTAACTAATGAGTTAAATTCAATGTGTGCTAGGTTCTGGTGGGGAGCAGGGGAGACAGAGAGAAGGATTCATTGGAAGAGTTGGTAA ATGACTAGTCCAAATGCTAATGTGGATCTAGTCCAAAAGGCCAAGGATGTTTTGCAGGTTAACTTCACGGAAAGCTTAGGGCAATATCTTGGGCTTCCTTCGCAGAACGCTCGGAAGAAGAAGGAAATTTTCAACAATATTAAAGATCGAGTTTGGAGAGCATTACAAGGATGGAAAGGACGCTTTTTCTCAGCTACAGGAAGAGAGATCCTGATAAAAGCAGTGGCTCAAGCCATTCCAAACTACGCTATGAATTGTTTTAAATTTCCTGTGTCATTAACTAATGAGTTAAATTCAATGTGTGCTAGGTTCTGGTGGGGAGCAGGGGAGACAGAGAGAAGGATTCATTGGAAGAGTTGGTAA ATGACTAGTCCAAATGCTAATGTGGATCTAGTCCAAAAGGCCAAGGATGTTTTGCAGGTTAACTTCACGGAAAGCTTAGGGCAATATCTTGGGCTTCCTTCGCAGAACGCTCGGAAGAAGAAGGAAATTTTCAACAATATTAAAGATCGAGTTTGGAGAGCATTACAAGGATGGAAAGGACGCTTTTTCTCAGCTACAGGAAGAGAGATCCTGATAAAAGCAGTGGCTCAAGCCATTCCAAACTACGCTATGAATTGTTTTAAATTTCCTGTGTCATTAACTAATGAGTTAAATTCAATGTGTGCTAGGTTCTGGTGGGGAGCAGGGGAGACAGAGAGAAGGATTCATTGGAAGAGTTGGTAA MTSPNANVDLVQKAKDVLQVNFTESLGQYLGLPSQNARKKKEIFNNIKDRVWRALQGWKGRFFSATGREILIKAVAQAIPNYAMNCFKFPVSLTNELNSMCARFWWGAGETERRIHWKSW Homology
BLAST of Lcy07g003350 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.6e-08 Identity = 27/89 (30.34%), Postives = 45/89 (50.56%), Query Frame = 0
BLAST of Lcy07g003350 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 6.4e-34 Identity = 66/120 (55.00%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Lcy07g003350 vs. ExPASy TrEMBL
Match: A0A2N9HTH6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42962 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.3e-28 Identity = 62/116 (53.45%), Postives = 75/116 (64.66%), Query Frame = 0
BLAST of Lcy07g003350 vs. ExPASy TrEMBL
Match: A0A2N9H567 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34870 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.3e-28 Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of Lcy07g003350 vs. ExPASy TrEMBL
Match: A0A803Q328 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 6.9e-28 Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of Lcy07g003350 vs. ExPASy TrEMBL
Match: A0A803PYQ3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 0
BLAST of Lcy07g003350 vs. NCBI nr
Match: XP_022145148.1 (uncharacterized protein LOC111014662 [Momordica charantia]) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33 Identity = 66/120 (55.00%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of Lcy07g003350 vs. NCBI nr
Match: XP_030941688.1 (uncharacterized protein LOC115966628 [Quercus lobata]) HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28 Identity = 65/118 (55.08%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of Lcy07g003350 vs. NCBI nr
Match: XP_030924923.1 (uncharacterized protein LOC115951949 [Quercus lobata]) HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28 Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 0
BLAST of Lcy07g003350 vs. NCBI nr
Match: XP_030931246.1 (uncharacterized protein LOC115957168 [Quercus lobata]) HSP 1 Score: 134.0 bits (336), Expect = 8.4e-28 Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of Lcy07g003350 vs. NCBI nr
Match: XP_030923826.1 (uncharacterized protein LOC115950728 [Quercus lobata]) HSP 1 Score: 134.0 bits (336), Expect = 8.4e-28 Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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