Lcy07g003010 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g003010
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDUF1985 domain-containing protein
LocationChr07: 12097249 .. 12097508 (-)
RNA-Seq ExpressionLcy07g003010
SyntenyLcy07g003010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGCTTTGTTTGGAAAAGTGGAGTCTTATAAGGAGAGATCAGATGGTAAACAGGAGATGTATAGTCTTTATGGCTTCCCATACGCGTTTCAGGTTAGCAAACCTTCTTCATATTTAGGGTTTCCTTTTAATGATTATATTGTTACTAACACTATATTTTAATTATATGTATAGGTATGGACGTGTGAGACTGTTTCGTCGTTAATTGGACGTGTTGCTAACCGCGTTCGCGAAAATGCCATTCCTCGGATTCTTAGATG

mRNA sequence

AAAGCTTTGTTTGGAAAAGTGGAGTCTTATAAGGAGAGATCAGATGGTAAACAGGAGATGTATAGTCTTTATGGCTTCCCATACGCGTTTCAGGTATGGACGTGTGAGACTGTTTCGTCGTTAATTGGACGTGTTGCTAACCGCGTTCGCGAAAATGCCATTCCTCGGATTCTTAGATG

Coding sequence (CDS)

AAAGCTTTGTTTGGAAAAGTGGAGTCTTATAAGGAGAGATCAGATGGTAAACAGGAGATGTATAGTCTTTATGGCTTCCCATACGCGTTTCAGGTATGGACGTGTGAGACTGTTTCGTCGTTAATTGGACGTGTTGCTAACCGCGTTCGCGAAAATGCCATTCCTCGGATTCTTAGATG

Protein sequence

KALFGKVESYKERSDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRILR
Homology
BLAST of Lcy07g003010 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.9e-09
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0

Query: 2   ALFGKVESYKER---SDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRIL 60
           AL  KVE+YK++        E YSLYGFPYAFQVW  ET+S+L  RVA R+ ++AIPR+L
Sbjct: 44  ALKDKVEAYKQKVAIDSSHVETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLL 103

BLAST of Lcy07g003010 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.7e-08
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 2   ALFGKVESYKER---SDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRIL 60
           AL  KVE YK++        E YSLY FPYAFQVW  ET+S+L  RVA R+ ++AIPR+L
Sbjct: 203 ALKDKVEXYKQKVAMDSSHVETYSLYXFPYAFQVWAYETISTLSTRVALRLNDDAIPRLL 262

BLAST of Lcy07g003010 vs. ExPASy TrEMBL
Match: A0A6J1C463 (uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008328 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-06
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 19 EMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRILR 60
          E YSLYGFPYAFQVW  ET+S+L  RVA R+ ++AIPR+LR
Sbjct: 7  ETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLR 47

BLAST of Lcy07g003010 vs. ExPASy TrEMBL
Match: A0A6J1DWS4 (uncharacterized protein LOC111025136 OS=Momordica charantia OX=3673 GN=LOC111025136 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.2e-06
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 11  KERSDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRILR 60
           K R  G ++ YSLYGFP+AFQVW  ET+S L  RVA+ ++ + +PRIL+
Sbjct: 143 KGRDGGLRKTYSLYGFPWAFQVWGYETISCLTSRVAHPIKPDGVPRILK 191

BLAST of Lcy07g003010 vs. ExPASy TrEMBL
Match: A0A6J1E0A9 (uncharacterized protein LOC111025209 OS=Momordica charantia OX=3673 GN=LOC111025209 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-05
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 9   SYKERSDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRILR 60
           S K +  G ++ YSLYGFP+AFQVW  E +SSL G +   V ++ +PRIL+
Sbjct: 181 SNKSKEGGLRKSYSLYGFPWAFQVWAYEIISSLSGHIVTIVSQDVVPRILQ 231

BLAST of Lcy07g003010 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0

Query: 2   ALFGKVESYKER---SDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRIL 60
           AL  KVE+YK++        E YSLYGFPYAFQVW  ET+S+L  RVA R+ ++AIPR+L
Sbjct: 44  ALKDKVEAYKQKVAIDSSHVETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLL 103

BLAST of Lcy07g003010 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-07
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 2   ALFGKVESYKER---SDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRIL 60
           AL  KVE YK++        E YSLY FPYAFQVW  ET+S+L  RVA R+ ++AIPR+L
Sbjct: 203 ALKDKVEXYKQKVAMDSSHVETYSLYXFPYAFQVWAYETISTLSTRVALRLNDDAIPRLL 262

BLAST of Lcy07g003010 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-06
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0

Query: 19 EMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRILR 60
          E YSLYGFPYAFQVW  ET+S+L  RVA R+ ++AIPR+LR
Sbjct: 7  ETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLR 47

BLAST of Lcy07g003010 vs. NCBI nr
Match: XP_022158673.1 (uncharacterized protein LOC111025136 [Momordica charantia])

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-05
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0

Query: 11  KERSDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRILR 60
           K R  G ++ YSLYGFP+AFQVW  ET+S L  RVA+ ++ + +PRIL+
Sbjct: 143 KGRDGGLRKTYSLYGFPWAFQVWGYETISCLTSRVAHPIKPDGVPRILK 191

BLAST of Lcy07g003010 vs. NCBI nr
Match: XP_022158744.1 (uncharacterized protein LOC111025209 [Momordica charantia])

HSP 1 Score: 57.4 bits (137), Expect = 4.9e-05
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0

Query: 9   SYKERSDGKQEMYSLYGFPYAFQVWTCETVSSLIGRVANRVRENAIPRILR 60
           S K +  G ++ YSLYGFP+AFQVW  E +SSL G +   V ++ +PRIL+
Sbjct: 181 SNKSKEGGLRKSYSLYGFPWAFQVWAYEIISSLSGHIVTIVSQDVVPRILQ 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DL407.9e-0957.38uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DRZ78.7e-0855.74uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1C4631.3e-0668.29uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1DWS46.2e-0653.06uncharacterized protein LOC111025136 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1E0A92.4e-0549.02uncharacterized protein LOC111025209 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
Match NameE-valueIdentityDescription
XP_022154965.11.6e-0857.38uncharacterized protein LOC111022110 [Momordica charantia][more]
XP_022157020.11.8e-0755.74uncharacterized protein LOC111023847 [Momordica charantia][more]
XP_022136676.12.6e-0668.29uncharacterized protein LOC111008328 [Momordica charantia][more]
XP_022158673.11.3e-0553.06uncharacterized protein LOC111025136 [Momordica charantia][more]
XP_022158744.14.9e-0549.02uncharacterized protein LOC111025209 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g003010.1Lcy07g003010.1mRNA