Lcy07g002820 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCAAACTGAAACTCAGAAACCCCAAATTCCAACCATGCTCGACGTTGCTGCCATTGGCTCCACCTATTCCGCCGCTCTCTCCTTTCAATCTCGCCATTCAAAATGCTCCAACCTCCGCCATCAATGGCGCATCAGAGCTTCCTCTGCTGCCTCCACTGTCGATCTCGCCGCTCTTCGATCCGCCATCGACAAGGTTCAATTCCTCCGCTTAAATTAATTTATCTGCCATTGATGACTCACACGATTTCTCTTTTCAAAATGCAGAAAGACAGTGACGCTGTTAAGGAGGCGCTCGATCAGTTGAGGGAAGTTGGTTGGGCCAAGAAATGGAGTTCTCAGCCGTATGTCTCGCGCCGTACGGTCAGTCTCCATTTCAACTCTGAATAACATTCAATATAAGTTGATGTTTAGCATGTATGCCTCTCTGTAAACCAGACCACTCTGCGAGAGCTGACAACGCTTGGAATTAAAAATGCAGAGAATCTTGCCATTCCTAGTGTCAGAAATGATGTGAGTTCTTTACCTTTAACCAGTTTTGGTCTTGAGATGATGAATTGTAGGTAGTAGGTACCCACCTCCAAAGATAATGTTGGAGTGGAGGATTATCATTGTATTACTTCAATTGTCTGTTTGTCCTGTTTACTTTTCTGGTTTTCTTTTGAACTTTTATGTGCTTTTGATGCTCTCAACACAGGCAGCTTTCCTTTTCACTGTGGTGGGAACGACTGGATTTTTGGGCGTCCTTGCTGGGCAGCTACCTGGGGTAACATAAACTGCATATTTTGTTGTTTAACTTGTTTGTTACTGAACAGTGAACATCATTTCCTTTTAACTGATGAACTGTATATTTGTTTATTTGTTCAAAGATCCTGAAATATTGTTAAGGCGAACTCATATTGAAATTTTGGATTCATAATAGGATTGGGGCTTCTTTGTGCCCTACTTGATTGGCAGCATATCGCTGATTGTTTTGGCTGTTGGAAGCATTTCTCCTGGGTAAAGTTTTACTTGCTGTGTTGTAGTTATCTCTTATCTCACATTTTCTTCAGTTGCTAGCTTCTCTTCCATGACATTGTGTATGTTTGTTGCCTCTCTCTTAGGCTTCTTCAAGCTGCCATAGATGGCTTTTCATCATTTTTTCCTGATTATCAAGAAAGAATTGCTGGACATGAAGCTGCACATTTCTTGGGTAAAGTCTTGTAGGAAAAGAAAAGTAATTACTGTCATGAGATCAAGATGGCGCCTATTTCACTTGGATCTAATAATGAACTCCTTTAAATTTTAGTTGCTTACTTGCTTGGACTTCCTATCCTGGATTATTCACTGGACATTGGGAAGGAGCATGTCAATCTCATTGATGAAAGATTAGAAAAATTGATATACAGTGGCCAGCTTGACGATAAGGAACTTGACAGGTAACTGATTTTTGGCTAATATTCTGAAGGATTGCAAAGTTCTGTTCTCTGGATCAAATTTAGTATGTGATAGTGATATTGATGCTAGTAGAAGCAAATAGTTCTGTAGATTTAGATTGTATGAATTGCAAAGTTGGGTAGCATTTTGTCAGGTTGGCAGTGGTGGCAATGGCTGGACTTGCAGCAGAAGGTTTAAAATATGATAAAGTGGTTGGCCAATCTGCTGATCTCTTCACTCTGCAGGTTTCAGATTGCTACTTGATTCATGAAACAGACCCTCTACCCCTTCTCTCTTCAACAATCTAACGTTTACATTGATTTTGTTCTATCAGCGGTTTATCAATAGATCGAAACCAAAACTTGGTAAGGATCAGCAACAAAACCTGACCAGATGGGCTGTAAGTAGTCAACTATCACGACTCTGGATAGTTTCTTGGGTGTTTAGCATATTCATTTGATCATTTCCAAGTAGTACATTAACAGCTTTTAAGAAAAGCTCGTATTAGTGACTGAATACTGATGCAAATTTCGTGGGAACTTTGCTGTAGGTTTTGTTTTCTGGTTCCCTTCTGAAGAATAACAAATCGATACATGAAGCCCTCATCAAAGCAATGTCAGAGAAAGCATCTGTAATAGAATGCTTTGAAGCAATTGAGAAAGCTGTCTAGCTGATTCCAACTTTTTTCTTTCTTGGGGTTCTTAATCTGCAATGTTCACCATTCTTTATTTTATATAGATAAATAAATACACATATTTATATCTGTAGAGAAAGAGAGAGAAAGAGAGAGGGGCTAGATTCTCTTATGCTGTTCTTTACCTTATTTCCCTGCTCCTGAATCCAAATTATTTCAATGAGTAAGGTGAGAAAAGTTTGCAGTTTGGATGGTACAAACATCAAGAGTCGCAAAAGAACACTAGTTGAAATTGTGAAACACGAAGACTCGAGCAAGAAAAAATAGGGTACTGAAACTTGCACGACGAAACAAAAACTGTACCTCCTGTTTCTTTCCTTTGTTGGCGATTACTTGAAGATAAGAAAAACTCTTCTATACTTGAAGTCCAGTTGATCTTCAATCATTCTTGTAATTGCATCTTCCATCAAATTCTTATAAATATTTTGACTCACCATTGATGCAGTA GTCCAAACTGAAACTCAGAAACCCCAAATTCCAACCATGCTCGACGTTGCTGCCATTGGCTCCACCTATTCCGCCGCTCTCTCCTTTCAATCTCGCCATTCAAAATGCTCCAACCTCCGCCATCAATGGCGCATCAGAGCTTCCTCTGCTGCCTCCACTGTCGATCTCGCCGCTCTTCGATCCGCCATCGACAAGAAAGACAGTGACGCTGTTAAGGAGGCGCTCGATCAGTTGAGGGAAGTTGGTTGGGCCAAGAAATGGAGTTCTCAGCCGTATGTCTCGCGCCGTACGACCACTCTGCGAGAGCTGACAACGCTTGGAATTAAAAATGCAGAGAATCTTGCCATTCCTAGTGTCAGAAATGATGCAGCTTTCCTTTTCACTGTGGTGGGAACGACTGGATTTTTGGGCGTCCTTGCTGGGCAGCTACCTGGGGATTGGGGCTTCTTTGTGCCCTACTTGATTGGCAGCATATCGCTGATTGTTTTGGCTGTTGGAAGCATTTCTCCTGGGCTTCTTCAAGCTGCCATAGATGGCTTTTCATCATTTTTTCCTGATTATCAAGAAAGAATTGCTGGACATGAAGCTGCACATTTCTTGGTTGCTTACTTGCTTGGACTTCCTATCCTGGATTATTCACTGGACATTGGGAAGGAGCATGTCAATCTCATTGATGAAAGATTAGAAAAATTGATATACAGTGGCCAGCTTGACGATAAGGAACTTGACAGGTTGGCAGTGGTGGCAATGGCTGGACTTGCAGCAGAAGGTTTAAAATATGATAAAGTGGTTGGCCAATCTGCTGATCTCTTCACTCTGCAGCGGTTTATCAATAGATCGAAACCAAAACTTGGTAAGGATCAGCAACAAAACCTGACCAGATGGGCTGTTTTGTTTTCTGGTTCCCTTCTGAAGAATAACAAATCGATACATGAAGCCCTCATCAAAGCAATGTCAGAGAAAGCATCTGTAATAGAATGCTTTGAAGCAATTGAGAAAGCTGTCTAGCTGATTCCAACTTTTTTCTTTCTTGGGGTTCTTAATCTGCAATGTTCACCATTCTTTATTTTATATAGATAAATAAATACACATATTTATATCTGTAGAGAAAGAGAGAGAAAGAGAGAGGGGCTAGATTCTCTTATGCTGTTCTTTACCTTATTTCCCTGCTCCTGAATCCAAATTATTTCAATGAGTAAGGTGAGAAAAGTTTGCAGTTTGGATGGTACAAACATCAAGAGTCGCAAAAGAACACTAGTTGAAATTGTGAAACACGAAGACTCGAGCAAGAAAAAATAGGGTACTGAAACTTGCACGACGAAACAAAAACTGTACCTCCTGTTTCTTTCCTTTGTTGGCGATTACTTGAAGATAAGAAAAACTCTTCTATACTTGAAGTCCAGTTGATCTTCAATCATTCTTGTAATTGCATCTTCCATCAAATTCTTATAAATATTTTGACTCACCATTGATGCAGTA ATGCTCGACGTTGCTGCCATTGGCTCCACCTATTCCGCCGCTCTCTCCTTTCAATCTCGCCATTCAAAATGCTCCAACCTCCGCCATCAATGGCGCATCAGAGCTTCCTCTGCTGCCTCCACTGTCGATCTCGCCGCTCTTCGATCCGCCATCGACAAGAAAGACAGTGACGCTGTTAAGGAGGCGCTCGATCAGTTGAGGGAAGTTGGTTGGGCCAAGAAATGGAGTTCTCAGCCGTATGTCTCGCGCCGTACGACCACTCTGCGAGAGCTGACAACGCTTGGAATTAAAAATGCAGAGAATCTTGCCATTCCTAGTGTCAGAAATGATGCAGCTTTCCTTTTCACTGTGGTGGGAACGACTGGATTTTTGGGCGTCCTTGCTGGGCAGCTACCTGGGGATTGGGGCTTCTTTGTGCCCTACTTGATTGGCAGCATATCGCTGATTGTTTTGGCTGTTGGAAGCATTTCTCCTGGGCTTCTTCAAGCTGCCATAGATGGCTTTTCATCATTTTTTCCTGATTATCAAGAAAGAATTGCTGGACATGAAGCTGCACATTTCTTGGTTGCTTACTTGCTTGGACTTCCTATCCTGGATTATTCACTGGACATTGGGAAGGAGCATGTCAATCTCATTGATGAAAGATTAGAAAAATTGATATACAGTGGCCAGCTTGACGATAAGGAACTTGACAGGTTGGCAGTGGTGGCAATGGCTGGACTTGCAGCAGAAGGTTTAAAATATGATAAAGTGGTTGGCCAATCTGCTGATCTCTTCACTCTGCAGCGGTTTATCAATAGATCGAAACCAAAACTTGGTAAGGATCAGCAACAAAACCTGACCAGATGGGCTGTTTTGTTTTCTGGTTCCCTTCTGAAGAATAACAAATCGATACATGAAGCCCTCATCAAAGCAATGTCAGAGAAAGCATCTGTAATAGAATGCTTTGAAGCAATTGAGAAAGCTGTCTAG MLDVAAIGSTYSAALSFQSRHSKCSNLRHQWRIRASSAASTVDLAALRSAIDKKDSDAVKEALDQLREVGWAKKWSSQPYVSRRTTTLRELTTLGIKNAENLAIPSVRNDAAFLFTVVGTTGFLGVLAGQLPGDWGFFVPYLIGSISLIVLAVGSISPGLLQAAIDGFSSFFPDYQERIAGHEAAHFLVAYLLGLPILDYSLDIGKEHVNLIDERLEKLIYSGQLDDKELDRLAVVAMAGLAAEGLKYDKVVGQSADLFTLQRFINRSKPKLGKDQQQNLTRWAVLFSGSLLKNNKSIHEALIKAMSEKASVIECFEAIEKAV Homology
BLAST of Lcy07g002820 vs. ExPASy TrEMBL
Match: A0A6J1EIT3 (uncharacterized protein LOC111434945 OS=Cucurbita moschata OX=3662 GN=LOC111434945 PE=4 SV=1) HSP 1 Score: 589.7 bits (1519), Expect = 7.3e-165 Identity = 307/321 (95.64%), Postives = 313/321 (97.51%), Query Frame = 0
BLAST of Lcy07g002820 vs. ExPASy TrEMBL
Match: A0A6J1I421 (uncharacterized protein LOC111470395 OS=Cucurbita maxima OX=3661 GN=LOC111470395 PE=4 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164 Identity = 306/321 (95.33%), Postives = 313/321 (97.51%), Query Frame = 0
BLAST of Lcy07g002820 vs. ExPASy TrEMBL
Match: A0A5D3CRP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002280 PE=4 SV=1) HSP 1 Score: 577.4 bits (1487), Expect = 3.7e-161 Identity = 301/322 (93.48%), Postives = 311/322 (96.58%), Query Frame = 0
BLAST of Lcy07g002820 vs. ExPASy TrEMBL
Match: A0A1S3C771 (uncharacterized protein LOC103497464 OS=Cucumis melo OX=3656 GN=LOC103497464 PE=4 SV=1) HSP 1 Score: 577.4 bits (1487), Expect = 3.7e-161 Identity = 301/322 (93.48%), Postives = 311/322 (96.58%), Query Frame = 0
BLAST of Lcy07g002820 vs. ExPASy TrEMBL
Match: A0A0A0LJM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G296000 PE=4 SV=1) HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160 Identity = 300/322 (93.17%), Postives = 310/322 (96.27%), Query Frame = 0
BLAST of Lcy07g002820 vs. NCBI nr
Match: XP_022928042.1 (uncharacterized protein LOC111434945 [Cucurbita moschata] >KAG6571396.1 hypothetical protein SDJN03_30311, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011162.1 hypothetical protein SDJN02_27960 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 589.7 bits (1519), Expect = 1.5e-164 Identity = 307/321 (95.64%), Postives = 313/321 (97.51%), Query Frame = 0
BLAST of Lcy07g002820 vs. NCBI nr
Match: XP_022971726.1 (uncharacterized protein LOC111470395 [Cucurbita maxima]) HSP 1 Score: 589.0 bits (1517), Expect = 2.6e-164 Identity = 306/321 (95.33%), Postives = 313/321 (97.51%), Query Frame = 0
BLAST of Lcy07g002820 vs. NCBI nr
Match: XP_023512717.1 (uncharacterized protein LOC111777385 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 588.2 bits (1515), Expect = 4.4e-164 Identity = 306/321 (95.33%), Postives = 312/321 (97.20%), Query Frame = 0
BLAST of Lcy07g002820 vs. NCBI nr
Match: XP_038900619.1 (uncharacterized protein LOC120087791 isoform X1 [Benincasa hispida]) HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161 Identity = 305/322 (94.72%), Postives = 312/322 (96.89%), Query Frame = 0
BLAST of Lcy07g002820 vs. NCBI nr
Match: XP_008457887.1 (PREDICTED: uncharacterized protein LOC103497464 [Cucumis melo] >KAA0045883.1 uncharacterized protein E6C27_scaffold243G004190 [Cucumis melo var. makuwa] >TYK13704.1 uncharacterized protein E5676_scaffold299G002280 [Cucumis melo var. makuwa]) HSP 1 Score: 577.4 bits (1487), Expect = 7.7e-161 Identity = 301/322 (93.48%), Postives = 311/322 (96.58%), Query Frame = 0
BLAST of Lcy07g002820 vs. TAIR 10
Match: AT2G21960.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 470.3 bits (1209), Expect = 1.2e-132 Identity = 236/286 (82.52%), Postives = 264/286 (92.31%), Query Frame = 0
BLAST of Lcy07g002820 vs. TAIR 10
Match: AT1G56180.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27290.1); Has 436 Blast hits to 436 proteins in 83 species: Archae - 0; Bacteria - 153; Metazoa - 0; Fungi - 0; Plants - 160; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17 Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 0
BLAST of Lcy07g002820 vs. TAIR 10
Match: AT5G27290.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 3.7e-12 Identity = 91/340 (26.76%), Postives = 148/340 (43.53%), Query Frame = 0
BLAST of Lcy07g002820 vs. TAIR 10
Match: AT5G27290.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 199 Blast hits to 194 proteins in 57 species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 1.2e-05 Identity = 69/261 (26.44%), Postives = 111/261 (42.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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