Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTGTTGTCTTGGAATGTGAGGGGTGTGGGGGGTAGATTCAAGCGGAGGTTGGTGAAAGAGACTATATCCCAAGAAAGTCCGAATATTGTCATTTTAGTGGAAACTAAGAGAGGTAGCGTTAATCGTCAATGGGTGAACAGTTTATGGGGTAATAGGTATGTGGATTGGGAGTCTCTAGAAGCTGAAGGGGCCTCTGGAGGCATTGCTATTTTATGGGATAGTAGGGTGGTTGCTCCGACTGAAGTCATAAAAGGTTTGTTCTCCGTGTCGATCTCTTTTCGGTTGAAGGATGGTGTTGTTAGCTAGGTGACGGGGGTTTACGACCCCCTAGTACTAGAGGTAGATCGGATTTTTGGAAGGAGTTGGGAGATCTTTCTGGTCTTTGTGGTGATTGTTGGTGCGTGGTTGGGGATTTTAATGTGATCCGAGCGCCCTCAGAAAGTCTTCGGGGGGTAGATATACTAGGTCCATGAAAAGATTCAATGAGTTCATTGATGGATCGTGCCTCACGGACCCTCCGTTAGTGAATGGGAGCTTCACTTGGGCCAATAGTCGGGTCAGAAGTAGGATTGATCGTTTTCTGTTGTCCAGGGGTTGGATGGAAGCCTTTAGCACGGTCAGACAAAGTTTGGGCCCTAGGGTGACCTCGGATCATTGGCCTTTAGTTCTCAATTCTGAGGATCTGAAATGGGGCCCTAGTCCCTTTAGGTTTGAAAATATGTGGATGAGTCACCCGTCCTTTAAATCCTCTCTCCCGGAGTGGTGGAATGGGGAGGGGAATGGTAAGTGGGAGGGGTATCGTTTTATGGGAAGATTGAGGGCTCTGAAGAAGGAGCTCAAAAAGGGGAACCAGGAGGTTTTTGGGGACTTTAGGCTTAGGAAAAAGGAAATTATGGGAAGGATCAAAGTTATTGATGACATGGAAGAGGAAGGTAGAGCGGAAGAGGGCATGAAGGAGGAAAGTCTCGCGTTAAAGATGGAGCTTGCCGAAGTCGTGCTTAAGGAGACCAGCATTTGGCAGCAAAAAGTAAAAATCAAATGGGCTAAGGAAGGTGACAGTAACTCGACTTTTTTTCATTGATGGGCTAACGGTAGGAAAAGCAAGAATTTCATTAACTCTTTGGAGAACGAGGTCGAGGATAAGCTTAAAGGGGAGAAGAAGATTGAGGAGGAAATCCTCACATTCTTCTCGAACCTTTATGGTCCCTCGGTGGAGTCCAAACCTTTTGTGGAACGGATAGACTGGAGTCCTATTATGGATCGCGAGAAGACGGATTTAAATTCCCCTTTTGCAGTGGAGGAAATTAGGAAAGTGGTCTTTGAGTGTGATAGGAATAAGTCCCCGAGTCTCGATGGGTTTTCGTTGGGCTTCTTCCAGGAGAATTTGGGAAGTCATTAAGACTGAGCTCTTGCGGGTTTTTAGAGAGTTTTATGAAAGAGGTATCCTTGATAGTTCCGTGAACGAGACTTTTGTGTGCTTGATTCCTAAGAAGGAGAAGGTACTTAGGGTGAAGGACTTTAGACCAGTCAATCTTGTGACGAGTGTCTATAAAATAATTGCTAAAGTCCTTGCTAACAGATTGAAAATAGTTCTTCCTTCCACGGTATCAGAGGAGCAGGGTGCTTTTATCTCAGGTAGACAAATTTTGGATCAAGCCCTCATTGCTAGTGAAGCCAATTAAGATTATAGGTCCTCTAAGAAGGAAGGTGTGATTTTTAAAATTGATTTTGAGAAGGCCTACGATCATGTGGACTGGAACTTTCTTAACAAAATCTTGGCTAAAAAGGGCTTTGGATACCGGTGGAGATCGTGGGTTTGGAGTTGTACGAGATCGGTGAGGTATTCGATTCTTGTGAATGGTAGCCCTAAAGTTACGTGGTGTCTAGAGGCCTTAGGCAAGGCGATCCCCTATCACCCTTTCTCTTCCTCCTAGTGGTGGATGCTCTTAGTAGAATGATATCTAAAGGGGTGGAGGGTGGGATTATTGAGGAATTCAAGGTGGGTAGGGAAGGTGTGTCTCTGTCCCATCTGCAGTTTGCCGATGATACGATATTCTTTTGCTCTGGTAAAGAGGAGTCCTTCCTGATCCTGAACCATATGCTGGGATTCTTTGAGTTAATGTCAGGATTGAAGATCAATAGAAGCAAAAGCCAAGTGATAGGTTTGAACTGTGATGATGCCAAAGTCGATAGGTGGGCCTCCTTAGTGGGTTGTGATGTGGGTGCGTTCCCGGTCTCCTATTTAGGTCTTCCTCTTGGTCACAATCCCAGGAGTCTTTCTTTCTGGAGCCCTGTGGAAGACAAGGTGAGAAGGAGGCTTGCCTCTTGGAAAAGAAGTTTCTTTTCTAAAGGTGGGAGGTTAACTCTTATTCGATCTGTTTTGAGTGGGATCCCAACTTACTTCTTCTCGCTGTTTAGAGCTCCCCAGAAGGTGTGTAGGAGTCTGGAGAAGTTCATGAGGGATTTCTTATGGAAGGGGGGAGAGTAGGTAAAGGGGCCCATCTAGTGAGTTGGGAGGTTGTGGGCAAGCCGATTTGTTTGGGGGGGTTAGAAATGGAAAATCTTAAGGTTCGCAACAAAGCCCTGTTAGCTAAATGGCTCTGGCGGTTCCCCTTAGAGTCTTCTTCCCTTTGGCATAGGATCATTGTGAGCAAATACGGTCCTCATCCTAATGAATGGTTGATGGGTGGGGGTAAAGGCACTTTCAGAAATCCATGGAAAGACATAGCCCCTCGAGATTCCTACCTTTTCTAGCCTTGTTCATTGTTTGGTGGGGGATGGGAAAGATATGTATTTCTGGGAAGACAGATGGTTGGGGGATAGACCCCTCTGTCTATCTTTCCCTCGTTTGTTCTATTTATCTTCCATTAAAAACCGTTCAATGACTGATGTTTTGTTTCATTCAGGGAGCTTTCCTTCATTTTCTTTTGGCTTCAGTCGTCCGTTGTACAATAGGGAAACGACGGATGTTGTGTCCCTTATGTCTTTGATTGAGGAGTTTGATTTCAGGGTGTGGAGGAGGGATTTTCGTTGTTGGAGCCCTAGTCCTTCAGGCGGGTTCTCTTGTAGCTCCCTTTTCCGTTGGCTATGCTCCCTTCTCCCTAAAGTGAGTCCATTTTTTCGCGAGTGTGGAAGGTTAAAGTCCCGAAGAAGATTAGGTTTTTTATGTGGCAAGTTATCCATGGCAGGGTTAATACCTACGATCGTCTGTTGAAAAGGATGCCCTCTTTGGTTGGTCCATTTTGCTGTATTCTGTGTCGGAAGGCGGAGGAAGATCTGGATCATATTCTGTGGAGTTGTGCCTTTGCGCGTGCTGCGTGGGATCGGTTTGGTCAGGTTTTTGGGTTGCAAGGGTTATCTTTTGCTGACCACAGGGAGATGATCGAGGAGTTCCTCCTCCATCCGCCATTTCGGGAGAGAGCGAGATTTTTGTGGTTCGGGGGGATGTGTGCTTTATTGTGGAATCTTTGGGGTGAGAGGAACAATAGAGTGTTTAGGGGGAGAGAGAGGGATCCTGAGGATGTCTGGTCCCTCACTCGTTATCATGTCTCTCTTTGGGCTTCGGTCTGTAAGATGTTTTGTAATTATCCGTTAAGTTGTATTTTGCTTGATTGGGTCCCTTTCTCTAGTTGGACTCCTTTTTGTGGGCTTGTTTTTTTGAATGCCCGTGTATTCTTTCATTTTTTTCTCAATGAAAGTTGGTTTTTCATAAAAAAAAAGAGTGGCACCTGGTTTATTTAGGAGTGTTTTAGCTTGTGTAAGTAGTTTCTACCTGGATAAGCCTGATTGTTTGTTTAAGCAAGTTGTTTATTTTACTTGTTCTGTTATTATATGTTGTGTTTGATATAAATGTAAGTCGTTATGTGAAATGAGCATGTCACTTTGTTTATTTCCATAAGCATGAGATACTGTTGTTAGTTGGCTATGTTGCATGTGAGTCATGTCTGCATAGTGTGTGGTCATTGGGGAAAGGCGGAGCGTGACGCGGAAATCACGTGTGGGTGTGAGTGCGGAGCGTGACGCGGAAATCACGTGTGAGTGGCGCTGAGCATGGCGCGTAATAATACATGTGTTGGGTGCGTTTGCAGAGCGTGACGCGGAAATCACGTGTGGGTTGTGAGTGCGGAGCGGACGCGGAAATCACGTGTGAATGTGCGGGCATGGCGCGGAAACCATGTGGGGGTGCATAG
mRNA sequence
ATGATTGTGTTGTCTTGGAATGTGAGGGGTGTGGGGGGTAGATTCAAGCGGAGGTTGGTGAAAGAGACTATATCCCAAGAAAGTCCGAATATTGTCATTTTAGTGGAAACTAAGAGAGGTAGCGTTAATCGTCAATGGGTGAACAGTTTATGGGGTAATAGGTATGTGGATTGGGAGTCTCTAGAAGCTGAAGGGGCCTCTGGAGGCATTGCTATTTTATGGGATAGTAGGGTGGTTGCTCCGACTGAAGTCATAAAAGCCTTTAGCACGGTCAGACAAAGTTTGGGCCCTAGGGTGACCTCGGATCATTGGCCTTTAGTTCTCAATTCTGAGGATCTGAAATGGGGCCCTAGTCCCTTTAGGTTTGAAAATATGTGGATGAGTCACCCGTCCTTTAAATCCTCTCTCCCGGAGTGGTGGAATGGGGAGGGGAATGGTAAGTGGGAGGGGTATCGTTTTATGGGAAGATTGAGGGCTCTGAAGAAGGAGCTCAAAAAGGGGAACCAGGAGGTTTTTGGGGACTTTAGGCTTAGGAAAAAGGAAATTATGGGAAGGATCAAAGTTATTGATGACATGGAAGAGGAAGGTAGAGCGGAAGAGGGCATGAAGGAGGAAAGTCTCGCGTTAAAGATGGAGCTTGCCGAAGTCGTGCTTAAGGAGACCAGCATTTGGCAGCAAAAAGTAAAAATCAAATGGGCTAAGGAAGGTGACATGGTGGATGCTCTTAGTAGAATGATATCTAAAGGGGTGGAGGGTGGGATTATTGAGGAATTCAAGGTGGGTAGGGAAGGTGTGTCTCTGTCCCATCTGCAGTTTGCCGATGATACGATATTCTTTTGCTCTGGTAAAGAGGAGTCCTTCCTGATCCTGAACCATATGCTGGGATTCTTTGAGTTAATGTCAGGATTGAAGATCAATAGAAGCAAAAGCCAAGTGATAGGTTTGAACTGTGATGATGCCAAAGTCGATAGGTGGGCCTCCTTAGTGGGTTGTGATGTGGGTGCGTTCCCGGTCTCCTATTTAGGTCTTCCTCTTGGTCACAATCCCAGGAGTCTTTCTTTCTGGAGCCCTGTGGAAGACAAGGTGAGAAGGAGGCTTGCCTCTTGGAAAAGAAGTTTCTTTTCTAAAGGTGGGAGGTTAACTCTTATTCGATCTGTTTTGAGTGGGATCCCAACTTACTTCTTCTCGCTGTTTAGAGCTCCCCAGAAGGTGTGTAGGAGTCTGGAGAAGTTCATGAGGGATTTCTTATGGAAGGGGGGAGAGATCATTGTGAGCAAATACGGTCCTCATCCTAATGAATGGTTGATGGGTGGGGGGTGTGGAGGAGGGATTTTCGTTGTTGGAGCCCTAGTCCTTCAGGCGGGTTCTCTTGTAGCTCCCTTTTCCGTTGGCTATGCTCCCTTCTCCCTAAAGGTTAATACCTACGATCGTCTGTTGAAAAGGATGCCCTCTTTGGTTGGTCCATTTTGCTGTATTCTGTGTCGGAAGGCGGAGGAAGATCTGGATCATATTCTGTGGAGTTGTGCCTTTGCGCGTGCTGCGTGGGATCGGTTTGGTCAGGTTTTTGGGTTGCAAGGGTTATCTTTTGCTGACCACAGGGAGATGATCGAGGAGTTCCTCCTCCATCCGCCATTTCGGGAGAGAGCGAGATTTTTGTGGTTCGGGGGGATGTGTGCTTTATTGTGGAATCTTTGGGGTGAGAGGAACAATAGAGTGTTTAGGGGGAGAGAGAGGGATCCTGAGGATGTCTGGTCCCTCACTCGTTATCATAGCGTGACGCGGAAATCACGTGTGGGTTGTGAGTGCGGAGCGGACGCGGAAATCACGTGTGAATGTGCGGGCATGGCGCGGAAACCATGTGGGGGTGCATAG
Coding sequence (CDS)
ATGATTGTGTTGTCTTGGAATGTGAGGGGTGTGGGGGGTAGATTCAAGCGGAGGTTGGTGAAAGAGACTATATCCCAAGAAAGTCCGAATATTGTCATTTTAGTGGAAACTAAGAGAGGTAGCGTTAATCGTCAATGGGTGAACAGTTTATGGGGTAATAGGTATGTGGATTGGGAGTCTCTAGAAGCTGAAGGGGCCTCTGGAGGCATTGCTATTTTATGGGATAGTAGGGTGGTTGCTCCGACTGAAGTCATAAAAGCCTTTAGCACGGTCAGACAAAGTTTGGGCCCTAGGGTGACCTCGGATCATTGGCCTTTAGTTCTCAATTCTGAGGATCTGAAATGGGGCCCTAGTCCCTTTAGGTTTGAAAATATGTGGATGAGTCACCCGTCCTTTAAATCCTCTCTCCCGGAGTGGTGGAATGGGGAGGGGAATGGTAAGTGGGAGGGGTATCGTTTTATGGGAAGATTGAGGGCTCTGAAGAAGGAGCTCAAAAAGGGGAACCAGGAGGTTTTTGGGGACTTTAGGCTTAGGAAAAAGGAAATTATGGGAAGGATCAAAGTTATTGATGACATGGAAGAGGAAGGTAGAGCGGAAGAGGGCATGAAGGAGGAAAGTCTCGCGTTAAAGATGGAGCTTGCCGAAGTCGTGCTTAAGGAGACCAGCATTTGGCAGCAAAAAGTAAAAATCAAATGGGCTAAGGAAGGTGACATGGTGGATGCTCTTAGTAGAATGATATCTAAAGGGGTGGAGGGTGGGATTATTGAGGAATTCAAGGTGGGTAGGGAAGGTGTGTCTCTGTCCCATCTGCAGTTTGCCGATGATACGATATTCTTTTGCTCTGGTAAAGAGGAGTCCTTCCTGATCCTGAACCATATGCTGGGATTCTTTGAGTTAATGTCAGGATTGAAGATCAATAGAAGCAAAAGCCAAGTGATAGGTTTGAACTGTGATGATGCCAAAGTCGATAGGTGGGCCTCCTTAGTGGGTTGTGATGTGGGTGCGTTCCCGGTCTCCTATTTAGGTCTTCCTCTTGGTCACAATCCCAGGAGTCTTTCTTTCTGGAGCCCTGTGGAAGACAAGGTGAGAAGGAGGCTTGCCTCTTGGAAAAGAAGTTTCTTTTCTAAAGGTGGGAGGTTAACTCTTATTCGATCTGTTTTGAGTGGGATCCCAACTTACTTCTTCTCGCTGTTTAGAGCTCCCCAGAAGGTGTGTAGGAGTCTGGAGAAGTTCATGAGGGATTTCTTATGGAAGGGGGGAGAGATCATTGTGAGCAAATACGGTCCTCATCCTAATGAATGGTTGATGGGTGGGGGGTGTGGAGGAGGGATTTTCGTTGTTGGAGCCCTAGTCCTTCAGGCGGGTTCTCTTGTAGCTCCCTTTTCCGTTGGCTATGCTCCCTTCTCCCTAAAGGTTAATACCTACGATCGTCTGTTGAAAAGGATGCCCTCTTTGGTTGGTCCATTTTGCTGTATTCTGTGTCGGAAGGCGGAGGAAGATCTGGATCATATTCTGTGGAGTTGTGCCTTTGCGCGTGCTGCGTGGGATCGGTTTGGTCAGGTTTTTGGGTTGCAAGGGTTATCTTTTGCTGACCACAGGGAGATGATCGAGGAGTTCCTCCTCCATCCGCCATTTCGGGAGAGAGCGAGATTTTTGTGGTTCGGGGGGATGTGTGCTTTATTGTGGAATCTTTGGGGTGAGAGGAACAATAGAGTGTTTAGGGGGAGAGAGAGGGATCCTGAGGATGTCTGGTCCCTCACTCGTTATCATAGCGTGACGCGGAAATCACGTGTGGGTTGTGAGTGCGGAGCGGACGCGGAAATCACGTGTGAATGTGCGGGCATGGCGCGGAAACCATGTGGGGGTGCATAG
Protein sequence
MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWESLEAEGASGGIAILWDSRVVAPTEVIKAFSTVRQSLGPRVTSDHWPLVLNSEDLKWGPSPFRFENMWMSHPSFKSSLPEWWNGEGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLRKKEIMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGDMVDALSRMISKGVEGGIIEEFKVGREGVSLSHLQFADDTIFFCSGKEESFLILNHMLGFFELMSGLKINRSKSQVIGLNCDDAKVDRWASLVGCDVGAFPVSYLGLPLGHNPRSLSFWSPVEDKVRRRLASWKRSFFSKGGRLTLIRSVLSGIPTYFFSLFRAPQKVCRSLEKFMRDFLWKGGEIIVSKYGPHPNEWLMGGGCGGGIFVVGALVLQAGSLVAPFSVGYAPFSLKVNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHPPFRERARFLWFGGMCALLWNLWGERNNRVFRGRERDPEDVWSLTRYHSVTRKSRVGCECGADAEITCECAGMARKPCGGA
Homology
BLAST of Lcy07g002520 vs. ExPASy TrEMBL
Match:
A0A438BQB2 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_783 PE=4 SV=1)
HSP 1 Score: 288.9 bits (738), Expect = 5.1e-74
Identity = 196/722 (27.15%), Postives = 290/722 (40.17%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M ++SWNVRG+G R KRR+VK+ + E+P++V++ ETK+ + +R++V S+W R DW +
Sbjct: 747 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 806
Query: 61 LEAEGASGGIAILWDSRVVAPTE-VIKAFS-TVRQSL------------GP--------- 120
L A GASGGI I+WDS+ + E VI +FS +V+ SL GP
Sbjct: 807 LPASGASGGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDF 866
Query: 121 ---------------RVTSDHWPLVLNSEDLKWGPSPFRFENMWMSHPSFKSSLPEWWNG 180
R TSDHWP+V+++ WGP+PFRFENMW+ H +FK + +WW+G
Sbjct: 867 WVELFDIYGLQEALIRRTSDHWPIVMDTNPFMWGPTPFRFENMWLQHTNFKENFRDWWSG 926
Query: 181 -EGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLRKKEIMGRIKVIDDMEEEGRAEEG 240
+GNG WEG++FM RL+ +K +LK+ N+ FG+ + +KK I+ + D +E+EG
Sbjct: 927 FQGNG-WEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPD 986
Query: 241 MKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD------------------------ 300
+ + + K EL E++L+E W+QK K+KW KEGD
Sbjct: 987 LLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELEN 1046
Query: 301 ------------------------------------------------------------ 360
Sbjct: 1047 ERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEIS 1106
Query: 361 ------------------------------------------------------------ 420
Sbjct: 1107 KAIFQLDRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPK 1166
BLAST of Lcy07g002520 vs. ExPASy TrEMBL
Match:
A0A438EBM8 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_80 PE=4 SV=1)
HSP 1 Score: 274.2 bits (700), Expect = 1.3e-69
Identity = 193/763 (25.29%), Postives = 288/763 (37.75%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M ++SWNVRG+G R KRR+VK+ + E+P++V++ ETK+ + +R++V S+W R DW +
Sbjct: 327 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 386
Query: 61 LEAEGASGGIAILWDSRVVAPTEVIKA--------------------------------- 120
L A GASGGI I+WDS+ + EV+
Sbjct: 387 LPASGASGGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDF 446
Query: 121 --------------------FSTVRQS-------------------------LGP----- 180
F+ +R+S L P
Sbjct: 447 WVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECELLDPPLRNA 506
Query: 181 --------------------------------------RVTSDHWPLVLNSEDLKWGPSP 240
R TSDHWP+V+++ WGP+P
Sbjct: 507 SFTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTP 566
Query: 241 FRFENMWMSHPSFKSSLPEWWNG-EGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLR 300
FRFENMW+ H +FK + +WW+G +GNG WEG++FM RL+ +K +LK+ N+ FG+ + +
Sbjct: 567 FRFENMWLQHTNFKENFRDWWSGFQGNG-WEGHKFMRRLQYVKAKLKEWNKFSFGELKEK 626
Query: 301 KKEIMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD- 360
KK I+ + D +E+EG + + + K EL E++L+E W+QK K+KW KEGD
Sbjct: 627 KKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDC 686
Query: 361 ------------------------------------------------------------ 420
Sbjct: 687 NSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGL 746
BLAST of Lcy07g002520 vs. ExPASy TrEMBL
Match:
A0A438HT14 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_544 PE=4 SV=1)
HSP 1 Score: 271.6 bits (693), Expect = 8.4e-69
Identity = 172/657 (26.18%), Postives = 263/657 (40.03%), Query Frame = 0
Query: 2 IVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWESL 61
++ S +++G G R KRR++K+ + E+P++V++ ETK+ + +R++V S+W R DW +L
Sbjct: 797 VLCSLDIKGFGSRNKRRMIKDFLRSENPDVVMIQETKKENSDRRFVGSVWTVRNKDWVAL 856
Query: 62 EAEGASGGIAILWDSRVVAPTEVIKAFSTVRQSLGPRVTSDHWPLVLNSEDLKWGPSPFR 121
A GASG Q R TSDHWP+V+++ WGP+PFR
Sbjct: 857 PASGASG-----------------------LQEALIRRTSDHWPIVMDTNPFMWGPTPFR 916
Query: 122 FENMWMSHPSFKSSLPEWWNGEGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLRKKE 181
FENMW+ H +FK + +WW+G WEG++FM RL+ +K +LK+ N+ FG+ + +KK
Sbjct: 917 FENMWLQHTNFKENFRDWWSGFQGIGWEGHKFMRRLQYVKAKLKEWNKSSFGELKEKKKS 976
Query: 182 IMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD---- 241
I+ + D +E+EG + + ++ K EL E++L+E W+QK K+KW KEGD
Sbjct: 977 ILNDLANFDAIEQEGGLNPDLISQRVSRKGELEELILREEIHWRQKAKVKWVKEGDCNSK 1036
Query: 242 ------------------------------------------------------------ 301
Sbjct: 1037 FYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDWS 1096
Query: 302 ------------------------------------------------------------ 361
Sbjct: 1097 PISEESALRLESPFTEEEISKAIFQLDRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEF 1156
Query: 362 ------------------------------------------------------------ 420
Sbjct: 1157 HRSGIINQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGVLHETIH 1216
BLAST of Lcy07g002520 vs. ExPASy TrEMBL
Match:
A0A438IBZ1 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_158 PE=4 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 3.5e-67
Identity = 193/786 (24.55%), Postives = 289/786 (36.77%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M ++SWNVRG+G R KRR+VK+ + E+P++V++ ETK+ + +R++V S+W R DW +
Sbjct: 397 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 456
Query: 61 LEAEGASGGIAILWDSRVVAPTEVIKA--------------------------------- 120
L A GASGGI I+WDS+ ++ EV+
Sbjct: 457 LPASGASGGILIIWDSKNLSREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDF 516
Query: 121 --------------------FSTVRQS-------------------------LGP----- 180
F+ +R+S L P
Sbjct: 517 WVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECELLDPPLRNA 576
Query: 181 --------------------------------------RVTSDHWPLVLNSEDLKWGPSP 240
R TSDHWP+V+++ WGP+P
Sbjct: 577 SFTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTP 636
Query: 241 FRFENMWMSHPSFKSSLPEWWNG-EGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLR 300
FRFENMW+ H +FK + +WW+G +GNG WEG++FM RL+ +K +LK+ N+ FG+ + +
Sbjct: 637 FRFENMWLQHTNFKENFRDWWSGFQGNG-WEGHKFMRRLQYVKAKLKEWNKFSFGELKEK 696
Query: 301 KKEIMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD- 360
KK I+ + D +E+EG + + + K EL E++L+E W+QK K+KW KEGD
Sbjct: 697 KKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDC 756
Query: 361 ------------------------------------------------------------ 420
Sbjct: 757 NSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGL 816
BLAST of Lcy07g002520 vs. ExPASy TrEMBL
Match:
A0A438EGK9 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_792 PE=4 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 1.8e-66
Identity = 230/908 (25.33%), Postives = 335/908 (36.89%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M +LSWN RG+G + KRR+V+ +S ++P+IV+L ETKR + +R++V+S+W + V+W +
Sbjct: 1 MKILSWNTRGLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWKGKRVEWAA 60
Query: 61 LEAEGASGGIAILWDS-------------------------------------------- 120
L A GASGGI ILWDS
Sbjct: 61 LPACGASGGIVILWDSMYGPINPLWRKDFWLELQDLYGLTFPRWESGLLDPPLRNAAFTW 120
Query: 121 -------------RVVAPTEVIKAFSTVRQSLGPRVTSDHWPLVLNSEDLKWGPSPFRFE 180
R + E FS Q PR TSDH P+ L + LKWGP+PFRFE
Sbjct: 121 SNMQADPICKRLDRFLFSFEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFE 180
Query: 181 NMWMSHPSFKSSLPEWW---NGEGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLRKK 240
NMW+ HP FK WW GEG WEG++FM +L+ +K +LK+ N FGD + RKK
Sbjct: 181 NMWLLHPEFKEKFRVWWQECTGEG---WEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKK 240
Query: 241 EIMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD--- 300
I+ + ID +E+EG + E + EL +V+LKE W+QK ++KW KEGD
Sbjct: 241 LILTDLSRIDLIEQEGNLNSDLVLERTLRRRELEDVLLKEEVQWRQKSRVKWIKEGDCNS 300
Query: 301 ------------------------------------------------------------ 360
Sbjct: 301 KFFHRVATGESWRVEGIDWVPISGESGVWLDRPFTEEEDLMRVFLEFHTNGVINQSTNAT 360
Query: 361 ---------------------MVDALSRMISK---------------GVEGGIIE----- 420
+V +L ++I+K G +G IE
Sbjct: 361 FIALVPKKSQSFKISDYRPISLVTSLYKIIAKVLSRRLRKVLHETISGSQGAFIEGRHIL 420
Query: 421 ---------------------EFKVG------------------------REGVSLSHLQ 480
FK+ R+G LS
Sbjct: 421 DAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHGWVKASRGLRQGDPLSPFL 480
Query: 481 FA------DDTIFFCSGKEESFLILNHMLGFFELMSGLKINRSKSQVIGLNCDDAKVDRW 540
F +DTIFF E L +L F +SGLKIN KS +
Sbjct: 481 FTLVADVLNDTIFFSKASMEHLQNLKIILLVFGQVSGLKINLEKSTI------------- 540
Query: 541 ASLVGCDVGAFPVSYLGLPLGHNPRSLSFWSPVEDKVRRRLASWKRSFFSKGGRLTLIRS 592
GLPLG NP+++ FW PV +++ RRL WK+++ S GGR+TLI+S
Sbjct: 541 ---------------SGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQS 600
BLAST of Lcy07g002520 vs. NCBI nr
Match:
RVW13148.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 288.9 bits (738), Expect = 1.1e-73
Identity = 196/722 (27.15%), Postives = 290/722 (40.17%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M ++SWNVRG+G R KRR+VK+ + E+P++V++ ETK+ + +R++V S+W R DW +
Sbjct: 747 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 806
Query: 61 LEAEGASGGIAILWDSRVVAPTE-VIKAFS-TVRQSL------------GP--------- 120
L A GASGGI I+WDS+ + E VI +FS +V+ SL GP
Sbjct: 807 LPASGASGGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDF 866
Query: 121 ---------------RVTSDHWPLVLNSEDLKWGPSPFRFENMWMSHPSFKSSLPEWWNG 180
R TSDHWP+V+++ WGP+PFRFENMW+ H +FK + +WW+G
Sbjct: 867 WVELFDIYGLQEALIRRTSDHWPIVMDTNPFMWGPTPFRFENMWLQHTNFKENFRDWWSG 926
Query: 181 -EGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLRKKEIMGRIKVIDDMEEEGRAEEG 240
+GNG WEG++FM RL+ +K +LK+ N+ FG+ + +KK I+ + D +E+EG
Sbjct: 927 FQGNG-WEGHKFMRRLQYVKAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPD 986
Query: 241 MKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD------------------------ 300
+ + + K EL E++L+E W+QK K+KW KEGD
Sbjct: 987 LLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELEN 1046
Query: 301 ------------------------------------------------------------ 360
Sbjct: 1047 ERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEIS 1106
Query: 361 ------------------------------------------------------------ 420
Sbjct: 1107 KAIFQLDRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPK 1166
BLAST of Lcy07g002520 vs. NCBI nr
Match:
RVW45068.1 (putative ribonuclease H protein [Vitis vinifera])
HSP 1 Score: 274.2 bits (700), Expect = 2.7e-69
Identity = 193/763 (25.29%), Postives = 288/763 (37.75%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M ++SWNVRG+G R KRR+VK+ + E+P++V++ ETK+ + +R++V S+W R DW +
Sbjct: 327 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 386
Query: 61 LEAEGASGGIAILWDSRVVAPTEVIKA--------------------------------- 120
L A GASGGI I+WDS+ + EV+
Sbjct: 387 LPASGASGGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDF 446
Query: 121 --------------------FSTVRQS-------------------------LGP----- 180
F+ +R+S L P
Sbjct: 447 WVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECELLDPPLRNA 506
Query: 181 --------------------------------------RVTSDHWPLVLNSEDLKWGPSP 240
R TSDHWP+V+++ WGP+P
Sbjct: 507 SFTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTP 566
Query: 241 FRFENMWMSHPSFKSSLPEWWNG-EGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLR 300
FRFENMW+ H +FK + +WW+G +GNG WEG++FM RL+ +K +LK+ N+ FG+ + +
Sbjct: 567 FRFENMWLQHTNFKENFRDWWSGFQGNG-WEGHKFMRRLQYVKAKLKEWNKFSFGELKEK 626
Query: 301 KKEIMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD- 360
KK I+ + D +E+EG + + + K EL E++L+E W+QK K+KW KEGD
Sbjct: 627 KKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDC 686
Query: 361 ------------------------------------------------------------ 420
Sbjct: 687 NSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGL 746
BLAST of Lcy07g002520 vs. NCBI nr
Match:
RVW87607.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 271.6 bits (693), Expect = 1.7e-68
Identity = 172/657 (26.18%), Postives = 263/657 (40.03%), Query Frame = 0
Query: 2 IVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWESL 61
++ S +++G G R KRR++K+ + E+P++V++ ETK+ + +R++V S+W R DW +L
Sbjct: 797 VLCSLDIKGFGSRNKRRMIKDFLRSENPDVVMIQETKKENSDRRFVGSVWTVRNKDWVAL 856
Query: 62 EAEGASGGIAILWDSRVVAPTEVIKAFSTVRQSLGPRVTSDHWPLVLNSEDLKWGPSPFR 121
A GASG Q R TSDHWP+V+++ WGP+PFR
Sbjct: 857 PASGASG-----------------------LQEALIRRTSDHWPIVMDTNPFMWGPTPFR 916
Query: 122 FENMWMSHPSFKSSLPEWWNGEGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLRKKE 181
FENMW+ H +FK + +WW+G WEG++FM RL+ +K +LK+ N+ FG+ + +KK
Sbjct: 917 FENMWLQHTNFKENFRDWWSGFQGIGWEGHKFMRRLQYVKAKLKEWNKSSFGELKEKKKS 976
Query: 182 IMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD---- 241
I+ + D +E+EG + + ++ K EL E++L+E W+QK K+KW KEGD
Sbjct: 977 ILNDLANFDAIEQEGGLNPDLISQRVSRKGELEELILREEIHWRQKAKVKWVKEGDCNSK 1036
Query: 242 ------------------------------------------------------------ 301
Sbjct: 1037 FYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGLDWS 1096
Query: 302 ------------------------------------------------------------ 361
Sbjct: 1097 PISEESALRLESPFTEEEISKAIFQLDRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEF 1156
Query: 362 ------------------------------------------------------------ 420
Sbjct: 1157 HRSGIINQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGVLHETIH 1216
BLAST of Lcy07g002520 vs. NCBI nr
Match:
RVW94236.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 266.2 bits (679), Expect = 7.3e-67
Identity = 193/786 (24.55%), Postives = 289/786 (36.77%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M ++SWNVRG+G R KRR+VK+ + E+P++V++ ETK+ + +R++V S+W R DW +
Sbjct: 397 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRNKDWVA 456
Query: 61 LEAEGASGGIAILWDSRVVAPTEVIKA--------------------------------- 120
L A GASGGI I+WDS+ ++ EV+
Sbjct: 457 LPASGASGGILIIWDSKNLSREEVVIGSFSVSVKFSLDGCGPLWISAVYGPNSPSLRKDF 516
Query: 121 --------------------FSTVRQS-------------------------LGP----- 180
F+ +R+S L P
Sbjct: 517 WVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECELLDPPLRNA 576
Query: 181 --------------------------------------RVTSDHWPLVLNSEDLKWGPSP 240
R TSDHWP+V+++ WGP+P
Sbjct: 577 SFTWSNMQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRTSDHWPIVMDTNPFMWGPTP 636
Query: 241 FRFENMWMSHPSFKSSLPEWWNG-EGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLR 300
FRFENMW+ H +FK + +WW+G +GNG WEG++FM RL+ +K +LK+ N+ FG+ + +
Sbjct: 637 FRFENMWLQHTNFKENFRDWWSGFQGNG-WEGHKFMRRLQYVKAKLKEWNKFSFGELKEK 696
Query: 301 KKEIMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD- 360
KK I+ + D +E+EG + + + K EL E++L+E W+QK K+KW KEGD
Sbjct: 697 KKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILREEIHWRQKAKVKWVKEGDC 756
Query: 361 ------------------------------------------------------------ 420
Sbjct: 757 NSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHYFEKLYTNPTGESWGVEGL 816
BLAST of Lcy07g002520 vs. NCBI nr
Match:
RVW46854.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 263.8 bits (673), Expect = 3.6e-66
Identity = 230/908 (25.33%), Postives = 335/908 (36.89%), Query Frame = 0
Query: 1 MIVLSWNVRGVGGRFKRRLVKETISQESPNIVILVETKRGSVNRQWVNSLWGNRYVDWES 60
M +LSWN RG+G + KRR+V+ +S ++P+IV+L ETKR + +R++V+S+W + V+W +
Sbjct: 1 MKILSWNTRGLGSKKKRRIVRRFLSTQNPDIVMLQETKRETWDRRFVSSVWKGKRVEWAA 60
Query: 61 LEAEGASGGIAILWDS-------------------------------------------- 120
L A GASGGI ILWDS
Sbjct: 61 LPACGASGGIVILWDSMYGPINPLWRKDFWLELQDLYGLTFPRWESGLLDPPLRNAAFTW 120
Query: 121 -------------RVVAPTEVIKAFSTVRQSLGPRVTSDHWPLVLNSEDLKWGPSPFRFE 180
R + E FS Q PR TSDH P+ L + LKWGP+PFRFE
Sbjct: 121 SNMQADPICKRLDRFLFSFEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFE 180
Query: 181 NMWMSHPSFKSSLPEWW---NGEGNGKWEGYRFMGRLRALKKELKKGNQEVFGDFRLRKK 240
NMW+ HP FK WW GEG WEG++FM +L+ +K +LK+ N FGD + RKK
Sbjct: 181 NMWLLHPEFKEKFRVWWQECTGEG---WEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKK 240
Query: 241 EIMGRIKVIDDMEEEGRAEEGMKEESLALKMELAEVVLKETSIWQQKVKIKWAKEGD--- 300
I+ + ID +E+EG + E + EL +V+LKE W+QK ++KW KEGD
Sbjct: 241 LILTDLSRIDLIEQEGNLNSDLVLERTLRRRELEDVLLKEEVQWRQKSRVKWIKEGDCNS 300
Query: 301 ------------------------------------------------------------ 360
Sbjct: 301 KFFHRVATGESWRVEGIDWVPISGESGVWLDRPFTEEEDLMRVFLEFHTNGVINQSTNAT 360
Query: 361 ---------------------MVDALSRMISK---------------GVEGGIIE----- 420
+V +L ++I+K G +G IE
Sbjct: 361 FIALVPKKSQSFKISDYRPISLVTSLYKIIAKVLSRRLRKVLHETISGSQGAFIEGRHIL 420
Query: 421 ---------------------EFKVG------------------------REGVSLSHLQ 480
FK+ R+G LS
Sbjct: 421 DAVLIANEVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHGWVKASRGLRQGDPLSPFL 480
Query: 481 FA------DDTIFFCSGKEESFLILNHMLGFFELMSGLKINRSKSQVIGLNCDDAKVDRW 540
F +DTIFF E L +L F +SGLKIN KS +
Sbjct: 481 FTLVADVLNDTIFFSKASMEHLQNLKIILLVFGQVSGLKINLEKSTI------------- 540
Query: 541 ASLVGCDVGAFPVSYLGLPLGHNPRSLSFWSPVEDKVRRRLASWKRSFFSKGGRLTLIRS 592
GLPLG NP+++ FW PV +++ RRL WK+++ S GGR+TLI+S
Sbjct: 541 ---------------SGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQS 600
BLAST of Lcy07g002520 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 73.6 bits (179), Expect = 6.5e-13
Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 0
Query: 334 GAFPVSYLGLPLGHNPRSLSFWSPVEDKVRRRLASWKRSFFSKGGRLTLIRSVLSGIPTY 393
GA PV YLGLPL + S + P+ +K+R R+ W S GRL LI SV+ + +
Sbjct: 21 GALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNF 80
Query: 394 FFSLFRAPQKVCRSLEKFMRDFLWKGGEIIVSK 427
+ S FR P + ++ FLW G E+ K
Sbjct: 81 WMSAFRLPSACIKEIDSICSSFLWSGPELNTKK 113
BLAST of Lcy07g002520 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 53.5 bits (127), Expect = 6.9e-07
Identity = 42/138 (30.43%), Postives = 63/138 (45.65%), Query Frame = 0
Query: 491 CILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFAD--HREMIEEFLL---HPPF 550
CI C +E ++H+L+ C FAR W L G +AD + + F L +P +
Sbjct: 295 CIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGG-EWADSIYVNLYWVFNLGNGNPQW 354
Query: 551 RERARFL-WFGGMCALLWNLWGERNNRVFRGRERDPEDVWSLTRYHSVTRKSRVGCE--- 610
+ ++ + W LLW LW RN VFRGRE + ++V L R + R+ E
Sbjct: 355 EKASQLVPW------LLWRLWKNRNELVFRGREFNAQEV--LRRAEDDLEEWRIRTEAES 414
Query: 611 CGADAEITCECAGMARKP 620
CG ++ G R P
Sbjct: 415 CGTKPQVNRSSCGRWRPP 423
BLAST of Lcy07g002520 vs. TAIR 10
Match:
AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 43.1 bits (100), Expect = 9.4e-04
Identity = 26/94 (27.66%), Postives = 43/94 (45.74%), Query Frame = 0
Query: 491 CILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHPPFRERAR 550
C+ C + E ++H+L+ C FAR W + + D ++L+ E +
Sbjct: 12 CVRCPDSRETVNHLLFKCCFARLVW-AISPIPAYPEGEWTDSLYANLYWVLNLEV-EIPK 71
Query: 551 FLWFGGMCA-LLWNLWGERNNRVFRGRERDPEDV 584
G + LLW LW RN +F+G+E D +V
Sbjct: 72 LGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEV 103
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A438BQB2 | 5.1e-74 | 27.15 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
A0A438EBM8 | 1.3e-69 | 25.29 | Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_80 PE... | [more] |
A0A438HT14 | 8.4e-69 | 26.18 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
A0A438IBZ1 | 3.5e-67 | 24.55 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... | [more] |
A0A438EGK9 | 1.8e-66 | 25.33 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
Match Name | E-value | Identity | Description | |
RVW13148.1 | 1.1e-73 | 27.15 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
RVW45068.1 | 2.7e-69 | 25.29 | putative ribonuclease H protein [Vitis vinifera] | [more] |
RVW87607.1 | 1.7e-68 | 26.18 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
RVW94236.1 | 7.3e-67 | 24.55 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
RVW46854.1 | 3.6e-66 | 25.33 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
AT3G24255.1 | 6.5e-13 | 36.56 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT4G29090.1 | 6.9e-07 | 30.43 | Ribonuclease H-like superfamily protein | [more] |
AT2G34320.1 | 9.4e-04 | 27.66 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |