Lcy07g002190 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACTCAAAAGGCTCTCATCTCTGCAGACAGGTTCGACTTCTCCCCTTCTCTAGAATTTACATCTCTGATAATCTTTGATGCGTCTGGATTTTTTGCTTTGATCCTAACTAAATTCCTGTGATTCCATAAACTCCAGATTATGCTAATGGCTTTGGAATAGCCATCATCTTTAATCAGCTCCATAAGCCTTGTCCACTTGTCCATAAGACTCCATCTGTCCCTGAAAAAATCAGTAGTTAGGCAAGCATAGTATCAGAAACTTTGCTAATCAGTTTGGATTTATTTTGTTAAAGAATAGGTTTTAAAAGTTGTAGCTAAGCTAGGCTCTTTAGAAATTAAGCTCTAGAATACGAACACAAAGTTGATCTACTAATCCACAATCTAGTAGTGCAATCAAGAGAAATTGAGTCATAATCAAAACACAAGCTAACTAGTTCCACATGTGTATTTCCTTCTTTTCACAACCAGGGGTACAATATCGGTTTAGGTATCACAAACGATGTAAACAAAAAACTTAAATGATTGAAACAAAAATTTAACTAAGATTAAGATGAAAATTAAATAGAAAGAACAAGACAACTATAGGATCGTGGATAGATAATTGAAGCATATAAAATATTCACTCAAAAAACTAAACACCCCTCTTAAAGCTTTTAATCTTCAAGCTTAGGCAAAATGATCTTAGTGATCTTCTTATTCATGAGGAGATGGAGGGCCCATGATGAGGAGATGGAGAACATCATGGGTTCATGATTGATGCTAAAAATTGAGAAAATGGTGCATACGACTTGGTGAAGTTGGTTTGCATGGATTTCTTTATTGAAGTATCCCGTTTCTAAGCATACTCCCAATAATCCTTTTGTGAACATCAAAATGCTCTATTCTTTATAGGGTAATTGTCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTATTTGCTAAATCACTATGGAAATTGAAAAATTGTGACCACAATTTGTGCAACAACTAACTGATAATTTACATGTCCATTTGACTCCTGGTGTGTACTGTTATTTACAGCTCTGCCCAGTCAAACTTTTTTAAAAAATAAACGTAAGATTTTTCTGAACCAAAAAATCAAAGTCAAATGGATTTTCCTCAGTATCAGTTAAAAAGGAAAACAAACTAATTCTATCTTATATTTTCTCGGTCCCAACGATTTTAAACTTTTTCTACATTCTCACTCATCTCTTCACGATTGAACGTTCCAATATTTTCCTACTAATGTCGAGGCCAAGGATTGGGCCATTTGGCCTTCATTTCCTCTAGGCTCTGGTCTCTCATAGTCTTTCTCGCACTAAATCTATGCTGCTTCAGTATGTTCCTCAATTCTCGAGACGGTATAAATTTACCTATATAACGTACTACTTCATCAATGCTTCGCTAAAGAACTTGAAGGTACAAAAGGTAGGCTTTTTCTATAATGTTCTTAATTCTAATTATGCTAATGTTGTTGAGGAAATTCAAGAGGAAAAACTTATCTAATTTGGGTACGATCATTACTGATCATGTTTGCTCCTTATCATCCCATGATAAATTGGAACATTGTCTCCAAGTCTCCACATTGGGTTATCTGCATTAGAGTACGGAGTGTTTTTGTGTATTCCTAGATGATTTTCAACAAAACACACGACTAACGTTGGATTTCTAAGAATTCTCAAAAATATGTTCTCCAGAATACACACATAAAATATTTGAGATTTGATTCACTAATGTTCTTGATGTACGTGCAGGATTTGTTATGTGATTCTTCAACAGTGAAGACATAAATGACGAAGGATAAGAAGGTCAATTCAGAGGAGACATGCAGTTAGAAAAAGCAGTGGGGACCACTTATTTGTTGTGGGACCGAATAATGGCTGGAGAATGTAGGTTTTTGTATGGGATCGTGCGCCTGTGATCAGTGTGTGGAATTTTGTGGACAAGTTTGTCTAGGAGAGCTTGCCCAACGCTCTCGAAAGGTTGGGGTGTTCCTATGTTTTTCTTCTTCTTTTTCATTGTATTTGTTGGTATTTTCCTTAGTTTATGATCAAAACTATCATTGTATATTGCCTCATCAATTAATATATTAGTGTTTGGCTTGGTTGTTCGCTGGTTTGTGTGTGTTTTTTTCCTCTGTTTGCAGGTGATTTGGTATTGAATACCTAAAAAATTGGTATCAGAGCACGTCAACCTGTGGAGAACCAGAAAATGGCGCAAAAACAAATTGAAGAAAGGGTTGATGGTAATGAGAAAGCCATCGCAGTGTTGCAGGAATCAATTTAAAGGATTGAGAAGAGTATGGAGAGAATGACGATGATGATGGCTGACTTAATGGTGAGTAAAGGAAATCCATCTTCTAGCGTAACTGAGGGATCATCCCAGAAGATGAAGGATAAAGAAAATGTAGAAGAATCCGTAGAGAAGGGAGAAAACACAAGGGAAGGATTGATACCTCTAAGAACAAACGACGATAAAAGTAAGTTCAAGCGCCTAGAGATGCCAATATTTTCAAGAGTGAATCTAGATTCATTGTTAATTTCGTGCGGAGCGGTATTTTGAGATCCATCAACTCACCGAATGGGAAAAAATCACGAAGGCCATTATAAGTTTCAATGAATACGTGGTTGGCTGGTATTGTTGGACACACAACCGTAAGAAGATTATGTCATGGGAAGATTTGAAGGCACAAATGTTCAAAAGATTCAGACCATCGCAAGAAGGAAGCCTTTGTGAGCGATTTTTAGCTATCAAATAGGAAGAATTCGTGGCCGAATACATTAAGAAATTTGAGGTCTATTTTGCGTCGTTGCCGGAGCTACCAGAGACAGTTCTTGAAAACACTTTTTTGAACAGCCTGAAACTGGCGGTCAAAGCAGCTGTTGTAAGTCGAATACCTATTGGGCTGGAAGAAATAATGCTGGAAGCCCAACTTATCGAGGATAGGGACCTGGCCATTAAGCTCGTTATAGAGACTATGGGCCAAAGGTCGTATTATTATACATTGAAGCCCAATGCTACAAGCAGGGGAAAAGCTAATCCAAATATGAGCGGGAAAGCGAACCCTAAGCCTGGGGAAACAGTACCAACCAGAGCTTTTAACTTATCGTAA GACTCAAAAGGCTCTCATCTCTGCAGACAGGATTTGTTATGTGATTCTTCAACAGTGAAGACATAAATGACGAAGGATAAGAAGGTCAATTCAGAGGAGACATGCAGTTAGAAAAAGCAGTGGGGACCACTTATTTGTTGTGGGACCGAATAATGGCTGGAGAATGTAGGTTTTTGTATGGGATCGTGCGCCTGTGATCAGTGTGTGGAATTTTGTGGACAAGTTTGTCTAGGAGAGCTTGCCCAACGCTCTCGAAAGGTTGGGGTGTTCCTATGTTTTTCTTCTTCTTTTTCATTGTATTTGTTGGTATTTTCCTTAGTTTATGATCAAAACTATCATTGTATATTGCCTCATCAATTAATATATTAGTGTTTGGCTTGGTTGTTCGCTGGTTTGTGTGTGTTTTTTTCCTCTGTTTGCAGGTGATTTGGTATTGAATACCTAAAAAATTGGTATCAGAGCACGTCAACCTGTGGAGAACCAGAAAATGGCGCAAAAACAAATTGAAGAAAGGGTTGATGGTAATGAGAAAGCCATCGCAGTGTTGCAGGAATCAATTTAAAGGATTGAGAAGAGTATGGAGAGAATGACGATGATGATGGCTGACTTAATGGTGAGTAAAGGAAATCCATCTTCTAGCGTAACTGAGGGATCATCCCAGAAGATGAAGGATAAAGAAAATGTAGAAGAATCCGTAGAGAAGGGAGAAAACACAAGGGAAGGATTGATACCTCTAAGAACAAACGACGATAAAAGTAAGTTCAAGCGCCTAGAGATGCCAATATTTTCAAGAGTGAATCTAGATTCATTGTTAATTTCGTGCGGAGCGGAAGAATTCGTGGCCGAATACATTAAGAAATTTGAGGTCTATTTTGCGTCGTTGCCGGAGCTACCAGAGACAGTTCTTGAAAACACTTTTTTGAACAGCCTGAAACTGGCGGTCAAAGCAGCTGTTGTAAGTCGAATACCTATTGGGCTGGAAGAAATAATGCTGGAAGCCCAACTTATCGAGGATAGGGACCTGGCCATTAAGCTCGTTATAGAGACTATGGGCCAAAGGTCGTATTATTATACATTGAAGCCCAATGCTACAAGCAGGGGAAAAGCTAATCCAAATATGAGCGGGAAAGCGAACCCTAAGCCTGGGGAAACAGTACCAACCAGAGCTTTTAACTTATCGTAA ATGGAGAGAATGACGATGATGATGGCTGACTTAATGGTGAGTAAAGGAAATCCATCTTCTAGCGTAACTGAGGGATCATCCCAGAAGATGAAGGATAAAGAAAATGTAGAAGAATCCGTAGAGAAGGGAGAAAACACAAGGGAAGGATTGATACCTCTAAGAACAAACGACGATAAAAGTAAGTTCAAGCGCCTAGAGATGCCAATATTTTCAAGAGTGAATCTAGATTCATTGTTAATTTCGTGCGGAGCGGAAGAATTCGTGGCCGAATACATTAAGAAATTTGAGGTCTATTTTGCGTCGTTGCCGGAGCTACCAGAGACAGTTCTTGAAAACACTTTTTTGAACAGCCTGAAACTGGCGGTCAAAGCAGCTGTTGTAAGTCGAATACCTATTGGGCTGGAAGAAATAATGCTGGAAGCCCAACTTATCGAGGATAGGGACCTGGCCATTAAGCTCGTTATAGAGACTATGGGCCAAAGGTCGTATTATTATACATTGAAGCCCAATGCTACAAGCAGGGGAAAAGCTAATCCAAATATGAGCGGGAAAGCGAACCCTAAGCCTGGGGAAACAGTACCAACCAGAGCTTTTAACTTATCGTAA MERMTMMMADLMVSKGNPSSSVTEGSSQKMKDKENVEESVEKGENTREGLIPLRTNDDKSKFKRLEMPIFSRVNLDSLLISCGAEEFVAEYIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIMLEAQLIEDRDLAIKLVIETMGQRSYYYTLKPNATSRGKANPNMSGKANPKPGETVPTRAFNLS Homology
BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5D3DFL3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00520 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.7e-10 Identity = 51/122 (41.80%), Postives = 68/122 (55.74%), Query Frame = 0
BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5A7UAV8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00040 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 4.1e-09 Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0
BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5A7UHY0 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00320 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 7.0e-09 Identity = 66/189 (34.92%), Postives = 92/189 (48.68%), Query Frame = 0
BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5D3C259 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001390 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08 Identity = 63/193 (32.64%), Postives = 93/193 (48.19%), Query Frame = 0
BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5D3DGC7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00940 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08 Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 0
BLAST of Lcy07g002190 vs. NCBI nr
Match: KAA0060319.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22069.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.1 bits (183), Expect = 7.7e-10 Identity = 51/122 (41.80%), Postives = 68/122 (55.74%), Query Frame = 0
BLAST of Lcy07g002190 vs. NCBI nr
Match: KAA0050701.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK07735.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 8.5e-09 Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0
BLAST of Lcy07g002190 vs. NCBI nr
Match: XP_038898276.1 (uncharacterized protein LOC120085983 isoform X1 [Benincasa hispida] >XP_038898277.1 uncharacterized protein LOC120085983 isoform X2 [Benincasa hispida]) HSP 1 Score: 71.6 bits (174), Expect = 8.5e-09 Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Lcy07g002190 vs. NCBI nr
Match: KAA0054754.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-08 Identity = 66/189 (34.92%), Postives = 92/189 (48.68%), Query Frame = 0
BLAST of Lcy07g002190 vs. NCBI nr
Match: XP_031737605.1 (uncharacterized protein LOC116402475 [Cucumis sativus]) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-08 Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|