Lcy07g002190 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g002190
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTy3/gypsy retrotransposon protein
LocationChr07: 7928125 .. 7931249 (+)
RNA-Seq ExpressionLcy07g002190
SyntenyLcy07g002190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTCAAAAGGCTCTCATCTCTGCAGACAGGTTCGACTTCTCCCCTTCTCTAGAATTTACATCTCTGATAATCTTTGATGCGTCTGGATTTTTTGCTTTGATCCTAACTAAATTCCTGTGATTCCATAAACTCCAGATTATGCTAATGGCTTTGGAATAGCCATCATCTTTAATCAGCTCCATAAGCCTTGTCCACTTGTCCATAAGACTCCATCTGTCCCTGAAAAAATCAGTAGTTAGGCAAGCATAGTATCAGAAACTTTGCTAATCAGTTTGGATTTATTTTGTTAAAGAATAGGTTTTAAAAGTTGTAGCTAAGCTAGGCTCTTTAGAAATTAAGCTCTAGAATACGAACACAAAGTTGATCTACTAATCCACAATCTAGTAGTGCAATCAAGAGAAATTGAGTCATAATCAAAACACAAGCTAACTAGTTCCACATGTGTATTTCCTTCTTTTCACAACCAGGGGTACAATATCGGTTTAGGTATCACAAACGATGTAAACAAAAAACTTAAATGATTGAAACAAAAATTTAACTAAGATTAAGATGAAAATTAAATAGAAAGAACAAGACAACTATAGGATCGTGGATAGATAATTGAAGCATATAAAATATTCACTCAAAAAACTAAACACCCCTCTTAAAGCTTTTAATCTTCAAGCTTAGGCAAAATGATCTTAGTGATCTTCTTATTCATGAGGAGATGGAGGGCCCATGATGAGGAGATGGAGAACATCATGGGTTCATGATTGATGCTAAAAATTGAGAAAATGGTGCATACGACTTGGTGAAGTTGGTTTGCATGGATTTCTTTATTGAAGTATCCCGTTTCTAAGCATACTCCCAATAATCCTTTTGTGAACATCAAAATGCTCTATTCTTTATAGGGTAATTGTCTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTATTTGCTAAATCACTATGGAAATTGAAAAATTGTGACCACAATTTGTGCAACAACTAACTGATAATTTACATGTCCATTTGACTCCTGGTGTGTACTGTTATTTACAGCTCTGCCCAGTCAAACTTTTTTAAAAAATAAACGTAAGATTTTTCTGAACCAAAAAATCAAAGTCAAATGGATTTTCCTCAGTATCAGTTAAAAAGGAAAACAAACTAATTCTATCTTATATTTTCTCGGTCCCAACGATTTTAAACTTTTTCTACATTCTCACTCATCTCTTCACGATTGAACGTTCCAATATTTTCCTACTAATGTCGAGGCCAAGGATTGGGCCATTTGGCCTTCATTTCCTCTAGGCTCTGGTCTCTCATAGTCTTTCTCGCACTAAATCTATGCTGCTTCAGTATGTTCCTCAATTCTCGAGACGGTATAAATTTACCTATATAACGTACTACTTCATCAATGCTTCGCTAAAGAACTTGAAGGTACAAAAGGTAGGCTTTTTCTATAATGTTCTTAATTCTAATTATGCTAATGTTGTTGAGGAAATTCAAGAGGAAAAACTTATCTAATTTGGGTACGATCATTACTGATCATGTTTGCTCCTTATCATCCCATGATAAATTGGAACATTGTCTCCAAGTCTCCACATTGGGTTATCTGCATTAGAGTACGGAGTGTTTTTGTGTATTCCTAGATGATTTTCAACAAAACACACGACTAACGTTGGATTTCTAAGAATTCTCAAAAATATGTTCTCCAGAATACACACATAAAATATTTGAGATTTGATTCACTAATGTTCTTGATGTACGTGCAGGATTTGTTATGTGATTCTTCAACAGTGAAGACATAAATGACGAAGGATAAGAAGGTCAATTCAGAGGAGACATGCAGTTAGAAAAAGCAGTGGGGACCACTTATTTGTTGTGGGACCGAATAATGGCTGGAGAATGTAGGTTTTTGTATGGGATCGTGCGCCTGTGATCAGTGTGTGGAATTTTGTGGACAAGTTTGTCTAGGAGAGCTTGCCCAACGCTCTCGAAAGGTTGGGGTGTTCCTATGTTTTTCTTCTTCTTTTTCATTGTATTTGTTGGTATTTTCCTTAGTTTATGATCAAAACTATCATTGTATATTGCCTCATCAATTAATATATTAGTGTTTGGCTTGGTTGTTCGCTGGTTTGTGTGTGTTTTTTTCCTCTGTTTGCAGGTGATTTGGTATTGAATACCTAAAAAATTGGTATCAGAGCACGTCAACCTGTGGAGAACCAGAAAATGGCGCAAAAACAAATTGAAGAAAGGGTTGATGGTAATGAGAAAGCCATCGCAGTGTTGCAGGAATCAATTTAAAGGATTGAGAAGAGTATGGAGAGAATGACGATGATGATGGCTGACTTAATGGTGAGTAAAGGAAATCCATCTTCTAGCGTAACTGAGGGATCATCCCAGAAGATGAAGGATAAAGAAAATGTAGAAGAATCCGTAGAGAAGGGAGAAAACACAAGGGAAGGATTGATACCTCTAAGAACAAACGACGATAAAAGTAAGTTCAAGCGCCTAGAGATGCCAATATTTTCAAGAGTGAATCTAGATTCATTGTTAATTTCGTGCGGAGCGGTATTTTGAGATCCATCAACTCACCGAATGGGAAAAAATCACGAAGGCCATTATAAGTTTCAATGAATACGTGGTTGGCTGGTATTGTTGGACACACAACCGTAAGAAGATTATGTCATGGGAAGATTTGAAGGCACAAATGTTCAAAAGATTCAGACCATCGCAAGAAGGAAGCCTTTGTGAGCGATTTTTAGCTATCAAATAGGAAGAATTCGTGGCCGAATACATTAAGAAATTTGAGGTCTATTTTGCGTCGTTGCCGGAGCTACCAGAGACAGTTCTTGAAAACACTTTTTTGAACAGCCTGAAACTGGCGGTCAAAGCAGCTGTTGTAAGTCGAATACCTATTGGGCTGGAAGAAATAATGCTGGAAGCCCAACTTATCGAGGATAGGGACCTGGCCATTAAGCTCGTTATAGAGACTATGGGCCAAAGGTCGTATTATTATACATTGAAGCCCAATGCTACAAGCAGGGGAAAAGCTAATCCAAATATGAGCGGGAAAGCGAACCCTAAGCCTGGGGAAACAGTACCAACCAGAGCTTTTAACTTATCGTAA

mRNA sequence

GACTCAAAAGGCTCTCATCTCTGCAGACAGGATTTGTTATGTGATTCTTCAACAGTGAAGACATAAATGACGAAGGATAAGAAGGTCAATTCAGAGGAGACATGCAGTTAGAAAAAGCAGTGGGGACCACTTATTTGTTGTGGGACCGAATAATGGCTGGAGAATGTAGGTTTTTGTATGGGATCGTGCGCCTGTGATCAGTGTGTGGAATTTTGTGGACAAGTTTGTCTAGGAGAGCTTGCCCAACGCTCTCGAAAGGTTGGGGTGTTCCTATGTTTTTCTTCTTCTTTTTCATTGTATTTGTTGGTATTTTCCTTAGTTTATGATCAAAACTATCATTGTATATTGCCTCATCAATTAATATATTAGTGTTTGGCTTGGTTGTTCGCTGGTTTGTGTGTGTTTTTTTCCTCTGTTTGCAGGTGATTTGGTATTGAATACCTAAAAAATTGGTATCAGAGCACGTCAACCTGTGGAGAACCAGAAAATGGCGCAAAAACAAATTGAAGAAAGGGTTGATGGTAATGAGAAAGCCATCGCAGTGTTGCAGGAATCAATTTAAAGGATTGAGAAGAGTATGGAGAGAATGACGATGATGATGGCTGACTTAATGGTGAGTAAAGGAAATCCATCTTCTAGCGTAACTGAGGGATCATCCCAGAAGATGAAGGATAAAGAAAATGTAGAAGAATCCGTAGAGAAGGGAGAAAACACAAGGGAAGGATTGATACCTCTAAGAACAAACGACGATAAAAGTAAGTTCAAGCGCCTAGAGATGCCAATATTTTCAAGAGTGAATCTAGATTCATTGTTAATTTCGTGCGGAGCGGAAGAATTCGTGGCCGAATACATTAAGAAATTTGAGGTCTATTTTGCGTCGTTGCCGGAGCTACCAGAGACAGTTCTTGAAAACACTTTTTTGAACAGCCTGAAACTGGCGGTCAAAGCAGCTGTTGTAAGTCGAATACCTATTGGGCTGGAAGAAATAATGCTGGAAGCCCAACTTATCGAGGATAGGGACCTGGCCATTAAGCTCGTTATAGAGACTATGGGCCAAAGGTCGTATTATTATACATTGAAGCCCAATGCTACAAGCAGGGGAAAAGCTAATCCAAATATGAGCGGGAAAGCGAACCCTAAGCCTGGGGAAACAGTACCAACCAGAGCTTTTAACTTATCGTAA

Coding sequence (CDS)

ATGGAGAGAATGACGATGATGATGGCTGACTTAATGGTGAGTAAAGGAAATCCATCTTCTAGCGTAACTGAGGGATCATCCCAGAAGATGAAGGATAAAGAAAATGTAGAAGAATCCGTAGAGAAGGGAGAAAACACAAGGGAAGGATTGATACCTCTAAGAACAAACGACGATAAAAGTAAGTTCAAGCGCCTAGAGATGCCAATATTTTCAAGAGTGAATCTAGATTCATTGTTAATTTCGTGCGGAGCGGAAGAATTCGTGGCCGAATACATTAAGAAATTTGAGGTCTATTTTGCGTCGTTGCCGGAGCTACCAGAGACAGTTCTTGAAAACACTTTTTTGAACAGCCTGAAACTGGCGGTCAAAGCAGCTGTTGTAAGTCGAATACCTATTGGGCTGGAAGAAATAATGCTGGAAGCCCAACTTATCGAGGATAGGGACCTGGCCATTAAGCTCGTTATAGAGACTATGGGCCAAAGGTCGTATTATTATACATTGAAGCCCAATGCTACAAGCAGGGGAAAAGCTAATCCAAATATGAGCGGGAAAGCGAACCCTAAGCCTGGGGAAACAGTACCAACCAGAGCTTTTAACTTATCGTAA

Protein sequence

MERMTMMMADLMVSKGNPSSSVTEGSSQKMKDKENVEESVEKGENTREGLIPLRTNDDKSKFKRLEMPIFSRVNLDSLLISCGAEEFVAEYIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIMLEAQLIEDRDLAIKLVIETMGQRSYYYTLKPNATSRGKANPNMSGKANPKPGETVPTRAFNLS
Homology
BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5D3DFL3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00520 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.7e-10
Identity = 51/122 (41.80%), Postives = 68/122 (55.74%), Query Frame = 0

Query: 58  DKSKFKRLEMPIFSRVNLDSLLISCGAEEFVA--------------------EYIKKFEV 117
           D+SK+K+LEMP+F   N +S +    AE F                      EY+KKF  
Sbjct: 13  DRSKYKKLEMPMFLGKNPESWVYR--AEHFFEINNLLEAEKVKVVVQDGSYNEYVKKFVN 72

Query: 118 YFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIMLEAQLIEDRDLAIKLVIET 160
           Y A LP + E+VL +TFL  L+ A+KA VV R P  LE+ M EAQL+ DR+LA+KL    
Sbjct: 73  YSAPLPYIAESVLRDTFLIGLEPALKAEVVGRHPQTLEDCMKEAQLVNDRNLALKLARAE 132

BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5A7UAV8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00040 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.1e-09
Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0

Query: 58  DKSKFKRLEMPIFSRVN---------------------------------------LDSL 117
           D+SK+K+LE+PIF+RVN                                       L + 
Sbjct: 11  DRSKYKKLEIPIFTRVNPESWVYRVQHYFDVNELVDEEKISRGGCLNTSRLPGEGSLGAR 70

Query: 118 LISCGAEEFVAEYIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIM 162
           LI    +    +Y+KKF  Y ASLPE+ ++VL + F+  L+  ++A V SR P  LE+ M
Sbjct: 71  LIWIKQDGSYDDYLKKFLDYSASLPEMAKSVLIDAFVTGLETTLQAEVKSRHPTTLEDCM 130

BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5A7UHY0 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00320 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 7.0e-09
Identity = 66/189 (34.92%), Postives = 92/189 (48.68%), Query Frame = 0

Query: 1   MERMTMMMADLMVSKGNPSSSVTEGSSQKMKDK-ENVEESVEKGENTREGLIPLRTNDDK 60
           MER+   M D    K    S   +GS  K+K K E ++  VE   NT+  L+      D+
Sbjct: 31  MERLAEEMRDSHSYKKKEESGTFDGSVMKLKGKMEEMDVMVE--VNTQ--LV------DQ 90

Query: 61  SKFKRLEMPIFSRVN-----------------------------LDSLLISCGAEEFVAE 120
           SK+K+LE+P+F   N                             L + LI    +    E
Sbjct: 91  SKYKKLEVPMFLGENPESWVYRAEHFFQINNLLEAKKVKVAVKSLGARLIRIQQDGSYNE 150

Query: 121 YIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIMLEAQLIEDRDLA 160
           Y+KKF  Y A LP + E+VL + FL  L+ A++A VVSR P  LE+ M EAQL+ DR+LA
Sbjct: 151 YVKKFVNYSAPLPYMAESVLRDAFLTGLESALQAEVVSRHPQTLEDCMKEAQLVNDRNLA 209

BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5D3C259 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001390 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 63/193 (32.64%), Postives = 93/193 (48.19%), Query Frame = 0

Query: 1   MERMTMMMADLMVSKGNPSSSVTEGSSQKMKDKENVEESVEKGENTREGLIPLRT-NDDK 60
           M+R+   + D    K    S  ++GS  KMK K  +EE+   GE        + T   D+
Sbjct: 31  MDRLADELRDQSYKK-KEESGTSDGSIMKMKGK--MEETDVTGE--------IHTLQIDR 90

Query: 61  SKFKRLEMPIF---------------------------------SRVNLDSLLISCGAEE 120
           SK+K+LEMP+F                                  + +L + LI    E 
Sbjct: 91  SKYKKLEMPMFLGENPESWVYRENIFLRSTTYQKQKRSRWLWDTGQKSLGARLIRIQQEG 150

Query: 121 FVAEYIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIMLEAQLIED 160
             ++Y+KKF  Y A LP + E+VL + FL  L+ A++A V+SR P  LE+ M+ AQL+ D
Sbjct: 151 SYSDYVKKFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVND 210

BLAST of Lcy07g002190 vs. ExPASy TrEMBL
Match: A0A5D3DGC7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00940 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 0

Query: 59  KSKFKRLEMPIFSRVNLDSLLISCGAEEFVAEYIKKFEVYFASLPELPETVLENTFLNSL 118
           K  F+  + P     +L + LI    +   A+Y+KKF  Y A LPE+ E+VL + F+  L
Sbjct: 150 KRMFEHFKAP--GEGSLGARLIRIRQDGLYADYLKKFLEYSAPLPEMAESVLIDAFITGL 209

Query: 119 KLAVKAAVVSRIPIGLEEIMLEAQLIEDRDLAIKLVIETMGQR 162
           ++ ++A V+SR P+ LE+ M EAQ++ DRD AIKL +     R
Sbjct: 210 EINLQAEVISRHPMTLEDCMREAQMVSDRDYAIKLALNDWRSR 250

BLAST of Lcy07g002190 vs. NCBI nr
Match: KAA0060319.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22069.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 7.7e-10
Identity = 51/122 (41.80%), Postives = 68/122 (55.74%), Query Frame = 0

Query: 58  DKSKFKRLEMPIFSRVNLDSLLISCGAEEFVA--------------------EYIKKFEV 117
           D+SK+K+LEMP+F   N +S +    AE F                      EY+KKF  
Sbjct: 13  DRSKYKKLEMPMFLGKNPESWVYR--AEHFFEINNLLEAEKVKVVVQDGSYNEYVKKFVN 72

Query: 118 YFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIMLEAQLIEDRDLAIKLVIET 160
           Y A LP + E+VL +TFL  L+ A+KA VV R P  LE+ M EAQL+ DR+LA+KL    
Sbjct: 73  YSAPLPYIAESVLRDTFLIGLEPALKAEVVGRHPQTLEDCMKEAQLVNDRNLALKLARAE 132

BLAST of Lcy07g002190 vs. NCBI nr
Match: KAA0050701.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK07735.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 8.5e-09
Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0

Query: 58  DKSKFKRLEMPIFSRVN---------------------------------------LDSL 117
           D+SK+K+LE+PIF+RVN                                       L + 
Sbjct: 11  DRSKYKKLEIPIFTRVNPESWVYRVQHYFDVNELVDEEKISRGGCLNTSRLPGEGSLGAR 70

Query: 118 LISCGAEEFVAEYIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIM 162
           LI    +    +Y+KKF  Y ASLPE+ ++VL + F+  L+  ++A V SR P  LE+ M
Sbjct: 71  LIWIKQDGSYDDYLKKFLDYSASLPEMAKSVLIDAFVTGLETTLQAEVKSRHPTTLEDCM 130

BLAST of Lcy07g002190 vs. NCBI nr
Match: XP_038898276.1 (uncharacterized protein LOC120085983 isoform X1 [Benincasa hispida] >XP_038898277.1 uncharacterized protein LOC120085983 isoform X2 [Benincasa hispida])

HSP 1 Score: 71.6 bits (174), Expect = 8.5e-09
Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 0

Query: 74  NLDSLLISCGAEEFVAEYIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIG 133
           +L + L+    E   AEY+KKF  Y   LP+L E VL + F+N L+  ++A V+SR P  
Sbjct: 12  SLGARLLRIRQEGTYAEYVKKFVTYSTPLPDLAEEVLRDAFVNGLEPTLRAEVISRKPTT 71

Query: 134 LEEIMLEAQLIEDRDLAIKLVIETMG 160
           LEE M EAQL+ DR++A+K+ +  +G
Sbjct: 72  LEECMYEAQLVSDRNVALKIALADLG 97

BLAST of Lcy07g002190 vs. NCBI nr
Match: KAA0054754.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-08
Identity = 66/189 (34.92%), Postives = 92/189 (48.68%), Query Frame = 0

Query: 1   MERMTMMMADLMVSKGNPSSSVTEGSSQKMKDK-ENVEESVEKGENTREGLIPLRTNDDK 60
           MER+   M D    K    S   +GS  K+K K E ++  VE   NT+  L+      D+
Sbjct: 31  MERLAEEMRDSHSYKKKEESGTFDGSVMKLKGKMEEMDVMVE--VNTQ--LV------DQ 90

Query: 61  SKFKRLEMPIFSRVN-----------------------------LDSLLISCGAEEFVAE 120
           SK+K+LE+P+F   N                             L + LI    +    E
Sbjct: 91  SKYKKLEVPMFLGENPESWVYRAEHFFQINNLLEAKKVKVAVKSLGARLIRIQQDGSYNE 150

Query: 121 YIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIGLEEIMLEAQLIEDRDLA 160
           Y+KKF  Y A LP + E+VL + FL  L+ A++A VVSR P  LE+ M EAQL+ DR+LA
Sbjct: 151 YVKKFVNYSAPLPYMAESVLRDAFLTGLESALQAEVVSRHPQTLEDCMKEAQLVNDRNLA 209

BLAST of Lcy07g002190 vs. NCBI nr
Match: XP_031737605.1 (uncharacterized protein LOC116402475 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-08
Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = 0

Query: 74  NLDSLLISCGAEEFVAEYIKKFEVYFASLPELPETVLENTFLNSLKLAVKAAVVSRIPIG 133
           +L + LI    E   ++Y+KKF +Y A LP++ +++L + FL  L+ A++A V+SR P  
Sbjct: 160 SLGARLIRIRQEGSYSDYVKKFVIYSAPLPDMAKSILLDAFLTGLEPALQAEVISRHPQT 219

Query: 134 LEEIMLEAQLIEDRDLAIKLVIETM 159
           LEE M EAQL+ DR++A+KL +E M
Sbjct: 220 LEECMKEAQLVNDRNIALKLAMEEM 244

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFL33.7e-1041.80Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UAV84.1e-0934.27Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UHY07.0e-0934.92Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3C2591.2e-0832.64Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DGC72.1e-0838.83Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0060319.17.7e-1041.80retrotransposon protein [Cucumis melo var. makuwa] >TYK22069.1 retrotransposon p... [more]
KAA0050701.18.5e-0934.27retrotransposon protein [Cucumis melo var. makuwa] >TYK07735.1 retrotransposon p... [more]
XP_038898276.18.5e-0943.02uncharacterized protein LOC120085983 isoform X1 [Benincasa hispida] >XP_03889827... [more]
KAA0054754.11.5e-0834.92Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
XP_031737605.11.9e-0843.53uncharacterized protein LOC116402475 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..52

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g002190.1Lcy07g002190.1mRNA