Lcy07g001680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g001680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	VQ domain-containing protein
Location	Chr07: 4217137 .. 4218368 (+)
RNA-Seq Expression	Lcy07g001680
Synteny	Lcy07g001680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCCTTTGCATTTAAGAAGTCAACAAATAGAAAGTCAAACAAACAATACTTTTGTCACAAAACTAAAACACCCAAAAAAAATAAAAATAAAACAAAAAAAAATGTTATTATTTAATTCCCCCAACCATATTTCTCAACTCTCCTCCAATTATTACAAACAAAAACAACCCCTAATTTAACCCAAATTCCCGATTCTCCCCCTTTCCCCTTTTCCCCGATCCCAAATCTCCGATCATATTCCGATCCTCCTCCGCCAGATCCGCCATGAACCCGCCGGTCTCCTCCGCCGGCGGAAGCCCCAGCACCCCCAGAAAGAAGGAGATCCAGCTGCAGGGCCCCCGCCCGCCGCAGCTCCGCGTCAGCCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCACCGGTCGGCCGCCCTCCTCTCCCGCCGGGCGCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTGGCGGAGAACAACTTTATGTCCGTCGTCCAGCGCCTCACCGGCCTGTCGTCCTCCGCCGCCCACGACGGCGACCTGTCCCCGGCGGCGAGACTGGCAACAATCGAGAAGGCGAGCCCCCGATCGGAAAGGGAAAGGGAAAGGGAAATCGACGTGAGCGACATGATGGATTTGACGGAGTTTTCGGTGGATTTAGGGCAAACCCCCGGAATTCTATCTCCGGCTCCGGCGACCCTGGCTCCAATTCCGACGGGATTCTTCTCACCGGCGATTGAGCCTCAGAACTTCTCGTATTCGTTGATTCACGAGCTGAGTCCTCATTGGCCCAGCCCATCGGCTCTGTTCCCGGCTGCTCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTCTAGCTAAGTTCTCTCTCTCTCTCTTCTTTCTCTCTCTAGAATATTAATCTTCATTGCCAATGCCCTTCAAAGAGGAAATTTGGGTTTTTTTTTTTTTTTAACCTTTTTGTAAAGTAGGTAATTGTAATTTGTACAACATTTTCATTTTTGGCAATTCGTTAATTACCCCTCAAAAATATAGTTTTTTTTTTTCCCTTTTTGCCTTTTATGCTATAAATAAATACCATTTGAGACCTAATTGATATTTGTAAATGTATAAGTCATTTTCTTCCCGCCAACAAGAACACAACTCAACTAGCATAAATTTGTACCGATAACCACAA

mRNA sequence

AATTTCCTTTGCATTTAAGAAGTCAACAAATAGAAAGTCAAACAAACAATACTTTTGTCACAAAACTAAAACACCCAAAAAAAATAAAAATAAAACAAAAAAAAATGTTATTATTTAATTCCCCCAACCATATTTCTCAACTCTCCTCCAATTATTACAAACAAAAACAACCCCTAATTTAACCCAAATTCCCGATTCTCCCCCTTTCCCCTTTTCCCCGATCCCAAATCTCCGATCATATTCCGATCCTCCTCCGCCAGATCCGCCATGAACCCGCCGGTCTCCTCCGCCGGCGGAAGCCCCAGCACCCCCAGAAAGAAGGAGATCCAGCTGCAGGGCCCCCGCCCGCCGCAGCTCCGCGTCAGCCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCACCGGTCGGCCGCCCTCCTCTCCCGCCGGGCGCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTGGCGGAGAACAACTTTATGTCCGTCGTCCAGCGCCTCACCGGCCTGTCGTCCTCCGCCGCCCACGACGGCGACCTGTCCCCGGCGGCGAGACTGGCAACAATCGAGAAGGCGAGCCCCCGATCGGAAAGGGAAAGGGAAAGGGAAATCGACGTGAGCGACATGATGGATTTGACGGAGTTTTCGGTGGATTTAGGGCAAACCCCCGGAATTCTATCTCCGGCTCCGGCGACCCTGGCTCCAATTCCGACGGGATTCTTCTCACCGGCGATTGAGCCTCAGAACTTCTCGTATTCGTTGATTCACGAGCTGAGTCCTCATTGGCCCAGCCCATCGGCTCTGTTCCCGGCTGCTCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTCTAGCTAAGTTCTCTCTCTCTCTCTTCTTTCTCTCTCTAGAATATTAATCTTCATTGCCAATGCCCTTCAAAGAGGAAATTTGGGTTTTTTTTTTTTTTTAACCTTTTTGTAAAGTAGGTAATTGTAATTTGTACAACATTTTCATTTTTGGCAATTCGTTAATTACCCCTCAAAAATATAGTTTTTTTTTTTCCCTTTTTGCCTTTTATGCTATAAATAAATACCATTTGAGACCTAATTGATATTTGTAAATGTATAAGTCATTTTCTTCCCGCCAACAAGAACACAACTCAACTAGCATAAATTTGTACCGATAACCACAA

Coding sequence (CDS)

ATGAACCCGCCGGTCTCCTCCGCCGGCGGAAGCCCCAGCACCCCCAGAAAGAAGGAGATCCAGCTGCAGGGCCCCCGCCCGCCGCAGCTCCGCGTCAGCCAAGAATCCCGCAAAATCAAGAAGCCGCCGCCGCACCCTCAGCCGATTCCACCGGTCGGCCGCCCTCCTCTCCCGCCGGGCGCCGCCCAATGGCCTCAGCCCCTCATCATCTACGACATCTCCCCCAAAGTCATCCACGTGGCGGAGAACAACTTTATGTCCGTCGTCCAGCGCCTCACCGGCCTGTCGTCCTCCGCCGCCCACGACGGCGACCTGTCCCCGGCGGCGAGACTGGCAACAATCGAGAAGGCGAGCCCCCGATCGGAAAGGGAAAGGGAAAGGGAAATCGACGTGAGCGACATGATGGATTTGACGGAGTTTTCGGTGGATTTAGGGCAAACCCCCGGAATTCTATCTCCGGCTCCGGCGACCCTGGCTCCAATTCCGACGGGATTCTTCTCACCGGCGATTGAGCCTCAGAACTTCTCGTATTCGTTGATTCACGAGCTGAGTCCTCATTGGCCCAGCCCATCGGCTCTGTTCCCGGCTGCTCTGGTTTCCCCAATTTCTTCACCAAATATCTTCAACAATCTCTTTGACTTCTAG

Protein sequence

MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPGAAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAHDGDLSPAARLATIEKASPRSEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSLIHELSPHWPSPSALFPAALVSPISSPNIFNNLFDF

Homology

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BLAST of Lcy07g001680 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 93/219 (42.47%), Postives = 127/219 (57.99%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPP-- 60
           M+P    AGG+PS    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPY 60

Query: 61  LPPGAAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSS----SAAHDGDLSPAARLA 120
           +P       +P++IY +SPKV+H   + FM+VVQRLTG+SS     +   GD+SPAARLA
Sbjct: 61  IP------REPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLA 120

Query: 121 TIEKASPRSERE---REREIDVSDMM-DLTEFSVDLGQTPGILSPAPATLAPIPTGFFSP 180
           + E ASPR  +E   R+  ++++  M +  EF    G  PGILSP+PA L    TG FSP
Sbjct: 121 STENASPRGGKEPAARDETVEINTAMEEAAEFG---GYAPGILSPSPALLPTASTGIFSP 180

Query: 181 AIEPQNFSYSLIHELSPHWPS-PSALF-PAALVSPISSP 206
                     + H+     P+ P  LF PA  +SP  SP
Sbjct: 181 ----------MYHQGGMFSPAIPLGLFSPAGFMSPFRSP 200

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BLAST of Lcy07g001680 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 63/180 (35.00%), Postives = 83/180 (46.11%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPHPQPIPPVGRPPLPPGAAQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PPHPQP PP      P  +   P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGLSSSA---------------------AHDGDLSPAARLATIEKAS 143
              NNFM++VQRLTG +S++                        G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSERER----EREIDVSDMMDLTE-------FSVDLGQTPGILSPAPATLAPIPTGFFS 168
             +E       E  +D        E       F        GILSP P +L  +   FFS
Sbjct: 133 ISNELGTFVGGEGTMDQYYHHHHQEQPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

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BLAST of Lcy07g001680 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.1e-04
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 25  PRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPGAAQWPQPLIIYDISPKVIHVAENN 84
           P PP L+V+++S  IKKPP           P     AA+   P+IIY  +P++IH    +
Sbjct: 41  PSPPTLKVNKDSHVIKKPP----------SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKD 100

Query: 85  FMSVVQRLTGLSSS 99
           FM++VQ+LTG++ S
Sbjct: 101 FMALVQKLTGMTHS 104

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BLAST of Lcy07g001680 vs. ExPASy TrEMBL
Match: A0A6J1G715 (protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.6e-97
Identity = 190/215 (88.37%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP SSAGGSP+TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPIPP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAH-DGDLSPAARLATIEKASP 120
           A+QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSS+A+  DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSL 180
           RS  EREREIDVSDMMDLTE  V+LGQ PGILSPAPA+LAPI +GFFSPAIEPQ+F+YSL
Sbjct: 121 RS--EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           IHELSPHWPSPSALFPA LVSPISSPNIFN+LFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

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BLAST of Lcy07g001680 vs. ExPASy TrEMBL
Match: A0A5A7TBE4 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00750 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.1e-96
Identity = 187/214 (87.38%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP  SA GSP+TPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQP+PP GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAHDGDLSPAARLATIEKASPR 120
            +QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS+A  DGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSLI 180
           S  EREREI+VSDMMDL E SV+LGQ PGILSPAP TLAPIPTG+FSPAIEPQ+FSYSL 
Sbjct: 121 S--EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLF 180

Query: 181 HELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           HELSPHWPSPSALF   L+SPISSPNIFNNLFDF
Sbjct: 181 HELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

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BLAST of Lcy07g001680 vs. ExPASy TrEMBL
Match: A0A1S3CD17 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.1e-96
Identity = 187/214 (87.38%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP  SA GSP+TPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQP+PP GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAHDGDLSPAARLATIEKASPR 120
            +QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS+A  DGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSLI 180
           S  EREREI+VSDMMDL E SV+LGQ PGILSPAP TLAPIPTG+FSPAIEPQ+FSYSL 
Sbjct: 121 S--EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLF 180

Query: 181 HELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           HELSPHWPSPSALF   L+SPISSPNIFNNLFDF
Sbjct: 181 HELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

[Close]

BLAST of Lcy07g001680 vs. ExPASy TrEMBL
Match: A0A6J1L2G0 (protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 188/215 (87.44%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP SSAGGSP+TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPIPP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSS-SAAHDGDLSPAARLATIEKASP 120
           A+QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSS S++ DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSL 180
           RS    EREIDVSDMMDLTE  V+LGQTPGILSPAPA+LAPI +GFFSP IEPQ+F+YSL
Sbjct: 121 RS----EREIDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           IHELSPHWPSPSALFPA LVSPISSPNIFN+LFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 211

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BLAST of Lcy07g001680 vs. ExPASy TrEMBL
Match: A0A0A0LK21 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.8e-94
Identity = 184/213 (86.38%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP  SA GSP+TPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQP+P  GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPQPGRPPLPPG 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAHDGDLSPAARLATIEKASPR 120
            +QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS+A  DGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSLI 180
           S  EREREI+VSDMMDL E SV+LGQ PGILSPAP TLAPIPTG+FSPAIEPQ+FSYSL 
Sbjct: 121 S--EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLF 180

Query: 181 HELSPHWPSPSALFPAALVSPISSPNIFNNLFD 214
           HELSPHW SPSALF   L+SPISSPNIFNNLFD
Sbjct: 181 HELSPHWASPSALFSTPLISPISSPNIFNNLFD 211

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BLAST of Lcy07g001680 vs. NCBI nr
Match: KAG6605314.1 (Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035269.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.1 bits (954), Expect = 3.3e-99
Identity = 192/215 (89.30%), Postives = 204/215 (94.88%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP SSAGGSP+TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPIPP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAH-DGDLSPAARLATIEKASP 120
           A+QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSS+A+  DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSL 180
           RSEREREREIDVSDMMDLTE  V+LGQ PGILSPAPA+LAPI +GFFSPAIEPQ+F+YSL
Sbjct: 121 RSEREREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           IHELSPHWPSPSALFPA LVSPISSPNIFN+LFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 215

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BLAST of Lcy07g001680 vs. NCBI nr
Match: XP_022947651.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 190/215 (88.37%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP SSAGGSP+TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPIPP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAH-DGDLSPAARLATIEKASP 120
           A+QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSS+A+  DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSAASSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSL 180
           RS  EREREIDVSDMMDLTE  V+LGQ PGILSPAPA+LAPI +GFFSPAIEPQ+F+YSL
Sbjct: 121 RS--EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           IHELSPHWPSPSALFPA LVSPISSPNIFN+LFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

[Close]

BLAST of Lcy07g001680 vs. NCBI nr
Match: XP_008460908.1 (PREDICTED: protein MKS1-like [Cucumis melo] >KAA0040772.1 protein MKS1-like [Cucumis melo var. makuwa] >TYK02088.1 protein MKS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 361.7 bits (927), Expect = 4.4e-96
Identity = 187/214 (87.38%), Postives = 196/214 (91.59%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP  SA GSP+TPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQP+PP GRPPLPPG
Sbjct: 1   MNPPGYSAAGSPTTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPVPPPGRPPLPPG 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSSSAAHDGDLSPAARLATIEKASPR 120
            +QWPQPLIIYDISPKVIHVAENNFMSVVQRLTG SS+A  DGDLSPAARLATIEKASPR
Sbjct: 61  PSQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGQSSTAVTDGDLSPAARLATIEKASPR 120

Query: 121 SEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSLI 180
           S  EREREI+VSDMMDL E SV+LGQ PGILSPAP TLAPIPTG+FSPAIEPQ+FSYSL 
Sbjct: 121 S--EREREINVSDMMDLAEVSVELGQIPGILSPAPGTLAPIPTGYFSPAIEPQSFSYSLF 180

Query: 181 HELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           HELSPHWPSPSALF   L+SPISSPNIFNNLFDF
Sbjct: 181 HELSPHWPSPSALFSTPLISPISSPNIFNNLFDF 212

[Close]

BLAST of Lcy07g001680 vs. NCBI nr
Match: XP_023533977.1 (protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 189/215 (87.91%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNP  SSAGGSP+TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPIPP GRPPLPP 
Sbjct: 1   MNPAGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSS-SAAHDGDLSPAARLATIEKASP 120
           A+QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSS S++ DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSTSSSTDGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSL 180
           RS  EREREIDVSDMMDLTE  V+LGQ PGILSPAPA+LAPI +GFFSPAIEPQ+F+YSL
Sbjct: 121 RS--EREREIDVSDMMDLTEVPVELGQNPGILSPAPASLAPISSGFFSPAIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           IHELSPHWPSPSALFPA LVSPISSPNIFN+LFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 213

[Close]

BLAST of Lcy07g001680 vs. NCBI nr
Match: XP_023007245.1 (protein MKS1-like [Cucurbita maxima])

HSP 1 Score: 359.4 bits (921), Expect = 2.2e-95
Identity = 188/215 (87.44%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTPRKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPG 60
           MNPP SSAGGSP+TPRKKEIQLQGPRPPQLRV+QESRKIKKPPPHPQPIPP GRPPLPP 
Sbjct: 1   MNPPGSSAGGSPNTPRKKEIQLQGPRPPQLRVNQESRKIKKPPPHPQPIPPSGRPPLPPA 60

Query: 61  AAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSS-SAAHDGDLSPAARLATIEKASP 120
           A+QWPQPLIIYDISPKV+HVAENNFMSVVQRLTGLSS S++ DGDLSPAAR ATIEKASP
Sbjct: 61  ASQWPQPLIIYDISPKVLHVAENNFMSVVQRLTGLSSASSSADGDLSPAARFATIEKASP 120

Query: 121 RSEREREREIDVSDMMDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAIEPQNFSYSL 180
           RS    EREIDVSDMMDLTE  V+LGQTPGILSPAPA+LAPI +GFFSP IEPQ+F+YSL
Sbjct: 121 RS----EREIDVSDMMDLTEVPVELGQTPGILSPAPASLAPISSGFFSPVIEPQSFTYSL 180

Query: 181 IHELSPHWPSPSALFPAALVSPISSPNIFNNLFDF 215
           IHELSPHWPSPSALFPA LVSPISSPNIFN+LFDF
Sbjct: 181 IHELSPHWPSPSALFPAPLVSPISSPNIFNHLFDF 211

[Close]

BLAST of Lcy07g001680 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 93/219 (42.47%), Postives = 127/219 (57.99%), Query Frame = 0


Query: 1   MNPPVSSAGGSPSTP--RKKEIQLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPP-- 60
           M+P    AGG+PS    +K+++Q+ GPRP  L V ++S KIKKPP HP P P   +PP  
Sbjct: 1   MDPSEYFAGGNPSDQQNQKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPY 60

Query: 61  LPPGAAQWPQPLIIYDISPKVIHVAENNFMSVVQRLTGLSS----SAAHDGDLSPAARLA 120
           +P       +P++IY +SPKV+H   + FM+VVQRLTG+SS     +   GD+SPAARLA
Sbjct: 61  IP------REPVVIYAVSPKVVHATASEFMNVVQRLTGISSGVFLESGGGGDVSPAARLA 120

Query: 121 TIEKASPRSERE---REREIDVSDMM-DLTEFSVDLGQTPGILSPAPATLAPIPTGFFSP 180
           + E ASPR  +E   R+  ++++  M +  EF    G  PGILSP+PA L    TG FSP
Sbjct: 121 STENASPRGGKEPAARDETVEINTAMEEAAEFG---GYAPGILSPSPALLPTASTGIFSP 180

Query: 181 AIEPQNFSYSLIHELSPHWPS-PSALF-PAALVSPISSP 206
                     + H+     P+ P  LF PA  +SP  SP
Sbjct: 181 ----------MYHQGGMFSPAIPLGLFSPAGFMSPFRSP 200

[Close]

BLAST of Lcy07g001680 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 78.2 bits (191), Expect = 9.0e-15
Identity = 85/242 (35.12%), Postives = 110/242 (45.45%), Query Frame = 0


Query: 14  TPRKKEIQLQGPRPPQLRVSQESRK-IKKP---PPHPQPIPPVGRPPLPPGAAQWPQPLI 73
           +PR + I   GPRP  L+V  +S K IKKP   PPHPQP PP      P  +   P P+I
Sbjct: 5   SPRSRGI--LGPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVI 64

Query: 74  IYDISPKVIHVAENNFMSVVQRLTG------------LSSSAAHD---------GDLSPA 133
           IY +SP++IH   NNFM++VQRLTG             S+SA  D         G +SPA
Sbjct: 65  IYTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKDASTMVDTSHGLISPA 124

Query: 134 ARLATIEKASPRSE---------------REREREIDVSDMMDLTEFSVDLGQTPGILSP 193
           AR A  EKA+  +E                                F        GILSP
Sbjct: 125 ARFAVTEKANISNELGTFVGGEGTMDQYYHYHHHHHHQEQQHQNQGFERPSFHHAGILSP 184

Query: 194 APATLAPIPTGFFSP--AIEPQNFSYSLIHELSPHWPSPSALFPAALVSPISSPNIFNNL 214
            P +L  +   FFS     +PQ FS S  ++ +    S     P+ + SP SS ++FNN 
Sbjct: 185 GPNSLPSVSPDFFSTIGPTDPQGFS-SFFNDFNSILQSS----PSKIQSP-SSMDLFNNF 238

[Close]

BLAST of Lcy07g001680 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 63/180 (35.00%), Postives = 83/180 (46.11%), Query Frame = 0


Query: 24  GPRPPQLRVSQESRK-IKKP---PPHPQPIPPVGRPPLPPGAAQWPQPLIIYDISPKVIH 83
           GP+P  L+V  +S K IKKP   PPHPQP PP      P  +   P P+ IY ++P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 84  VAENNFMSVVQRLTGLSSSA---------------------AHDGDLSPAARLATIEKAS 143
              NNFM++VQRLTG +S++                        G +SPAAR A  EKA+
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTMVDTSHGLISPAARFAVTEKAN 132

Query: 144 PRSERER----EREIDVSDMMDLTE-------FSVDLGQTPGILSPAPATLAPIPTGFFS 168
             +E       E  +D        E       F        GILSP P +L  +   FFS
Sbjct: 133 ISNELGTFVGGEGTMDQYYHHHHQEQPHQNRGFERPSFHHAGILSPGPYSLPSVSPDFFS 192

[Close]

BLAST of Lcy07g001680 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.2e-05
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 25  PRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPGAAQWPQPLIIYDISPKVIHVAENN 84
           P PP L+V+++S  IKKPP           P     AA+   P+IIY  +P++IH    +
Sbjct: 41  PSPPTLKVNKDSHVIKKPP----------SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKD 100

Query: 85  FMSVVQRLTGLSSS 99
           FM++VQ+LTG++ S
Sbjct: 101 FMALVQKLTGMTHS 104

[Close]

BLAST of Lcy07g001680 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.2e-04
Identity = 47/156 (30.13%), Postives = 73/156 (46.79%), Query Frame = 0


Query: 21  QLQGPRPPQLRVSQESRKIKKPPPHPQPIPPVGRPPLPPGAAQWPQPLIIYDISPKVIHV 80
           ++ G RP  L+++ ES  IKK         P GR            P+IIY  SPKVIH 
Sbjct: 8   EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGR----------ASPVIIYAHSPKVIHT 67

Query: 81  AENNFMSVVQRLTGL------SSSAAHDGDLSPAARLATIEKASPRSEREREREIDVSDM 140
              +FM++VQRLTGL      ++S +    ++    +     A+P S+   +R+  ++DM
Sbjct: 68  RAEDFMALVQRLTGLDEIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQ-KLTDM 127

Query: 141 MDLTEFSVDLGQTPGILSPAPATLAPIPTGFFSPAI 171
              T  S+ L  +P  L      ++P  T  F P +
Sbjct: 128 PLFTPSSMTLFGSPTQL----MYMSPNRTDSFRPLV 148

The following BLAST results are available for this feature:

BLAST of Lcy07g001680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD5	2.0e-27	42.47	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
F4HWF9	1.9e-09	35.00	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]
Q9LS54	3.1e-04	39.19	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]

BLAST of Lcy07g001680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G715	5.6e-97	88.37	protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451450 PE=4 SV=1	[more]
A0A5A7TBE4	2.1e-96	87.38	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00...	[more]
A0A1S3CD17	2.1e-96	87.38	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103499649 PE=4 SV=1	[more]
A0A6J1L2G0	1.1e-95	87.44	protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111499788 PE=4 SV=1	[more]
A0A0A0LK21	5.8e-94	86.38	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G302100 PE=4 SV=...	[more]

BLAST of Lcy07g001680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605314.1	3.3e-99	89.30	Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035269.1 Prot...	[more]
XP_022947651.1	1.2e-96	88.37	protein MKS1-like [Cucurbita moschata]	[more]
XP_008460908.1	4.4e-96	87.38	PREDICTED: protein MKS1-like [Cucumis melo] >KAA0040772.1 protein MKS1-like [Cuc...	[more]
XP_023533977.1	1.3e-95	87.91	protein MKS1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007245.1	2.2e-95	87.44	protein MKS1-like [Cucurbita maxima]	[more]

BLAST of Lcy07g001680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18690.1	1.4e-28	42.47	MAP kinase substrate 1	[more]
AT1G21326.1	9.0e-15	35.12	VQ motif-containing protein	[more]
AT1G21320.1	1.4e-10	35.00	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	2.2e-05	39.19	VQ motif-containing protein	[more]
AT1G68450.1	3.2e-04	30.13	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 73..98 e-value: 3.7E-10 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	PANTHER	PTHR33143:SF50	PROTEIN MKS1	coord: 9..212
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 9..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g001680.1	Lcy07g001680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus