Lcy07g001280 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGACAGGAAGCCGACAAGCTACAGATCTGGGCGCGGTAGTCGTAGCCCAGCCACCGGCACAGTTCAACTGCAGCTCGCCCGTCGTAGTCGTCCGTTCGTGATCCTCGTGCTGGAGATCTCGAGGATCTTGAAGAAATCTCGCCAGATCTGGGCGTGGGCGTGCGTGCGTGAGAAGGAGGGACAATGGGTGTGAGATCTGGGCGGGCGAACAGGCGTGAGAGAGACGGTGAGGGAGAGAAAGAGAGGAATGATGAGGGAGAGAGAAAGATAGAAGAAGAAAGAAAAAGAAAGAAAGAAAGAGGAAGAAAAGAAAAGAAAAAGAAAAGTTGGAGAAGATAGAAGGAAAGGAAAAAAAAAATCATTGCCGGCCGCCGGCCATGGAGGAAGATTGAAGAAGAAGAAGTAGTAGAAAGAGGAGGATGAGGAAGAAGAAGATGGAAGAGAGAAGAATAAAAAATAAAATAAAATAAAAAAAAATATTAATATTTGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTTACACTTTGGTTCCTAAGTTTTAAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGCAGCATTTTGGTCCCTGCCGTCTAATTTGTCGTTAGATGCTAACAAATTGCTGACATGGCCACATTTTTTTAATTAAAAAAATTATATTTTTTATTTTTAAAATAAAATTAAATAAAAACAATAAAATATTATTATTTTAATTATTTTTTAATCCCTTTCTTCTTCTCCACTTCTTCATCCTCTTCCCTCCACCCTATCTTCATCTTCTTCAAATCTCCTTGCTGGCGACCGGCGGCCGACCGGCGACTGTAACTTTTTTTTTTCTCTTTTCTTCTTCTCTCTTACCCCATTTTTCTTCTTTTCTTTTTTTTTTTAAAAAACAAATATAGAAGACTCCCTCCTCCTCCATCCTCCATTTCCGGACGGAAACAGAGTTTCCTCGCTAGAGAAGGCGCTCCAGGGTCCCTACGACCATATCCTCGAGACCTTCACTGAGAAGTACGTCCAGCCGAAGCTCTACGCCGCTGCCTTCCAGTCTCCTCCACCGCTGCCCTTGGCCAACGTCATGTCTCGCCTTCCCGTCCCCGACGTCAATCTGGTCCTTTCACTCGGATCCGTCAGCTCCACGACATCGTCTTCCATCGTCCTCCCTCTGTGGATGAACGTCAACTCCACCAGAACCGCTTCCTCTTCCACCTCGTCGACCACGCCCTTGCCATCGGTGAGCCTCACGCTATCTCCCTCTGAACCTGCCGCTCTCGACTTGGAAGAAGGCTGGCAGATCGGAGCCTTAGTCCAGCAGATCGGAGCAGATCGGAAGAAGGTAGCCCTCGCCGTTGTTCAGCAGATCGGAGCCCTAGTCCAGTACTGCAAGGAGTTGGAAGAAGGTCGGTAG ATGTTCGACAGGAAGCCGACAAGCTACAGATCTGGGCGCGGTAGTCGTAGCCCAGCCACCGGCACAGTTCAACTGCAGCTCGCCCGTCGTAGTCGTCCGTTCGTGATCCTCGTGCTGGAGATCTCGAGGATCTTGAAGAAATCTCGCCAGATCTGGGCGTGGGCGTGCGTGCAAGACTCCCTCCTCCTCCATCCTCCATTTCCGGACGGAAACAGAGTTTCCTCGCTAGAGAAGGCGCTCCAGGGTCCCTACGACCATATCCTCGAGACCTTCACTGAGAAGTACGTCCAGCCGAAGCTCTACGCCGCTGCCTTCCAGTCTCCTCCACCGCTGCCCTTGGCCAACGTCATGTCTCGCCTTCCCGTCCCCGACGTCAATCTGGTCCTTTCACTCGGATCCGTCAGCTCCACGACATCGTCTTCCATCGTCCTCCCTCTGTGGATGAACGTCAACTCCACCAGAACCGCTTCCTCTTCCACCTCGTCGACCACGCCCTTGCCATCGGTGAGCCTCACGCTATCTCCCTCTGAACCTGCCGCTCTCGACTTGGAAGAAGGCTGGCAGATCGGAGCCTTAGTCCAGCAGATCGGAGCAGATCGGAAGAAGGTAGCCCTCGCCGTTGTTCAGCAGATCGGAGCCCTAGTCCAGTACTGCAAGGAGTTGGAAGAAGGTCGGTAG ATGTTCGACAGGAAGCCGACAAGCTACAGATCTGGGCGCGGTAGTCGTAGCCCAGCCACCGGCACAGTTCAACTGCAGCTCGCCCGTCGTAGTCGTCCGTTCGTGATCCTCGTGCTGGAGATCTCGAGGATCTTGAAGAAATCTCGCCAGATCTGGGCGTGGGCGTGCGTGCAAGACTCCCTCCTCCTCCATCCTCCATTTCCGGACGGAAACAGAGTTTCCTCGCTAGAGAAGGCGCTCCAGGGTCCCTACGACCATATCCTCGAGACCTTCACTGAGAAGTACGTCCAGCCGAAGCTCTACGCCGCTGCCTTCCAGTCTCCTCCACCGCTGCCCTTGGCCAACGTCATGTCTCGCCTTCCCGTCCCCGACGTCAATCTGGTCCTTTCACTCGGATCCGTCAGCTCCACGACATCGTCTTCCATCGTCCTCCCTCTGTGGATGAACGTCAACTCCACCAGAACCGCTTCCTCTTCCACCTCGTCGACCACGCCCTTGCCATCGGTGAGCCTCACGCTATCTCCCTCTGAACCTGCCGCTCTCGACTTGGAAGAAGGCTGGCAGATCGGAGCCTTAGTCCAGCAGATCGGAGCAGATCGGAAGAAGGTAGCCCTCGCCGTTGTTCAGCAGATCGGAGCCCTAGTCCAGTACTGCAAGGAGTTGGAAGAAGGTCGGTAG MFDRKPTSYRSGRGSRSPATGTVQLQLARRSRPFVILVLEISRILKKSRQIWAWACVQDSLLLHPPFPDGNRVSSLEKALQGPYDHILETFTEKYVQPKLYAAAFQSPPPLPLANVMSRLPVPDVNLVLSLGSVSSTTSSSIVLPLWMNVNSTRTASSSTSSTTPLPSVSLTLSPSEPAALDLEEGWQIGALVQQIGADRKKVALAVVQQIGALVQYCKELEEGR Homology
BLAST of Lcy07g001280 vs. ExPASy TrEMBL
Match: A0A6J1GCE3 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452685 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 6.2e-46 Identity = 117/162 (72.22%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of Lcy07g001280 vs. ExPASy TrEMBL
Match: A0A6J1KCH4 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492624 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 6.8e-45 Identity = 115/162 (70.99%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of Lcy07g001280 vs. ExPASy TrEMBL
Match: A0A6J1FAF4 (protein rough sheath 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442290 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 7.8e-41 Identity = 107/161 (66.46%), Postives = 116/161 (72.05%), Query Frame = 0
BLAST of Lcy07g001280 vs. ExPASy TrEMBL
Match: A0A6J1IZB3 (protein rough sheath 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482044 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 5.6e-39 Identity = 105/161 (65.22%), Postives = 113/161 (70.19%), Query Frame = 0
BLAST of Lcy07g001280 vs. ExPASy TrEMBL
Match: A0A5D3CNU9 (Transcription factor AS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00170 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 9.3e-34 Identity = 96/163 (58.90%), Postives = 105/163 (64.42%), Query Frame = 0
BLAST of Lcy07g001280 vs. NCBI nr
Match: KAG7036747.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.1 bits (492), Expect = 1.3e-45 Identity = 117/162 (72.22%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of Lcy07g001280 vs. NCBI nr
Match: XP_022949284.1 (protein rough sheath 2 homolog [Cucurbita moschata]) HSP 1 Score: 194.1 bits (492), Expect = 1.3e-45 Identity = 117/162 (72.22%), Postives = 121/162 (74.69%), Query Frame = 0
BLAST of Lcy07g001280 vs. NCBI nr
Match: XP_023525837.1 (protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.7 bits (491), Expect = 1.7e-45 Identity = 117/163 (71.78%), Postives = 121/163 (74.23%), Query Frame = 0
BLAST of Lcy07g001280 vs. NCBI nr
Match: XP_023521553.1 (transcription factor AS1-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-44 Identity = 113/154 (73.38%), Postives = 117/154 (75.97%), Query Frame = 0
BLAST of Lcy07g001280 vs. NCBI nr
Match: XP_022997764.1 (protein rough sheath 2 homolog [Cucurbita maxima]) HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44 Identity = 115/162 (70.99%), Postives = 120/162 (74.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|