Lcy07g001070 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g001070
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Retrotransposon protein
Location	Chr07: 2829706 .. 2831605 (-)
RNA-Seq Expression	Lcy07g001070
Synteny	Lcy07g001070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAGGTTGAAGGAGGCAAAATTGGTTGAAAGCCTCGTGGAGCTTGTACATGAAGGTGGGTGACGAGGTGATAATGGAACGTTCAAACCCGACTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGAATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGACAGTACAGTGCGATTAACAATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATAAGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGGTACGGTCATTATTCATTAATTGGTTTAATGCCTGTATATTCCAACGTTCCATAAATCCACTGTCGTATATGCAGTCCCACTCAGCTGCAAAGGGTCTACTGAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTGTTCGGCAAGGATCGAGCTAGTGGATCGGGGTGCGATGTACCAGCGGAACAAGCTGCAGAAAGCCCTCCAGTGGACGCAGAGGGGGATTCCAACTTCTAGGGGACACGGGATTATTATGCCCCCATCCCTCTAGTAGAAAATTTGGCCACGGACGTCGAGTTTGAGGACGTCCCCATAACGCCCATGAGCCGACCGAGCACAGCGGGTTCCTCATAGGGTCGGAAGAGGAGTAGAGCATCATATGAAGCAGAAGCCTTGGAAATAATGAGGTAGACAGTCAGCATACAGGAGACACAATTCACAAAAATCGCTGACTGGCCAAACACACAAGACACCAGGGAGTTCAAGAGGCGAGAAACAGTTGGGGAGATGCTCATGACTCAACCGGAGCTAACAGATCGCGAGAGAGTCTCCCTTATGCGTATCCTCTTCGCCGACACAAAGATGACCAATATGATGTTGTCCATCCCCCCGACCCTTAAGCTCCAATTCCTCCGCGATCTTCTTGAAGAACGCCGCTGATGTCAAAACAGTCTATCCTCCATCATTACTTTTGTCATGTAAATTTTAACGATGTGTACTTTTCCCTGGCCCACGATAATTTCTTGTTCATTGTCTTTTTGTCAACCCAAATCTAAATTTTTTGTAGAGAGTTAATTGTATACTGACTGATATATATGATAAACAAAGTTTGAATTTTTTGCAGTAACTTTTCCTCTGTCTTACGATTGTTTAAATGTTGTCCAACGCGTTCTTCTTTTCCAATGTCACTAACAATAGGAGAACGTGTCTAAGTCTAATTGTAAGAAAGTAGAATTATAATCAGTGTTATTTAATTTCGAATAGATTATTCATTCATGGTTATGCATTTCTTAACGAGCCTAATATAGATGTATGTGTATAACGATTATTCATATCCATTAGGATCACCGATCAGTGTCGTCAAATGTTACAGACGATCTGGTGGACAATGTGTCTGACACAAGCAGCAGTAATGTGGGGCCAACTGAGAGATCAACAGGATCAAGTAGTAGAAGACGAACTTCATATAACAGAGAGATGATGGAGGTCGTGACGGCTGCAATGGATAGCCAAATTACCAGCCTTCAAAAGATTGCATCATGGCGAGAACAAAAACACGAACGGGAGGCTGCGCGACGGAAGTTGGTGGTCGAGCAAATTCAAGAAATAGAACAGTTTGAAGAAGGAGAGAAAAAACAACTTCTGAATGTCTTGCTCGCTGATATGAAAACAATTGAATTTTTCCTTGCCCTGCCCATGCCTTTAAAAAAAACATTGCATGGATGTACTTGGAAGAAACGAATGACTGGCTGTTACTGCAACCACTATTTCGATTGTGTAATATTTGTTTATGTTCAAGGATGGTTTGACTATCTTTCTGCTTTTCATGGAAACTTCTGCTTTCTAGAAAGAAATATTTTGCATGTGTAA

mRNA sequence

ATGGACGAGGTTGAAGGAGGCAAAATTGGTGATAATGGAACGTTCAAACCCGACTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGAATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGACAGTACAGTGCGATTAACAATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATAAGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGTCCCACTCAGCTGCAAAGGGTCTACTGAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTGTTCGGCAAGGATCGAGCTAGTGGATCGGGGTGCGATGATCACCGATCAGTGTCGTCAAATGTTACAGACGATCTGGTGGACAATGTGTCTGACACAAGCAGCAGTAATGTGGGGCCAACTGAGAGATCAACAGGATCAAGTAGTAGAAGACGAACTTCATATAACAGAGAGATGATGGAGGTCGTGACGGCTGCAATGGATAGCCAAATTACCAGCCTTCAAAAGATTGCATCATGGCGAGAACAAAAACACGAACGGGAGGCTGCGCGACGGAAGTTGGTGGTCGAGCAAATTCAAGAAATAGAACAGTTTGAAGAAGGAGAGAAAAAACAACTTCTGAATGTCTTGCTCGCTGATATGAAAACAATTGAATTTTTCCTTGCCCTGCCCATGCCTTTAAAAAAAACATTGCATGGATGTACTTGGAAGAAACGAATGACTGGCTGTTACTGCAACCACTATTTCGATTGTGTAATATTTGTTTATGTTCAAGGATGGTTTGACTATCTTTCTGCTTTTCATGGAAACTTCTGCTTTCTAGAAAGAAATATTTTGCATGTGTAA

Coding sequence (CDS)

ATGGACGAGGTTGAAGGAGGCAAAATTGGTGATAATGGAACGTTCAAACCCGACTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGAATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGACAGTACAGTGCGATTAACAATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATAAGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGTCCCACTCAGCTGCAAAGGGTCTACTGAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTGTTCGGCAAGGATCGAGCTAGTGGATCGGGGTGCGATGATCACCGATCAGTGTCGTCAAATGTTACAGACGATCTGGTGGACAATGTGTCTGACACAAGCAGCAGTAATGTGGGGCCAACTGAGAGATCAACAGGATCAAGTAGTAGAAGACGAACTTCATATAACAGAGAGATGATGGAGGTCGTGACGGCTGCAATGGATAGCCAAATTACCAGCCTTCAAAAGATTGCATCATGGCGAGAACAAAAACACGAACGGGAGGCTGCGCGACGGAAGTTGGTGGTCGAGCAAATTCAAGAAATAGAACAGTTTGAAGAAGGAGAGAAAAAACAACTTCTGAATGTCTTGCTCGCTGATATGAAAACAATTGAATTTTTCCTTGCCCTGCCCATGCCTTTAAAAAAAACATTGCATGGATGTACTTGGAAGAAACGAATGACTGGCTGTTACTGCAACCACTATTTCGATTGTGTAATATTTGTTTATGTTCAAGGATGGTTTGACTATCTTTCTGCTTTTCATGGAAACTTCTGCTTTCTAGAAAGAAATATTTTGCATGTGTAA

Protein sequence

MDEVEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLKKTLHGCTWKKRMTGCYCNHYFDCVIFVYVQGWFDYLSAFHGNFCFLERNILHV

Homology

[Close]

BLAST of Lcy07g001070 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.2e-46
Identity = 108/265 (40.75%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L+RM+  K+P   I+ +STID  V+SLK+ Y AI  M GP CS
Sbjct: 31  GGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDDHR 125
           GFGWNEE++CI+AE+++FD W+KSH AAKGLL+K FP+Y++L++VFGKDRA+G+  +   
Sbjct: 91  GFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFP 150

Query: 126 SVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSR 185
           +V SNV++   D +   D+   ++ PT  S G                         S R
Sbjct: 151 NVGSNVSNMFNDTIPLGDSHDEDI-PTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKR 210

Query: 186 RRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEK 245
           +R S   E +EV+ + M+     L+ IA W ++K   E   R  VV+Q+Q+I +    ++
Sbjct: 211 KRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDR 270

[Close]

BLAST of Lcy07g001070 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.2e-46
Identity = 108/265 (40.75%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L+RM+  K+P   I+ +STID  V+SLK+ Y AI  M GP CS
Sbjct: 31  GGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDDHR 125
           GFGWNEE++CI+AE+++FD W+KSH AAKGLL+K FP+Y++L++VFGKDRA+G+  +   
Sbjct: 91  GFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFP 150

Query: 126 SVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSR 185
           +V SNV++   D +   D+   ++ PT  S G                         S R
Sbjct: 151 NVGSNVSNMFNDTIPLGDSHDEDI-PTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKR 210

Query: 186 RRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEK 245
           +R S   E +EV+ + M+     L+ IA W ++K   E   R  VV+Q+Q+I +    ++
Sbjct: 211 KRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDR 270

[Close]

BLAST of Lcy07g001070 vs. ExPASy TrEMBL
Match: A0A5A7VKT2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G001150 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.5e-39
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDDHR 125
           GFGWN+E KCI+AEKE+FD WV+SH AAKGLLNKPFP+Y+EL +VFG+DRA+G   +   
Sbjct: 91  GFGWNDEVKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 126 SVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQK 185
            V SN      D       +   P    +  S R+R S     +E +  A+D     L++
Sbjct: 151 DVGSNELGGGYDRFDIGDGNEDFPPMTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQ 210

Query: 186 IASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP 241
           IA W  +    +   R      ++E+ +    ++  L   LL+ M  +  F+ +P
Sbjct: 211 IAEWPSRNLANDNHVRTEFFRILREMPELTSLDRALLQMHLLSHMDDLWGFVLMP 265

[Close]

BLAST of Lcy07g001070 vs. ExPASy TrEMBL
Match: A0A5A7VCA3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001180 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.7e-39
Identity = 98/259 (37.84%), Postives = 142/259 (54.83%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAKMRGPACS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRAS-------- 125
           GFGWN+E KCIVAEKE+FD WV+SH AAKGLLNKPFP+Y+EL +VFG+DRA+        
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 126 ----------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRR 185
                           G G +D  SV +   D   D+V  +  S+       +  S R+R
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPSVYNQGVDISQDDVRASRPSHASEGRTGSSGSKRKR 210

Query: 186 TSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQ 241
            S     +E +  A+D     L++IA W  +    +   R      ++E+ +    ++  
Sbjct: 211 GSQRDFKLEAIHLALDQTKEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

[Close]

BLAST of Lcy07g001070 vs. ExPASy TrEMBL
Match: A0A5D3CWL2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00640 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.2e-38
Identity = 98/259 (37.84%), Postives = 140/259 (54.05%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRAS-------- 125
           GFGWN+E KCIVAEKE+FD WV+SH AAKGLLNKPFP+Y+EL +VFG+DRA+        
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 126 ----------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRR 185
                           G G +D   V S   D   D+V  +  S        +  S R+R
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRKR 210

Query: 186 TSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQ 241
            S     +E +  A+D     L++IA W  +    +   R      ++E+ +    ++  
Sbjct: 211 GSQRDFELEAIHVALDQTNEQLREIAQWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

[Close]

BLAST of Lcy07g001070 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-45
Identity = 108/265 (40.75%), Postives = 161/265 (60.75%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L+RM+  K+P   I+ +STID  V+SLK+ Y AI  M GP CS
Sbjct: 31  GGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDDHR 125
           GFGWNEE++CI+AE+++FD W+KSH AAKGLL+K FP+Y++L++VFGKDRA+G+  +   
Sbjct: 91  GFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFP 150

Query: 126 SVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSR 185
           +V SNV++   D +   D+   ++ PT  S G                         S R
Sbjct: 151 NVGSNVSNMFNDTIPLGDSHDEDI-PTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKR 210

Query: 186 RRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEK 245
           +R S   E +EV+ + M+     L+ IA W ++K   E   R  VV+Q+Q+I +    ++
Sbjct: 211 KRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDR 270

[Close]

BLAST of Lcy07g001070 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida])

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-41
Identity = 100/243 (41.15%), Postives = 159/243 (65.43%), Query Frame = 0


Query: 4   VEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPG 63
           VE G   DNGTF+P YL  L+++L  K+P C + + +TI+ KVRSLK+QY+A++ ML   
Sbjct: 28  VETGWRSDNGTFRPGYLQHLEQILHEKVPGCAL-NKNTIECKVRSLKKQYNAVSEMLSQ- 87

Query: 64  CSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDD 123
            SGF WNEE+KC+  E+E+FD WV+SH  AKG+  KPFPHY++L+ VFGKDRA     + 
Sbjct: 88  -SGFNWNEEFKCVQVEREIFDLWVRSHPNAKGMWKKPFPHYDDLSAVFGKDRADCHTPEV 147

Query: 124 HRSVSSNVTDDLVDNVSDTSSSNVG-PTERSTGSSSRRRTSYNREMMEVVTAAMDSQITS 183
            ++ S    D++ +  ++ S+     PTE S G S R+R+S+  EM+++V + ++ Q T 
Sbjct: 148 RQTESPLNQDEIDEEPAEQSTGRASVPTESSRG-SKRKRSSFQVEMIDIVKSTVEMQSTH 207

Query: 184 LQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMP 243
           + ++ASW+ +K+E E    K VV  I  I+  EE ++  L+++++ D++  + FLA+P  
Sbjct: 208 MGRLASWQNEKYELEL---KEVVNAIYNIDDLEENDQVTLIDLIVTDIQKTDCFLAVPEH 263

Query: 244 LKK 246
            +K
Sbjct: 268 ARK 263

[Close]

BLAST of Lcy07g001070 vs. NCBI nr
Match: XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida])

HSP 1 Score: 179.1 bits (453), Expect = 5.6e-41
Identity = 97/242 (40.08%), Postives = 157/242 (64.88%), Query Frame = 0


Query: 4   VEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPG 63
           VE G   DNGTF+  YL  L+R+L  K+P C + + +TI+ KVRSLK+QY+A++ ML   
Sbjct: 28  VETGWRSDNGTFRLGYLQYLERILHEKVPGCAL-NQNTIECKVRSLKKQYNAVSEMLSQ- 87

Query: 64  CSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDD 123
            SGFGWNEE+KC+  EKE+FD WV+SH  AKG+ NK F HY++L+ VFGKDRA+    + 
Sbjct: 88  -SGFGWNEEFKCVQVEKEIFDLWVRSHLNAKGMWNKSFLHYDDLSTVFGKDRANCHTPEV 147

Query: 124 HRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSL 183
            ++ S    D++ +  ++ S+        S+  S R+R S+  EM++++ + ++ Q T +
Sbjct: 148 CQAESPLNQDEIDEEPAEQSTGRASVLAESSRGSKRKRPSFQAEMIDIMRSTVEMQSTHM 207

Query: 184 QKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPL 243
            ++ASW+++K+E E  RRK VV  I  I+  +E ++   +++L+ D++  + FLA+P   
Sbjct: 208 GRLASWQKEKYELEFGRRKEVVNAIYSIDGLDEDDQVTFIDLLVTDIQKTDCFLAVPEHA 266

Query: 244 KK 246
           +K
Sbjct: 268 RK 266

[Close]

BLAST of Lcy07g001070 vs. NCBI nr
Match: KAA0065929.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-39
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGCDDHR 125
           GFGWN+E KCI+AEKE+FD WV+SH AAKGLLNKPFP+Y+EL +VFG+DRA+G   +   
Sbjct: 91  GFGWNDEVKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 126 SVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQK 185
            V SN      D       +   P    +  S R+R S     +E +  A+D     L++
Sbjct: 151 DVGSNELGGGYDRFDIGDGNEDFPPMTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQ 210

Query: 186 IASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP 241
           IA W  +    +   R      ++E+ +    ++  L   LL+ M  +  F+ +P
Sbjct: 211 IAEWPSRNLANDNHVRTEFFRILREMPELTSLDRALLQMHLLSHMDDLWGFVLMP 265

[Close]

BLAST of Lcy07g001070 vs. NCBI nr
Match: KAA0064810.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 2.0e-38
Identity = 98/259 (37.84%), Postives = 142/259 (54.83%), Query Frame = 0


Query: 6   GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCS 65
           GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CS
Sbjct: 31  GGWKSDNGTFRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAKMRGPACS 90

Query: 66  GFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRAS-------- 125
           GFGWN+E KCIVAEKE+FD WV+SH AAKGLLNKPFP+Y+EL +VFG+DRA+        
Sbjct: 91  GFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFA 150

Query: 126 ----------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRR 185
                           G G +D  SV +   D   D+V  +  S+       +  S R+R
Sbjct: 151 DVGSNEPGGGYDRFDMGDGNEDFPSVYNQGVDISQDDVRASRPSHASEGRTGSSGSKRKR 210

Query: 186 TSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQ 241
            S     +E +  A+D     L++IA W  +    +   R      ++E+ +    ++  
Sbjct: 211 GSQRDFKLEAIHLALDQTKEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRAL 270

[Close]

BLAST of Lcy07g001070 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-08
Identity = 22/80 (27.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 42  IDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPF 101
           + ++ +SL+RQ++AI ++L     GF W+ E + + A+  V+ +++K+H  A+  + +P 
Sbjct: 237 LKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPI 296

Query: 102 PHYEELAFVFGKDRASGSGC 122
           P+Y++L  + G      + C
Sbjct: 297 PYYKDLCVLCGDSGIEENEC 314

[Close]

BLAST of Lcy07g001070 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 57.0 bits (136), Expect = 3.0e-08
Identity = 22/80 (27.50%), Postives = 48/80 (60.00%), Query Frame = 0


Query: 42  IDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPF 101
           + ++ +SL+RQ++AI ++L     GF W+ E + + A+  V+ +++K+H  A+  + +P 
Sbjct: 237 LKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPI 296

Query: 102 PHYEELAFVFGKDRASGSGC 122
           P+Y++L  + G      + C
Sbjct: 297 PYYKDLCVLCGDSGIEENEC 314

[Close]

BLAST of Lcy07g001070 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 4.8e-06
Identity = 26/76 (34.21%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 44  SKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPH 103
           S+++ LK  Y +  + L    SGFGW+ E K   A  EV+ +++K+H   K +  +   H
Sbjct: 68  SRLKFLKNLYQSYLD-LKRFSSGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDH 127

Query: 104 YEELAFVFGKDRASGS 120
           +E+L  +FG   A+GS
Sbjct: 128 FEDLQIIFGDVVATGS 142

The following BLAST results are available for this feature:

BLAST of Lcy07g001070 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g001070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0H7	6.2e-46	40.75	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	6.2e-46	40.75	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5A7VKT2	1.5e-39	40.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7VCA3	9.7e-39	37.84	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CWL2	2.2e-38	37.84	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy07g001070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	1.3e-45	40.75	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
XP_038887234.1	1.1e-41	41.15	uncharacterized protein LOC120077425 [Benincasa hispida]	[more]
XP_038896380.1	5.6e-41	40.08	uncharacterized protein LOC120084641 [Benincasa hispida]	[more]
KAA0065929.1	3.1e-39	40.00	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0064810.1	2.0e-38	37.84	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy07g001070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02210.1	3.0e-08	27.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	3.0e-08	27.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G30140.1	4.8e-06	34.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..162
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 9..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g001070.1	Lcy07g001070.1	mRNA