Lcy07g000930 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g000930
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Transmembrane protein
Location	Chr07: 2530261 .. 2531467 (+)
RNA-Seq Expression	Lcy07g000930
Synteny	Lcy07g000930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTCCTTTCCATTTCAATTCAGCCCTCTCTCGATCCCCTCTCTCTTCCTCCATCTAGAGTTTCAAGCGTCAGCTCTCCTGAATCCGCCGGAGCCCACCGACCGGCGACCGGCAACCGAAAACTGCCGCGCCTCTCATCCTCATCTGATAGCGACCTTCTCTGCCCCTACAGTACATTTTCTTTTTCCTTTCCTTAATTTTCAATTGATCAGATCAAAGTACATCGATATTCAACAGAATCATCTACACTTTCATTTCTAGAATTCCCCTTCAATTAGCTCCTATTGCTTTCTCCTTATTATGTGATATCTTCAAATTCCGATTAAGCTTTCCGATCTTTTATTGGTAGTTTAGTTCATAACTTTAAGAAGAGAGTGCCAATGATTCTCTTTCTGAAGCTTTTGTTGTGAGCTTTAATTTGTTTTTGCTTTTGATTGTTAAACTTTGTTCCTTCTATTACAACTTTCAGATAACTGAGCAACTAGTGAGGTCTTCATTGTACTGATTAGTTGGTAATAGAAAGGGGGTAATGGAAACTCAGCAGAAGGAAGAAGATAAGTTAACTGCTCCTGCTAGTTCCACTGGGTTTTTGGGTAAATTGGAAGAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCCTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGAAAGCTCCGGAAGACCGAGGACAGAGTACGCGTGCTACAGGAGAAGCTTCGACAGCGTTACGAAGCCGAACAATCAGCCAAACAATCGGCAAATTCAGTGGCATCAGCTGAAAAAGTTTCACAATCTGTTAGACAGCCTCCCTCCAAGCAGTAACCAGGTTTTGAACTAGTTTTCTTTTTTGTTCCTCATCCCCCACCCGGAAAAGAAGATATTGATTGGATATATACCACATGGCCAATTGAGAAGAGTTCCAACGTGTGGTGATTTTGGAAGAATAGTTAGATTTCATGCCACATTTTCTTCTGACTAGTAATTTTTGTTGAGGTAGAGCATTTTTTTTAAATGTTGAATACGTTAGACTTCTAATAACTTAATTAGAGGGGCTTTTTTAAAGGTAGCTTTTGATATTGTTTTATATGCTGGATGTGATAAAATAAGTTCAATATCACTCTTGGAGCTATTGTTTTAAAGGTAGCTTTTGATATTGTTTTATA

mRNA sequence

TAATTCCTTTCCATTTCAATTCAGCCCTCTCTCGATCCCCTCTCTCTTCCTCCATCTAGAGTTTCAAGCGTCAGCTCTCCTGAATCCGCCGGAGCCCACCGACCGGCGACCGGCAACCGAAAACTGCCGCGCCTCTCATCCTCATCTGATAGCGACCTTCTCTGCCCCTACAATAACTGAGCAACTAGTGAGGTCTTCATTGTACTGATTAGTTGGTAATAGAAAGGGGGTAATGGAAACTCAGCAGAAGGAAGAAGATAAGTTAACTGCTCCTGCTAGTTCCACTGGGTTTTTGGGTAAATTGGAAGAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCCTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGAAAGCTCCGGAAGACCGAGGACAGAGTACGCGTGCTACAGGAGAAGCTTCGACAGCGTTACGAAGCCGAACAATCAGCCAAACAATCGGCAAATTCAGTGGCATCAGCTGAAAAAGTTTCACAATCTGTTAGACAGCCTCCCTCCAAGCAGTAACCAGGTTTTGAACTAGTTTTCTTTTTTGTTCCTCATCCCCCACCCGGAAAAGAAGATATTGATTGGATATATACCACATGGCCAATTGAGAAGAGTTCCAACGTGTGGTGATTTTGGAAGAATAGTTAGATTTCATGCCACATTTTCTTCTGACTAGTAATTTTTGTTGAGGTAGAGCATTTTTTTTAAATGTTGAATACGTTAGACTTCTAATAACTTAATTAGAGGGGCTTTTTTAAAGGTAGCTTTTGATATTGTTTTATATGCTGGATGTGATAAAATAAGTTCAATATCACTCTTGGAGCTATTGTTTTAAAGGTAGCTTTTGATATTGTTTTATA

Coding sequence (CDS)

ATGGAAACTCAGCAGAAGGAAGAAGATAAGTTAACTGCTCCTGCTAGTTCCACTGGGTTTTTGGGTAAATTGGAAGAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCCTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGAAAGCTCCGGAAGACCGAGGACAGAGTACGCGTGCTACAGGAGAAGCTTCGACAGCGTTACGAAGCCGAACAATCAGCCAAACAATCGGCAAATTCAGTGGCATCAGCTGAAAAAGTTTCACAATCTGTTAGACAGCCTCCCTCCAAGCAGTAA

Protein sequence

METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ

Homology

[Close]

BLAST of Lcy07g000930 vs. ExPASy TrEMBL
Match: A0A6J1G8F0 (uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC111451821 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.5e-48
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1   METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           METQ+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ 112
           RKLRKTEDRVR LQEKLRQRYEAEQSAKQSANSVAS EKVSQSV+QPPS Q
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Lcy07g000930 vs. ExPASy TrEMBL
Match: A0A6J1L783 (uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.3e-48
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1   METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           ME Q+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   MEAQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ 112
           RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVAS EKVSQSV+QPPS Q
Sbjct: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Lcy07g000930 vs. ExPASy TrEMBL
Match: A0A6J1D6P5 (uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017444 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.6e-39
Identity = 88/111 (79.28%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET +KEED++T PA+S+GF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ 112
           RKLRKTEDRVR LQEKLR+RYEAE    QSA+SVAS EK   SV+QP SK+
Sbjct: 61  RKLRKTEDRVRXLQEKLRRRYEAE----QSASSVASVEKDPPSVKQPSSKE 107

[Close]

BLAST of Lcy07g000930 vs. ExPASy TrEMBL
Match: A0A1S3CCY7 (uncharacterized protein LOC103499620 OS=Cucumis melo OX=3656 GN=LOC103499620 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.4e-29
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 4  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63
          ++K  DKL   +SS+ F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKL
Sbjct: 6  EEKGGDKLNGVSSSSSFSGKLVHKYREIKENAEKYPYVWGSYIIVYGGMFLWAGYRWRKL 65

Query: 64 RKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV 95
          RKTEDRVR+LQEKLRQ YEAEQS+ KQSANSV
Sbjct: 66 RKTEDRVRILQEKLRQHYEAEQSSIKQSANSV 97

[Close]

BLAST of Lcy07g000930 vs. ExPASy TrEMBL
Match: A0A5D3BSB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00480 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.4e-29
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 4  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63
          ++K  DKL   +SS+ F GKL  KYREIKENAE YPYVWGSYI+VYGG  LW GYRWRKL
Sbjct: 6  EEKGGDKLNGVSSSSSFSGKLVHKYREIKENAEKYPYVWGSYIIVYGGMFLWAGYRWRKL 65

Query: 64 RKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV 95
          RKTEDRVR+LQEKLRQ YEAEQS+ KQSANSV
Sbjct: 66 RKTEDRVRILQEKLRQHYEAEQSSIKQSANSV 97

[Close]

BLAST of Lcy07g000930 vs. NCBI nr
Match: XP_022948157.1 (uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948159.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_023534704.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo] >XP_023534706.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo] >KAG7035292.1 hypothetical protein SDJN02_02087 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.1 bits (510), Expect = 5.2e-48
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1   METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           METQ+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ 112
           RKLRKTEDRVR LQEKLRQRYEAEQSAKQSANSVAS EKVSQSV+QPPS Q
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Lcy07g000930 vs. NCBI nr
Match: XP_023007268.1 (uncharacterized protein LOC111499806 [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 6.7e-48
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 1   METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           ME Q+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   MEAQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ 112
           RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVAS EKVSQSV+QPPS Q
Sbjct: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPSNQ 111

[Close]

BLAST of Lcy07g000930 vs. NCBI nr
Match: KAG6605336.1 (hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 101/109 (92.66%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           METQ+KEED LTAPASS+GFLGKLEEKY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPS 110
           RKLRKTEDRVR LQEKLRQRYEAEQSAKQSANSVAS EKVSQSV+QPPS
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQPPS 109

[Close]

BLAST of Lcy07g000930 vs. NCBI nr
Match: XP_022148881.1 (uncharacterized protein LOC111017444 [Momordica charantia])

HSP 1 Score: 170.6 bits (431), Expect = 7.5e-39
Identity = 88/111 (79.28%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 1   METQQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET +KEED++T PA+S+GF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVSQSVRQPPSKQ 112
           RKLRKTEDRVR LQEKLR+RYEAE    QSA+SVAS EK   SV+QP SK+
Sbjct: 61  RKLRKTEDRVRXLQEKLRRRYEAE----QSASSVASVEKDPPSVKQPSSKE 107

[Close]

BLAST of Lcy07g000930 vs. NCBI nr
Match: XP_038900834.1 (uncharacterized protein LOC120087898 [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 5.3e-37
Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 4  QQKEEDKLTAPASSTGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63
          ++KEEDKL   ASS GFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKL
Sbjct: 6  EEKEEDKLYGVASSIGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 65

Query: 64 RKTEDRVRVLQEKLRQRYEAEQ-SAKQSANSV 95
          RKTEDRVRVLQEKLRQRYEAEQ SAKQSANSV
Sbjct: 66 RKTEDRVRVLQEKLRQRYEAEQSSAKQSANSV 97

[Close]

BLAST of Lcy07g000930 vs. TAIR 10
Match: AT5G09270.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 8   EDKLTAPAS-STGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKT 67
           ED+ + P+  + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+T
Sbjct: 9   EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68

Query: 68  EDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVS 102
           EDRVR LQ KLR+  E EQ+A  ++ S  S +K S
Sbjct: 69  EDRVRGLQTKLRKLVENEQAAVTASKSAQSVDKSS 103

[Close]

BLAST of Lcy07g000930 vs. TAIR 10
Match: AT5G09270.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 53/95 (55.79%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 8   EDKLTAPAS-STGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKT 67
           ED+ + P+  + GF+G +EE+Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+T
Sbjct: 9   EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68

Query: 68  EDRVRVLQEKLRQRYEAEQSAKQSANSVASAEKVS 102
           EDRVR LQ KLR+  E EQ+A  ++ S  S +K S
Sbjct: 69  EDRVRGLQTKLRKLVENEQAAVTASKSAQSVDKSS 103

The following BLAST results are available for this feature:

BLAST of Lcy07g000930 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g000930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G8F0	2.5e-48	91.89	uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC1114518...	[more]
A0A6J1L783	3.3e-48	91.89	uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806...	[more]
A0A6J1D6P5	3.6e-39	79.28	uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A1S3CCY7	3.4e-29	76.09	uncharacterized protein LOC103499620 OS=Cucumis melo OX=3656 GN=LOC103499620 PE=...	[more]
A0A5D3BSB4	3.4e-29	76.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy07g000930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948157.1	5.2e-48	91.89	uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 unchar...	[more]
XP_023007268.1	6.7e-48	91.89	uncharacterized protein LOC111499806 [Cucurbita maxima]	[more]
KAG6605336.1	1.5e-47	92.66	hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022148881.1	7.5e-39	79.28	uncharacterized protein LOC111017444 [Momordica charantia]	[more]
XP_038900834.1	5.3e-37	92.39	uncharacterized protein LOC120087898 [Benincasa hispida]	[more]

BLAST of Lcy07g000930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09270.1	1.2e-23	55.79	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G09270.2	1.2e-23	55.79	unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..111
None	No IPR available	PANTHER	PTHR36794	TRANSMEMBRANE PROTEIN	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g000930.1	Lcy07g000930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane