Lcy07g000850 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g000850
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
LocationChr07: 2126018 .. 2130037 (-)
RNA-Seq ExpressionLcy07g000850
SyntenyLcy07g000850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAATGATTACTATGACTTTGAAGAAGAATTGCCCTTGAAATGGGAACTCAAAGTGTTGTCTTATGATGAATAGTAAGAAATGCATATGTCGAAACGATTTGCAAAGATTTGTTGAAATAGATAAGACTGTCTAAGGACGAAATAAAGAAAACAAATACTTACTTGAGTGAAAGAGAAGGATAGCTTTGCAAGAGAAAGTTGTTGAGAAATAAGAACTTTTATTTTCAAACAAAAGATATTAAGCACTAGTTCCTTTCTCTCAAGGAAAGCTGAAGACTGAAGACGCTCGATCAAGAAACTCTGTTCCTAGATAGAAATGACTAAGTTTCCTTTAGAGGGAGATAGGAAGCTAGTATTTACAATGTGTGTACAAGAGAGGACACATAATTTACAAAGCTAGTAAGTAAAATCATTAAAGATACTTGTACATTCTTTTCTTCTTCTTCAATTAAGAATTTGGTGTTGACGGGTCTTCATCTTCATTTTACATTGATGTCTTATCTTGATTACTAATTGGAATCAATTAGTTTTGTCTAAGTATAGATGTGTTGGGTAAAACTGACAAATTCATCTTCATCTTGATCAATTTGATTGTCACATGTGTCATCTTCTTGACTAGTACTAGATGGAGATGAAATCTATTGAAATAAGAAAAATTGAAATCATTCTTAACAATACCATAGTTCAAGGACTTGATTGTGAAAATACATAAAATTTATAATGTTTTTTGCATTCCCCAATACTTGGGGATTTAATGGCAACAATTTCGTAGCATCATAAATTAAAAATCAATAATAGTGTCATTTTTTCCATATGAAAATCAACAGCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCAATTTTTGGTTTTCGCTTTTTTTTTCCTCCAATGCTCCATTTACCTACTTTTCATTGTCTTTATGGTTTCTACATAATTTTATTTTTAGTTTGGTTCTTATACTTTTAAAATTTTTTGTTTTACCATTTCAATTACTTTTTATTTTTAACATTGAAATATAAAAATATTTTTATATATCCTAGTCTTTTACATTGCTTGTGTATTGAATTCAACATTATGCACTAAGATGAATTTAAAACTAATTAAGGTTATTCTTATATATTCTTATATTAGTTTTTTTTTATTATGATTTTGTATTTGTAATCCGACTTATTTTAATATGATATCATTTTTATATTATATATTTTTTTCTATTATAGTATTTTTTTTCATATAGGATAACATAACTTTAATATAATATAATTTTTATTTTTTAAAATTTTATTTCTATTATTATTATATAATAATGTAATATATACTTTTTGTAATAATATATTTTATTTAATTGATGCGATAGTTATTGATGAAATTTTATAACAACTCTTTTTTCCTCTAAATTTGGCATACAATTATTGCTAGATAATTAATTGACAATAAAAAAATATATATGATACAAAAATACATACAAAGTCAAAATTTCTTTATGAACAATTTTTATGGTCTAAAATATTTCTCATAAATCTTTTTTCTAGTATATAATATAGATAGTATAGATATAGAAACACAAGTTATAAATTAAAGATTACATATATGTTAAGAAAATAAAACAATAAAATAGACGTGAAGTACATCGACCAAGAGGGTTTTTTTTTTTTTTTGACAACATGTGGGGTGGAGATTTGAACATTTAACCTCTTGATCGAGGATACAAGCTTTATGTCAGTTGAACTATGCTCTTGGTTGCCAACCAAGAAGGTTATTTTTTTTAGAAAAATGTAAAAGATTACATACATATAAATTGCCAAACTCTTGATCGTATCTCATTCGAAAAATATTTTATTTGATGGAACTTTACTTTTAAACAATTATAAAAAAAAAACGCAAAAGCGAGCTTAGCTTAGTGGTAATTGACATATACCTTTGACTGAAAGGTCGGAGGTTCGAATCTCTCCACCCCTAAATGCTGATGTACAAAAAAACAAAACAATTATAAATTAAATAAATAACGAACGCATTGCATTTCTAGCATACGCGTTTCCATTATAAGACTTTATTTGATAGTGGTTTATGGTTCATTCTAAAAGTTATGTACGAATGAAATCTAAAGCCAATTTGAAAAACAAAATGTCCCTTTTCAAATGACGTAATAATCAAAATATTATTTTTTTAAAAAATAATCAATAACCATTGTTTTTTAAATTAAGCTTAAAAACACCACTTTCATCTATAAGTTTTTTAGTTTTTTTTTTTTTTTGAAAAATAATACCTCATATTATAACGCCACTTGGGCTAAAAATGAACGGTCATACTCGACCCACATACACAACCAGTTTGAGTTTCTTAGTTTTGTTAACTACATTCTTTCCAAAAAGCATTCTGTTTTCGTCAGTCCTTTCTCCGACGTAATCATCGGTGATCTCACCGGATTGTTCGCCATCAGTCTCACTGGTGGTGTGTCTTCGCCGGATCTCTCCCTAGAACGAGCCAGAGTTTCTTTATTGCTAAGGTTCTCGAAGATTTCTTTCTGGAGGGAGATTTACGAAGATTTCTATCCCATTGGTGGAAGATTCGTCTCACAGTGGTGATCTCTAGTTAGCTGTGCCCTTTATTTTTCTATGATAGCCTAGTCTGAATTTATTTTCAGAAGATTTTGTTTGATCTCCTTGCTGTGGTGTGCTGATTTGGAGCTCGATTTAGGGCTCGATTTGGGTTTATTTTCTCTTCTTGCTGATTGTGATGTTTTAATTGTCTGGATATGCTGCTGTGTTTAAATTCCATCGTTTGTTCTCGTTTAATCTCAATTCATAGCTTTGGGTTTTCTTGCAAATTTTTTCTTCTCTCACCCTCCTTCTTGCAAATTTTTTCTTCTCTCACCCTCCTTCTTGCAAATTTGTGTTGTTGTATCTCCAATGGCTTTTGCGGAATTATTTGATAATTGGGAAAAATTTAATCTCACTATCGAAGAGGAGGTAACAGAGGTGGATGTTGACCGTCACGTTGTTGCCGTAACTAGCAAATCCCTAGGATTTAGCCTTATTGGTAAACTTCTTTCACCGAGGGTTATATCTGGTGAAGTTATGCAAAAGAACTTCAAGGCGGCCTGAAGAATTCCAACCGAGCTTACGGTCGAAAAACTAGGTGTCAATTTGTCCTTATTTTCCCTGAAGTCGAAGGAGGAGCATACCTGTGGCTTTTCGATAAGTTCTTACTGGTGCTTTCCAAACCAATTCCCATGGTGAAGGCTCAAGCAATGGAATTCAAAATGGTCACGTTCTGGGTCCATTTCTACGAGCTTCCCATGGATTTATATAACTCTTCCATGGCAGAACGTCTTGGGAATGCAGTGGGCAAATTCGTGGACTATGACAATGGTGGGAGGCGACATGGCTGGAAGGAAAGCATTCGAGTTCGTGTCCAGCTCGATATTTCAAAACCTCTCCGGCGAGGAATTAAGGTTAAGCTTGATGAACCTATGGGAAGTTGTTGGTCCCCGATTCGATATGAGAAACTCCCGGAGCTGTGTTCTTTTTGTGGTATCATCGGTCATACGACTCAAAACTGCAGTTCATTCTATATGGACAGTGGCTCATCCTCTCAACGACATCAATATGGTATGTGGTTACAATATACGGGACGCACGACAAGTTTCTTCCGTTGTCCAAGCACGAGTCCAATGGGGCAAAACAAGATCATGACTGATATTCAGGAGGGTGACAATTGTTCTCAAGAGCCGGCCACTGGTATGATTCCTCCGAAATTAGATGGGTCGGTTAGCGACGAGATGGATTCTCAGACGCATGATTCCGGCAGCAAGCCGATGGAAATCTCGTCGGAGATTGAAGAGGAGGTTACTTTTCCATTAATGTCGATTAAACTGAATGGTAATGAGGGCATTAATAGCGGCGTAACTGCTGATTCATCAAGGGCTAAGAAAAAGCTTGATTTGCAAACGTTACGATTTCTCCGTCAACTGCTCTGA

mRNA sequence

ATGCACAATGATTACTATGACTTTGAAGAAGAATTGCCCTTGAAATGGGAACTCAAAGTGTTGTCTTATGATGAATATTTTGTTAACTACATTCTTTCCAAAAAGCATTCTGTTTTCGTCAGTCCTTTCTCCGACGTAATCATCGGTGATCTCACCGGATTGTTCGCCATCAGTCTCACTGGTGGTGTGTCTTCGCCGGATCTCTCCCTAGAACGAGCCAGAGTTTCTTTATTGCTAAGTTATGCAAAAGAACTTCAAGGCGGCCTGAAGAATTCCAACCGAGCTTACGGTCGAAAAACTAGGTGTCAATTTGTCCTTATTTTCCCTGAAGTCGAAGGAGGAGCATACCTGTGGCTTTTCGATAAGTTCTTACTGGTGCTTTCCAAACCAATTCCCATGGTGAAGGCTCAAGCAATGGAATTCAAAATGGTCACGTTCTGGGTCCATTTCTACGAGCTTCCCATGGATTTATATAACTCTTCCATGGCAGAACGTCTTGGGAATGCAGTGGGCAAATTCGTGGACTATGACAATGGTGGGAGGCGACATGGCTGGAAGGAAAGCATTCGAGTTCGTGTCCAGCTCGATATTTCAAAACCTCTCCGGCGAGGAATTAAGGTTAAGCTTGATGAACCTATGGGAAGTTGTTGGTCCCCGATTCGATATGAGAAACTCCCGGAGCTGTGTTCTTTTTGTGGTATCATCGGTCATACGACTCAAAACTGCAGTTCATTCTATATGGACAGTGGCTCATCCTCTCAACGACATCAATATGGTATGTGGTTACAATATACGGGACGCACGACAAGTTTCTTCCGTTGTCCAAGCACGAGTCCAATGGGGCAAAACAAGATCATGACTGATATTCAGGAGGGTGACAATTGTTCTCAAGAGCCGGCCACTGGTATGATTCCTCCGAAATTAGATGGGTCGGTTAGCGACGAGATGGATTCTCAGACGCATGATTCCGGCAGCAAGCCGATGGAAATCTCGTCGGAGATTGAAGAGGAGGTTACTTTTCCATTAATGTCGATTAAACTGAATGGTAATGAGGGCATTAATAGCGGCGTAACTGCTGATTCATCAAGGGCTAAGAAAAAGCTTGATTTGCAAACGTTACGATTTCTCCGTCAACTGCTCTGA

Coding sequence (CDS)

ATGCACAATGATTACTATGACTTTGAAGAAGAATTGCCCTTGAAATGGGAACTCAAAGTGTTGTCTTATGATGAATATTTTGTTAACTACATTCTTTCCAAAAAGCATTCTGTTTTCGTCAGTCCTTTCTCCGACGTAATCATCGGTGATCTCACCGGATTGTTCGCCATCAGTCTCACTGGTGGTGTGTCTTCGCCGGATCTCTCCCTAGAACGAGCCAGAGTTTCTTTATTGCTAAGTTATGCAAAAGAACTTCAAGGCGGCCTGAAGAATTCCAACCGAGCTTACGGTCGAAAAACTAGGTGTCAATTTGTCCTTATTTTCCCTGAAGTCGAAGGAGGAGCATACCTGTGGCTTTTCGATAAGTTCTTACTGGTGCTTTCCAAACCAATTCCCATGGTGAAGGCTCAAGCAATGGAATTCAAAATGGTCACGTTCTGGGTCCATTTCTACGAGCTTCCCATGGATTTATATAACTCTTCCATGGCAGAACGTCTTGGGAATGCAGTGGGCAAATTCGTGGACTATGACAATGGTGGGAGGCGACATGGCTGGAAGGAAAGCATTCGAGTTCGTGTCCAGCTCGATATTTCAAAACCTCTCCGGCGAGGAATTAAGGTTAAGCTTGATGAACCTATGGGAAGTTGTTGGTCCCCGATTCGATATGAGAAACTCCCGGAGCTGTGTTCTTTTTGTGGTATCATCGGTCATACGACTCAAAACTGCAGTTCATTCTATATGGACAGTGGCTCATCCTCTCAACGACATCAATATGGTATGTGGTTACAATATACGGGACGCACGACAAGTTTCTTCCGTTGTCCAAGCACGAGTCCAATGGGGCAAAACAAGATCATGACTGATATTCAGGAGGGTGACAATTGTTCTCAAGAGCCGGCCACTGGTATGATTCCTCCGAAATTAGATGGGTCGGTTAGCGACGAGATGGATTCTCAGACGCATGATTCCGGCAGCAAGCCGATGGAAATCTCGTCGGAGATTGAAGAGGAGGTTACTTTTCCATTAATGTCGATTAAACTGAATGGTAATGAGGGCATTAATAGCGGCGTAACTGCTGATTCATCAAGGGCTAAGAAAAAGCTTGATTTGCAAACGTTACGATTTCTCCGTCAACTGCTCTGA

Protein sequence

MHNDYYDFEEELPLKWELKVLSYDEYFVNYILSKKHSVFVSPFSDVIIGDLTGLFAISLTGGVSSPDLSLERARVSLLLSYAKELQGGLKNSNRAYGRKTRCQFVLIFPEVEGGAYLWLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYDNGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELCSFCGIIGHTTQNCSSFYMDSGSSSQRHQYGMWLQYTGRTTSFFRCPSTSPMGQNKIMTDIQEGDNCSQEPATGMIPPKLDGSVSDEMDSQTHDSGSKPMEISSEIEEEVTFPLMSIKLNGNEGINSGVTADSSRAKKKLDLQTLRFLRQLL
Homology
BLAST of Lcy07g000850 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-38
Identity = 73/150 (48.67%), Postives = 101/150 (67.33%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FDK L+VL KP        +EF  V FW+H ++LPM   N +MA RLGNA+G FVD D
Sbjct: 100 WFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVD 159

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELCSFCGIIGH 237
              +   W  S+R+RV +DI+KPLRRGIK+ +D PMG CW PI+YE+LP+ C FCG+IGH
Sbjct: 160 CNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGH 219

Query: 238 TTQNCSSFYMDSGSSSQ-RHQYGMWLQYTG 267
           ++ +C + Y+ +   S+   +YG WL++ G
Sbjct: 220 SSHDCDARYLAAQDDSRATSEYGPWLRFVG 249

BLAST of Lcy07g000850 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.9e-32
Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FD+ L+++  P+ + K   M+F+ V+ WVHF++L +   N +MA RLGNA+G F D +
Sbjct: 101 WTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE 160

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELCSFCGIIGH 237
           +      W   +RVRV+ D+ KPL RGIK+ LD PMG CW PI+YE+LP+    CG + H
Sbjct: 161 SNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDH 220

Query: 238 TTQNCSSFYMDSGSSSQRHQYGMWLQYTGRTTS 271
             ++CS   +D  S S+  QYG WL++ G   S
Sbjct: 221 ILKDCSDCCVD--SVSKNLQYGPWLRFQGHKNS 251

BLAST of Lcy07g000850 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 86/259 (33.20%), Postives = 127/259 (49.03%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FD+ L++++KP+ ++    ++F  +  WV F++LP+      MA RLGNA+G F + D
Sbjct: 101 WTFDRTLVLINKPVALIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEAD 160

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELCSFCGIIGH 237
                  W  ++RVRV LDISKPLRRGIK+ LD P+G  W PI+YE+LP+ C  CG+   
Sbjct: 161 CDDLNPDWGSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL--- 220

Query: 238 TTQNCSSFYMDSGSSSQRHQYGMWLQYTGR---TTSFFRCP---------------STSP 297
                        SS ++HQYG WL+Y G    T    + P               STSP
Sbjct: 221 ------------SSSRKKHQYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSP 280

Query: 298 MGQNKIMTDIQEGDNCSQEPATGMIPPKLDGSVSD--EMDSQTHDSGSKPMEISSEIEEE 357
           +G                 PATG I   ++  V++  +  ++    G  P+ I  E E+ 
Sbjct: 281 VGAG--------SQGVQSAPATGPIAIPMESPVTETPKKGAEPSQQGKSPVLI-DEGEQR 332

BLAST of Lcy07g000850 vs. ExPASy TrEMBL
Match: A0A7J9LNH4 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_017260 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-22
Identity = 75/221 (33.94%), Postives = 104/221 (47.06%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FDK L VL    P    +  +F +V FW+ FY LP+   N   A  LG AVG+ +  D
Sbjct: 98  WSFDKMLFVLKDYEPSFSPRDYDFSLVPFWIRFYNLPLGWVNRLAALMLGGAVGEVMAID 157

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSP-----IRYEKLPELCSFC 237
              R  GW E IRVRV LDI+KPLRR +K      MGS   P     ++YE+LP  C  C
Sbjct: 158 WRDREGGWGEYIRVRVWLDITKPLRRVVK------MGSQTGPLKVAMVKYERLPNFCYGC 217

Query: 238 GIIGHTTQNCSSFYMDSGSSSQRHQYGMWLQYTGRTTSFFRCPSTSPMGQNKIMTDIQ-- 297
            +IGH+ + C +  +  G      Q+G WL+         R   T     ++ +  ++  
Sbjct: 218 ELIGHSVEACKTVKLTEGMEEADLQFGEWLRVPLPKRPRQRPSKTGKSASHRGIEVVEGA 277

Query: 298 --EGDNCSQEPATGMIPPKLDGSVSDEMDSQTHDSGSKPME 330
             +G + S+ PA G     L   V  E   ++ D GS   E
Sbjct: 278 KGDGSSSSKGPANGTRVNALKFEVGVESQVKSDDKGSSSFE 312

BLAST of Lcy07g000850 vs. ExPASy TrEMBL
Match: A0A7J9GYI0 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_012944 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-22
Identity = 77/221 (34.84%), Postives = 103/221 (46.61%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FDK L VL    P    +  +F +V FW+ FY +P+   N   A  LG AVG+ +  D
Sbjct: 40  WSFDKMLFVLKDYEPSFSPRDYDFSLVPFWIRFYSVPLGWMNWLAALMLGGAVGEVMAID 99

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSP-----IRYEKLPELCSFC 237
              R  GW E IRVRV LDI+KPLRR +K      MGS   P     ++YE+LP  C  C
Sbjct: 100 WRDREGGWGEYIRVRVWLDITKPLRRVVK------MGSQTGPLKVAMVKYERLPNFCYGC 159

Query: 238 GIIGHTTQNCSSFYMDSGSSSQRHQYGMWLQY----TGRTTSFFRCPSTSPMGQNKIMTD 297
            +IGH+ + C +  +  G      Q+G WL+       R     R  S S  G   +   
Sbjct: 160 ELIGHSVEACKTVKLTEGMEEADLQFGEWLRVPLPKRPRQRPSKRGKSASHRGIEVVEGA 219

Query: 298 IQEGDNCSQEPATGMIPPKLDGSVSDEMDSQTHDSGSKPME 330
             +G + S+ PA G     L   V  E   ++ D GS   E
Sbjct: 220 KGDGSSSSKGPANGTRVNALKFEVGVESQVKSDDKGSSSFE 254

BLAST of Lcy07g000850 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 170.6 bits (431), Expect = 2.6e-38
Identity = 73/150 (48.67%), Postives = 101/150 (67.33%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FDK L+VL KP        +EF  V FW+H ++LPM   N +MA RLGNA+G FVD D
Sbjct: 100 WFFDKALIVLQKPCSSKNISELEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVD 159

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELCSFCGIIGH 237
              +   W  S+R+RV +DI+KPLRRGIK+ +D PMG CW PI+YE+LP+ C FCG+IGH
Sbjct: 160 CNEKGFSWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGH 219

Query: 238 TTQNCSSFYMDSGSSSQ-RHQYGMWLQYTG 267
           ++ +C + Y+ +   S+   +YG WL++ G
Sbjct: 220 SSHDCDARYLAAQDDSRATSEYGPWLRFVG 249

BLAST of Lcy07g000850 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 149.1 bits (375), Expect = 8.0e-32
Identity = 66/153 (43.14%), Postives = 96/153 (62.75%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FD+ L+++  P+ + K   M+F+ V+ WVHF++L +   N +MA RLGNA+G F D +
Sbjct: 101 WTFDRALIIIDNPVSLTKPLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVE 160

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELCSFCGIIGH 237
           +      W   +RVRV+ D+ KPL RGIK+ LD PMG CW PI+YE+LP+    CG + H
Sbjct: 161 SNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDH 220

Query: 238 TTQNCSSFYMDSGSSSQRHQYGMWLQYTGRTTS 271
             ++CS   +D  S S+  QYG WL++ G   S
Sbjct: 221 ILKDCSDCCVD--SVSKNLQYGPWLRFQGHKNS 251

BLAST of Lcy07g000850 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 5.3e-28
Identity = 86/259 (33.20%), Postives = 127/259 (49.03%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FD+ L++++KP+ ++    ++F  +  WV F++LP+      MA RLGNA+G F + D
Sbjct: 101 WTFDRTLVLINKPVALIPPSELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEAD 160

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELCSFCGIIGH 237
                  W  ++RVRV LDISKPLRRGIK+ LD P+G  W PI+YE+LP+ C  CG+   
Sbjct: 161 CDDLNPDWGSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL--- 220

Query: 238 TTQNCSSFYMDSGSSSQRHQYGMWLQYTGR---TTSFFRCP---------------STSP 297
                        SS ++HQYG WL+Y G    T    + P               STSP
Sbjct: 221 ------------SSSRKKHQYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSP 280

Query: 298 MGQNKIMTDIQEGDNCSQEPATGMIPPKLDGSVSD--EMDSQTHDSGSKPMEISSEIEEE 357
           +G                 PATG I   ++  V++  +  ++    G  P+ I  E E+ 
Sbjct: 281 VGAG--------SQGVQSAPATGPIAIPMESPVTETPKKGAEPSQQGKSPVLI-DEGEQR 332

BLAST of Lcy07g000850 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 119.0 bits (297), Expect = 8.8e-23
Identity = 62/149 (41.61%), Postives = 86/149 (57.72%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FDK LL+L +  P V+   ++   V FWVH   LP+ L N  + E +GNAVG+F+D D
Sbjct: 98  WTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMD 157

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLD--EPMGSCWSPIRYEKLPELCSFCGII 237
                  W  ++R+RV LD+ KPLRRG+K+ L   EP+   W   +YE+LP  C FCG +
Sbjct: 158 YEDGGIVWGRTMRIRVALDVRKPLRRGMKLALSSAEPI---WVDFKYERLPIYCYFCGRL 217

Query: 238 GHTTQNCSSFYMDS-GSSSQRHQYGMWLQ 264
           GH+ + C      + GS     QYG WL+
Sbjct: 218 GHSERECDDKLSSADGSRVDSLQYGAWLR 243

BLAST of Lcy07g000850 vs. NCBI nr
Match: MBA0860395.1 (hypothetical protein [Gossypium schwendimanii])

HSP 1 Score: 116.7 bits (291), Expect = 4.4e-22
Identity = 75/221 (33.94%), Postives = 104/221 (47.06%), Query Frame = 0

Query: 118 WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNAVGKFVDYD 177
           W FDK L VL    P    +  +F +V FW+ FY LP+   N   A  LG AVG+ +  D
Sbjct: 98  WSFDKMLFVLKDYEPSFSPRDYDFSLVPFWIRFYNLPLGWVNRLAALMLGGAVGEVMAID 157

Query: 178 NGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSP-----IRYEKLPELCSFC 237
              R  GW E IRVRV LDI+KPLRR +K      MGS   P     ++YE+LP  C  C
Sbjct: 158 WRDREGGWGEYIRVRVWLDITKPLRRVVK------MGSQTGPLKVAMVKYERLPNFCYGC 217

Query: 238 GIIGHTTQNCSSFYMDSGSSSQRHQYGMWLQYTGRTTSFFRCPSTSPMGQNKIMTDIQ-- 297
            +IGH+ + C +  +  G      Q+G WL+         R   T     ++ +  ++  
Sbjct: 218 ELIGHSVEACKTVKLTEGMEEADLQFGEWLRVPLPKRPRQRPSKTGKSASHRGIEVVEGA 277

Query: 298 --EGDNCSQEPATGMIPPKLDGSVSDEMDSQTHDSGSKPME 330
             +G + S+ PA G     L   V  E   ++ D GS   E
Sbjct: 278 KGDGSSSSKGPANGTRVNALKFEVGVESQVKSDDKGSSSFE 312

BLAST of Lcy07g000850 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 51.6 bits (122), Expect = 1.6e-06
Identity = 48/193 (24.87%), Postives = 83/193 (43.01%), Query Frame = 0

Query: 57  ISLTGGVSSPDL-SLERARVSLLLSYAKELQGGLKNSNRAYGR--KTRCQFVLIFPEVEG 116
           +SL G + +P   S+ERA + L        Q GL    + +GR    RC  V    E++ 
Sbjct: 37  LSLLGRILNPQTQSVERAILEL------PYQWGL--GTQVHGRILDDRCFQVRFRSEIDL 96

Query: 117 GAYL----WLFDKFLLVLSKPIPMVKAQAMEFKMVTFWVHFYELPMDLYNSSMAERLGNA 176
              L    W+F+++ + L +         + F  +  WVH   +P+   +    E + + 
Sbjct: 97  LNGLRRAPWVFNEWFIALQRWEDFPTEDFLTF--IDVWVHIRGIPLPYVSERTVEIIAST 156

Query: 177 VGKFVDYDNGGRRHGWKESIRVRVQLDISKPLRRGIKVKLDEPMGSCWSPIRYEKLPELC 236
           +G+ V  D           IRV+V++D ++PLR   +V+             YEKL  +C
Sbjct: 157 LGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRF-ASRERAMIGFEYEKLQRVC 216

Query: 237 SFCGIIGHTTQNC 243
           + C  + H   +C
Sbjct: 217 TNCCRVNHQVSHC 218

BLAST of Lcy07g000850 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 23/96 (23.96%), Postives = 44/96 (45.83%), Query Frame = 0

Query: 147 WVHFYELPMDLYNSSMAERLGNAVGKFVDYDNGGRRHGWKESIRVRVQLDISKPLRRGIK 206
           WV    +P + Y+  +   +   +G+ +  D            RV ++++++KPL+  + 
Sbjct: 167 WVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVL 226

Query: 207 VKLDEPMGSCWSPIRYEKLPELCSFCGIIGHTTQNC 243
           +  D         + YE L ++CS CGI GH   +C
Sbjct: 227 INGDRYF------VAYEGLSKICSSCGIYGHLVHSC 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU551.2e-3848.67uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ13.9e-3243.14uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX302.6e-2833.20uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A7J9LNH42.1e-2233.94Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_017260 PE=4... [more]
A0A7J9GYI02.8e-2234.84Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_012944 PE=4 SV... [more]
Match NameE-valueIdentityDescription
XP_022156185.12.6e-3848.67uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.18.0e-3243.14uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.15.3e-2833.20uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028122006.18.8e-2341.61uncharacterized protein LOC114319195 [Camellia sinensis][more]
MBA0860395.14.4e-2233.94hypothetical protein [Gossypium schwendimanii][more]
Match NameE-valueIdentityDescription
AT5G36228.11.6e-0624.87nucleic acid binding;zinc ion binding [more]
AT2G01050.11.8e-0523.96zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 118..193
e-value: 8.7E-13
score: 48.0
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 195..243
e-value: 3.8E-11
score: 42.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..330
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 115..309
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 115..309

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g000850.1Lcy07g000850.1mRNA