Lcy06g023100 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g023100
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibulose bisphosphate carboxylase large chain
LocationChr06: 47883905 .. 47886481 (+)
RNA-Seq ExpressionLcy06g023100
SyntenyLcy06g023100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGCGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGGTAATGAAATTATCCGTGAGGCTAGTAAATGGGGTTTTGAATAATCAGAGTCTATCAGTGTCTATTAATAATATACTTTGATAGATTTTGCTATATTTGCAATTTTTTTTACATTATTCTATATTTGGAATTATATAATTCTTATTTGGCACGTAACGCAAATTCTCTTTTCTTTACTTGAATTCAGCCCATTGGTTTTAGCCCAAGACTGACCAACCCAATTGTCTTTCCTTTTTATTCGATTCAATCCATTCTTTTTCTTTTTTTTTAAGAATTTTTCAGAAATATTCAAACCCTAATCTTAAATTTTAATTCTAAACCAAACATATGTGTCTGCCCATCAGATCAGTGATCTGCCTCTCTGTTTTCTCCCCACTTTCTTCATCAAACTTTCATCATTTCCGACGCCACGCTGTGGAATTTCCATTTTACTTTTCCTCTCTCGTCTGATCTCCTAATTTCAAGGTTAGTAATTTTTCTTCTCGAAGTTTTTTTTTTTTTTTTGAATAATTTTTTTTTGGTAGTTTCGATTAATTTCAAGGTTAGTATTAAAAATTAAAAAAAAATGATGAATGATGAGAGACGGAGGGAGTGGCGGAGGTCCTGGCCATGGCGGTCGGAAAAGAAGGAGGTGTGACATGGAAGATAGAAAGAAGGATCTATAGAAGAAAAAGTCAAAGAATAAGGTGGGCCCCTGAAGTTAGAGAGAAATATGATTTATTTTCGTCTTTTTTTTTCGAAATGGTTAAATATTTATTTTATTTTTTTTTAGAATAATTAAGACCCGGTTTGATAACCATTTCGTTTTTTTTTTTTTTTTTGGTTTTTGAAAATTGTGTTTGTTTTCTCTCCATCTTCTTATAATAGTTTTCATTTTTGTCAGGAGACATTTGAGTTTCTAGCCAAATTCCAAAAACAAAATCAAGTTTTTGAAAACTACTTCTTTTTTTTTCAAAATTTTGCTTGGTTTTTGAAAACATAGGTAAGGATGTAGATAAAAAAAAAAAAGAAGCTTGTGGGTAAAAATAGTATTTATAGGCTTAATTTTCAAAAACTAAAAACAAAAAACGAAATGGTTATCAAATAGAGCTTAAATATTTAGTTTGGAACTTTTAGATTTGTGTTTATTTAATTCTTGAATTTTAAGAATGAAAAAAATAACCGTGAATTTTAAAAAGTATGCTAAGTCTTTGAAGTTTTAATTTTGTATATTGTAGATTCAACTTTAAAAATATTTAATTGAAACTTTCAATTTTAAGTGAGATGGGCCATTCACACATTTGAAAATTTTAAAATCAATCCATCTGTTAGACTATTTTTATGTTGATAGACCATTTATACTTCTTAGTATTAAAAAATCATTTTTATCTGCCATTCAAGTTTTTTTTAGCAAGTGACTCTTCAATTTGTGAATTATGGACTTTGTTTCTATTTGATTCAAAAACAACTTCTTTTTTTTGTCCTTAAGGTTTGGTTTTGGACTTTACAAAAAGAAAAAAAAAAGTTTGGTTTTGGATTCTATTTGATATGTGAGTTGAATTAATGAAAGGATAACATGTGATAGTTAACTCAACTCGATGAAAAAATGGAGTGAAGTCTCATTAAGGTCCCATTTGATAATCATTTTGTTTTTTGTTTTTTATTTTTTAAAATTAAGTTTATAAACATTACTTCCACCTACAAATTTCTTTGTTTTTCTAATACCTTCCTTCCATGTTTTCAAAAACCAAGCCAATTTTTAAAACTAAAACAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTGGAATTTGGTTAGAAATTCAAATATGTCATTGACAAAGATGAAAACCATGATAAGAAAATTGGAAGAAATCAAACATAATTTTCAAAAATAAAAAACCAAATGATTATCAAACTCGTAAATGTGTAACTTTCAGAAATTTAATTCAAGGTTTGTTTTTTTTTTCCTTCTTTAAATTGCCATAAATTATATATACTTCATTGTGAAAGTTGCAATGATCAATTTCATATTAGTTAAATCATTATAACATTAAGCAAACCGAAATTGAAAAATAAAAAGAAAATTCTATAACATTTCATTTGAGAATATTTCCAATACTAAATCCATTGACAAAAGAAAACAACAAAAGACCATTCTAGTGGAAGTGAAAATAAGTACTAAGATGTTTTCTTGAATTTAAATTTGCTTCCATTATCACTCCAATTTTGTCTCATTTTGCTTCTCTTTATGACTGTTTTTAGATTATAGAAAACATAATCCCCTTCCCATCTCAATTATTGAATTTTGTGACTTACCTATCCTACAATGGCTGTATTTAACTTGTATTTATATTTATTTGTCTATAGCTATTGGTTCCACATGCAAAGATTCCAAACAAATGAATAAGAATTTCTTGGAAGTCAAAGTGGTGTAG

mRNA sequence

ATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGCGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGCTATTGGTTCCACATGCAAAGATTCCAAACAAATGAATAAGAATTTCTTGGAAGTCAAAGTGGTGTAG

Coding sequence (CDS)

ATGCCTGCTCTAACCGAGATTTTTGGAGATGATTCTGTACTACAATTCGGCGGAGGAACTTTGGGGCACCCTTGGGGTAATGCACCTGGTGCCGTAGCTAACCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCTCGTGAGGCTATTGGTTCCACATGCAAAGATTCCAAACAAATGAATAAGAATTTCTTGGAAGTCAAAGTGGTGTAG

Protein sequence

MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREAIGSTCKDSKQMNKNFLEVKVV
Homology
[Close]
BLAST of Lcy06g023100 vs. ExPASy Swiss-Prot
Match: P28439 (Ribulose bisphosphate carboxylase large chain OS=Pelargonium hortorum OX=4031 GN=rbcL-A PE=3 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 5.1e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREA---IG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIR 446

Query: 61  STCKDSKQM 67
             CK S+++
Sbjct: 447 KACKWSREL 455

[Close]
BLAST of Lcy06g023100 vs. ExPASy Swiss-Prot
Match: A9LYA9 (Ribulose bisphosphate carboxylase large chain OS=Acorus americanus OX=263995 GN=rbcL PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.8e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREA---IG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE+   I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARESTQIIR 446

Query: 61  STCKDSKQM 67
             CK S ++
Sbjct: 447 EACKWSPEL 455

[Close]
BLAST of Lcy06g023100 vs. ExPASy Swiss-Prot
Match: Q3V526 (Ribulose bisphosphate carboxylase large chain OS=Acorus calamus OX=4465 GN=rbcL PE=3 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 8.8e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREA---IG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE+   I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARESTQIIR 446

Query: 61  STCKDSKQM 67
             CK S ++
Sbjct: 447 EACKWSPEL 455

[Close]
BLAST of Lcy06g023100 vs. ExPASy Swiss-Prot
Match: O20241 (Ribulose bisphosphate carboxylase large chain OS=Nandina domestica OX=41776 GN=rbcL PE=3 SV=3)

HSP 1 Score: 117.1 bits (292), Expect = 8.8e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREA---IG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIR 446

Query: 61  STCKDSKQM 67
           + CK S ++
Sbjct: 447 AACKWSPEL 455

[Close]
BLAST of Lcy06g023100 vs. ExPASy Swiss-Prot
Match: P19163 (Ribulose bisphosphate carboxylase large chain OS=Neurachne munroi OX=4524 GN=rbcL PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.8e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREA---IG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIK 446

Query: 61  STCKDSKQM 67
           + CK S ++
Sbjct: 447 AACKWSPEL 455

[Close]
BLAST of Lcy06g023100 vs. ExPASy TrEMBL
Match: I6NM69 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria austinensis OX=1052903 GN=rbcL PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 377 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 436

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 437 QACKWSDELN 446

[Close]
BLAST of Lcy06g023100 vs. ExPASy TrEMBL
Match: I6NQA3 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria australis OX=1129416 GN=rbcL PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 377 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 436

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 437 QACKWSDELN 446

[Close]
BLAST of Lcy06g023100 vs. ExPASy TrEMBL
Match: I6NM70 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria australis OX=1129416 GN=rbcL PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 377 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 436

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 437 QACKWSDELN 446

[Close]
BLAST of Lcy06g023100 vs. ExPASy TrEMBL
Match: A0A678V3J4 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria australis OX=1129416 GN=rbcl PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 377 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 436

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 437 QACKWSDELN 446

[Close]
BLAST of Lcy06g023100 vs. ExPASy TrEMBL
Match: I6NM73 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria submersa OX=178428 GN=rbcL PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 377 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 436

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 437 QACKWSDELN 446

[Close]
BLAST of Lcy06g023100 vs. NCBI nr
Match: AHB38662.1 (ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit [Trithuria filamentosa])

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-23
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 446

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 447 QACKWSDELN 456

[Close]
BLAST of Lcy06g023100 vs. NCBI nr
Match: AAF97658.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Ismene longipetala])

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-23
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREA---IG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE+   I 
Sbjct: 375 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARESNEIIR 434

Query: 61  STCKDSKQM 67
            TCK S ++
Sbjct: 435 ETCKWSPEL 443

[Close]
BLAST of Lcy06g023100 vs. NCBI nr
Match: AEX31454.1 (1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria austinensis] >AEX31461.1 1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria australis] >AEX31475.1 1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria submersa] >AEX31456.1 1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria austinensis] >AEX31457.1 1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria austinensis])

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-23
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 377 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 436

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 437 QACKWSDELN 446

[Close]
BLAST of Lcy06g023100 vs. NCBI nr
Match: AXP32238.1 (ribulose-15-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria australis] >AXP32246.1 ribulose-15-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria australis] >AXP32247.1 ribulose-15-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria australis] >AXP32248.1 ribulose-15-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria australis] >AXP32249.1 ribulose-15-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria australis])

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-23
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 377 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 436

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 437 QACKWSDELN 446

[Close]
BLAST of Lcy06g023100 vs. NCBI nr
Match: YP_007476359.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trithuria inconspicua] >QHO62386.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trithuria inconspicua subsp. brevistyla] >CCJ32525.1 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trithuria inconspicua])

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-23
Identity = 59/70 (84.29%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE---AIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLARE    I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNDVIR 446

Query: 61  STCKDSKQMN 68
             CK S ++N
Sbjct: 447 QACKWSDELN 456

[Close]
BLAST of Lcy06g023100 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 114.4 bits (285), Expect = 4.0e-26
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 1   MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLA---REAIG 60
           MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLA    E I 
Sbjct: 387 MPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAVEGNEIIR 446

Query: 61  STCKDSKQM 67
             CK S ++
Sbjct: 447 EACKWSPEL 455

The following BLAST results are available for this feature:
BLAST of Lcy06g023100 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P284395.1e-2684.06Ribulose bisphosphate carboxylase large chain OS=Pelargonium hortorum OX=4031 GN... [more]
A9LYA98.8e-2684.06Ribulose bisphosphate carboxylase large chain OS=Acorus americanus OX=263995 GN=... [more]
Q3V5268.8e-2684.06Ribulose bisphosphate carboxylase large chain OS=Acorus calamus OX=4465 GN=rbcL ... [more]
O202418.8e-2684.06Ribulose bisphosphate carboxylase large chain OS=Nandina domestica OX=41776 GN=r... [more]
P191638.8e-2684.06Ribulose bisphosphate carboxylase large chain OS=Neurachne munroi OX=4524 GN=rbc... [more]
BLAST of Lcy06g023100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
I6NM698.5e-2484.29Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria austinensi... [more]
I6NQA38.5e-2484.29Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria australis ... [more]
I6NM708.5e-2484.29Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria australis ... [more]
A0A678V3J48.5e-2484.29Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria australis ... [more]
I6NM738.5e-2484.29Ribulose bisphosphate carboxylase large chain (Fragment) OS=Trithuria submersa O... [more]
BLAST of Lcy06g023100 vs. NCBI nr
Match NameE-valueIdentityDescription
AHB38662.11.8e-2384.29ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit [Trithuria filamen... [more]
AAF97658.11.8e-2385.51ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Ismene l... [more]
AEX31454.11.8e-2384.291,5-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria austine... [more]
AXP32238.11.8e-2384.29ribulose-15-bisphosphate carboxylase/oxygenase large subunit, partial [Trithuria... [more]
YP_007476359.11.8e-2384.29ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trithuria inconsp... [more]
BLAST of Lcy06g023100 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00490.14.0e-2682.61ribulose-bisphosphate carboxylases [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalPFAMPF00016RuBisCO_largecoord: 1..68
e-value: 1.6E-15
score: 57.1
IPR036376Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamilyGENE3D3.20.20.110coord: 1..75
e-value: 9.0E-21
score: 76.0
IPR036376Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamilySUPERFAMILY51649RuBisCo, C-terminal domaincoord: 1..55
NoneNo IPR availablePANTHERPTHR47910RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN, CATALYTIC DOMAIN-CONTAINING PROTEINcoord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g023100.1Lcy06g023100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009853 photorespiration
biological_process GO:0019253 reductive pentose-phosphate cycle
cellular_component GO:0009507 chloroplast
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity