Lcy06g022770 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g022770
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Copper transporter
Location	Chr06: 47547431 .. 47547883 (-)
RNA-Seq Expression	Lcy06g022770
Synteny	Lcy06g022770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGAAAACGACGTCACATCATAACCTCGGCGCTGTCCCGCCACCGGCGCCGGAGACCAATGCCGGGAAGACGGTGGTGCACAAGTCATTATACTGGGGGCACGAGGCGCAAGTCCTGTTCACCGGGTGGCCCGGTGCGAACTCCGGCATGTACGCATTGGCGGTGATCTTGGTCTTCGTGTTGGCGATGCTGGTGGAATGGCTTACTTATTTAAACTTGATGAAGGAAAGCGCGGACGATGTGTGGACGGTGGTGCTGCAGACGGCGATACACGCAGTACGTACTGGGTTGAGTTACATGGTGATGCTATCGGTGATGTCGTTCAACGGCGGGATCTTCCTGGCTGCGGTGGGTGGGCACGCTGTGGGGTTCGTTCTGTTCAGAGCCCGAGCCAAACAAAAGAGCGAGTCAGATTCGCGGAAGCCCAATGGTCCAATGACATTCTGA

mRNA sequence

ATGGCTCTGAAAACGACGTCACATCATAACCTCGGCGCTGTCCCGCCACCGGCGCCGGAGACCAATGCCGGGAAGACGGTGGTGCACAAGTCATTATACTGGGGGCACGAGGCGCAAGTCCTGTTCACCGGGTGGCCCGGTGCGAACTCCGGCATGTACGCATTGGCGGTGATCTTGGTCTTCGTGTTGGCGATGCTGGTGGAATGGCTTACTTATTTAAACTTGATGAAGGAAAGCGCGGACGATGTGTGGACGGTGGTGCTGCAGACGGCGATACACGCAGTACGTACTGGGTTGAGTTACATGGTGATGCTATCGGTGATGTCGTTCAACGGCGGGATCTTCCTGGCTGCGGTGGGTGGGCACGCTGTGGGGTTCGTTCTGTTCAGAGCCCGAGCCAAACAAAAGAGCGAGTCAGATTCGCGGAAGCCCAATGGTCCAATGACATTCTGA

Coding sequence (CDS)

ATGGCTCTGAAAACGACGTCACATCATAACCTCGGCGCTGTCCCGCCACCGGCGCCGGAGACCAATGCCGGGAAGACGGTGGTGCACAAGTCATTATACTGGGGGCACGAGGCGCAAGTCCTGTTCACCGGGTGGCCCGGTGCGAACTCCGGCATGTACGCATTGGCGGTGATCTTGGTCTTCGTGTTGGCGATGCTGGTGGAATGGCTTACTTATTTAAACTTGATGAAGGAAAGCGCGGACGATGTGTGGACGGTGGTGCTGCAGACGGCGATACACGCAGTACGTACTGGGTTGAGTTACATGGTGATGCTATCGGTGATGTCGTTCAACGGCGGGATCTTCCTGGCTGCGGTGGGTGGGCACGCTGTGGGGTTCGTTCTGTTCAGAGCCCGAGCCAAACAAAAGAGCGAGTCAGATTCGCGGAAGCCCAATGGTCCAATGACATTCTGA

Protein sequence

MALKTTSHHNLGAVPPPAPETNAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKQKSESDSRKPNGPMTF

Homology

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BLAST of Lcy06g022770 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-27
Identity = 61/124 (49.19%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 25  KTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAMLVEWLTYLNLMKESADDV- 84
           K ++H + +WG   +VLF+GWPG +SGMYAL +I VF LA+L EWL + +L++ S  D  
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 85  --WTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKQKSESDS 144
                ++QTA++ +R GL+Y+VML+VMSFN G+FL A+ GHAVGF+LF ++   ++ SD 
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQT-FRNTSDD 158

Query: 145 RKPN 146
           RK N
Sbjct: 159 RKTN 161

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BLAST of Lcy06g022770 vs. ExPASy Swiss-Prot
Match: Q8SAA5 (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-27
Identity = 58/111 (52.25%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 26  TVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAMLVEWL---TYLNLMKESADD 85
           +++H + YWG+  QVLF+GWPG++ GMYALA+I VF LA L EWL   +  + +K+ AD 
Sbjct: 28  SLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADK 87

Query: 86  VWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARA 134
           +  V  +TA++ V++G SY+V+L+V+SFNGG+FLAA+ GHA+GF +FR RA
Sbjct: 88  LAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRA 138

[Close]

BLAST of Lcy06g022770 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-27
Identity = 60/139 (43.17%), Postives = 97/139 (69.78%), Query Frame = 0


Query: 12  GAVPPPAP-----ETNAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAML 71
           G +PP +P      TN+   ++H + +WG   ++LF+GWPG + GMY L +I+VF+LA++
Sbjct: 4   GNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVI 63

Query: 72  VEWLTYLNLMK-ESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVG 131
           VEWL + ++++   +      ++QTA++ ++TGL+Y+VML+VMSFNGG+F+ A+ G AVG
Sbjct: 64  VEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 123

Query: 132 FVLFRARAKQKSESDSRKP 145
           F+LF + A  K+ SD  KP
Sbjct: 124 FMLFGSTA-FKNPSDDEKP 141

[Close]

BLAST of Lcy06g022770 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-26
Identity = 58/143 (40.56%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 8   HHNLGAVPPPAP-------ETNAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILV 67
           H ++  +PPP+P        T     ++H + +WG   +VLF+GWPG +SGMYAL +I++
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 68  FVLAMLVEWLTYLNLMKESADDVWTVVL-QTAIHAVRTGLSYMVMLSVMSFNGGIFLAAV 127
           F+LA++ EWL +  +++ S        L QTA++ ++TGLSY+VML+VMSFN G+F+ A+
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 128 GGHAVGFVLFRARAKQKSESDSR 143
            G+ VGF LF +   +K   D +
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQK 145

[Close]

BLAST of Lcy06g022770 vs. ExPASy Swiss-Prot
Match: Q60EN8 (Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.6e-25
Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 15  PPPAPETNAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAMLVEWLTY-- 74
           PPPAP   A    +H + +WG   +VLFT WPGA  GMYALA++ +F LA+L+E+  Y  
Sbjct: 12  PPPAPVKKA--RYMHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEFRGYRV 71

Query: 75  --LNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFR 132
               L +  A       L+TA+HAVR G++Y++ML++MSFNGG+FLA V GHA GF+ FR
Sbjct: 72  LEARLARRRAPRA-AAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAFR 129

[Close]

BLAST of Lcy06g022770 vs. ExPASy TrEMBL
Match: A0A6J1FMA0 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111447095 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-65
Identity = 131/156 (83.97%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET------NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYA 60
           MALKTTSHHNLGAVPPPA ET      NAGKTVVHK+LYWGH+AQVLFTGWP  NS MYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPSTNSAMYA 61

Query: 61  LAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGI 120
           LAVI VFVLA+ VEWLTYLN MKESAD+V TVVLQTAIHAVRTGL+YMV+LSVMSFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHAVGFVLFRARAKQKSESDSRKPNGPMTF 151
           FLAAVGGHAVGFVLFRARAK+K++SDS KPNGP+TF
Sbjct: 122 FLAAVGGHAVGFVLFRARAKRKAKSDSPKPNGPLTF 157

[Close]

BLAST of Lcy06g022770 vs. ExPASy TrEMBL
Match: A0A6J1I894 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111470087 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.4e-64
Identity = 128/156 (82.05%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET------NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYA 60
           MALKTTSHHNLG VPPPA E+      NAGKTVVHK+LYWGH+AQVLFTGWPG NS MYA
Sbjct: 81  MALKTTSHHNLGGVPPPAVESNPANTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 140

Query: 61  LAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGI 120
           LAVI VFVLA+ VEWLTYLN MK+SAD+V TVVLQ+AIHAVRTGL YMVMLSVMSFNGGI
Sbjct: 141 LAVIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQSAIHAVRTGLKYMVMLSVMSFNGGI 200

Query: 121 FLAAVGGHAVGFVLFRARAKQKSESDSRKPNGPMTF 151
           FLAAVGGHAVGFVLFR RA++K+ESDS KPNGP+TF
Sbjct: 201 FLAAVGGHAVGFVLFRGRAERKAESDSPKPNGPLTF 236

[Close]

BLAST of Lcy06g022770 vs. ExPASy TrEMBL
Match: A0A6J1CV92 (Copper transporter OS=Momordica charantia OX=3673 GN=LOC111015103 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 125/150 (83.33%), Postives = 134/150 (89.33%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET-NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVIL 60
           + LK TS HNLG VPPPA ET NAGKTVVHKSLYW H+AQVLFTGWPGA+S MYALAVI 
Sbjct: 11  LKLKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIF 70

Query: 61  VFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAV 120
           VFVLA+LVEWLTY N MK+SA+ V   VLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAV
Sbjct: 71  VFVLAVLVEWLTYCNFMKQSAESVSKAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAV 130

Query: 121 GGHAVGFVLFRARAKQKSESDSRKPNGPMT 150
           GGHAVGFVLFRARAK+KSESDS KPNGP++
Sbjct: 131 GGHAVGFVLFRARAKRKSESDSTKPNGPIS 160

[Close]

BLAST of Lcy06g022770 vs. ExPASy TrEMBL
Match: A0A5A7TLC7 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001240 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.0e-52
Identity = 107/135 (79.26%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 3   LKTTSHHNLGAVPPPAPETN-AGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVF 62
           +KTTSHHNLGAVPPP+PETN A KT  HKSLYWGH+AQVLFTGWPG NSGMYALAVI VF
Sbjct: 1   MKTTSHHNLGAVPPPSPETNPAEKTGAHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 63  VLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG 122
           VLA++VEWL   N MK++ + VW VV QTAIHAVRTGLSYMVML+VMSFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVWKVVGQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 123 HAVGFVLFRARAKQK 137
           HAVGFVLF+ R ++K
Sbjct: 121 HAVGFVLFKKRGERK 135

[Close]

BLAST of Lcy06g022770 vs. ExPASy TrEMBL
Match: A0A0A0LD01 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_3G733240 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.5e-51
Identity = 106/135 (78.52%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 3   LKTTSHHNLGAVPPPAPETN-AGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVF 62
           +KTTSHHNLGAVPPP+ ETN A K VVHKSLYWGH+AQVLFTGWPG NSGMYALAVI VF
Sbjct: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 63  VLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG 122
           VLA++VEWL   N MK++ + V  VV+QTAIHAVRTGLSYMVML+VMSFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 123 HAVGFVLFRARAKQK 137
           HAVGFVLF+ R ++K
Sbjct: 121 HAVGFVLFKRRGERK 135

[Close]

BLAST of Lcy06g022770 vs. NCBI nr
Match: KAG7027927.1 (Copper transporter 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 131/156 (83.97%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET------NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYA 60
           MALKTTSHHNLGAVPPPA E+      NAGKTVVHK+LYWGH+AQVLFTGWPG NS MYA
Sbjct: 1   MALKTTSHHNLGAVPPPAVESNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 60

Query: 61  LAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGI 120
           LAVI VFVLA+ VEWLTYLN MKESAD+V TVVLQTAIH VRTGL+YMV+LSVMSFNGGI
Sbjct: 61  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHTVRTGLNYMVILSVMSFNGGI 120

Query: 121 FLAAVGGHAVGFVLFRARAKQKSESDSRKPNGPMTF 151
           FLAAVGGHAVGFVLFRARAK+K+ESDS KPNGP+TF
Sbjct: 121 FLAAVGGHAVGFVLFRARAKRKAESDSPKPNGPLTF 156

[Close]

BLAST of Lcy06g022770 vs. NCBI nr
Match: KAG6596378.1 (Copper transporter 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65
Identity = 131/156 (83.97%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET------NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYA 60
           MALKTTSHHNLGAVPPPA E+      NAGKTVVHK+LYWGH+AQVLFTGWPG NS MYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVESNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 61

Query: 61  LAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGI 120
           LAVI VFVLA+ VEWLTYLN MKESAD+V TVVLQTAIH VRTGL+YMV+LSVMSFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHTVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHAVGFVLFRARAKQKSESDSRKPNGPMTF 151
           FLAAVGGHAVGFVLFRARAK+K+ESDS KPNGP+TF
Sbjct: 122 FLAAVGGHAVGFVLFRARAKRKAESDSPKPNGPLTF 157

[Close]

BLAST of Lcy06g022770 vs. NCBI nr
Match: XP_022941866.1 (copper transporter 4-like [Cucurbita moschata])

HSP 1 Score: 258.1 bits (658), Expect = 4.8e-65
Identity = 131/156 (83.97%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET------NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYA 60
           MALKTTSHHNLGAVPPPA ET      NAGKTVVHK+LYWGH+AQVLFTGWP  NS MYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPSTNSAMYA 61

Query: 61  LAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGI 120
           LAVI VFVLA+ VEWLTYLN MKESAD+V TVVLQTAIHAVRTGL+YMV+LSVMSFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHAVGFVLFRARAKQKSESDSRKPNGPMTF 151
           FLAAVGGHAVGFVLFRARAK+K++SDS KPNGP+TF
Sbjct: 122 FLAAVGGHAVGFVLFRARAKRKAKSDSPKPNGPLTF 157

[Close]

BLAST of Lcy06g022770 vs. NCBI nr
Match: XP_022971334.1 (copper transporter 6-like [Cucurbita maxima])

HSP 1 Score: 254.2 bits (648), Expect = 6.9e-64
Identity = 128/156 (82.05%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET------NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYA 60
           MALKTTSHHNLG VPPPA E+      NAGKTVVHK+LYWGH+AQVLFTGWPG NS MYA
Sbjct: 81  MALKTTSHHNLGGVPPPAVESNPANTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 140

Query: 61  LAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGI 120
           LAVI VFVLA+ VEWLTYLN MK+SAD+V TVVLQ+AIHAVRTGL YMVMLSVMSFNGGI
Sbjct: 141 LAVIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQSAIHAVRTGLKYMVMLSVMSFNGGI 200

Query: 121 FLAAVGGHAVGFVLFRARAKQKSESDSRKPNGPMTF 151
           FLAAVGGHAVGFVLFR RA++K+ESDS KPNGP+TF
Sbjct: 201 FLAAVGGHAVGFVLFRGRAERKAESDSPKPNGPLTF 236

[Close]

BLAST of Lcy06g022770 vs. NCBI nr
Match: XP_023540707.1 (copper transporter 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.8 bits (647), Expect = 9.0e-64
Identity = 129/153 (84.31%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 1   MALKTTSHHNLGAVPPPAPET------NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYA 60
           MALKTTSHHNLGAVPPPA ET      NAGKTVVHK+LYWGH+AQVLFTGWPG NS MYA
Sbjct: 2   MALKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYA 61

Query: 61  LAVILVFVLAMLVEWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGI 120
           LAVI VFVLA+ VEWLTYLN MK+SAD+V TVVLQTAIHAVRTGL+YMV+LSVMSFNGGI
Sbjct: 62  LAVIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGI 121

Query: 121 FLAAVGGHAVGFVLFRARAKQKSESDSRKPNGP 148
           FLAAVGGHAVGFVLFRAR K+K+ESDS KPNGP
Sbjct: 122 FLAAVGGHAVGFVLFRARVKRKAESDSPKPNGP 154

[Close]

BLAST of Lcy06g022770 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-28
Identity = 60/139 (43.17%), Postives = 97/139 (69.78%), Query Frame = 0


Query: 12  GAVPPPAP-----ETNAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAML 71
           G +PP +P      TN+   ++H + +WG   ++LF+GWPG + GMY L +I+VF+LA++
Sbjct: 4   GNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVI 63

Query: 72  VEWLTYLNLMK-ESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVG 131
           VEWL + ++++   +      ++QTA++ ++TGL+Y+VML+VMSFNGG+F+ A+ G AVG
Sbjct: 64  VEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVG 123

Query: 132 FVLFRARAKQKSESDSRKP 145
           F+LF + A  K+ SD  KP
Sbjct: 124 FMLFGSTA-FKNPSDDEKP 141

[Close]

BLAST of Lcy06g022770 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-28
Identity = 58/111 (52.25%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 26  TVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAMLVEWL---TYLNLMKESADD 85
           +++H + YWG+  QVLF+GWPG++ GMYALA+I VF LA L EWL   +  + +K+ AD 
Sbjct: 28  SLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADK 87

Query: 86  VWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARA 134
           +  V  +TA++ V++G SY+V+L+V+SFNGG+FLAA+ GHA+GF +FR RA
Sbjct: 88  LAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRA 138

[Close]

BLAST of Lcy06g022770 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-28
Identity = 61/124 (49.19%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 25  KTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAMLVEWLTYLNLMKESADDV- 84
           K ++H + +WG   +VLF+GWPG +SGMYAL +I VF LA+L EWL + +L++ S  D  
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 85  --WTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFVLFRARAKQKSESDS 144
                ++QTA++ +R GL+Y+VML+VMSFN G+FL A+ GHAVGF+LF ++   ++ SD 
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQT-FRNTSDD 158

Query: 145 RKPN 146
           RK N
Sbjct: 159 RKTN 161

[Close]

BLAST of Lcy06g022770 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 58/143 (40.56%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 8   HHNLGAVPPPAP-------ETNAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILV 67
           H ++  +PPP+P        T     ++H + +WG   +VLF+GWPG +SGMYAL +I++
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 68  FVLAMLVEWLTYLNLMKESADDVWTVVL-QTAIHAVRTGLSYMVMLSVMSFNGGIFLAAV 127
           F+LA++ EWL +  +++ S        L QTA++ ++TGLSY+VML+VMSFN G+F+ A+
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 128 GGHAVGFVLFRARAKQKSESDSR 143
            G+ VGF LF +   +K   D +
Sbjct: 123 AGYGVGFFLFGSTTFKKPSDDQK 145

[Close]

BLAST of Lcy06g022770 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 101.7 bits (252), Expect = 5.4e-22
Identity = 52/134 (38.81%), Postives = 84/134 (62.69%), Query Frame = 0


Query: 13  AVPPPAPET-----NAGKTVVHKSLYWGHEAQVLFTGWPGANSGMYALAVILVFVLAMLV 72
           A P P+P +     +    ++H + +WG   +VLF GWPG +  MY + + ++FV++   
Sbjct: 10  AAPAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFS 69

Query: 73  EWLTYLNLMKESADDVWTVVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGGHAVGFV 132
           E L+    MK     +   +LQTA++ VR  LSY+VML+VMSFNGG+F+AA+ G  +GF+
Sbjct: 70  ECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFM 129

Query: 133 LFRARAKQKSESDS 142
           +F +RA + + S+S
Sbjct: 130 IFGSRAFRATSSNS 143

The following BLAST results are available for this feature:

BLAST of Lcy06g022770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39065	4.1e-27	49.19	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q8SAA5	4.1e-27	52.25	Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2	[more]
Q8GWP3	4.1e-27	43.17	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q9STG2	2.0e-26	40.56	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q60EN8	8.6e-25	49.59	Copper transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT2 PE=1 SV=1	[more]

BLAST of Lcy06g022770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMA0	2.3e-65	83.97	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111447095 PE=3 SV=1	[more]
A0A6J1I894	3.4e-64	82.05	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111470087 PE=3 SV=1	[more]
A0A6J1CV92	2.0e-61	83.33	Copper transporter OS=Momordica charantia OX=3673 GN=LOC111015103 PE=3 SV=1	[more]
A0A5A7TLC7	1.0e-52	79.26	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A0A0LD01	2.5e-51	78.52	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_3G733240 PE=3 SV=1	[more]

BLAST of Lcy06g022770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027927.1	2.8e-65	83.97	Copper transporter 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6596378.1	2.8e-65	83.97	Copper transporter 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941866.1	4.8e-65	83.97	copper transporter 4-like [Cucurbita moschata]	[more]
XP_022971334.1	6.9e-64	82.05	copper transporter 6-like [Cucurbita maxima]	[more]
XP_023540707.1	9.0e-64	84.31	copper transporter 4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy06g022770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26975.1	2.9e-28	43.17	Ctr copper transporter family	[more]
AT2G37925.1	2.9e-28	52.25	copper transporter 4	[more]
AT5G59030.1	2.9e-28	49.19	copper transporter 1	[more]
AT3G46900.1	1.5e-27	40.56	copper transporter 2	[more]
AT5G59040.1	5.4e-22	38.81	copper transporter 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 33..75 e-value: 1.5E-6 score: 28.9 coord: 84..129 e-value: 4.9E-12 score: 46.6
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 7..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12483:SF94	COPPER TRANSPORTER 4	coord: 7..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g022770.1	Lcy06g022770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity