Homology
BLAST of Lcy06g021590 vs. ExPASy Swiss-Prot
Match:
Q9LFI1 (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E86 PE=2 SV=1)
HSP 1 Score: 883.2 bits (2281), Expect = 2.1e-255
Identity = 427/738 (57.86%), Postives = 549/738 (74.39%), Query Frame = 0
Query: 51 NTQLAFSSCPV----TEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLI 110
N+Q+ +S V TE+ +D+I SLCK N +REAL+ FD QK S+ ++ TY LI
Sbjct: 15 NSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLI 74
Query: 111 NACSSLRFLEHGRKIHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVV 170
ACSS R L GRKIH H+ N + D IL NHIL+MYGKCGSL++AR VFD MP +N+V
Sbjct: 75 CACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLV 134
Query: 171 SWTSMISGYSHYGQEDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHV 230
S+TS+I+GYS GQ AI LY++ML+ +PD F FGS++K+C+ D L +QLHA V
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 231 LKSEFGGHLIAQNALISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEAL 290
+K E HLIAQNALI+MY + +Q+SDA VF I KDLISW S+IAGFSQLG+E EAL
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 291 YHFREMLSQPVYQPNEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDM 350
H +EMLS V+ PNE+IFGS+ ACS LL P+YG QIHGLCIK L + AGCSLCDM
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314
Query: 351 YAKCGFLGSARTVFYQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTV 410
YA+CGFL SAR VF QIE+PD +WN IIAG A+ E++S FSQMR +G P+ +++
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 411 LSLLCACSEPVMLYQGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGN 470
SLLCA ++P+ L QGMQ+HSYIIK F ++ VCNSLL+MY+ CS+L +FED N
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 471 KADIVSWNTMLTACLQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQ 530
AD VSWNT+LTACLQ Q E+LRL K ML S PDH+T+ N+L +I+S ++GSQ
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494
Query: 531 VHCFIMKSGLNLDTSVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGC 590
VHC+ +K+GL + + N LI+MY KCGSLG AR++FDS+D D++SWS+LIVGYAQ+G
Sbjct: 495 VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGF 554
Query: 591 GEEAFKLFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCS 650
GEEA LF+ M+ G++PN +TFVG+LTACSH+G+VEEGLKLY TMQ E GISPT+EHCS
Sbjct: 555 GEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS 614
Query: 651 CMVDLLARAGCFDGAEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPS 710
C+VDLLARAG + AE FI +M +PDVVVWKTLL+AC+ GN+ + ++AAE +LK DP
Sbjct: 615 CVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPF 674
Query: 711 NSAALVMLCNIHASSGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPE 770
NS A V+LC++HASSG+W + A LRSSM++ DV K+PGQSWIEI+D++H+FFAED HPE
Sbjct: 675 NSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPE 734
Query: 771 RGRIYTMLEELMLQVLDD 785
R IYT+L + Q+LD+
Sbjct: 735 RDDIYTVLHNIWSQMLDE 752
BLAST of Lcy06g021590 vs. ExPASy Swiss-Prot
Match:
Q9SVA5 (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E52 PE=3 SV=1)
HSP 1 Score: 468.4 bits (1204), Expect = 1.6e-130
Identity = 252/721 (34.95%), Postives = 416/721 (57.70%), Query Frame = 0
Query: 70 IISLCKKN-LHREALQTF-DIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHMST 129
++S C + ++ E+L F + ++ R +SP + I + I ACS L GR + + +
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYI-LSSFIQACSGLD--GRGRWMVFQLQS 175
Query: 130 F----NYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDN 189
F + D+ + +++ Y K G++ AR VFDA+P K+ V+WT+MISG G+
Sbjct: 176 FLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYV 235
Query: 190 AITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNALIS 249
++ L+ Q++ +PD + +V+ +CS L +Q+HAH+L+ N LI
Sbjct: 236 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 295
Query: 250 MYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEF 309
Y K ++ A +F+ + K++ISW ++++G+ Q EA+ F M S+ +P+ +
Sbjct: 296 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMY 355
Query: 310 IFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYQI 369
S ++C+ L +G Q+H IK LG+D + SL DMYAKC L AR VF
Sbjct: 356 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 415
Query: 370 EKPDLVAWNAIIAGFASVD---DIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 429
D+V +NA+I G++ + ++ E+++ F MR + P+ +T +SLL A + L
Sbjct: 416 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 475
Query: 430 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 489
Q+H + K +L+I ++L+ +YS C L D+ +F+++ K D+V WN+M
Sbjct: 476 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGY 535
Query: 490 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 549
+QQ++ E L L + S RPD T N++ ++G +AS ++G + HC ++K GL +
Sbjct: 536 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 595
Query: 550 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 609
++NAL++MY KCGS A K FDS + D++ W+S+I YA G G++A ++ M
Sbjct: 596 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 655
Query: 610 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 669
G++PN ITFVG+L+ACSH G+VE+GLK + M GI P EH CMV LL RAG +
Sbjct: 656 GIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNK 715
Query: 670 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 729
A I++MP P +VW++LL+ C GN+E+ + AAE+ + +DP +S + ML NI+AS
Sbjct: 716 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 775
Query: 730 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 782
G W + ++R M+ V K PG+SWI I VH+F ++D H + +IY +L++L++Q
Sbjct: 776 KGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQ 830
BLAST of Lcy06g021590 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 459.1 bits (1180), Expect = 9.8e-128
Identity = 247/713 (34.64%), Postives = 387/713 (54.28%), Query Frame = 0
Query: 75 KKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHMSTFNYQPDL 134
K+ A++ F +K S +S T +++A + L+ G +H ++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRS-TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 363
Query: 135 ILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMLRS 194
+ + +++MY KC ++ A VF+A+ KN V W +MI GY+H G+ + L++ M S
Sbjct: 364 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 423
Query: 195 GYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNALISMYTKHSQISDA 254
GY D FTF S++ +C+ D + Q H+ ++K + +L NAL+ MY K + DA
Sbjct: 424 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 483
Query: 255 INVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEFIFGSAFSACSK 314
+F + +D ++W ++I + Q E EA F+ M + + S AC+
Sbjct: 484 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL-ASTLKACTH 543
Query: 315 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYQIEKPDLVAWNAI 374
+ G+Q+H L +K GL DL G SL DMY+KCG + AR VF + + +V+ NA+
Sbjct: 544 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 603
Query: 375 IAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLYQGMQVHSYIIKMSF 434
IAG+ S ++++E++ F +M G+ P+++T +++ AC +P L G Q H I K F
Sbjct: 604 IAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 663
Query: 435 DLEIPVCN-SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTACLQQNQAGEVLRLT 494
E SLL MY + +A +F ++ + IV W M++ Q E L+
Sbjct: 664 SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFY 723
Query: 495 KRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDTSVSNALINMYTKC 554
K M + PD T VL ++S G +H I +LD SN LI+MY KC
Sbjct: 724 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 783
Query: 555 GSLGSARKMFDSI-DTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITFVGI 614
G + + ++FD + +++SW+SLI GYA+ G E+A K+F +MR + P+EITF+G+
Sbjct: 784 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 843
Query: 615 LTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDGAEGFIKQMPFDP 674
LTACSH G V +G K++ M + GI +H +CMVDLL R G A+ FI+ P
Sbjct: 844 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP 903
Query: 675 DVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHASSGHWNDLARLRS 734
D +W +LL ACR+HG+ G+ +AE +++ +P NS+A V+L NI+AS G W LR
Sbjct: 904 DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRK 963
Query: 735 SMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQVLDDS 786
MR V KVPG SWI+++ R H+F A D H E G+I LE+L + DD+
Sbjct: 964 VMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDA 1013
BLAST of Lcy06g021590 vs. ExPASy Swiss-Prot
Match:
Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)
HSP 1 Score: 457.2 bits (1175), Expect = 3.7e-127
Identity = 241/712 (33.85%), Postives = 401/712 (56.32%), Query Frame = 0
Query: 80 REALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHMSTFNYQPDLILQNH 139
R A+ D+ + P+ S+T++ L+ +C R G+ +H + F+ +PD +L N
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 140 ILNMYGKCGSLKEARNVFDAM---PLKNVVSWTSMISGYSHYGQEDNAITLYVQMLRSGY 199
++++Y K G +A +VF+ M ++VVSW++M++ Y + G+E +AI ++V+ L G
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 200 IPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKS-EFGGHLIAQNALISMYTK-HSQISDA 259
+P+ + + +V+++CS D + R ++K+ F + +LI M+ K + +A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 260 INVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEFIFGSAFSACSK 319
VF + ++++W MI Q+G+ EA+ F +M+ ++ ++F S FSAC++
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAE 282
Query: 320 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKC---GFLGSARTVFYQIEKPDLVAW 379
L + G+Q+H I+ GL D+ CSL DMYAKC G + R VF ++E +++W
Sbjct: 283 LENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 342
Query: 380 NAIIAGFASVDDI-KESMSFFSQMRHTG-LAPNDVTVLSLLCACSEPVMLYQGMQVHSYI 439
A+I G+ ++ E+++ FS+M G + PN T S AC G QV
Sbjct: 343 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 402
Query: 440 IKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTACLQQNQAGEV 499
K V NS++SM+ K + DA + FE + K ++VS+NT L + +
Sbjct: 403 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQA 462
Query: 500 LRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDTSVSNALINM 559
+L + + T ++L + S G Q+H ++K GL+ + V NALI+M
Sbjct: 463 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 522
Query: 560 YTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITF 619
Y+KCGS+ +A ++F+ ++ ++ISW+S+I G+A+ G + F M GVKPNE+T+
Sbjct: 523 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 582
Query: 620 VGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDGAEGFIKQMP 679
V IL+ACSH+G+V EG + + +M E+ I P EH +CMVDLL RAG A FI MP
Sbjct: 583 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 642
Query: 680 FDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHASSGHWNDLAR 739
F DV+VW+T L ACRVH N E+GK AA +L+ DP+ AA + L NI+A +G W +
Sbjct: 643 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 702
Query: 740 LRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQV 782
+R M++ ++ K G SWIE+ D++H F+ D+ HP +IY L+ L+ ++
Sbjct: 703 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
BLAST of Lcy06g021590 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 453.8 bits (1166), Expect = 4.1e-126
Identity = 234/723 (32.37%), Postives = 396/723 (54.77%), Query Frame = 0
Query: 66 YDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHM 125
++ I + K L EAL+ + ++ SP K T+ +I AC+ L E G ++ +
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDK-YTFPSVIKACAGLFDAEMGDLVYEQI 133
Query: 126 STFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAI 185
++ DL + N +++MY + G L AR VFD MP++++VSW S+ISGYS +G + A+
Sbjct: 134 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 193
Query: 186 TLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNALISMY 245
+Y ++ S +PD FT SV+ + L + LH LKS ++ N L++MY
Sbjct: 194 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 253
Query: 246 TKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEFIF 305
K + +DA VF + +D +S+ +MI G+ +L E++ F E L Q ++P+
Sbjct: 254 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTV 313
Query: 306 GSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYQIEK 365
S AC L + + + I+ +K G + L D+YAKCG + +AR VF +E
Sbjct: 314 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 373
Query: 366 PDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLYQGMQV 425
D V+WN+II+G+ D+ E+M F M + +T L L+ + L G +
Sbjct: 374 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 433
Query: 426 HSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTACLQQNQ 485
HS IK +++ V N+L+ MY+KC + D+L+IF +G D V+WNT+++AC++
Sbjct: 434 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGD 493
Query: 486 AGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDTSVSNA 545
L++T +M S + PD T L +A+ +G ++HC +++ G + + NA
Sbjct: 494 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 553
Query: 546 LINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPN 605
LI MY+KCG L ++ ++F+ + D+++W+ +I Y G GE+A + F M G+ P+
Sbjct: 554 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPD 613
Query: 606 EITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDGAEGFI 665
+ F+ I+ ACSH G+V+EGL + M+ I P EH +C+VDLL+R+ AE FI
Sbjct: 614 SVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 673
Query: 666 KQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHASSGHWN 725
+ MP PD +W ++L ACR G++E +R + +++ +P + ++ N +A+ W+
Sbjct: 674 QAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWD 733
Query: 726 DLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQVLDDS 785
++ +R S++ ++K PG SWIE+ VHVF + D P+ IY LE L + +
Sbjct: 734 KVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEG 792
Query: 786 FDP 789
+ P
Sbjct: 794 YIP 792
BLAST of Lcy06g021590 vs. ExPASy TrEMBL
Match:
A0A6J1G6A4 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451180 PE=4 SV=1)
HSP 1 Score: 1438.7 bits (3723), Expect = 0.0e+00
Identity = 708/789 (89.73%), Postives = 737/789 (93.41%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAF+R LNSIYF T SSEA++FFNPC CS ATS+K F+PR QLAFS RPNTQLAFS P
Sbjct: 1 MAFLRALNSIYFETFSSEAIIFFNPC-CS-ATSLKNFKPRLQLAFSHTRPNTQLAFSPSP 60
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
V+EQSYDDYIISLCKK L+REALQ F+ FQK SNSPL SITYTHLIN C SLRFLEHGRK
Sbjct: 61 VSEQSYDDYIISLCKKWLNREALQAFETFQKCSNSPLNSITYTHLINTCCSLRFLEHGRK 120
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IH HM+TFNYQPD+ILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ
Sbjct: 121 IHRHMTTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
EDNAITLYVQM RSG PDHFTFGSV+KSCSGLDD MLARQLHAHVLKSEFGGHLIAQNA
Sbjct: 181 EDNAITLYVQMFRSGCTPDHFTFGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNA 240
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK++QI+DAINVFSHIITKDLISW SMIAGFS+ GYELEAL+ FREMLSQPVYQP
Sbjct: 241 LISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQP 300
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
NEFIFGSAFSAC+KLLEPNYGRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFL SARTVF
Sbjct: 301 NEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCGFLRSARTVF 360
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
QIEKPDLVAWNAIIAGFASV D+KES S FSQMR TGLAPNDVTVLSLLCACSEPVMLY
Sbjct: 361 NQIEKPDLVAWNAIIAGFASVGDVKESTSLFSQMRITGLAPNDVTVLSLLCACSEPVMLY 420
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYI++M FD EIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTML AC
Sbjct: 421 QGMQVHSYIVQMGFDSEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMAC 480
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
L NQAGEVLRLTK ML SHI+PDHVTLTNVLVSSGQIAS+EVGSQVHC IMKSGLNLDT
Sbjct: 481 LHHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDT 540
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SVSNALINMY KCGSLGSARK+FDSI+ PDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL
Sbjct: 541 SVSNALINMYMKCGSLGSARKIFDSIENPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
GVKPNEITFVG LTACSHIGMVEEGLKLYRTMQEEDGI+PTREHCSCMVDLLARAGC D
Sbjct: 601 GVKPNEITFVGFLTACSHIGMVEEGLKLYRTMQEEDGIAPTREHCSCMVDLLARAGCLDE 660
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FI QMPFDPD+VVWKTLLAAC+VHGNLEVGKRAAE VLKTDPSNSAALVMLCNIHAS
Sbjct: 661 AEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPSNSAALVMLCNIHAS 720
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SGHWNDLA+LRSSMRQMDVSKVPGQSWIEIKDRVHVF AEDSLHPERGRIY MLEELMLQ
Sbjct: 721 SGHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERGRIYRMLEELMLQ 780
Query: 781 VLDDSFDPI 790
+LDDS DPI
Sbjct: 781 ILDDSCDPI 787
BLAST of Lcy06g021590 vs. ExPASy TrEMBL
Match:
A0A6J1KU81 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498713 PE=4 SV=1)
HSP 1 Score: 1432.5 bits (3707), Expect = 0.0e+00
Identity = 703/789 (89.10%), Postives = 737/789 (93.41%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAF+R LNSIYF T SSEA++FFNPC CS ATS+K F+PR QLAFS RPNTQLAFS P
Sbjct: 1 MAFLRALNSIYFETFSSEAIIFFNPC-CS-ATSLKNFKPRLQLAFSHTRPNTQLAFSPTP 60
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
VTEQSYDDYIISLCKK L+REALQ F+ FQK SNSPL SITYTHLIN CSSLRFLEHGRK
Sbjct: 61 VTEQSYDDYIISLCKKGLNREALQAFETFQKCSNSPLNSITYTHLINTCSSLRFLEHGRK 120
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IH HM+TFNYQPD++LQNHILNMYGKCGSLKEARNVFDAM LKNVVSWTSMISGYSHYGQ
Sbjct: 121 IHRHMTTFNYQPDILLQNHILNMYGKCGSLKEARNVFDAMSLKNVVSWTSMISGYSHYGQ 180
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
EDNAITLYVQM RSG PDHFTFGSV+KSCSGL+D MLARQLHAHVLKSEFGGHLIAQNA
Sbjct: 181 EDNAITLYVQMFRSGCTPDHFTFGSVLKSCSGLEDSMLARQLHAHVLKSEFGGHLIAQNA 240
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK++QI+DAINVFSHIITKDLISW SMIAGFS+ GYELEAL+ FREMLSQPVY P
Sbjct: 241 LISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYHP 300
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
NEFIFGSAFSAC+KLLEPNYGRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFL SARTVF
Sbjct: 301 NEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCGFLRSARTVF 360
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
QIEKPDLVAWNAIIAGFASV D+KESMS FSQMR TGLA NDVTVLSLLCACS+PVMLY
Sbjct: 361 NQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLASNDVTVLSLLCACSDPVMLY 420
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYI++M FD EIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTML AC
Sbjct: 421 QGMQVHSYIVQMGFDSEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMAC 480
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
L NQAGEVLRLTK ML SHI+PD+VTLTNVLVSSGQIAS+EVGSQVHC IMKSGLNLDT
Sbjct: 481 LHHNQAGEVLRLTKTMLVSHIKPDYVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDT 540
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SV NALINMY KCGS+GSARK+FDSID PDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL
Sbjct: 541 SVLNALINMYMKCGSVGSARKIFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGI+PT+EHCSCMVDLLARAGC DG
Sbjct: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGIAPTKEHCSCMVDLLARAGCLDG 660
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FI QMPFDPD+VVWKTLLAAC+VHGNLEVGKRAAE VLK+DPSNSAALVMLCN+HAS
Sbjct: 661 AEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKSDPSNSAALVMLCNMHAS 720
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVF AEDSLHPERGRIYTMLEEL LQ
Sbjct: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERGRIYTMLEELRLQ 780
Query: 781 VLDDSFDPI 790
+LDDS DPI
Sbjct: 781 ILDDSCDPI 787
BLAST of Lcy06g021590 vs. ExPASy TrEMBL
Match:
A0A6J1CVF9 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015138 PE=4 SV=1)
HSP 1 Score: 1401.7 bits (3627), Expect = 0.0e+00
Identity = 689/794 (86.78%), Postives = 729/794 (91.81%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAFIRTLNSIYFVTLSSEA++FF P S A I F+PR Q AFS IRPNTQ+AFS CP
Sbjct: 1 MAFIRTLNSIYFVTLSSEAIIFFTPRSL--ANPINIFKPRLQFAFSHIRPNTQIAFSPCP 60
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
EQSYDDYIISLCKKN REALQ FDIF+K ++ PLKSITY+HLINACS LR LEHGR+
Sbjct: 61 APEQSYDDYIISLCKKNFPREALQAFDIFRKCTSFPLKSITYSHLINACSYLRSLEHGRR 120
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IH HM FNYQPDLILQNHILNMYGKCGSLKEARNVFDAMP +NVVSWTS+ISGYSHYGQ
Sbjct: 121 IHGHMLAFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPQRNVVSWTSLISGYSHYGQ 180
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
EDNAITLYVQML+SGY+PDHFTFGSV+KSCSGLDDFMLARQLHAHVLKSEFGGHLI+QNA
Sbjct: 181 EDNAITLYVQMLQSGYVPDHFTFGSVIKSCSGLDDFMLARQLHAHVLKSEFGGHLISQNA 240
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK SQISDAINVF+ I+ KDLISWGSMIAGFSQLGYELEAL+HFREMLS VYQP
Sbjct: 241 LISMYTKFSQISDAINVFTRIMAKDLISWGSMIAGFSQLGYELEALHHFREMLSGHVYQP 300
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
N+FIFGSAFSACSKLLEPNYGRQIH LC+KFGLGSDLFAGCSLCDMYAKCG L SARTVF
Sbjct: 301 NQFIFGSAFSACSKLLEPNYGRQIHSLCMKFGLGSDLFAGCSLCDMYAKCGLLESARTVF 360
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
YQIEKPDLV+WNAIIAGFAS D KESMS FSQMRHTGLA NDVTVLSLLCACSEPVML
Sbjct: 361 YQIEKPDLVSWNAIIAGFASAGDAKESMSLFSQMRHTGLAANDVTVLSLLCACSEPVMLC 420
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYIIKM F LEI VCN LL+MYSKCSNLNDAL +FEDI NKADIVSWNT+LTAC
Sbjct: 421 QGMQVHSYIIKMGFYLEIHVCNCLLNMYSKCSNLNDALGVFEDIENKADIVSWNTVLTAC 480
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
LQQNQAGEVLRLTK+ML S I+PDHVT+TNVLVSSGQ+AS+EVGSQVHCFI+KSGLNLDT
Sbjct: 481 LQQNQAGEVLRLTKQMLVSSIKPDHVTVTNVLVSSGQVASYEVGSQVHCFIIKSGLNLDT 540
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SVSNALINMYTKCGSLGSA+KMFDSID PDIISWSSLIVGYAQAG G++AFKLFRTMRGL
Sbjct: 541 SVSNALINMYTKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGSGDKAFKLFRTMRGL 600
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
GVKPNEITFV ILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGC DG
Sbjct: 601 GVKPNEITFVVILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCLDG 660
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FIKQMPFDPD+VVWKTLLAAC++HGNLE+G+RAAE VLK DPSNSAALVMLCNIHAS
Sbjct: 661 AEEFIKQMPFDPDIVVWKTLLAACKIHGNLEIGRRAAENVLKIDPSNSAALVMLCNIHAS 720
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SGHW D A LRSSMRQMDVSKVPGQSWIEIKDRVHVF AEDSLHPE GRIYTMLEEL LQ
Sbjct: 721 SGHWKDFALLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPETGRIYTMLEELRLQ 780
Query: 781 VLDDSFDPIDEIDS 795
+LDDS DPI + S
Sbjct: 781 ILDDSCDPIQMVSS 792
BLAST of Lcy06g021590 vs. ExPASy TrEMBL
Match:
A0A6J1F1S7 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441412 PE=4 SV=1)
HSP 1 Score: 1391.3 bits (3600), Expect = 0.0e+00
Identity = 683/790 (86.46%), Postives = 728/790 (92.15%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAF-SSC 60
MAFIRTL+SIYFVTLSSEA+VFFNP CSPATSIK F+P+ +LA S IR ++ LA
Sbjct: 29 MAFIRTLHSIYFVTLSSEAIVFFNP--CSPATSIKNFKPQLRLALSHIRFSSLLASPPPS 88
Query: 61 PVTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGR 120
PVTE SYDD IISLCKK LHREALQ FDIFQK S+SPL SITYTHLI+ACSSLR LEHGR
Sbjct: 89 PVTEHSYDDNIISLCKKKLHREALQAFDIFQKCSSSPLNSITYTHLIHACSSLRSLEHGR 148
Query: 121 KIHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYG 180
KIHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARN+FDAMPLKN VSWTSMISGYSHYG
Sbjct: 149 KIHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNIFDAMPLKNAVSWTSMISGYSHYG 208
Query: 181 QEDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQN 240
Q+DNAITLYVQMLRSG+IPDHFTFGSVVKSCSGLDD MLARQLHAHVLKSEFGG+ IAQN
Sbjct: 209 QDDNAITLYVQMLRSGHIPDHFTFGSVVKSCSGLDDLMLARQLHAHVLKSEFGGNPIAQN 268
Query: 241 ALISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQ 300
ALISMYTK SQI+DA NVFSHII KDLISWGSMIAGFSQLGYE+EAL HFREMLSQ +YQ
Sbjct: 269 ALISMYTKFSQIADATNVFSHIIIKDLISWGSMIAGFSQLGYEIEALCHFREMLSQAIYQ 328
Query: 301 PNEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTV 360
PNEF+FGSAFSACS L EPN GRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFLGSARTV
Sbjct: 329 PNEFVFGSAFSACSSLSEPNCGRQIHGLCIKFGLGSDRFAGCSLCDMYAKCGFLGSARTV 388
Query: 361 FYQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVML 420
F QIEKPDLVAWNAIIAGFASV D KES+SFFSQMRHTGLA NDVTVLSLLCACS+P+ML
Sbjct: 389 FCQIEKPDLVAWNAIIAGFASVGDAKESLSFFSQMRHTGLASNDVTVLSLLCACSDPMML 448
Query: 421 YQGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTA 480
QGMQVHSYI+K FDLE+PVCN LLSMYSKCS LND+L+IFEDIGNKADIVSWNTMLTA
Sbjct: 449 NQGMQVHSYIVKTGFDLEVPVCNGLLSMYSKCSVLNDSLKIFEDIGNKADIVSWNTMLTA 508
Query: 481 CLQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLD 540
C QNQAGEVLRL K MLASHI+ D VTLTNVLVSSGQIAS+EVGSQVHCFIMKSG NLD
Sbjct: 509 CRLQNQAGEVLRLMKLMLASHIKSDRVTLTNVLVSSGQIASYEVGSQVHCFIMKSGQNLD 568
Query: 541 TSVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRG 600
TSVSNALINMY KCGSLG ARKMFDSI+ PD+ISWSSLIVGYAQAGCGEEAF+LFRTMRG
Sbjct: 569 TSVSNALINMYMKCGSLGCARKMFDSINDPDVISWSSLIVGYAQAGCGEEAFELFRTMRG 628
Query: 601 LGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFD 660
LG++PNEITF+GILTAC HIGMVEEGL+LYRTMQE+DGISPT+EHCSC+VDLLARAGC D
Sbjct: 629 LGIRPNEITFIGILTACCHIGMVEEGLRLYRTMQEQDGISPTKEHCSCIVDLLARAGCLD 688
Query: 661 GAEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHA 720
AE FIK+MPF+PD+VVW TLLAAC++HGNLEVGKRAAE VLK DPSNSAALVMLCNIHA
Sbjct: 689 AAEDFIKKMPFEPDIVVWMTLLAACKLHGNLEVGKRAAENVLKNDPSNSAALVMLCNIHA 748
Query: 721 SSGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELML 780
SSGHW D ARLR SMR+MDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELM+
Sbjct: 749 SSGHWKDFARLRRSMRRMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMV 808
Query: 781 QVLDDSFDPI 790
Q+LDDS DP+
Sbjct: 809 QILDDSCDPL 816
BLAST of Lcy06g021590 vs. ExPASy TrEMBL
Match:
A0A6J1J911 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482386 PE=4 SV=1)
HSP 1 Score: 1387.9 bits (3591), Expect = 0.0e+00
Identity = 679/789 (86.06%), Postives = 725/789 (91.89%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAFIRTLNSIYFVTLSSEA+VFFNP CSPATSIK F+P+ LA S IR ++ LA P
Sbjct: 29 MAFIRTLNSIYFVTLSSEAIVFFNP--CSPATSIKNFKPQLHLALSHIRFSSLLASPPSP 88
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
VTE S+DD IISLCKK LHREALQ FDIF K S+SPL SITYTHLI+ACSSLRFLEHGRK
Sbjct: 89 VTEHSHDDNIISLCKKKLHREALQAFDIFHKCSSSPLNSITYTHLIHACSSLRFLEHGRK 148
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARN+FDAMPLKN VSWTSMISGYSHYG+
Sbjct: 149 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNIFDAMPLKNAVSWTSMISGYSHYGE 208
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
+DNAITLYVQMLRSG+IPDHFTFGSVVKSCSGLDD MLARQLHAHVLKSEFGG+ IAQNA
Sbjct: 209 DDNAITLYVQMLRSGHIPDHFTFGSVVKSCSGLDDLMLARQLHAHVLKSEFGGNPIAQNA 268
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK SQI+DA NVFSHIITKDLISWGSMIAGFSQLG E+EAL HFREMLSQP+YQP
Sbjct: 269 LISMYTKFSQIADATNVFSHIITKDLISWGSMIAGFSQLGCEIEALCHFREMLSQPIYQP 328
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
NEF+FGSAFSACS L EPN GRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFLGSARTVF
Sbjct: 329 NEFVFGSAFSACSNLSEPNCGRQIHGLCIKFGLGSDRFAGCSLCDMYAKCGFLGSARTVF 388
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
QIEKPDLVAWNAIIAGFASV D KES+SFFSQMRHTGLA NDVTVLSLLCACSEP+ML
Sbjct: 389 CQIEKPDLVAWNAIIAGFASVGDAKESLSFFSQMRHTGLASNDVTVLSLLCACSEPMMLN 448
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYI+K FDLE+ VCN LLSMYSKCS+LND+L+IFEDIGNKAD+VSWNTMLTAC
Sbjct: 449 QGMQVHSYIVKTGFDLEVLVCNGLLSMYSKCSDLNDSLKIFEDIGNKADVVSWNTMLTAC 508
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
+NQAGEVLRL K MLASHI+ D VTLTNVLVSSG IAS+EVGSQVHCFIMKSG NLDT
Sbjct: 509 RLRNQAGEVLRLMKLMLASHIKSDRVTLTNVLVSSGLIASYEVGSQVHCFIMKSGQNLDT 568
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SVSNALINMY KCGSLG ARKMFDSID PD+ISWSSLIVGYAQAGCGEEAF+LFRTMRGL
Sbjct: 569 SVSNALINMYMKCGSLGCARKMFDSIDDPDVISWSSLIVGYAQAGCGEEAFELFRTMRGL 628
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
G++PNEITF+GILTAC H+GMVEEGL+LYRTMQE+D ISPT+EHCSC+VDLLARAGC D
Sbjct: 629 GIRPNEITFLGILTACCHVGMVEEGLRLYRTMQEQDDISPTKEHCSCIVDLLARAGCLDA 688
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FIK+MPF+PD+VVW TLLAAC+VHGNLEVGKRAAE VL+ DPSNSAALVMLCNIHAS
Sbjct: 689 AEDFIKKMPFEPDIVVWMTLLAACKVHGNLEVGKRAAENVLRNDPSNSAALVMLCNIHAS 748
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SGHW D ARLR SMR+MDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIY MLEELMLQ
Sbjct: 749 SGHWKDFARLRRSMRRMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYIMLEELMLQ 808
Query: 781 VLDDSFDPI 790
+LDDS DP+
Sbjct: 809 LLDDSCDPL 815
BLAST of Lcy06g021590 vs. NCBI nr
Match:
XP_022947264.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1438.7 bits (3723), Expect = 0.0e+00
Identity = 708/789 (89.73%), Postives = 737/789 (93.41%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAF+R LNSIYF T SSEA++FFNPC CS ATS+K F+PR QLAFS RPNTQLAFS P
Sbjct: 1 MAFLRALNSIYFETFSSEAIIFFNPC-CS-ATSLKNFKPRLQLAFSHTRPNTQLAFSPSP 60
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
V+EQSYDDYIISLCKK L+REALQ F+ FQK SNSPL SITYTHLIN C SLRFLEHGRK
Sbjct: 61 VSEQSYDDYIISLCKKWLNREALQAFETFQKCSNSPLNSITYTHLINTCCSLRFLEHGRK 120
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IH HM+TFNYQPD+ILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ
Sbjct: 121 IHRHMTTFNYQPDMILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
EDNAITLYVQM RSG PDHFTFGSV+KSCSGLDD MLARQLHAHVLKSEFGGHLIAQNA
Sbjct: 181 EDNAITLYVQMFRSGCTPDHFTFGSVLKSCSGLDDSMLARQLHAHVLKSEFGGHLIAQNA 240
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK++QI+DAINVFSHIITKDLISW SMIAGFS+ GYELEAL+ FREMLSQPVYQP
Sbjct: 241 LISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYQP 300
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
NEFIFGSAFSAC+KLLEPNYGRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFL SARTVF
Sbjct: 301 NEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCGFLRSARTVF 360
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
QIEKPDLVAWNAIIAGFASV D+KES S FSQMR TGLAPNDVTVLSLLCACSEPVMLY
Sbjct: 361 NQIEKPDLVAWNAIIAGFASVGDVKESTSLFSQMRITGLAPNDVTVLSLLCACSEPVMLY 420
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYI++M FD EIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTML AC
Sbjct: 421 QGMQVHSYIVQMGFDSEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMAC 480
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
L NQAGEVLRLTK ML SHI+PDHVTLTNVLVSSGQIAS+EVGSQVHC IMKSGLNLDT
Sbjct: 481 LHHNQAGEVLRLTKTMLVSHIKPDHVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDT 540
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SVSNALINMY KCGSLGSARK+FDSI+ PDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL
Sbjct: 541 SVSNALINMYMKCGSLGSARKIFDSIENPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
GVKPNEITFVG LTACSHIGMVEEGLKLYRTMQEEDGI+PTREHCSCMVDLLARAGC D
Sbjct: 601 GVKPNEITFVGFLTACSHIGMVEEGLKLYRTMQEEDGIAPTREHCSCMVDLLARAGCLDE 660
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FI QMPFDPD+VVWKTLLAAC+VHGNLEVGKRAAE VLKTDPSNSAALVMLCNIHAS
Sbjct: 661 AEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAEKVLKTDPSNSAALVMLCNIHAS 720
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SGHWNDLA+LRSSMRQMDVSKVPGQSWIEIKDRVHVF AEDSLHPERGRIY MLEELMLQ
Sbjct: 721 SGHWNDLAQLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERGRIYRMLEELMLQ 780
Query: 781 VLDDSFDPI 790
+LDDS DPI
Sbjct: 781 ILDDSCDPI 787
BLAST of Lcy06g021590 vs. NCBI nr
Match:
XP_023005822.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1432.5 bits (3707), Expect = 0.0e+00
Identity = 703/789 (89.10%), Postives = 737/789 (93.41%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAF+R LNSIYF T SSEA++FFNPC CS ATS+K F+PR QLAFS RPNTQLAFS P
Sbjct: 1 MAFLRALNSIYFETFSSEAIIFFNPC-CS-ATSLKNFKPRLQLAFSHTRPNTQLAFSPTP 60
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
VTEQSYDDYIISLCKK L+REALQ F+ FQK SNSPL SITYTHLIN CSSLRFLEHGRK
Sbjct: 61 VTEQSYDDYIISLCKKGLNREALQAFETFQKCSNSPLNSITYTHLINTCSSLRFLEHGRK 120
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IH HM+TFNYQPD++LQNHILNMYGKCGSLKEARNVFDAM LKNVVSWTSMISGYSHYGQ
Sbjct: 121 IHRHMTTFNYQPDILLQNHILNMYGKCGSLKEARNVFDAMSLKNVVSWTSMISGYSHYGQ 180
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
EDNAITLYVQM RSG PDHFTFGSV+KSCSGL+D MLARQLHAHVLKSEFGGHLIAQNA
Sbjct: 181 EDNAITLYVQMFRSGCTPDHFTFGSVLKSCSGLEDSMLARQLHAHVLKSEFGGHLIAQNA 240
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK++QI+DAINVFSHIITKDLISW SMIAGFS+ GYELEAL+ FREMLSQPVY P
Sbjct: 241 LISMYTKYNQIADAINVFSHIITKDLISWSSMIAGFSRFGYELEALFLFREMLSQPVYHP 300
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
NEFIFGSAFSAC+KLLEPNYGRQIHGLCIKFGLGSD FAGCSLCDMYAKCGFL SARTVF
Sbjct: 301 NEFIFGSAFSACTKLLEPNYGRQIHGLCIKFGLGSDAFAGCSLCDMYAKCGFLRSARTVF 360
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
QIEKPDLVAWNAIIAGFASV D+KESMS FSQMR TGLA NDVTVLSLLCACS+PVMLY
Sbjct: 361 NQIEKPDLVAWNAIIAGFASVGDVKESMSLFSQMRITGLASNDVTVLSLLCACSDPVMLY 420
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYI++M FD EIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTML AC
Sbjct: 421 QGMQVHSYIVQMGFDSEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLMAC 480
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
L NQAGEVLRLTK ML SHI+PD+VTLTNVLVSSGQIAS+EVGSQVHC IMKSGLNLDT
Sbjct: 481 LHHNQAGEVLRLTKTMLVSHIKPDYVTLTNVLVSSGQIASYEVGSQVHCLIMKSGLNLDT 540
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SV NALINMY KCGS+GSARK+FDSID PDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL
Sbjct: 541 SVLNALINMYMKCGSVGSARKIFDSIDNPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGI+PT+EHCSCMVDLLARAGC DG
Sbjct: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGIAPTKEHCSCMVDLLARAGCLDG 660
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FI QMPFDPD+VVWKTLLAAC+VHGNLEVGKRAAE VLK+DPSNSAALVMLCN+HAS
Sbjct: 661 AEDFINQMPFDPDIVVWKTLLAACKVHGNLEVGKRAAENVLKSDPSNSAALVMLCNMHAS 720
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVF AEDSLHPERGRIYTMLEEL LQ
Sbjct: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPERGRIYTMLEELRLQ 780
Query: 781 VLDDSFDPI 790
+LDDS DPI
Sbjct: 781 ILDDSCDPI 787
BLAST of Lcy06g021590 vs. NCBI nr
Match:
XP_038903429.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 [Benincasa hispida])
HSP 1 Score: 1408.7 bits (3645), Expect = 0.0e+00
Identity = 694/790 (87.85%), Postives = 729/790 (92.28%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
M FIRTLNSIYFVTL+S+A VFF P SP SIK F+ R LA S IR NT LAFS CP
Sbjct: 1 MGFIRTLNSIYFVTLASDASVFFTP--FSPTASIKNFKSRLHLALSHIRLNTHLAFSPCP 60
Query: 61 VTEQ-SYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGR 120
VTE S+DD IISLCKKNLHREALQ FDIFQK S+SPLKSITYTHLINACSSLR LEHGR
Sbjct: 61 VTEHYSHDDKIISLCKKNLHREALQAFDIFQKCSSSPLKSITYTHLINACSSLRSLEHGR 120
Query: 121 KIHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYG 180
+IH HM TFN QPD+ILQNHILNMYGKCGSLKEARN+F+AMPLKNVVSWTSMISGYSHYG
Sbjct: 121 EIHRHMLTFNCQPDMILQNHILNMYGKCGSLKEARNIFNAMPLKNVVSWTSMISGYSHYG 180
Query: 181 QEDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQN 240
QEDNAIT+YVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQN
Sbjct: 181 QEDNAITMYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQN 240
Query: 241 ALISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQ 300
ALISMYTK S+I+DA NVFSHI+ KDLISWGSMIAGFSQLGYELEAL HFREM+SQPVYQ
Sbjct: 241 ALISMYTKFSRIADATNVFSHIVIKDLISWGSMIAGFSQLGYELEALCHFREMVSQPVYQ 300
Query: 301 PNEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTV 360
PNEF+FGSAFSACSKLLEPN GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTV
Sbjct: 301 PNEFVFGSAFSACSKLLEPNCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTV 360
Query: 361 FYQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVML 420
FY IEKPDLVAWNAIIAGFASV D KES+SFFSQMRHTGL PNDVTVLSLLCACSEPVML
Sbjct: 361 FYHIEKPDLVAWNAIIAGFASVGDAKESLSFFSQMRHTGLVPNDVTVLSLLCACSEPVML 420
Query: 421 YQGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTA 480
QGMQVHSY++KM FDL+IPV N+LL MYSKCSNL DAL IFE IG KADIVSWNT+LTA
Sbjct: 421 NQGMQVHSYVVKMGFDLDIPVSNTLLGMYSKCSNLTDALHIFEGIGTKADIVSWNTLLTA 480
Query: 481 CLQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLD 540
CLQQNQAGEVLRLTK MLASHI+PDHVTLTNVLVSSGQIAS+EVGSQVHCFIMKSGLNLD
Sbjct: 481 CLQQNQAGEVLRLTKLMLASHIKPDHVTLTNVLVSSGQIASYEVGSQVHCFIMKSGLNLD 540
Query: 541 TSVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRG 600
TSVSNALIN YTKCGSLG ARKMFDSID PDIISWSSLIVGYAQAGCGEEAF LFRTMR
Sbjct: 541 TSVSNALINTYTKCGSLGCARKMFDSIDNPDIISWSSLIVGYAQAGCGEEAFVLFRTMRS 600
Query: 601 LGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFD 660
LGVKPNEITFVGIL ACSHIGMVEEGLKLY+TMQ+E GISPT+EHCSCMVDLLARAGC D
Sbjct: 601 LGVKPNEITFVGILIACSHIGMVEEGLKLYKTMQKEYGISPTKEHCSCMVDLLARAGCLD 660
Query: 661 GAEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHA 720
GAE FIKQMPF+PD+VVWKTLLAAC+VHGNLEVGKRAAE VLK DPSNSAALVMLCNIHA
Sbjct: 661 GAENFIKQMPFNPDIVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAALVMLCNIHA 720
Query: 721 SSGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELML 780
SSGHW D A+ RSSMRQM+VSKVPGQSWIEIKD+VHVF AEDSLHPERG+IYT+LEELML
Sbjct: 721 SSGHWKDFAQCRSSMRQMNVSKVPGQSWIEIKDKVHVFLAEDSLHPERGKIYTILEELML 780
Query: 781 QVLDDSFDPI 790
Q+LDD DPI
Sbjct: 781 QILDDGCDPI 788
BLAST of Lcy06g021590 vs. NCBI nr
Match:
XP_022145760.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 [Momordica charantia])
HSP 1 Score: 1401.7 bits (3627), Expect = 0.0e+00
Identity = 689/794 (86.78%), Postives = 729/794 (91.81%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAFIRTLNSIYFVTLSSEA++FF P S A I F+PR Q AFS IRPNTQ+AFS CP
Sbjct: 1 MAFIRTLNSIYFVTLSSEAIIFFTPRSL--ANPINIFKPRLQFAFSHIRPNTQIAFSPCP 60
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
EQSYDDYIISLCKKN REALQ FDIF+K ++ PLKSITY+HLINACS LR LEHGR+
Sbjct: 61 APEQSYDDYIISLCKKNFPREALQAFDIFRKCTSFPLKSITYSHLINACSYLRSLEHGRR 120
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IH HM FNYQPDLILQNHILNMYGKCGSLKEARNVFDAMP +NVVSWTS+ISGYSHYGQ
Sbjct: 121 IHGHMLAFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPQRNVVSWTSLISGYSHYGQ 180
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
EDNAITLYVQML+SGY+PDHFTFGSV+KSCSGLDDFMLARQLHAHVLKSEFGGHLI+QNA
Sbjct: 181 EDNAITLYVQMLQSGYVPDHFTFGSVIKSCSGLDDFMLARQLHAHVLKSEFGGHLISQNA 240
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK SQISDAINVF+ I+ KDLISWGSMIAGFSQLGYELEAL+HFREMLS VYQP
Sbjct: 241 LISMYTKFSQISDAINVFTRIMAKDLISWGSMIAGFSQLGYELEALHHFREMLSGHVYQP 300
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
N+FIFGSAFSACSKLLEPNYGRQIH LC+KFGLGSDLFAGCSLCDMYAKCG L SARTVF
Sbjct: 301 NQFIFGSAFSACSKLLEPNYGRQIHSLCMKFGLGSDLFAGCSLCDMYAKCGLLESARTVF 360
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
YQIEKPDLV+WNAIIAGFAS D KESMS FSQMRHTGLA NDVTVLSLLCACSEPVML
Sbjct: 361 YQIEKPDLVSWNAIIAGFASAGDAKESMSLFSQMRHTGLAANDVTVLSLLCACSEPVMLC 420
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYIIKM F LEI VCN LL+MYSKCSNLNDAL +FEDI NKADIVSWNT+LTAC
Sbjct: 421 QGMQVHSYIIKMGFYLEIHVCNCLLNMYSKCSNLNDALGVFEDIENKADIVSWNTVLTAC 480
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
LQQNQAGEVLRLTK+ML S I+PDHVT+TNVLVSSGQ+AS+EVGSQVHCFI+KSGLNLDT
Sbjct: 481 LQQNQAGEVLRLTKQMLVSSIKPDHVTVTNVLVSSGQVASYEVGSQVHCFIIKSGLNLDT 540
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SVSNALINMYTKCGSLGSA+KMFDSID PDIISWSSLIVGYAQAG G++AFKLFRTMRGL
Sbjct: 541 SVSNALINMYTKCGSLGSAQKMFDSIDNPDIISWSSLIVGYAQAGSGDKAFKLFRTMRGL 600
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
GVKPNEITFV ILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGC DG
Sbjct: 601 GVKPNEITFVVILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCLDG 660
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FIKQMPFDPD+VVWKTLLAAC++HGNLE+G+RAAE VLK DPSNSAALVMLCNIHAS
Sbjct: 661 AEEFIKQMPFDPDIVVWKTLLAACKIHGNLEIGRRAAENVLKIDPSNSAALVMLCNIHAS 720
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SGHW D A LRSSMRQMDVSKVPGQSWIEIKDRVHVF AEDSLHPE GRIYTMLEEL LQ
Sbjct: 721 SGHWKDFALLRSSMRQMDVSKVPGQSWIEIKDRVHVFLAEDSLHPETGRIYTMLEELRLQ 780
Query: 781 VLDDSFDPIDEIDS 795
+LDDS DPI + S
Sbjct: 781 ILDDSCDPIQMVSS 792
BLAST of Lcy06g021590 vs. NCBI nr
Match:
XP_023526527.1 (pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023526528.1 pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023526529.1 pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1394.8 bits (3609), Expect = 0.0e+00
Identity = 682/789 (86.44%), Postives = 725/789 (91.89%), Query Frame = 0
Query: 1 MAFIRTLNSIYFVTLSSEAVVFFNPCSCSPATSIKKFEPRQQLAFSRIRPNTQLAFSSCP 60
MAFIRTL+SIYFVT SSEA+VFFNP CSPA SIK F+P+ LA S IR N+Q+AFS P
Sbjct: 29 MAFIRTLHSIYFVTYSSEAIVFFNP--CSPANSIKNFKPQLHLALSHIRLNSQIAFSPSP 88
Query: 61 VTEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRK 120
V E SYDD IISLCKK LHREALQ FDIFQK SNSPL SITYTHLI+ACSSLR LEHGRK
Sbjct: 89 VAEHSYDDNIISLCKKKLHREALQAFDIFQKCSNSPLNSITYTHLIHACSSLRSLEHGRK 148
Query: 121 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQ 180
IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARN+FDAMPLKN VSWTSMISGYSHYGQ
Sbjct: 149 IHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNIFDAMPLKNAVSWTSMISGYSHYGQ 208
Query: 181 EDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNA 240
+DNAITLYVQMLRSG+IPDHFTFGSVVKSCSGLDD MLARQLHAHVLKSEFGG+ IAQNA
Sbjct: 209 DDNAITLYVQMLRSGHIPDHFTFGSVVKSCSGLDDLMLARQLHAHVLKSEFGGNPIAQNA 268
Query: 241 LISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQP 300
LISMYTK SQI+DA NVFSHIITK+LISWGSMIAGFSQLGYE+EAL HFREMLSQP+YQP
Sbjct: 269 LISMYTKFSQIADATNVFSHIITKNLISWGSMIAGFSQLGYEIEALCHFREMLSQPIYQP 328
Query: 301 NEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVF 360
NEF+FGSAFSACS L EPN GRQIHGLCIKFGLG D FAGCSLCDMYAKCGFLGSARTVF
Sbjct: 329 NEFVFGSAFSACSNLSEPNCGRQIHGLCIKFGLGRDRFAGCSLCDMYAKCGFLGSARTVF 388
Query: 361 YQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 420
QIEKPDLVAWNAIIAGFASV D KES+SFFSQMRHTGLA NDVTVLSLLCACSEP+ML
Sbjct: 389 CQIEKPDLVAWNAIIAGFASVGDAKESLSFFSQMRHTGLASNDVTVLSLLCACSEPMMLN 448
Query: 421 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 480
QGMQVHSYI+K FDLE+PVCN LLSMYSKCS+LND+L+IFEDIGNKAD+VSWNTMLT C
Sbjct: 449 QGMQVHSYIVKTGFDLEVPVCNGLLSMYSKCSDLNDSLKIFEDIGNKADVVSWNTMLTVC 508
Query: 481 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 540
QNQAGEVLRL K MLAS I+ D VTLTNVLVSSGQIAS+EVGSQVHCFIMKSG NLDT
Sbjct: 509 RLQNQAGEVLRLMKLMLASRIKSDRVTLTNVLVSSGQIASYEVGSQVHCFIMKSGQNLDT 568
Query: 541 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 600
SVSNALINMY KCGSLG A+KMFDSID PD+ISWSSLIVGYAQAGCGEEAFKLFRTMRGL
Sbjct: 569 SVSNALINMYMKCGSLGCAQKMFDSIDDPDVISWSSLIVGYAQAGCGEEAFKLFRTMRGL 628
Query: 601 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 660
G++PNEITF+GILTAC HIGMVEEGL+LYRTMQE+DGISPT+EH SC+VDLLARAGC D
Sbjct: 629 GIRPNEITFLGILTACCHIGMVEEGLRLYRTMQEQDGISPTKEHYSCIVDLLARAGCLDA 688
Query: 661 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 720
AE FIK+MPF+PD+VVW TLLAAC++HGNLEVGKRAAE VLK DPSNSAALVMLCNIHAS
Sbjct: 689 AEDFIKKMPFEPDIVVWMTLLAACKLHGNLEVGKRAAENVLKNDPSNSAALVMLCNIHAS 748
Query: 721 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 780
SG W D AR+R SMR+MDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ
Sbjct: 749 SGRWKDFARIRRSMRRMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 808
Query: 781 VLDDSFDPI 790
VLDDS DP+
Sbjct: 809 VLDDSCDPL 815
BLAST of Lcy06g021590 vs. TAIR 10
Match:
AT3G53360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 883.2 bits (2281), Expect = 1.5e-256
Identity = 427/738 (57.86%), Postives = 549/738 (74.39%), Query Frame = 0
Query: 51 NTQLAFSSCPV----TEQSYDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLI 110
N+Q+ +S V TE+ +D+I SLCK N +REAL+ FD QK S+ ++ TY LI
Sbjct: 15 NSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLI 74
Query: 111 NACSSLRFLEHGRKIHCHMSTFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVV 170
ACSS R L GRKIH H+ N + D IL NHIL+MYGKCGSL++AR VFD MP +N+V
Sbjct: 75 CACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLV 134
Query: 171 SWTSMISGYSHYGQEDNAITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHV 230
S+TS+I+GYS GQ AI LY++ML+ +PD F FGS++K+C+ D L +QLHA V
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 231 LKSEFGGHLIAQNALISMYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEAL 290
+K E HLIAQNALI+MY + +Q+SDA VF I KDLISW S+IAGFSQLG+E EAL
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 291 YHFREMLSQPVYQPNEFIFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDM 350
H +EMLS V+ PNE+IFGS+ ACS LL P+YG QIHGLCIK L + AGCSLCDM
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314
Query: 351 YAKCGFLGSARTVFYQIEKPDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTV 410
YA+CGFL SAR VF QIE+PD +WN IIAG A+ E++S FSQMR +G P+ +++
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 411 LSLLCACSEPVMLYQGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGN 470
SLLCA ++P+ L QGMQ+HSYIIK F ++ VCNSLL+MY+ CS+L +FED N
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 471 KADIVSWNTMLTACLQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQ 530
AD VSWNT+LTACLQ Q E+LRL K ML S PDH+T+ N+L +I+S ++GSQ
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494
Query: 531 VHCFIMKSGLNLDTSVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGC 590
VHC+ +K+GL + + N LI+MY KCGSLG AR++FDS+D D++SWS+LIVGYAQ+G
Sbjct: 495 VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGF 554
Query: 591 GEEAFKLFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCS 650
GEEA LF+ M+ G++PN +TFVG+LTACSH+G+VEEGLKLY TMQ E GISPT+EHCS
Sbjct: 555 GEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS 614
Query: 651 CMVDLLARAGCFDGAEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPS 710
C+VDLLARAG + AE FI +M +PDVVVWKTLL+AC+ GN+ + ++AAE +LK DP
Sbjct: 615 CVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPF 674
Query: 711 NSAALVMLCNIHASSGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPE 770
NS A V+LC++HASSG+W + A LRSSM++ DV K+PGQSWIEI+D++H+FFAED HPE
Sbjct: 675 NSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPE 734
Query: 771 RGRIYTMLEELMLQVLDD 785
R IYT+L + Q+LD+
Sbjct: 735 RDDIYTVLHNIWSQMLDE 752
BLAST of Lcy06g021590 vs. TAIR 10
Match:
AT4G39530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 468.4 bits (1204), Expect = 1.2e-131
Identity = 252/721 (34.95%), Postives = 416/721 (57.70%), Query Frame = 0
Query: 70 IISLCKKN-LHREALQTF-DIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHMST 129
++S C + ++ E+L F + ++ R +SP + I + I ACS L GR + + +
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYI-LSSFIQACSGLD--GRGRWMVFQLQS 175
Query: 130 F----NYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDN 189
F + D+ + +++ Y K G++ AR VFDA+P K+ V+WT+MISG G+
Sbjct: 176 FLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYV 235
Query: 190 AITLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNALIS 249
++ L+ Q++ +PD + +V+ +CS L +Q+HAH+L+ N LI
Sbjct: 236 SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLID 295
Query: 250 MYTKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEF 309
Y K ++ A +F+ + K++ISW ++++G+ Q EA+ F M S+ +P+ +
Sbjct: 296 SYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM-SKFGLKPDMY 355
Query: 310 IFGSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYQI 369
S ++C+ L +G Q+H IK LG+D + SL DMYAKC L AR VF
Sbjct: 356 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 415
Query: 370 EKPDLVAWNAIIAGFASVD---DIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLY 429
D+V +NA+I G++ + ++ E+++ F MR + P+ +T +SLL A + L
Sbjct: 416 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 475
Query: 430 QGMQVHSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTAC 489
Q+H + K +L+I ++L+ +YS C L D+ +F+++ K D+V WN+M
Sbjct: 476 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGY 535
Query: 490 LQQNQAGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDT 549
+QQ++ E L L + S RPD T N++ ++G +AS ++G + HC ++K GL +
Sbjct: 536 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 595
Query: 550 SVSNALINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGL 609
++NAL++MY KCGS A K FDS + D++ W+S+I YA G G++A ++ M
Sbjct: 596 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 655
Query: 610 GVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDG 669
G++PN ITFVG+L+ACSH G+VE+GLK + M GI P EH CMV LL RAG +
Sbjct: 656 GIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNK 715
Query: 670 AEGFIKQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHAS 729
A I++MP P +VW++LL+ C GN+E+ + AAE+ + +DP +S + ML NI+AS
Sbjct: 716 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 775
Query: 730 SGHWNDLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQ 782
G W + ++R M+ V K PG+SWI I VH+F ++D H + +IY +L++L++Q
Sbjct: 776 KGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQ 830
BLAST of Lcy06g021590 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 459.1 bits (1180), Expect = 7.0e-129
Identity = 247/713 (34.64%), Postives = 387/713 (54.28%), Query Frame = 0
Query: 75 KKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHMSTFNYQPDL 134
K+ A++ F +K S +S T +++A + L+ G +H ++
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRS-TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNI 363
Query: 135 ILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAITLYVQMLRS 194
+ + +++MY KC ++ A VF+A+ KN V W +MI GY+H G+ + L++ M S
Sbjct: 364 YVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS 423
Query: 195 GYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNALISMYTKHSQISDA 254
GY D FTF S++ +C+ D + Q H+ ++K + +L NAL+ MY K + DA
Sbjct: 424 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 483
Query: 255 INVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEFIFGSAFSACSK 314
+F + +D ++W ++I + Q E EA F+ M + + S AC+
Sbjct: 484 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL-ASTLKACTH 543
Query: 315 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYQIEKPDLVAWNAI 374
+ G+Q+H L +K GL DL G SL DMY+KCG + AR VF + + +V+ NA+
Sbjct: 544 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 603
Query: 375 IAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLYQGMQVHSYIIKMSF 434
IAG+ S ++++E++ F +M G+ P+++T +++ AC +P L G Q H I K F
Sbjct: 604 IAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGF 663
Query: 435 DLEIPVCN-SLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTACLQQNQAGEVLRLT 494
E SLL MY + +A +F ++ + IV W M++ Q E L+
Sbjct: 664 SSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFY 723
Query: 495 KRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDTSVSNALINMYTKC 554
K M + PD T VL ++S G +H I +LD SN LI+MY KC
Sbjct: 724 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 783
Query: 555 GSLGSARKMFDSI-DTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITFVGI 614
G + + ++FD + +++SW+SLI GYA+ G E+A K+F +MR + P+EITF+G+
Sbjct: 784 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 843
Query: 615 LTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDGAEGFIKQMPFDP 674
LTACSH G V +G K++ M + GI +H +CMVDLL R G A+ FI+ P
Sbjct: 844 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP 903
Query: 675 DVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHASSGHWNDLARLRS 734
D +W +LL ACR+HG+ G+ +AE +++ +P NS+A V+L NI+AS G W LR
Sbjct: 904 DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRK 963
Query: 735 SMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQVLDDS 786
MR V KVPG SWI+++ R H+F A D H E G+I LE+L + DD+
Sbjct: 964 VMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDA 1013
BLAST of Lcy06g021590 vs. TAIR 10
Match:
AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 457.2 bits (1175), Expect = 2.7e-128
Identity = 241/712 (33.85%), Postives = 401/712 (56.32%), Query Frame = 0
Query: 80 REALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHMSTFNYQPDLILQNH 139
R A+ D+ + P+ S+T++ L+ +C R G+ +H + F+ +PD +L N
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 140 ILNMYGKCGSLKEARNVFDAM---PLKNVVSWTSMISGYSHYGQEDNAITLYVQMLRSGY 199
++++Y K G +A +VF+ M ++VVSW++M++ Y + G+E +AI ++V+ L G
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 200 IPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKS-EFGGHLIAQNALISMYTK-HSQISDA 259
+P+ + + +V+++CS D + R ++K+ F + +LI M+ K + +A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 260 INVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEFIFGSAFSACSK 319
VF + ++++W MI Q+G+ EA+ F +M+ ++ ++F S FSAC++
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAE 282
Query: 320 LLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKC---GFLGSARTVFYQIEKPDLVAW 379
L + G+Q+H I+ GL D+ CSL DMYAKC G + R VF ++E +++W
Sbjct: 283 LENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 342
Query: 380 NAIIAGFASVDDI-KESMSFFSQMRHTG-LAPNDVTVLSLLCACSEPVMLYQGMQVHSYI 439
A+I G+ ++ E+++ FS+M G + PN T S AC G QV
Sbjct: 343 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 402
Query: 440 IKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTACLQQNQAGEV 499
K V NS++SM+ K + DA + FE + K ++VS+NT L + +
Sbjct: 403 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQA 462
Query: 500 LRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDTSVSNALINM 559
+L + + T ++L + S G Q+H ++K GL+ + V NALI+M
Sbjct: 463 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 522
Query: 560 YTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPNEITF 619
Y+KCGS+ +A ++F+ ++ ++ISW+S+I G+A+ G + F M GVKPNE+T+
Sbjct: 523 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 582
Query: 620 VGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDGAEGFIKQMP 679
V IL+ACSH+G+V EG + + +M E+ I P EH +CMVDLL RAG A FI MP
Sbjct: 583 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 642
Query: 680 FDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHASSGHWNDLAR 739
F DV+VW+T L ACRVH N E+GK AA +L+ DP+ AA + L NI+A +G W +
Sbjct: 643 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 702
Query: 740 LRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQV 782
+R M++ ++ K G SWIE+ D++H F+ D+ HP +IY L+ L+ ++
Sbjct: 703 MRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
BLAST of Lcy06g021590 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 453.8 bits (1166), Expect = 2.9e-127
Identity = 234/723 (32.37%), Postives = 396/723 (54.77%), Query Frame = 0
Query: 66 YDDYIISLCKKNLHREALQTFDIFQKRSNSPLKSITYTHLINACSSLRFLEHGRKIHCHM 125
++ I + K L EAL+ + ++ SP K T+ +I AC+ L E G ++ +
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDK-YTFPSVIKACAGLFDAEMGDLVYEQI 133
Query: 126 STFNYQPDLILQNHILNMYGKCGSLKEARNVFDAMPLKNVVSWTSMISGYSHYGQEDNAI 185
++ DL + N +++MY + G L AR VFD MP++++VSW S+ISGYS +G + A+
Sbjct: 134 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 193
Query: 186 TLYVQMLRSGYIPDHFTFGSVVKSCSGLDDFMLARQLHAHVLKSEFGGHLIAQNALISMY 245
+Y ++ S +PD FT SV+ + L + LH LKS ++ N L++MY
Sbjct: 194 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 253
Query: 246 TKHSQISDAINVFSHIITKDLISWGSMIAGFSQLGYELEALYHFREMLSQPVYQPNEFIF 305
K + +DA VF + +D +S+ +MI G+ +L E++ F E L Q ++P+
Sbjct: 254 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTV 313
Query: 306 GSAFSACSKLLEPNYGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLGSARTVFYQIEK 365
S AC L + + + I+ +K G + L D+YAKCG + +AR VF +E
Sbjct: 314 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 373
Query: 366 PDLVAWNAIIAGFASVDDIKESMSFFSQMRHTGLAPNDVTVLSLLCACSEPVMLYQGMQV 425
D V+WN+II+G+ D+ E+M F M + +T L L+ + L G +
Sbjct: 374 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 433
Query: 426 HSYIIKMSFDLEIPVCNSLLSMYSKCSNLNDALQIFEDIGNKADIVSWNTMLTACLQQNQ 485
HS IK +++ V N+L+ MY+KC + D+L+IF +G D V+WNT+++AC++
Sbjct: 434 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISACVRFGD 493
Query: 486 AGEVLRLTKRMLASHIRPDHVTLTNVLVSSGQIASFEVGSQVHCFIMKSGLNLDTSVSNA 545
L++T +M S + PD T L +A+ +G ++HC +++ G + + NA
Sbjct: 494 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 553
Query: 546 LINMYTKCGSLGSARKMFDSIDTPDIISWSSLIVGYAQAGCGEEAFKLFRTMRGLGVKPN 605
LI MY+KCG L ++ ++F+ + D+++W+ +I Y G GE+A + F M G+ P+
Sbjct: 554 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPD 613
Query: 606 EITFVGILTACSHIGMVEEGLKLYRTMQEEDGISPTREHCSCMVDLLARAGCFDGAEGFI 665
+ F+ I+ ACSH G+V+EGL + M+ I P EH +C+VDLL+R+ AE FI
Sbjct: 614 SVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 673
Query: 666 KQMPFDPDVVVWKTLLAACRVHGNLEVGKRAAEIVLKTDPSNSAALVMLCNIHASSGHWN 725
+ MP PD +W ++L ACR G++E +R + +++ +P + ++ N +A+ W+
Sbjct: 674 QAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWD 733
Query: 726 DLARLRSSMRQMDVSKVPGQSWIEIKDRVHVFFAEDSLHPERGRIYTMLEELMLQVLDDS 785
++ +R S++ ++K PG SWIE+ VHVF + D P+ IY LE L + +
Sbjct: 734 KVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEG 792
Query: 786 FDP 789
+ P
Sbjct: 794 YIP 792
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LFI1 | 2.1e-255 | 57.86 | Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidop... | [more] |
| Q9SVA5 | 1.6e-130 | 34.95 | Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana OX... | [more] |
| Q9SS83 | 9.8e-128 | 34.64 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| Q5G1T1 | 3.7e-127 | 33.85 | Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... | [more] |
| Q9SS60 | 4.1e-126 | 32.37 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1G6A4 | 0.0e+00 | 89.73 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor... | [more] |
| A0A6J1KU81 | 0.0e+00 | 89.10 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor... | [more] |
| A0A6J1CVF9 | 0.0e+00 | 86.78 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 ... | [more] |
| A0A6J1F1S7 | 0.0e+00 | 86.46 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cuc... | [more] |
| A0A6J1J911 | 0.0e+00 | 86.06 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like OS=Cuc... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022947264.1 | 0.0e+00 | 89.73 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor... | [more] |
| XP_023005822.1 | 0.0e+00 | 89.10 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like isofor... | [more] |
| XP_038903429.1 | 0.0e+00 | 87.85 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 ... | [more] |
| XP_022145760.1 | 0.0e+00 | 86.78 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial isoform X1 ... | [more] |
| XP_023526527.1 | 0.0e+00 | 86.44 | pentatricopeptide repeat-containing protein At3g53360, mitochondrial [Cucurbita ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G53360.1 | 1.5e-256 | 57.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT4G39530.1 | 1.2e-131 | 34.95 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09040.1 | 7.0e-129 | 34.64 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G49170.1 | 2.7e-128 | 33.85 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G03580.1 | 2.9e-127 | 32.37 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
