Lcy06g020930 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g020930
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Glycosyltransferase
Location	Chr06: 45925666 .. 45928996 (-)
RNA-Seq Expression	Lcy06g020930
Synteny	Lcy06g020930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCTTAGAATCTGAATCTGTCGATGGATGGACGTCTCTTCGGTCGGGTCCATTTGAAGTTGGGAACATTTCTGAGATGAAAAATGTATTGGATTGTGGCTTTATGCAGCAACTTTCCGACAGAACATGGAGGTATTTGTTATTTGATAAATTATGACAACCTTAAAGAAATCTTTGCACACTTATTGTCGATGTGTTTGGTTCACCATTTAATAAATCTGAATGTGTATAGTTTAGGTCTGTTTAATAGTCATTTTGTTATTAGTATACATCTCAGACCATACAAATCAAACCTTACGAGCCGAACGTTCTCTTTACAAGAAATAAATTGGAGTTGGAGGGGGAAGAATCAATTTCCTGCAGCACTCAAACTTTTAACTTCATCCACTTTTACTTGTTTGTAAATTTTTTTTAAAAAAAAATCATCCACTTTTATCTGTAAAAAGGATATTATCTCAATTTATTAGTGTGTGTATATATATATATATGTATATGTATATGTATATATGTATGAATGTATGTATATGTATGTATGTATATTAAAATAGAAGTTTAAATGCTTTGGTGAAACATTTTAATTACTAATTAGTCTTCTTCTGAACAGTGCTTTTAAAAGAAGTATTTTTCACTTAAAATAGTTTTTTTTTCAAGACATCTTAGACTCGCTTTTAAGTAACTTGAGATGTCATATGATTGTCTAGCTAAGAAAATTGTAGCTATTTTAAAAGGAATTCACCAAACCAACCGTTTATCCACTGCATGCCAAGAGTTGGAAAATACTTGACTGTATATCGGTGTGTGTATCTTTCTATACACTACCATTAAAATGTTGACAAGTGTGAGGATAAGAATTTGTACCATAACTCATCTGACCTCCTAACAATATATCTAATTAATGGTGAAGTAGAAGAAATTCAATTGGTTATCATCGTATTTAGTAGATGTAAATAACAACACCCCTCTTAAACTAACAAGTGTTCCTTGTACTGGGAAGAGTTTCACCCCTTTCTTGGATGACCAGCAATCTCATTGGCACATAGAAAAAAGAAATAAATATTTCACTCGCTGAACCCACCCCATTTATTACAATGGTGGAAGAGCCTGAGAGAGAAAGATTGGACATTAAACCCCTCATGCTTTTGGACCCAAAATTTGGACAAATTATTTCAATGTAATTGTCTCTTAAAACCGGCATTGTCTCTTAAAACCGATTTTTAAATTTGTCTGCTCTTAATAACTGTTGATACAAAATTGAGTACTATTACAATTTCTTTCTTACATCCAAAGTTAAATGACATCGCACACCCCATTTGTCCATAAATATTCAAAGAAGCCAAGATGAAAGATCTCCATTCTAGCGATGGACAGTGGTTCCTTCGAGCCTCAGCCTCACTTCATTCTAATCCCTCTCATGTCCCAGGCAAACAGATTTCGATGATTAACATGGCGAAGCTTCTTGCCCACCACAACCCCTTCACTCCCAATCAATCGTCGCCCGCTCTGCTAACTTTGACCTCTCCATCTCCCTTCCCACCATCCCCTTTTCTTTAGAGATGTCCATTTGCCCCGCGGGGACGGGCCCCGTGGGACCTGTCCCTAATGGGGTGGAGAATCTCCGTTTAAGCGGGGAATGGAGGAGGGAGTGGGGGAAAAAAATTCCCCGCGACCTAAACGGGGACGGTGATGGAGAATGTGTTCCCCATCTCCGTTCTCTGTCCTGTTTATTTTTTTTTTAATTATTAGTATTATTATTATTATTATTGTTTCTCCCTATATATAAATTTAAAGTGTTATTATTAATGATTTAGAAAATTGGAAATGTTTGAATTATATGGTTTAAACATTTGAATTATAATGTATAGATAATTAGATAGTTTGATATGAAATATAATTTTGTTTATAATAGGAGATTTAATAATTTTTTCTTTTAAAAAAAATATTTTTTTAAGAAAATCAACCGTTTAAATGAAAATTTTATGTGAATAATTAACTATCTAATTGAAAATTAATGAATATTTTCCATGTAAAGTTAACTATTTAAAAATTTATCAAAAGAATTATTTGATTCAATGGAGATAAAAAAAAAAGAAAAAAAATTAAATTTGGAATAATTCCCCACAAATTCCCCGCGGGGAATCCCCACTCCATTACCCGCAAAATTTAACGGAGAATTTTGTGGGGATGTGGATTGAAATGGGAGGTGAGGACGGGGACGGGGAAGCCATCCCCACCCCCGTCCCTGCCCTGCCCCGTGGACATCCCTACCTCCCTTGGCACCAGGCTGGCCTCCTTCACACTTGCGAAAACGTCAGACTCCCTCCCTCCTCGTTCCTTCATCAGAAACTTCTACTTAGCCTCAACCTTACTGCAACACCCATCCGAATACCTTTTTCAAACTCCACATCCTCCTCCGACTTGCATTGTTTCTGGCAAGAATCTCGCCAAACCCATTGGTGCGTTCCTCACGCATTGTGGCTGGATCTCCGTGCTTGAAGGTGCTCTTAAATTCACCACTAAACTCAAAAGTTTAAGTAGAGAAATCGTAATATGTTGTTTGATATGGTAAATTGAAGAATCTTTTGTTTATATTTTTAGCAGGGTTGACAGTAGGCGTACCAACACTAATGTTGAGGATCCCAATTTGAAAAGATAAGTAGATACCTTACAACTTATAAGATACATGGATCAAACAAAAGCATGAGAGGTGCGTGAAATGGGGGATGCATCAAACTAGGGGTGAAAACGGGTCGGGTCGGGTTTCCATAAAAATCAACCCGACCTGACACAAGTCAGTTTTAACTCTGAGTAAACCGACCCAACCCGATTAGAATCGGGTCGGTTTGACGCGTAATGCCAGAAATCAAATAGAAAAGAAAAAAACGAAAAATGCAAGAAGAAAACTAGCACCAAAACTTGATCGAAAATCAGAATACTCAGTTCTGTCCTCATCCAATACTCACAGACTATTCAAGGAAAAAAACATGGAACCAATCACTTGAATACTCACAGAATATTCAAGGTAAGGAACCCTAGATGCAAAAATCAGAAGAAGAGCAATCCTAGATGCAAAAATTAGAAGAAGAAAAAACAAAAGTAAAGAAAATCAACCCCAGATGCGAAAATAAGAAGAAACAAAATCGAAAATCAAGAACCGCGGGAGATTGACGTCGTTCGTGGAGGAGGCGGCGGTGGGAAGGAGTCGATGCCGTTCGTTTCGTGGTGGAGGAGGCGGCGATGAGAAGGAGTCGACGCCGTTCGTTTCGTGGTGGAGGAGACGGCGGTCGAAGAAAAGAATCGTTTCGTGTTCGTTACTTCGCTTTGTGCTTTGA

mRNA sequence

ATGGTCTTAGAATCTGAATCTGTCGATGGATGGACGTCTCTTCGGTCGGGTCCATTTGAAGTTGGGAACATTTCTGAGATGAAAAATGTATTGGATTGTGGCTTTATGCAGCAACTTTCCGACAGAACATGGAGGCTGGCCTCCTTCACACTTGCGAAAACGTCAGACTCCCTCCCTCCTCGTTCCTTCATCAGAAACTTCTACTTAGCCTCAACCTTACTGCAACACCCATCCGAATACCTTTTTCAAACTCCACATCCTCCTCCGACTTGCATTGTTTCTGGCAAGAATCTCGCCAAACCCATTGGTGCGTTCCTCACGCATTGTGGCTGGATCTCCGTGCTTGAAGAAACAAAATCGAAAATCAAGAACCGCGGGAGATTGACGTCGTTCGTGGAGGAGGCGGCGGTGGGAAGGAGTCGATGCCGTTCGTTTCGTGGTGGAGGAGGCGGCGATGAGAAGGAGTCGACGCCGTTCGTTTCGTGGTGGAGGAGACGGCGGTCGAAGAAAAGAATCGTTTCGTGTTCGTTACTTCGCTTTGTGCTTTGA

Coding sequence (CDS)

ATGGTCTTAGAATCTGAATCTGTCGATGGATGGACGTCTCTTCGGTCGGGTCCATTTGAAGTTGGGAACATTTCTGAGATGAAAAATGTATTGGATTGTGGCTTTATGCAGCAACTTTCCGACAGAACATGGAGGCTGGCCTCCTTCACACTTGCGAAAACGTCAGACTCCCTCCCTCCTCGTTCCTTCATCAGAAACTTCTACTTAGCCTCAACCTTACTGCAACACCCATCCGAATACCTTTTTCAAACTCCACATCCTCCTCCGACTTGCATTGTTTCTGGCAAGAATCTCGCCAAACCCATTGGTGCGTTCCTCACGCATTGTGGCTGGATCTCCGTGCTTGAAGAAACAAAATCGAAAATCAAGAACCGCGGGAGATTGACGTCGTTCGTGGAGGAGGCGGCGGTGGGAAGGAGTCGATGCCGTTCGTTTCGTGGTGGAGGAGGCGGCGATGAGAAGGAGTCGACGCCGTTCGTTTCGTGGTGGAGGAGACGGCGGTCGAAGAAAAGAATCGTTTCGTGTTCGTTACTTCGCTTTGTGCTTTGA

Protein sequence

MVLESESVDGWTSLRSGPFEVGNISEMKNVLDCGFMQQLSDRTWRLASFTLAKTSDSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLAKPIGAFLTHCGWISVLEETKSKIKNRGRLTSFVEEAAVGRSRCRSFRGGGGGDEKESTPFVSWWRRRRSKKRIVSCSLLRFVL

Homology

[Close]

BLAST of Lcy06g020930 vs. ExPASy TrEMBL
Match: A5BA41 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_041696 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 8.6e-06
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           D LP RS IRNF++A+++LQ P E LFQ   P P+CI+SGKNLA
Sbjct: 86  DLLPSRSLIRNFFVAASMLQQPLEQLFQELQPXPSCIISGKNLA 129

[Close]

BLAST of Lcy06g020930 vs. ExPASy TrEMBL
Match: A0A438EJS2 (Glycosyltransferase OS=Vitis vinifera OX=29760 GN=UGT73C3_3 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-05
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           D LP RS IRNF++A+++LQ P E LFQ   P P+CI+SGKNLA
Sbjct: 86  DLLPSRSLIRNFFVAASMLQQPLEQLFQELQPRPSCIISGKNLA 129

[Close]

BLAST of Lcy06g020930 vs. ExPASy TrEMBL
Match: A0A6P4AQ47 (Glycosyltransferase OS=Ziziphus jujuba OX=326968 GN=LOC107432014 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 5.6e-05
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           D+LP R+ I+NF++AS++LQ P E L     PPP+CIVSGKNLA
Sbjct: 96  DNLPSRTLIKNFFIASSMLQKPFEDLLLGLQPPPSCIVSGKNLA 139

[Close]

BLAST of Lcy06g020930 vs. ExPASy TrEMBL
Match: A0A6N2BNM8 (Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_007605 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-04
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           DSLP R  IR+F+LA+++LQ P E LF   +P P CI+SGKN+A
Sbjct: 86  DSLPSRDSIRDFFLAASILQEPFEELFSDLNPRPCCIISGKNMA 129

[Close]

BLAST of Lcy06g020930 vs. ExPASy TrEMBL
Match: A0A5J4ZGZ1 (Glycosyltransferase OS=Nyssa sinensis OX=561372 GN=F0562_016893 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.8e-04
Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           DSLP R+ I NF++A+++LQ P E +F    P P+CI+SGKNLA
Sbjct: 86  DSLPSRNLIPNFFVAASMLQQPFEQVFDELQPRPSCIISGKNLA 129

[Close]

BLAST of Lcy06g020930 vs. NCBI nr
Match: CAN83017.1 (hypothetical protein VITISV_041696 [Vitis vinifera])

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-05
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           D LP RS IRNF++A+++LQ P E LFQ   P P+CI+SGKNLA
Sbjct: 86  DLLPSRSLIRNFFVAASMLQQPLEQLFQELQPXPSCIISGKNLA 129

[Close]

BLAST of Lcy06g020930 vs. NCBI nr
Match: XP_019077179.1 (PREDICTED: UDP-glycosyltransferase 73C3 [Vitis vinifera])

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-05
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           D LP RS IRNF++A+++LQ P E LFQ   P P+CI+SGKNLA
Sbjct: 86  DLLPSRSLIRNFFVAASMLQQPLEQLFQELQPRPSCIISGKNLA 129

[Close]

BLAST of Lcy06g020930 vs. NCBI nr
Match: XP_034693657.1 (UDP-glycosyltransferase 73C3-like isoform X1 [Vitis riparia])

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-05
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           D LP RS IRNF++A+++LQ P E LFQ   P P+CI+SGKNLA
Sbjct: 86  DLLPSRSLIRNFFVAASMLQQPLEQLFQELQPRPSCIISGKNLA 129

[Close]

BLAST of Lcy06g020930 vs. NCBI nr
Match: RVW47974.1 (UDP-glycosyltransferase 73C3 [Vitis vinifera])

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-05
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           D LP RS IRNF++A+++LQ P E LFQ   P P+CI+SGKNLA
Sbjct: 86  DLLPSRSLIRNFFVAASMLQQPLEQLFQELQPRPSCIISGKNLA 129

[Close]

BLAST of Lcy06g020930 vs. NCBI nr
Match: XP_028087945.1 (UDP-glycosyltransferase 73C3-like [Camellia sinensis] >XP_028087946.1 UDP-glycosyltransferase 73C3-like [Camellia sinensis])

HSP 1 Score: 58.2 bits (139), Expect = 8.8e-05
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 56  DSLPPRSFIRNFYLASTLLQHPSEYLFQTPHPPPTCIVSGKNLA 100
           DSLP RS I++F++AS++LQ P E  F    PPP+CI+SGKNLA
Sbjct: 91  DSLPSRSSIKSFFVASSMLQKPFEEAFHELKPPPSCIISGKNLA 134

The following BLAST results are available for this feature:

BLAST of Lcy06g020930 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g020930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5BA41	8.6e-06	61.36	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_041696 PE=3 SV=1	[more]
A0A438EJS2	1.1e-05	61.36	Glycosyltransferase OS=Vitis vinifera OX=29760 GN=UGT73C3_3 PE=3 SV=1	[more]
A0A6P4AQ47	5.6e-05	59.09	Glycosyltransferase OS=Ziziphus jujuba OX=326968 GN=LOC107432014 PE=3 SV=1	[more]
A0A6N2BNM8	2.1e-04	56.82	Uncharacterized protein OS=Solanum chilense OX=4083 GN=EJD97_007605 PE=4 SV=1	[more]
A0A5J4ZGZ1	2.8e-04	54.55	Glycosyltransferase OS=Nyssa sinensis OX=561372 GN=F0562_016893 PE=3 SV=1	[more]

BLAST of Lcy06g020930 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN83017.1	1.8e-05	61.36	hypothetical protein VITISV_041696 [Vitis vinifera]	[more]
XP_019077179.1	2.3e-05	61.36	PREDICTED: UDP-glycosyltransferase 73C3 [Vitis vinifera]	[more]
XP_034693657.1	2.3e-05	61.36	UDP-glycosyltransferase 73C3-like isoform X1 [Vitis riparia]	[more]
RVW47974.1	2.3e-05	61.36	UDP-glycosyltransferase 73C3 [Vitis vinifera]	[more]
XP_028087945.1	8.8e-05	59.09	UDP-glycosyltransferase 73C3-like [Camellia sinensis] >XP_028087946.1 UDP-glycos...	[more]

BLAST of Lcy06g020930 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g020930.1	Lcy06g020930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008194	UDP-glycosyltransferase activity