Lcy06g020740 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g020740
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	golgin subfamily A member 6-like protein 22
Location	Chr06: 45597051 .. 45599676 (+)
RNA-Seq Expression	Lcy06g020740
Synteny	Lcy06g020740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAACCAAAGTTGATTCAACTGGAAGAAATTCCCCAGGCCTTAAAAGAAAGTTTCAAAGCCACGGAATCGTTAAAAAAAGCAAAGGATAATCCCCTTAACATATTGGTAAAGAATCTTTTACCCATTTTGATCAAGAAAAGTTCAAAAATTGTCTCAATTCTCAATTCATTTTCAAACAACAAACAAATCTAGTAGAGACAAAGGAATTATACCACATCTACGAGCTACAGTGTCGAGAGTTTGAATCCTTCCAACCCACGATCGGCCAATAAGGGAAGGACTTTTATGAAAACGACGTGATATTCAAGGCGACCAACCGAAACCAACCGAGCCGATTTTTCGATGGCAAGTACATCTTCGAAAACTGGGAATTCGGAGCCAATGCACTTGAAAATTGGCATTCCTTTAGTTCTATCAGCAGCAGGTGGAGCATGTGCCATAATGATGGCAAGAGGTTCATTTCCAGCTTCCTTAAATCCTTTCAAACCCAAATCAAAACTCATTAAAGTTGAGAACTTTCACAGTCAGAATCACTCAGCTCCACTTTCTTTGGAGGAAGAAGGAATTTCAGAAACTGAGGGACAAAAACCCAATGTTGAGGAAGTGCTTTTAAGCTTAAAAAACAGAGTTGAAGATCTTGAAAGAAAAGAATTGGACATAGAGAAGCAGTTCATTTGGTACCAAAATTTGAAAGAGAGGGAAGCTTTGCTGGTGGAGCTGAGGAACACTTTGGTTTTGGATATGGCTCATATCAGTTTCTTGGAAAAGGAGATTTTGTTGATGGAAGAAGAAAACAAAAGGTTTGAGAGTTTGGTGACTGAATATTTGGGAGTTTCAGAGCAGCTTGAAGGTCAAAAAACAGAAAACAAGTTACTTGAGAGAGAAGTGAAGAAACTCAAGAAGAGATTGAAGGAACAATCAAAGATCATAAGAGAGAAGAGTTTGAAGGTTGAAGAAAGTAAAAAGGAAATTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATCATAGAAAAGTTGGAGAATGAAGTAAGAGAGCTGAAAATGCAAATGAATCAATTGCAAGAGGAGGAGAACAGAGATTCATCCTCATTCAAGGTTTCATCTTTCTTTCTTTTTTCTCCATTCAATTTTGTCTAGTTCTTGCGTATGTGTCTAATAGGTCTCTAAACATTAAAAATGTAAAATAGGTCTTTAAGGTCTCGATTGATTACCATTTGATTTTTGAAAATTAATTCTTGTTTTCTCCCAATTTCATTTTCACATTTGTTAAGTACAGGTTTGAATTCCTAACCAAATTCTAAAAACAAAAATAAGTTTTTTGAAACTACTTTTTTTTAGTTTTCCAAAATTGGTTGGGTTTTTGAAAATATGAGAAAAGGTAGATAAAAAATAAAGAAACTTTTAAGTGGAAGTAGTGTTTGATTTTCGGAAACAAAAAATCAAATGGTTATCAAACGGAACTGAAAACTTGTAATTTTATGTCTAGTAATTTATTGATATATTCAAAATTAACGAATCTATTAGGCATAAAATTGAATTTTGCGTCTAAGTGTTCGTGAATTTTAAAAAATGTTGTATATGCTAAAGACTTATTAGAGACATAAAAATGAAAATTTAGGAATTTATTATATACAAATTTGAAAGTTGAGGAACTTATTAGATACTTTTTAAAGTTTAAAGATCTATTAGACAAAAATTTAATAGTTCAAAAATCTATTAGATACTTTTTAAAATTCAAGACCTATTTGACACAAACGATCAAGTTTCATGAACTTATAATTTAACATTTTATCTTTACTTGCCTTACCTATTAAAAAAAAGTCCTTGAACTTTTGATTTTGAATCAAACCCATATCTAAAATTTATGAATGTTTCTATAAAGAGAAGATTCATAAAGCTATTTTTAAATTATTGATTCAATCTTGAACCTTTTTAGTCCATGAGGATTTGCCTTTTGAACTTTGTTTAAAAGAATATCATTTCGAGGGAGATATCGTTCTTATCTAGTAACTCATGAATATGATTATTTTCACTCCTAATCGATGTAAAACTTTGATCGTACCCATGACAATACGTTGAAATCGGGTATTTGGCTAAATCGTAAGGTTTCTTGATTTGCAGATTGAAGAAGAAAAACCAGTAACAATAGAGGATTTCAACAAGCTTTCAAATGAATTCAATCAGTTGAAAGAGGCATTTGAGTTATTAAGAAAGCATGAACAAGAACAGCAAGACCAGAAAGAAACTGATGAGGAAAAAGAAATAAATCATAAAGATTTGGATAAAAATGAATCCTTATCTGATAAAACTAAATGCCCAAGGCCAAAGCTTCTTCAAAGGATAAGCTGTGTTGGGAGTAATGAAAAGATGAAAAGAAAAATTAGACCACAATAAGAAGAAAGCATCACAAAGCTTCAATCTTGGAATTCTTTTCAATTTGTATTTGGGCAAAAATGTAACTAACTCCATTTAATGTGAATTGCTTTCTAAATTATGACATTCTCAAAATTGGCTGTCAATTATCTTTGTATTAGTCTGTTTTTGTTTTGTTCCTTGGATGAAGAAATAATTTCATTGTAATTGTGAATTTGGGTTATAAAAAAGGTTAAATTATTAA

mRNA sequence

TAAAAACCAAAGTTGATTCAACTGGAAGAAATTCCCCAGGCCTTAAAAGAAAGTTTCAAAGCCACGGAATCGTTAAAAAAAGCAAAGGATAATCCCCTTAACATATTGGTAAAGAATCTTTTACCCATTTTGATCAAGAAAAGTTCAAAAATTGTCTCAATTCTCAATTCATTTTCAAACAACAAACAAATCTAGTAGAGACAAAGGAATTATACCACATCTACGAGCTACAGTGTCGAGAGTTTGAATCCTTCCAACCCACGATCGGCCAATAAGGGAAGGACTTTTATGAAAACGACGTGATATTCAAGGCGACCAACCGAAACCAACCGAGCCGATTTTTCGATGGCAAGTACATCTTCGAAAACTGGGAATTCGGAGCCAATGCACTTGAAAATTGGCATTCCTTTAGTTCTATCAGCAGCAGGTGGAGCATGTGCCATAATGATGGCAAGAGGTTCATTTCCAGCTTCCTTAAATCCTTTCAAACCCAAATCAAAACTCATTAAAGTTGAGAACTTTCACAGTCAGAATCACTCAGCTCCACTTTCTTTGGAGGAAGAAGGAATTTCAGAAACTGAGGGACAAAAACCCAATGTTGAGGAAGTGCTTTTAAGCTTAAAAAACAGAGTTGAAGATCTTGAAAGAAAAGAATTGGACATAGAGAAGCAGTTCATTTGGTACCAAAATTTGAAAGAGAGGGAAGCTTTGCTGGTGGAGCTGAGGAACACTTTGGTTTTGGATATGGCTCATATCAGTTTCTTGGAAAAGGAGATTTTGTTGATGGAAGAAGAAAACAAAAGGTTTGAGAGTTTGGTGACTGAATATTTGGGAGTTTCAGAGCAGCTTGAAGGTCAAAAAACAGAAAACAAGTTACTTGAGAGAGAAGTGAAGAAACTCAAGAAGAGATTGAAGGAACAATCAAAGATCATAAGAGAGAAGAGTTTGAAGGTTGAAGAAAGTAAAAAGGAAATTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATCATAGAAAAGTTGGAGAATGAAGTAAGAGAGCTGAAAATGCAAATGAATCAATTGCAAGAGGAGGAGAACAGAGATTCATCCTCATTCAAGATTGAAGAAGAAAAACCAGTAACAATAGAGGATTTCAACAAGCTTTCAAATGAATTCAATCAGTTGAAAGAGGCATTTGAGTTATTAAGAAAGCATGAACAAGAACAGCAAGACCAGAAAGAAACTGATGAGGAAAAAGAAATAAATCATAAAGATTTGGATAAAAATGAATCCTTATCTGATAAAACTAAATGCCCAAGGCCAAAGCTTCTTCAAAGGATAAGCTGTGTTGGGAGTAATGAAAAGATGAAAAGAAAAATTAGACCACAATAAGAAGAAAGCATCACAAAGCTTCAATCTTGGAATTCTTTTCAATTTGTATTTGGGCAAAAATGTAACTAACTCCATTTAATGTGAATTGCTTTCTAAATTATGACATTCTCAAAATTGGCTGTCAATTATCTTTGTATTAGTCTGTTTTTGTTTTGTTCCTTGGATGAAGAAATAATTTCATTGTAATTGTGAATTTGGGTTATAAAAAAGGTTAAATTATTAA

Coding sequence (CDS)

ATGGCAAGTACATCTTCGAAAACTGGGAATTCGGAGCCAATGCACTTGAAAATTGGCATTCCTTTAGTTCTATCAGCAGCAGGTGGAGCATGTGCCATAATGATGGCAAGAGGTTCATTTCCAGCTTCCTTAAATCCTTTCAAACCCAAATCAAAACTCATTAAAGTTGAGAACTTTCACAGTCAGAATCACTCAGCTCCACTTTCTTTGGAGGAAGAAGGAATTTCAGAAACTGAGGGACAAAAACCCAATGTTGAGGAAGTGCTTTTAAGCTTAAAAAACAGAGTTGAAGATCTTGAAAGAAAAGAATTGGACATAGAGAAGCAGTTCATTTGGTACCAAAATTTGAAAGAGAGGGAAGCTTTGCTGGTGGAGCTGAGGAACACTTTGGTTTTGGATATGGCTCATATCAGTTTCTTGGAAAAGGAGATTTTGTTGATGGAAGAAGAAAACAAAAGGTTTGAGAGTTTGGTGACTGAATATTTGGGAGTTTCAGAGCAGCTTGAAGGTCAAAAAACAGAAAACAAGTTACTTGAGAGAGAAGTGAAGAAACTCAAGAAGAGATTGAAGGAACAATCAAAGATCATAAGAGAGAAGAGTTTGAAGGTTGAAGAAAGTAAAAAGGAAATTTGGAGAAATAATGAAGAAATGGAAACAAAGAAAAAGATCATAGAAAAGTTGGAGAATGAAGTAAGAGAGCTGAAAATGCAAATGAATCAATTGCAAGAGGAGGAGAACAGAGATTCATCCTCATTCAAGATTGAAGAAGAAAAACCAGTAACAATAGAGGATTTCAACAAGCTTTCAAATGAATTCAATCAGTTGAAAGAGGCATTTGAGTTATTAAGAAAGCATGAACAAGAACAGCAAGACCAGAAAGAAACTGATGAGGAAAAAGAAATAAATCATAAAGATTTGGATAAAAATGAATCCTTATCTGATAAAACTAAATGCCCAAGGCCAAAGCTTCTTCAAAGGATAAGCTGTGTTGGGAGTAATGAAAAGATGAAAAGAAAAATTAGACCACAATAA

Protein sequence

MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASLNPFKPKSKLIKVENFHSQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKEREALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLEREVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQMNQLQEEENRDSSSFKIEEEKPVTIEDFNKLSNEFNQLKEAFELLRKHEQEQQDQKETDEEKEINHKDLDKNESLSDKTKCPRPKLLQRISCVGSNEKMKRKIRPQ

Homology

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BLAST of Lcy06g020740 vs. ExPASy TrEMBL
Match: A0A1S3B6H9 (trichohyalin OS=Cucumis melo OX=3656 GN=LOC103486552 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 1.1e-121
Identity = 259/346 (74.86%), Postives = 298/346 (86.13%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASLNPFKPKSKLIKVENFH 60
           MA+TSSKTGN EPM LK+GIPL LSAAGG C IMMA+GSFP+SLNPFKP+SK++K ENFH
Sbjct: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSLNPFKPRSKIMKNENFH 89

Query: 61  SQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKERE 120
           S +    +SLEEE  S+      NVEEV+LSLK RVEDLERKELDIE+QF+WYQNLKERE
Sbjct: 90  SSS----ISLEEEKTSQL-----NVEEVILSLKGRVEDLERKELDIERQFVWYQNLKERE 149

Query: 121 ALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER 180
           ALLVELRNTLVLDMAHI+FLE+EILLMEEENKRFE+LVTEYLGVSEQLEGQKTENKLLER
Sbjct: 150 ALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLER 209

Query: 181 EVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQM-N 240
           EVK+LKKRLKEQSK+IREK+LK+E+SK ++WRNNEEMETKKKIIE+L NEV ELKMQM  
Sbjct: 210 EVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGR 269

Query: 241 QLQEEENRDSSSFKIEEEKPVTIEDFNKLSNEFNQLKEAFELLRK--HEQEQQDQKETDE 300
           QL+EE+N+D S+ KIE EK VT++D NKLSNEFNQLK+ FE+ RK   EQEQQ QKE  +
Sbjct: 270 QLEEEKNQDLSTPKIETEKLVTMDDLNKLSNEFNQLKDEFEVFRKQEQEQEQQGQKENPK 329

Query: 301 EKEINHKDLDKNESLSDKTKCPRPKLLQRISCVGSNEKMKRKIRPQ 344
           ++E N+K LD+NE  SD+T   RPKLLQRISCV  NEKMKRK RP+
Sbjct: 330 KEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMKRKTRPE 366

[Close]

BLAST of Lcy06g020740 vs. ExPASy TrEMBL
Match: A0A0A0LB83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748180 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.7e-111
Identity = 241/346 (69.65%), Postives = 288/346 (83.24%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASLNPFKPKSKLIKVENFH 60
           MA+TSSKTGN EPM  K+GIPL +SAAGG C IMMA+GSFP+SLN FKPKSKL++ ENF 
Sbjct: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60

Query: 61  SQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKERE 120
                 P S+  E   E +  +PN EEV+LSLK RVEDLE KELDIE+QFIWYQNLKERE
Sbjct: 61  ------PSSITSE---EEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKERE 120

Query: 121 ALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER 180
           ALLVELRNTLVLDMAHI+FLE+EILLM EEN+RFE+LVTEYLGVSEQLEGQKTENKLLER
Sbjct: 121 ALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLER 180

Query: 181 EVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQM-N 240
           EV+KLKKRLKEQSK+IREK+LK+E+SK ++WRNNEEMETKKK+IE+L NEV+ELK+QM +
Sbjct: 181 EVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKIQMDH 240

Query: 241 QLQEEENRDSSSFKIEEEKPVTIEDFNKLSNEFNQLKEAFELLRKHEQEQQD--QKETDE 300
           QL+EE N++  + K   EK VT+ED NKLSNEFNQLK+ FE+ RK EQEQ+   QKE  +
Sbjct: 241 QLEEENNQNLCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPK 300

Query: 301 EKEINHKDLDKNESLSDKTKCPRPKLLQRISCVGSNEKMKRKIRPQ 344
           ++E ++K L++NES SD+T   RPKLL+R+ CV  NEKMKRK RP+
Sbjct: 301 KEERDNKALNQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 337

[Close]

BLAST of Lcy06g020740 vs. ExPASy TrEMBL
Match: A0A6J1CU83 (golgin subfamily A member 6-like protein 22 OS=Momordica charantia OX=3673 GN=LOC111014337 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 2.2e-111
Identity = 248/361 (68.70%), Postives = 291/361 (80.61%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASL-----NPFKPKSKLIK 60
           M +T+SK GN EPM  KIGIPL LSAA   CAI+M+RG FPAS+     N  KPKSKL +
Sbjct: 1   MVNTTSKLGNFEPMLYKIGIPLALSAASSVCAIIMSRGGFPASIYKSKTNLLKPKSKLKE 60

Query: 61  VENFHSQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQN 120
            EN HSQN +  LSLEEE  S +E +   +EEV+  L+ RVEDLE+KE++IE+QFIWYQN
Sbjct: 61  NENLHSQNSANSLSLEEEESSSSESE-DRIEEVISGLRRRVEDLEKKEVEIERQFIWYQN 120

Query: 121 LKEREALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTEN 180
           LKERE+LLVELRNTLVLDMAHISFLE+EILLMEEENK+FESLV+EYLGVSEQLEGQK+EN
Sbjct: 121 LKERESLLVELRNTLVLDMAHISFLEREILLMEEENKKFESLVSEYLGVSEQLEGQKSEN 180

Query: 181 KLLEREVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELK 240
           KLL+REVKKL+K+LKEQSKIIREK+LK+EE K E+WRN EEMETKKK+IEKL NEVRELK
Sbjct: 181 KLLDREVKKLRKKLKEQSKIIREKNLKIEEIKAEVWRNGEEMETKKKVIEKLGNEVRELK 240

Query: 241 MQMNQLQEEENRDSSSFKIE-EEKPVTIEDFNKLSNEFNQLKEAFE---LLRKHEQEQQD 300
           MQ+ +LQEEENR S+ FK+E +E+ VT+EDFNKLSNEF QLK+AF    L R H+QE+Q+
Sbjct: 241 MQLEELQEEENRASAKFKVEADERSVTVEDFNKLSNEFKQLKDAFSKQGLSRNHDQEEQN 300

Query: 301 QKETDEE--------KEINHKDLDKNESLSDKTKCPRPKLLQRISCV-GSNEKMKRKIRP 344
            KE  EE        +EI  K+LDKNE  S KT   RPKLL RISCV GSNEKM+RKIRP
Sbjct: 301 HKEIHEEVEGNEGVKQEIKGKNLDKNEFSSVKTNSTRPKLLPRISCVGGSNEKMERKIRP 360

[Close]

BLAST of Lcy06g020740 vs. ExPASy TrEMBL
Match: A0A6J1KUK1 (coiled-coil domain-containing protein 186 OS=Cucurbita maxima OX=3661 GN=LOC111498800 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 2.5e-99
Identity = 242/373 (64.88%), Postives = 277/373 (74.26%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGG-ACAIMMARGSFPASLNPFKPKSKLIKVENF 60
           MA+T+SK  NSE   LKIGIPL LSAAGG  C IMMAR SFP SLNPFK  S+L+K E+F
Sbjct: 1   MANTTSKLENSEQTLLKIGIPLALSAAGGVCCGIMMARSSFP-SLNPFKRISQLVKNESF 60

Query: 61  HSQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKER 120
            SQNHSAPL L+++  S      PN+EEVLL LKNRVEDLERKEL IEKQFIWYQNLKE+
Sbjct: 61  DSQNHSAPLPLKQKETS------PNIEEVLLGLKNRVEDLERKELGIEKQFIWYQNLKEK 120

Query: 121 EALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLE 180
           EALL+EL+NTLVLDMAHI FLEKEILLMEEENKRFESLVTEYLGVSEQ EGQK EN+LLE
Sbjct: 121 EALLMELKNTLVLDMAHIRFLEKEILLMEEENKRFESLVTEYLGVSEQFEGQKPENRLLE 180

Query: 181 REVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQMN 240
           REVKKLKKRLK+QSK+IREK+LK+EES+ E WRNNEEME KK++IEKL NE+RELKMQM 
Sbjct: 181 REVKKLKKRLKDQSKMIREKNLKIEESRTEFWRNNEEMERKKRMIEKLRNELRELKMQM- 240

Query: 241 QLQEEENRDSSSFKIEEEKPVTIEDFNKLS---NEFNQLKEAFELLRK------------ 300
              E     SS FKIEEEK VT++D +KLS   +E  Q +   +L +K            
Sbjct: 241 ---ENNASSSSPFKIEEEKEVTMKDVSKLSIGNHEQEQKENHKDLDQKESSPDKTTRPKL 300

Query: 301 -----------HEQEQQDQKETDEEKEINHKDLDKNESLSDKTKCPRPKLLQRISCVGSN 344
                      HEQEQ++QKE       NHKDL + ES  DKTK  RP+LL+RIS  GS+
Sbjct: 301 TEDVNKLSIGNHEQEQEEQKE-------NHKDLAQKESSPDKTKYTRPRLLRRISDSGSS 355

[Close]

BLAST of Lcy06g020740 vs. ExPASy TrEMBL
Match: A0A6J1G4S6 (nucleoporin GLE1-like OS=Cucurbita moschata OX=3662 GN=LOC111450790 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 3.1e-97
Identity = 239/376 (63.56%), Postives = 275/376 (73.14%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGG-ACAIMMARGSFPASLNPFKPKSKLIKVENF 60
           M +T+SK  N EP  LKIGIPL LSAAGG  C IMMAR SFP SLNP K  SKLIK ENF
Sbjct: 1   MMNTTSKPENLEPTLLKIGIPLALSAAGGVCCGIMMARSSFP-SLNPLKRISKLIKNENF 60

Query: 61  HSQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKER 120
            SQNHSAPL L+++  S      PN+EEV L LKNRVEDLERKEL IEKQFIWYQNLKE+
Sbjct: 61  DSQNHSAPLPLKQKETS------PNIEEVFLGLKNRVEDLERKELGIEKQFIWYQNLKEK 120

Query: 121 EALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLE 180
           EALL+EL+NTLVLDMAHI FLEKEILLMEEENKRFESLVTEYLGVSE+ EGQK EN+LL 
Sbjct: 121 EALLMELKNTLVLDMAHIRFLEKEILLMEEENKRFESLVTEYLGVSEKFEGQKPENRLLG 180

Query: 181 REVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQMN 240
           REVKK+KKRLKEQSK+IREK+LK+EES+ E WRNNEEME KK++IEKL NE+R+LK+QM 
Sbjct: 181 REVKKVKKRLKEQSKMIREKNLKIEESRTEFWRNNEEMERKKRMIEKLRNELRDLKIQM- 240

Query: 241 QLQEEENRDSSSFKIEEEKPVTIEDFNKLS-----NEFNQLKEAFELLRK---------- 300
             +   +  SSSFKIEEEK VT++D +KLS      E  + KE  + L +          
Sbjct: 241 --ENNASSSSSSFKIEEEKEVTMKDVSKLSIGNHEQEQQEQKENHKDLDQKESSPDKTTR 300

Query: 301 --------------HEQEQQDQKETDEEKEINHKDLDKNESLSDKTKCPRPKLLQRISCV 344
                         HEQEQQ+Q+E  E    NHKDL + ES  DKTK  RP+LL+RIS  
Sbjct: 301 PKLTEDVNKLSIGNHEQEQQEQQEQKE----NHKDLAQKESSPDKTKSTRPRLLRRISDS 360

[Close]

BLAST of Lcy06g020740 vs. NCBI nr
Match: XP_038904867.1 (myosin-10 [Benincasa hispida])

HSP 1 Score: 487.3 bits (1253), Expect = 1.1e-133
Identity = 270/343 (78.72%), Postives = 306/343 (89.21%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASLNPFKPKSKLIKVENFH 60
           MA+TSSKT N  PM LK+GIPL +SAAGG CAIMMA+GSFP SLN FKPKSKL+K ENFH
Sbjct: 1   MANTSSKTDNLGPMFLKVGIPLAISAAGGICAIMMAKGSFPTSLNLFKPKSKLMKNENFH 60

Query: 61  SQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKERE 120
           S NHS+ +S EEE I ETEG+KPNVEEV+LS+K RVEDLERKELDIE+QFIWYQNLKERE
Sbjct: 61  SHNHSSSISFEEEEILETEGEKPNVEEVILSIKGRVEDLERKELDIERQFIWYQNLKERE 120

Query: 121 ALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER 180
           ALLVEL+NTL+LD+AHI+FLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER
Sbjct: 121 ALLVELKNTLLLDIAHINFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER 180

Query: 181 EVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQMNQ 240
           EVKKLKKRLK+QSKIIREK+LK+E+SK ++WRNNEEMETKK++IEKL  EV+ELKMQM+Q
Sbjct: 181 EVKKLKKRLKDQSKIIREKNLKIEDSKTQLWRNNEEMETKKRMIEKLGKEVKELKMQMDQ 240

Query: 241 LQEEENRDSSSFKIEEEKPVTIEDFNKLSNEFNQLKEAFELLRKHEQEQQDQKETDEEKE 300
           LQE++N+  S+ KIEEEK VT+EDFNKLS E NQLK+AFE+ +K EQEQQ QKE  +E E
Sbjct: 241 LQEDKNKALSTSKIEEEKSVTMEDFNKLSTELNQLKDAFEVFKKQEQEQQGQKENPKEGE 300

Query: 301 INHKDLDKNESLSDKTKCPRPKLLQRISCVGSNEKMKRKIRPQ 344
            NHK LD+NES SDKT   RPKLLQRISCVG NEKMKRKIRP+
Sbjct: 301 RNHKALDQNESSSDKTNSTRPKLLQRISCVGGNEKMKRKIRPE 343

[Close]

BLAST of Lcy06g020740 vs. NCBI nr
Match: XP_008442774.1 (PREDICTED: trichohyalin [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 2.2e-121
Identity = 259/346 (74.86%), Postives = 298/346 (86.13%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASLNPFKPKSKLIKVENFH 60
           MA+TSSKTGN EPM LK+GIPL LSAAGG C IMMA+GSFP+SLNPFKP+SK++K ENFH
Sbjct: 30  MANTSSKTGNFEPMFLKVGIPLALSAAGGICGIMMAKGSFPSSLNPFKPRSKIMKNENFH 89

Query: 61  SQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKERE 120
           S +    +SLEEE  S+      NVEEV+LSLK RVEDLERKELDIE+QF+WYQNLKERE
Sbjct: 90  SSS----ISLEEEKTSQL-----NVEEVILSLKGRVEDLERKELDIERQFVWYQNLKERE 149

Query: 121 ALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER 180
           ALLVELRNTLVLDMAHI+FLE+EILLMEEENKRFE+LVTEYLGVSEQLEGQKTENKLLER
Sbjct: 150 ALLVELRNTLVLDMAHINFLEREILLMEEENKRFENLVTEYLGVSEQLEGQKTENKLLER 209

Query: 181 EVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQM-N 240
           EVK+LKKRLKEQSK+IREK+LK+E+SK ++WRNNEEMETKKKIIE+L NEV ELKMQM  
Sbjct: 210 EVKRLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKIIERLGNEVNELKMQMGR 269

Query: 241 QLQEEENRDSSSFKIEEEKPVTIEDFNKLSNEFNQLKEAFELLRK--HEQEQQDQKETDE 300
           QL+EE+N+D S+ KIE EK VT++D NKLSNEFNQLK+ FE+ RK   EQEQQ QKE  +
Sbjct: 270 QLEEEKNQDLSTPKIETEKLVTMDDLNKLSNEFNQLKDEFEVFRKQEQEQEQQGQKENPK 329

Query: 301 EKEINHKDLDKNESLSDKTKCPRPKLLQRISCVGSNEKMKRKIRPQ 344
           ++E N+K LD+NE  SD+T   RPKLLQRISCV  NEKMKRK RP+
Sbjct: 330 KEERNNKALDQNELSSDETNSTRPKLLQRISCVRGNEKMKRKTRPE 366

[Close]

BLAST of Lcy06g020740 vs. NCBI nr
Match: XP_004138000.1 (interaptin [Cucumis sativus] >KGN59038.1 hypothetical protein Csa_002657 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 3.5e-111
Identity = 241/346 (69.65%), Postives = 288/346 (83.24%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASLNPFKPKSKLIKVENFH 60
           MA+TSSKTGN EPM  K+GIPL +SAAGG C IMMA+GSFP+SLN FKPKSKL++ ENF 
Sbjct: 1   MANTSSKTGNFEPMFFKVGIPLAISAAGGICGIMMAKGSFPSSLNFFKPKSKLMENENFQ 60

Query: 61  SQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKERE 120
                 P S+  E   E +  +PN EEV+LSLK RVEDLE KELDIE+QFIWYQNLKERE
Sbjct: 61  ------PSSITSE---EEKTSQPNAEEVILSLKTRVEDLESKELDIERQFIWYQNLKERE 120

Query: 121 ALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLER 180
           ALLVELRNTLVLDMAHI+FLE+EILLM EEN+RFE+LVTEYLGVSEQLEGQKTENKLLER
Sbjct: 121 ALLVELRNTLVLDMAHINFLEREILLMGEENRRFENLVTEYLGVSEQLEGQKTENKLLER 180

Query: 181 EVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQM-N 240
           EV+KLKKRLKEQSK+IREK+LK+E+SK ++WRNNEEMETKKK+IE+L NEV+ELK+QM +
Sbjct: 181 EVRKLKKRLKEQSKMIREKNLKIEDSKSQLWRNNEEMETKKKMIERLGNEVKELKIQMDH 240

Query: 241 QLQEEENRDSSSFKIEEEKPVTIEDFNKLSNEFNQLKEAFELLRKHEQEQQD--QKETDE 300
           QL+EE N++  + K   EK VT+ED NKLSNEFNQLK+ FE+ RK EQEQ+   QKE  +
Sbjct: 241 QLEEENNQNLCTIKNGTEKAVTMEDLNKLSNEFNQLKDEFEVFRKQEQEQEQEGQKENPK 300

Query: 301 EKEINHKDLDKNESLSDKTKCPRPKLLQRISCVGSNEKMKRKIRPQ 344
           ++E ++K L++NES SD+T   RPKLL+R+ CV  NEKMKRK RP+
Sbjct: 301 KEERDNKALNQNESSSDETNYTRPKLLRRMGCVRGNEKMKRKTRPE 337

[Close]

BLAST of Lcy06g020740 vs. NCBI nr
Match: XP_022144716.1 (golgin subfamily A member 6-like protein 22 [Momordica charantia])

HSP 1 Score: 412.1 bits (1058), Expect = 4.5e-111
Identity = 248/361 (68.70%), Postives = 291/361 (80.61%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASL-----NPFKPKSKLIK 60
           M +T+SK GN EPM  KIGIPL LSAA   CAI+M+RG FPAS+     N  KPKSKL +
Sbjct: 1   MVNTTSKLGNFEPMLYKIGIPLALSAASSVCAIIMSRGGFPASIYKSKTNLLKPKSKLKE 60

Query: 61  VENFHSQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQN 120
            EN HSQN +  LSLEEE  S +E +   +EEV+  L+ RVEDLE+KE++IE+QFIWYQN
Sbjct: 61  NENLHSQNSANSLSLEEEESSSSESE-DRIEEVISGLRRRVEDLEKKEVEIERQFIWYQN 120

Query: 121 LKEREALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTEN 180
           LKERE+LLVELRNTLVLDMAHISFLE+EILLMEEENK+FESLV+EYLGVSEQLEGQK+EN
Sbjct: 121 LKERESLLVELRNTLVLDMAHISFLEREILLMEEENKKFESLVSEYLGVSEQLEGQKSEN 180

Query: 181 KLLEREVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELK 240
           KLL+REVKKL+K+LKEQSKIIREK+LK+EE K E+WRN EEMETKKK+IEKL NEVRELK
Sbjct: 181 KLLDREVKKLRKKLKEQSKIIREKNLKIEEIKAEVWRNGEEMETKKKVIEKLGNEVRELK 240

Query: 241 MQMNQLQEEENRDSSSFKIE-EEKPVTIEDFNKLSNEFNQLKEAFE---LLRKHEQEQQD 300
           MQ+ +LQEEENR S+ FK+E +E+ VT+EDFNKLSNEF QLK+AF    L R H+QE+Q+
Sbjct: 241 MQLEELQEEENRASAKFKVEADERSVTVEDFNKLSNEFKQLKDAFSKQGLSRNHDQEEQN 300

Query: 301 QKETDEE--------KEINHKDLDKNESLSDKTKCPRPKLLQRISCV-GSNEKMKRKIRP 344
            KE  EE        +EI  K+LDKNE  S KT   RPKLL RISCV GSNEKM+RKIRP
Sbjct: 301 HKEIHEEVEGNEGVKQEIKGKNLDKNEFSSVKTNSTRPKLLPRISCVGGSNEKMERKIRP 360

[Close]

BLAST of Lcy06g020740 vs. NCBI nr
Match: XP_023005942.1 (coiled-coil domain-containing protein 186 [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 5.2e-99
Identity = 242/373 (64.88%), Postives = 277/373 (74.26%), Query Frame = 0


Query: 1   MASTSSKTGNSEPMHLKIGIPLVLSAAGG-ACAIMMARGSFPASLNPFKPKSKLIKVENF 60
           MA+T+SK  NSE   LKIGIPL LSAAGG  C IMMAR SFP SLNPFK  S+L+K E+F
Sbjct: 1   MANTTSKLENSEQTLLKIGIPLALSAAGGVCCGIMMARSSFP-SLNPFKRISQLVKNESF 60

Query: 61  HSQNHSAPLSLEEEGISETEGQKPNVEEVLLSLKNRVEDLERKELDIEKQFIWYQNLKER 120
            SQNHSAPL L+++  S      PN+EEVLL LKNRVEDLERKEL IEKQFIWYQNLKE+
Sbjct: 61  DSQNHSAPLPLKQKETS------PNIEEVLLGLKNRVEDLERKELGIEKQFIWYQNLKEK 120

Query: 121 EALLVELRNTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLE 180
           EALL+EL+NTLVLDMAHI FLEKEILLMEEENKRFESLVTEYLGVSEQ EGQK EN+LLE
Sbjct: 121 EALLMELKNTLVLDMAHIRFLEKEILLMEEENKRFESLVTEYLGVSEQFEGQKPENRLLE 180

Query: 181 REVKKLKKRLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQMN 240
           REVKKLKKRLK+QSK+IREK+LK+EES+ E WRNNEEME KK++IEKL NE+RELKMQM 
Sbjct: 181 REVKKLKKRLKDQSKMIREKNLKIEESRTEFWRNNEEMERKKRMIEKLRNELRELKMQM- 240

Query: 241 QLQEEENRDSSSFKIEEEKPVTIEDFNKLS---NEFNQLKEAFELLRK------------ 300
              E     SS FKIEEEK VT++D +KLS   +E  Q +   +L +K            
Sbjct: 241 ---ENNASSSSPFKIEEEKEVTMKDVSKLSIGNHEQEQKENHKDLDQKESSPDKTTRPKL 300

Query: 301 -----------HEQEQQDQKETDEEKEINHKDLDKNESLSDKTKCPRPKLLQRISCVGSN 344
                      HEQEQ++QKE       NHKDL + ES  DKTK  RP+LL+RIS  GS+
Sbjct: 301 TEDVNKLSIGNHEQEQEEQKE-------NHKDLAQKESSPDKTKYTRPRLLRRISDSGSS 355

[Close]

BLAST of Lcy06g020740 vs. TAIR 10
Match: AT2G36650.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-24
Identity = 84/272 (30.88%), Postives = 160/272 (58.82%), Query Frame = 0


Query: 9   GNSEPMHLKIGIPLVLSAAGGACAIMMARGSFPASLNPFKPKSKLIKVENFHSQNHSAPL 68
           G  +P+ L++ + +VLSA G   A  ++R            +   +     + ++ S+P 
Sbjct: 11  GAMKPVILRVCVAIVLSATGLILARFVSRN-----------EDNEVTSSTSNPESSSSP- 70

Query: 69  SLEEEGISETEGQKPNVE-EVLLSLKNRVEDLERKELDIEKQFIWYQNLKEREALLVELR 128
               E   E E + PN + + +LSLK+R E+L+RKE ++E  F  + NLK++E +L+E +
Sbjct: 71  --SRENDEEEEAESPNQQKQEILSLKSRFEELQRKEYEMELHFERFCNLKDQEVMLIEHK 130

Query: 129 NTLVLDMAHISFLEKEILLMEEENKRFESLVTEYLGVSEQLEGQKTENKLLEREVKKLKK 188
           + L L+ A + F  KE+L MEEE+KR ++LV  YL +  +++  ++EN LLE + KKL++
Sbjct: 131 SILSLEKAQLDFFRKEVLAMEEEHKRGQALVIVYLKLVGEIQELRSENGLLEGKAKKLRR 190

Query: 189 RLKEQSKIIREKSLKVEESKKEIWRNNEEMETKKKIIEKLENEVRELKMQMNQLQEEENR 248
           + K+  +++ E S K+   +KE  +  +E+ETK  I+++LE +V++++  ++ LQEE+  
Sbjct: 191 KSKQLYRVVNE-SRKIIGVEKEFLKCVDELETKNNIVKELEGKVKDMEAYVDVLQEEKEE 250

Query: 249 DSSSFKIEEEKPVTIEDFNKLSNEFNQLKEAF 280
                     + V++ED+ ++  E+ +LK+ +
Sbjct: 251 LFMKSSNSTSEMVSVEDYRRIVEEYEELKKDY 267

The following BLAST results are available for this feature:

BLAST of Lcy06g020740 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g020740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6H9	1.1e-121	74.86	trichohyalin OS=Cucumis melo OX=3656 GN=LOC103486552 PE=4 SV=1	[more]
A0A0A0LB83	1.7e-111	69.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748180 PE=4 SV=1	[more]
A0A6J1CU83	2.2e-111	68.70	golgin subfamily A member 6-like protein 22 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1KUK1	2.5e-99	64.88	coiled-coil domain-containing protein 186 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1G4S6	3.1e-97	63.56	nucleoporin GLE1-like OS=Cucurbita moschata OX=3662 GN=LOC111450790 PE=4 SV=1	[more]

BLAST of Lcy06g020740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904867.1	1.1e-133	78.72	myosin-10 [Benincasa hispida]	[more]
XP_008442774.1	2.2e-121	74.86	PREDICTED: trichohyalin [Cucumis melo]	[more]
XP_004138000.1	3.5e-111	69.65	interaptin [Cucumis sativus] >KGN59038.1 hypothetical protein Csa_002657 [Cucumi...	[more]
XP_022144716.1	4.5e-111	68.70	golgin subfamily A member 6-like protein 22 [Momordica charantia]	[more]
XP_023005942.1	5.2e-99	64.88	coiled-coil domain-containing protein 186 [Cucurbita maxima]	[more]

BLAST of Lcy06g020740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36650.1	4.5e-24	30.88	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..109
None	No IPR available	COILS	Coil	Coil	coord: 137..157
None	No IPR available	COILS	Coil	Coil	coord: 210..247
None	No IPR available	COILS	Coil	Coil	coord: 168..202
None	No IPR available	COILS	Coil	Coil	coord: 265..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..322
None	No IPR available	PANTHER	PTHR31342:SF10	CHUP1-LIKE PROTEIN	coord: 1..289
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..31 score: 5.0
IPR040265	Protein CHUP1-like	PANTHER	PTHR31342	PROTEIN CHUP1, CHLOROPLASTIC	coord: 1..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g020740.1	Lcy06g020740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0016021	integral component of membrane