Lcy06g020620 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGGAGGTGTCAGAAAGTTCCAGCACCCACCGCTGCCCACACCTTTCCAGTACCTTCCAGTCTCTCCTTCATCCCTCCATTTAAATCCTCAAAACCCTAAATTCCACATTCCCAAATCTGATCGATTCCACTTCCAAATTCCACAATTCTGCAACAGAAAAGAGAAAAATCATGAAGCCGATCGACGACAAGAAGGACAAAGTGACGATCCGAGCGGTGAGCCGCGACGAGGAAGGGAAAAAGCGAGTCGAAAAGACCGAGATCGACACTCACAACATCGACACCATCAAGTACGTCGAGAAGAAGCTCATCGACAAGGGAGTTCAGCGGCTCGACCGCCATCCGGTCCACGGCCGGGCCGGAATCTCCCAGCCGCCGCCGAAGTCCGGCCGCGGCGGGAAGTTCACTTGGGAGGGACCGGGCGATGCGATCGAGAACGAGCTCTCGCCGGCGCCGGCGGCTATAGATGAGAAGGATCCGAACTACGTGGATGAAGAGAAGGAGGAGGAGGTCGCCGGAATGGTCATCGGAGAAGTGGAGGTGCCGAAGGCGGCGGCGGCGGCGGCGAGAGAGGGAGTTTCGAGAGTGGAGGTGGATCCGCAGATTCAATTACAATGAAATGAAATAGGGTTTGTGTTGAGTTGTGTTTCTGTAATTAGCTGTGAGTTTGGGGTCTTTTTAATTTCTGTTTGAATTTTGTTGTGCTGAGAATGGCAAAGAAAGGTTTTTTTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTT GAAAGGAGGTGTCAGAAAGTTCCAGCACCCACCGCTGCCCACACCTTTCCAGTACCTTCCAGTCTCTCCTTCATCCCTCCATTTAAATCCTCAAAACCCTAAATTCCACATTCCCAAATCTGATCGATTCCACTTCCAAATTCCACAATTCTGCAACAGAAAAGAGAAAAATCATGAAGCCGATCGACGACAAGAAGGACAAAGTGACGATCCGAGCGGTGAGCCGCGACGAGGAAGGGAAAAAGCGAGTCGAAAAGACCGAGATCGACACTCACAACATCGACACCATCAAGTACGTCGAGAAGAAGCTCATCGACAAGGGAGTTCAGCGGCTCGACCGCCATCCGGTCCACGGCCGGGCCGGAATCTCCCAGCCGCCGCCGAAGTCCGGCCGCGGCGGGAAGTTCACTTGGGAGGGACCGGGCGATGCGATCGAGAACGAGCTCTCGCCGGCGCCGGCGGCTATAGATGAGAAGGATCCGAACTACGTGGATGAAGAGAAGGAGGAGGAGGTCGCCGGAATGGTCATCGGAGAAGTGGAGGTGCCGAAGGCGGCGGCGGCGGCGGCGAGAGAGGGAGTTTCGAGAGTGGAGGTGGATCCGCAGATTCAATTACAATGAAATGAAATAGGGTTTGTGTTGAGTTGTGTTTCTGTAATTAGCTGTGAGTTTGGGGTCTTTTTAATTTCTGTTTGAATTTTGTTGTGCTGAGAATGGCAAAGAAAGGTTTTTTTTTTCTTTTTTCTTTTTTCTTTTTTCTTTTT ATGAAGCCGATCGACGACAAGAAGGACAAAGTGACGATCCGAGCGGTGAGCCGCGACGAGGAAGGGAAAAAGCGAGTCGAAAAGACCGAGATCGACACTCACAACATCGACACCATCAAGTACGTCGAGAAGAAGCTCATCGACAAGGGAGTTCAGCGGCTCGACCGCCATCCGGTCCACGGCCGGGCCGGAATCTCCCAGCCGCCGCCGAAGTCCGGCCGCGGCGGGAAGTTCACTTGGGAGGGACCGGGCGATGCGATCGAGAACGAGCTCTCGCCGGCGCCGGCGGCTATAGATGAGAAGGATCCGAACTACGTGGATGAAGAGAAGGAGGAGGAGGTCGCCGGAATGGTCATCGGAGAAGTGGAGGTGCCGAAGGCGGCGGCGGCGGCGGCGAGAGAGGGAGTTTCGAGAGTGGAGGTGGATCCGCAGATTCAATTACAATGA MKPIDDKKDKVTIRAVSRDEEGKKRVEKTEIDTHNIDTIKYVEKKLIDKGVQRLDRHPVHGRAGISQPPPKSGRGGKFTWEGPGDAIENELSPAPAAIDEKDPNYVDEEKEEEVAGMVIGEVEVPKAAAAAAREGVSRVEVDPQIQLQ Homology
BLAST of Lcy06g020620 vs. ExPASy TrEMBL
Match: A0A0A0LDV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G748780 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 9.6e-64 Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of Lcy06g020620 vs. ExPASy TrEMBL
Match: A0A5A7TM42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003410 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 126/150 (84.00%), Postives = 138/150 (92.00%), Query Frame = 0
BLAST of Lcy06g020620 vs. ExPASy TrEMBL
Match: A0A1S3B6J5 (uncharacterized protein LOC103486565 OS=Cucumis melo OX=3656 GN=LOC103486565 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 126/150 (84.00%), Postives = 138/150 (92.00%), Query Frame = 0
BLAST of Lcy06g020620 vs. ExPASy TrEMBL
Match: A0A6J1F9T7 (uncharacterized protein LOC111442115 OS=Cucurbita moschata OX=3662 GN=LOC111442115 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 5.8e-61 Identity = 127/148 (85.81%), Postives = 134/148 (90.54%), Query Frame = 0
BLAST of Lcy06g020620 vs. ExPASy TrEMBL
Match: A0A6J1J6Y7 (uncharacterized protein LOC111481791 OS=Cucurbita maxima OX=3661 GN=LOC111481791 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 5.5e-59 Identity = 126/149 (84.56%), Postives = 134/149 (89.93%), Query Frame = 0
BLAST of Lcy06g020620 vs. NCBI nr
Match: XP_004137866.1 (uncharacterized protein LOC101207081 [Cucumis sativus] >KGN59049.1 hypothetical protein Csa_002138 [Cucumis sativus]) HSP 1 Score: 252.7 bits (644), Expect = 2.0e-63 Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of Lcy06g020620 vs. NCBI nr
Match: XP_008442790.1 (PREDICTED: uncharacterized protein LOC103486565 [Cucumis melo] >KAA0043928.1 uncharacterized protein E6C27_scaffold236G002680 [Cucumis melo var. makuwa] >TYK25211.1 uncharacterized protein E5676_scaffold352G003410 [Cucumis melo var. makuwa]) HSP 1 Score: 245.4 bits (625), Expect = 3.2e-61 Identity = 126/150 (84.00%), Postives = 138/150 (92.00%), Query Frame = 0
BLAST of Lcy06g020620 vs. NCBI nr
Match: XP_023528786.1 (uncharacterized protein LOC111791618 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 244.6 bits (623), Expect = 5.4e-61 Identity = 127/148 (85.81%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of Lcy06g020620 vs. NCBI nr
Match: XP_022935160.1 (uncharacterized protein LOC111442115 [Cucurbita moschata] >KAG6580661.1 hypothetical protein SDJN03_20663, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 243.4 bits (620), Expect = 1.2e-60 Identity = 127/148 (85.81%), Postives = 134/148 (90.54%), Query Frame = 0
BLAST of Lcy06g020620 vs. NCBI nr
Match: XP_038904411.1 (uncharacterized protein LOC120090774 [Benincasa hispida]) HSP 1 Score: 240.7 bits (613), Expect = 7.8e-60 Identity = 125/149 (83.89%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of Lcy06g020620 vs. TAIR 10
Match: AT3G10020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 47 Blast hits to 47 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 1.2e-29 Identity = 72/146 (49.32%), Postives = 100/146 (68.49%), Query Frame = 0
BLAST of Lcy06g020620 vs. TAIR 10
Match: AT3G10020.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 111.7 bits (278), Expect = 5.1e-25 Identity = 60/124 (48.39%), Postives = 85/124 (68.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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