Lcy06g020530 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g020530
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibosome production factor 2 homolog
LocationChr06: 45385548 .. 45388339 (+)
RNA-Seq ExpressionLcy06g020530
SyntenyLcy06g020530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCCCCCAAAAACCCTAGTGTTAAAGACGCCTATTCCAAAAAGCCCACCAAAATCGGCGTCAGAGCTTGCAGTCGCCGGAAGTATCTCCATTTGAGCTACAAAACCCTAACTTTTCAATCGCATCTCCGTCATCTTGTCGGCCGTGGATCATGTTGAAAGTCAGAACTCCCAAGAATGGGAAAGTTAAACGGGAGCTCGAGAAACGCGCTCCCAAACTTGTAAGTTCTTCCATTCCCGAGTCTGTATCTCTCCATGCGTGTGCGTAATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTATTTATAGAGATTAAGAGTTTCTATGGAATGATTAAAAGCTCGTTGAAGAAGTTTGTATGGTTTTTTAGTTGTTTTTTTCTTTTTCTTTGTAATGATCCCGAGTCTGGTTGTCAATTTGAACCGCAGGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGCACAAAAACGAGCGGCGTGTTGAATGAAGTATTGACGGAAATTTATCACCTGAAGAAAGAAAGTGCCGTGAAGTATTCTCGTAAGAATGAAGGAATTAAACCATTTGAAAGTGGCGGCGATGCGTCTTTGGAATTTTTCTCTCTTAAAACTGATTGCAGTATTATCGTGGTGTGTACAACTGTGAATGCTTAGTATTTTAGACATCTTAGTTTATTTACTTGGCTTAATGTCTTGGAGCTCTGCAGTGGGTACCTGTTTAAGCTTTGTATTTGATTTTACAATTCAGTTTTTCCATCCGAAGGCAGCTTCTCTACCCTTCATCACAAAGGAGTTATTTGATTTAAAATTAGCTCTAGCCGTGTAGAACTTCGTCTAAGACTTTGATTTTTTTGGATGAGCTCTTCTAGTTTTTCCCTAAATTGTTTTTAGATGTCTCAAATGGTCGAAGAACTTAGCAGTCCTCAAACAGATGAACCCATGTAAAAAAAACATAATCTTGATGTGCGTTTTTTTGGGTAAGTTGAGCCAGTTAGAACTTTGAGATCTTCAACTTAAGGGACATCCTGTTTTGTTAATAGGCAAACCTCCCGTCTAGTCTTTATGGGTTCAAGTTCTGTATCTCTTTTCCTCTGTTATTATAGAATATGAGAGCAGGTAGATTGCTTCATTCATAACATGTCCATGAAAAAAAGTAAACAGCTTCTATGTCCCCAGTTATTTATTGATGTATTTATTGCACCTCTTTTGCAGTATGGTTCTCACTCAAAGAAACGACCAGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACTTAATTGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCTTTCACATATGATAAGAAACTATCTCCACGTGTGGGGTCAAAGCCTTTCATTACTTTCATTGGCGAAGGATTTGAGAATGTGGAAGAGCTAAAGCATTTAAAGGAAGTTTTGCTTGATTTATTCCGGGGAGAGGTAAAAACCCTGCAGCTTTGGCTGACTTTAGTGTGAATGTTTAGATATTAAAGATATCTGTGGTCTTTGCAGGTCGTTGAGAATATAAATCTTGCTGGGTTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTTCAGTAGTTCCAAGAATGGAACTAGTTGAAGTTGGTCCTTCAATGGATATGGTGGTTCGCCGGCACCGACTTCCTAGTGATGGCCTAAGGAAGGAAGCCATGAAAACAGCCAAGGATCATGCTAAGAAGAAGGTTTTAATGGCTATCTTTTAACTGAATGCGCGTCACTTTGTTTATTAAGCTGTTTGTCTAATCTTGATGTTTAATTCTTCCAGGAGAAAAACGTTAGCCAGGATGCAATTCAAGGCAAGATCGGAAGGATATATATTCCTGATCAAAAGGTATCTCTCTCTCTGTATGTGTTTTCTTGTTGGTTGGAGAAAGGGCTTGGTACTGTCACAATCCTTTCATGTCCCGCTGAGATTGAAAATGGTTCATGTTATCAAACTCTTCTCTTGTCATGTTTATCACCAAAATAGCAACATCATTACTTCACCTGGTAGATATTTGTCAGTCATTTGAATAACTTGATACTAAATTTTGGCTCATAGGTTGGAGATATGGCTCTACCCAACAAATCAAAGGGAGTGAAGAGAGAACGACGTGAAGCGAAAATGAAAAATAGAGATGATGGGCCAGCCTCAAAAAAACCAAAAGAAGATTCAGAAAAACCAAAAGAAGATTCGGAATAGTTCAACCAGTGTGATTGTTTGATCCAATTCTCCTCTTGCTAACTTGAGTCACTGTTGTGAAATGCATAATGGCAAGCCAATTATGTGGAGAGAGCAGACAAATTATTTACTTATATACAATTTTGTCTTTGGTCTTCAATTTGATTCTTTACATGCAAGCCTACCTATTATCATCTTAACCATTCAGGTTTTGCAGAGTTTGACTGTGAATCTCATTGCAAGCACAATGTTCCTTCAAGATTAGTTGTGGGAAAGGTATCTAAATACGTGTATTGTTTCTGTTATATATCTATTTTCCTCTTAAGCATGGAGTGATTTGAAAAACTAGCTATTTATGTCTATGGTTGTGTTAGGGATGTGTGTAAAGCAACCACTGCCCTTGATTACAATCGATGTGCACCTCATCCTACCAGAACCTAGAAGTTCCTGAAGGAGCCAATGGAAGTCACTATGAGTACCATTTAGCTTTTGATTTTTGAAAATTGTGGTAGTTTTCTTCCAATTTTTTT

mRNA sequence

TCTTCCCCCAAAAACCCTAGTGTTAAAGACGCCTATTCCAAAAAGCCCACCAAAATCGGCGTCAGAGCTTGCAGTCGCCGGAAGTATCTCCATTTGAGCTACAAAACCCTAACTTTTCAATCGCATCTCCGTCATCTTGTCGGCCGTGGATCATGTTGAAAGTCAGAACTCCCAAGAATGGGAAAGTTAAACGGGAGCTCGAGAAACGCGCTCCCAAACTTGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGCACAAAAACGAGCGGCGTGTTGAATGAAGTATTGACGGAAATTTATCACCTGAAGAAAGAAAGTGCCGTGAAGTATTCTCGTAAGAATGAAGGAATTAAACCATTTGAAAGTGGCGGCGATGCGTCTTTGGAATTTTTCTCTCTTAAAACTGATTGCAGTATTATCGTGTATGGTTCTCACTCAAAGAAACGACCAGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACTTAATTGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCTTTCACATATGATAAGAAACTATCTCCACGTGTGGGGTCAAAGCCTTTCATTACTTTCATTGGCGAAGGATTTGAGAATGTGGAAGAGCTAAAGCATTTAAAGGAAGTTTTGCTTGATTTATTCCGGGGAGAGGTCGTTGAGAATATAAATCTTGCTGGGTTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTTCAGTAGTTCCAAGAATGGAACTAGTTGAAGTTGGTCCTTCAATGGATATGGTGGTTCGCCGGCACCGACTTCCTAGTGATGGCCTAAGGAAGGAAGCCATGAAAACAGCCAAGGATCATGCTAAGAAGAAGGAGAAAAACGTTAGCCAGGATGCAATTCAAGGCAAGATCGGAAGGATATATATTCCTGATCAAAAGGTTGGAGATATGGCTCTACCCAACAAATCAAAGGGAGTGAAGAGAGAACGACGTGAAGCGAAAATGAAAAATAGAGATGATGGGCCAGCCTCAAAAAAACCAAAAGAAGATTCAGAAAAACCAAAAGAAGATTCGGAATAGTTCAACCAGTGTGATTGTTTGATCCAATTCTCCTCTTGCTAACTTGAGTCACTGTTGTGAAATGCATAATGGCAAGCCAATTATGTGGAGAGAGCAGACAAATTATTTACTTATATACAATTTTGTCTTTGGTCTTCAATTTGATTCTTTACATGCAAGCCTACCTATTATCATCTTAACCATTCAGGTTTTGCAGAGTTTGACTGTGAATCTCATTGCAAGCACAATGTTCCTTCAAGATTAGTTGTGGGAAAGGGATGTGTGTAAAGCAACCACTGCCCTTGATTACAATCGATGTGCACCTCATCCTACCAGAACCTAGAAGTTCCTGAAGGAGCCAATGGAAGTCACTATGAGTACCATTTAGCTTTTGATTTTTGAAAATTGTGGTAGTTTTCTTCCAATTTTTTT

Coding sequence (CDS)

ATGTTGAAAGTCAGAACTCCCAAGAATGGGAAAGTTAAACGGGAGCTCGAGAAACGCGCTCCCAAACTTGTAGAAACGGGGAAGAAGACGCTGATACTTCATGGCACAAAAACGAGCGGCGTGTTGAATGAAGTATTGACGGAAATTTATCACCTGAAGAAAGAAAGTGCCGTGAAGTATTCTCGTAAGAATGAAGGAATTAAACCATTTGAAAGTGGCGGCGATGCGTCTTTGGAATTTTTCTCTCTTAAAACTGATTGCAGTATTATCGTGTATGGTTCTCACTCAAAGAAACGACCAGATAACCTTGTCATAGGGAGAACCTATGATCACCACATCTATGACTTAATTGAGGTTGGGATTGAAAATTTCAAGTCAATGCATTCTTTCACATATGATAAGAAACTATCTCCACGTGTGGGGTCAAAGCCTTTCATTACTTTCATTGGCGAAGGATTTGAGAATGTGGAAGAGCTAAAGCATTTAAAGGAAGTTTTGCTTGATTTATTCCGGGGAGAGGTCGTTGAGAATATAAATCTTGCTGGGTTGGACCGTGTATATGTATGTACAGCCATCTCACCAAATAAAGTATTTCTCACTCATTGTGCATTGCGATTGAAGAAGTCAGGTTCAGTAGTTCCAAGAATGGAACTAGTTGAAGTTGGTCCTTCAATGGATATGGTGGTTCGCCGGCACCGACTTCCTAGTGATGGCCTAAGGAAGGAAGCCATGAAAACAGCCAAGGATCATGCTAAGAAGAAGGAGAAAAACGTTAGCCAGGATGCAATTCAAGGCAAGATCGGAAGGATATATATTCCTGATCAAAAGGTTGGAGATATGGCTCTACCCAACAAATCAAAGGGAGTGAAGAGAGAACGACGTGAAGCGAAAATGAAAAATAGAGATGATGGGCCAGCCTCAAAAAAACCAAAAGAAGATTCAGAAAAACCAAAAGAAGATTCGGAATAG

Protein sequence

MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKYSRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINLAGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLRKEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKNRDDGPASKKPKEDSEKPKEDSE
Homology
[Close]
BLAST of Lcy06g020530 vs. ExPASy Swiss-Prot
Match: Q9LUG5 (Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g23620 PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 6.2e-129
Identity = 228/315 (72.38%), Postives = 272/315 (86.35%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           M+++RTPK GK KR LE RAPKLVETGKKTLILHGTKTS  L+ V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+NE I+PFESGG+ SLEFFS KTDCSI VYGSH+KKRPDNLV+GR YDH +YDLIEVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKS+ +F+YDKK +P  G+KPFI FIGEGFENV ELKHLKEVL DLFRGEVV+N+NL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
            GLDR YVC+AISP KVFLTHCAL+LKKSGS+VPRMELVEVGPSMD+V+RR+RLP+D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAM+T+KD  KKKEKNV QDA+ GK G+IY+PDQK+ +M L +KSKG KRER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 301 RDDGPASKKPKEDSE 316
           +++   +KK K  SE
Sbjct: 301 KEE-TVAKKMKVSSE 314

[Close]
BLAST of Lcy06g020530 vs. ExPASy Swiss-Prot
Match: Q9AWM9 (Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0513800 PE=2 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.3e-123
Identity = 221/312 (70.83%), Postives = 272/312 (87.18%), Query Frame = 0 

Query: 4   VRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKYSRK 63
           +R P++ + KREL K APKLVETGKKTLILHGTKTS VLN VL +++HLK+++AVKYS+K
Sbjct: 5   IRVPRSQRAKRELLKHAPKLVETGKKTLILHGTKTSAVLNSVLADLFHLKRDNAVKYSKK 64

Query: 64  NEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIEN 123
           N+ I+PFESGG+ SLEFFSLKTDCS+IVYGSHSKKRP+NLV+GRTYDHHIYDL+EVG+EN
Sbjct: 65  NDNIRPFESGGETSLEFFSLKTDCSLIVYGSHSKKRPNNLVLGRTYDHHIYDLVEVGVEN 124

Query: 124 FKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINLAGL 183
           +KS+ S+ YDKKL+P++GSKPF  FIGE FE+VEELKHLKEVLLDLF+GEVVEN+NLAG+
Sbjct: 125 YKSIESYVYDKKLAPKLGSKPFFAFIGEHFESVEELKHLKEVLLDLFKGEVVENLNLAGV 184

Query: 184 DRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLRKEA 243
           DRV+VCTAISP  V++ HCALRLK+SG+ +PR+ELVEVGPSMD+VVRRHR P + L+KEA
Sbjct: 185 DRVFVCTAISPTTVYMMHCALRLKRSGTSIPRIELVEVGPSMDLVVRRHRYPVESLKKEA 244

Query: 244 MKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKNRDD 303
           MKTA DHAKK  KNV++D + GK+G++YIPDQ++  M+L N  KG+KRERREAK KN+D 
Sbjct: 245 MKTA-DHAKKM-KNVTKDPVHGKLGKVYIPDQQIAKMSLSNDVKGLKRERREAK-KNKDH 304

Query: 304 GPASKKPKEDSE 316
              SKK K + E
Sbjct: 305 ---SKKQKINPE 310

[Close]
BLAST of Lcy06g020530 vs. ExPASy Swiss-Prot
Match: Q9JJ80 (Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 9.7e-58
Identity = 138/311 (44.37%), Postives = 190/311 (61.09%), Query Frame = 0 

Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKYSR 62
           KV  PK  + KR LEKR PKL E  K  +++ G   +  + +VL ++Y LKK   V Y +
Sbjct: 6   KVLKPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKK 65

Query: 63  KNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCS+ ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 123 NFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINLAG 182
            F S+      K   P  G+KP + F G+ F+  E+ + LK +L+D FRG  V N+ LAG
Sbjct: 126 KFVSLKDIKTSK--CPE-GTKPMLIFAGDDFDVTEDFRRLKNLLIDFFRGPTVSNVRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  KV+     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKVYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVMRRTHLASDDLYKL 245

Query: 243 AMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKNRD 302
           +MK  K    KK KN+SQD      GRI++  Q +  +    K KG+K  +R A+    D
Sbjct: 246 SMKVPKALKPKKRKNISQDTFGTTFGRIHMQKQDLSKLQ-TRKMKGLK--KRPAENGVDD 305

Query: 303 DGPASKKPKED 314
            G  SK+ K++
Sbjct: 306 QGKKSKRIKKN 306

[Close]
BLAST of Lcy06g020530 vs. ExPASy Swiss-Prot
Match: Q2YDN6 (Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.2e-57
Identity = 135/311 (43.41%), Postives = 191/311 (61.41%), Query Frame = 0 

Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKYSR 62
           +V  PK  + KR LEKR PKL E  K  +++ G   +  + +VL ++Y LKK   + Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLSENIKNAMLIKGGNANSTVTQVLRDVYALKKPYGILYKK 65

Query: 63  KNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCS+ ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDIIELGIE 125

Query: 123 NFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINLAG 182
            F S+      K   P  G+KP + F G+ F+  E+ + LK +L+D FRG  V NI LAG
Sbjct: 126 KFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 243 AMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKNRD 302
           +MK  K    KK+KN+S D      GRI++  Q +  +    K KG+K  +R A+ K  D
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLK--KRPAERKAED 305

Query: 303 DGPASKKPKED 314
           +   SK+ K++
Sbjct: 306 EENKSKRIKKN 306

[Close]
BLAST of Lcy06g020530 vs. ExPASy Swiss-Prot
Match: Q9H7B2 (Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 1.8e-56
Identity = 136/311 (43.73%), Postives = 190/311 (61.09%), Query Frame = 0 

Query: 3   KVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKYSR 62
           +V  PK  + KR LEKR PKL E  K  +++ G   +  + +VL ++Y LKK   V Y +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKK 65

Query: 63  KNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVGIE 122
           KN   +PFE     SLEFFS K+DCS+ ++GSH+KKRP+NLVIGR YD+H+ D+IE+GIE
Sbjct: 66  KNI-TRPFED--QTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGIE 125

Query: 123 NFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINLAG 182
           NF S+      K   P  G+KP + F G+ F+  E+ + LK +L+D FRG  V NI LAG
Sbjct: 126 NFVSLKDIKNSK--CPE-GTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAG 185

Query: 183 LDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLRKE 242
           L+ V   TA++  K++     L LKKSG   PR+EL E+GPS+D+V+RR  L SD L K 
Sbjct: 186 LEYVLHFTALN-GKIYFRSYKLLLKKSGCRTPRIELEEMGPSLDLVLRRTHLASDDLYKL 245

Query: 243 AMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKNRD 302
           +MK  K    KK+KN+S D      GRI++  Q +  +    K KG+K  +R A+    D
Sbjct: 246 SMKMPKALKPKKKKNISHDTFGTTYGRIHMQKQDLSKLQ-TRKMKGLK--KRPAERITED 305

Query: 303 DGPASKKPKED 314
               SK+ K++
Sbjct: 306 HEKKSKRIKKN 306

[Close]
BLAST of Lcy06g020530 vs. ExPASy TrEMBL
Match: A0A6J1KZU6 (Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498582 PE=3 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.7e-169
Identity = 309/321 (96.26%), Postives = 317/321 (98.75%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+NEGIKPFE+GGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVI RTYDHHIYDLIEVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLD+FRGEVVENINL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSGSVVPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAI GKIGRIYIPDQKVGD+ALP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDS 322
           RDD PASKKPKEDSEKPKEDS
Sbjct: 301 RDDMPASKKPKEDSEKPKEDS 321

[Close]
BLAST of Lcy06g020530 vs. ExPASy TrEMBL
Match: A0A6J1F357 (Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111441948 PE=3 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 4.8e-169
Identity = 306/322 (95.03%), Postives = 319/322 (99.07%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTSGVLN VLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKN+GIKPFESGGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAIQGKIGRIYIPDQKVGDMA+P+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           +DDGPASKKPKEDSEKPKE+SE
Sbjct: 301 KDDGPASKKPKEDSEKPKENSE 322

[Close]
BLAST of Lcy06g020530 vs. ExPASy TrEMBL
Match: A0A6J1J655 (Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697 PE=3 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.1e-168
Identity = 307/322 (95.34%), Postives = 319/322 (99.07%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTSGVLN VLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKN+GIKPFESGGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDH IYDLIEVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAIQGKIGRIYIPDQKVGDMA+P+KSKGVKRERREAKMK+
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKS 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           +DDGPASKKPKEDSEKPKE+SE
Sbjct: 301 KDDGPASKKPKEDSEKPKENSE 322

[Close]
BLAST of Lcy06g020530 vs. ExPASy TrEMBL
Match: A0A6J1FZZ6 (Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449459 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.1e-168
Identity = 307/322 (95.34%), Postives = 317/322 (98.45%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+NEGIKPFE+GGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVI RTYDHHIYDL+EVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLD+FRGEVVENINL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSGSVVPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAI GKIGRIYIPDQKVGD+ALP+KSKGVKRER EAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERCEAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           RD+GPASKK KEDSEKPKEDSE
Sbjct: 301 RDNGPASKKQKEDSEKPKEDSE 322

[Close]
BLAST of Lcy06g020530 vs. ExPASy TrEMBL
Match: A0A0A0LAR1 (Ribosome production factor 2 homolog OS=Cucumis sativus OX=3659 GN=Csa_3G750370 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.6e-164
Identity = 298/322 (92.55%), Postives = 314/322 (97.52%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           ML++RTPKN KVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTE+YHLKKESAVKY
Sbjct: 1   MLQIRTPKNRKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTELYHLKKESAVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKN+GIKPFESGGDASLEFFSLKTDCSII+YGSHSKKRP+NLVI RTY+ HIYD++EVG
Sbjct: 61  SRKNDGIKPFESGGDASLEFFSLKTDCSIILYGSHSKKRPNNLVIARTYNQHIYDMVEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSF YDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLD FRGEVVEN+NL
Sbjct: 121 IENFKSMHSFAYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDFFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           +GLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMV+RRHRLP+DGLR
Sbjct: 181 SGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVS+D IQGKIGRIYIPDQKVGDMA+ +KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDKAKKKEKNVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           RDDGPASKKPKEDSEKPKEDSE
Sbjct: 301 RDDGPASKKPKEDSEKPKEDSE 322

[Close]
BLAST of Lcy06g020530 vs. NCBI nr
Match: XP_023540188.1 (ribosome production factor 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 605.5 bits (1560), Expect = 2.6e-169
Identity = 310/322 (96.27%), Postives = 318/322 (98.76%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+NEGIKPFE+GGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVI RTYDHHIYDLIEVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLD+FRGEVVENINL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSGSVVPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAI GKIGRIYIPDQKVGD+ALP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           RDD PASKKPKEDSEKPKEDSE
Sbjct: 301 RDDVPASKKPKEDSEKPKEDSE 322

[Close]
BLAST of Lcy06g020530 vs. NCBI nr
Match: XP_023005644.1 (ribosome production factor 2 homolog [Cucurbita maxima])

HSP 1 Score: 604.0 bits (1556), Expect = 7.7e-169
Identity = 309/321 (96.26%), Postives = 317/321 (98.75%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+NEGIKPFE+GGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVI RTYDHHIYDLIEVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLD+FRGEVVENINL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSGSVVPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAI GKIGRIYIPDQKVGD+ALP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDS 322
           RDD PASKKPKEDSEKPKEDS
Sbjct: 301 RDDMPASKKPKEDSEKPKEDS 321

[Close]
BLAST of Lcy06g020530 vs. NCBI nr
Match: KAG7028079.1 (Ribosome production factor 2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 604.0 bits (1556), Expect = 7.7e-169
Identity = 309/322 (95.96%), Postives = 317/322 (98.45%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY
Sbjct: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+NEGIKPFE+GGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVI RTYDHHIYDLIEVG
Sbjct: 61  SRRNEGIKPFENGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIARTYDHHIYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKH KEVLLD+FRGEVVENINL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHFKEVLLDMFRGEVVENINL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALR+KKSGSVVPRMELVEVGPSMD+VVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRMKKSGSVVPRMELVEVGPSMDLVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAI GKIGRIYIPDQKVGD+ALP+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIHGKIGRIYIPDQKVGDVALPDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           RDD PASKKPKEDSEKPKEDSE
Sbjct: 301 RDDVPASKKPKEDSEKPKEDSE 322

[Close]
BLAST of Lcy06g020530 vs. NCBI nr
Match: KAG6580669.1 (Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 604.0 bits (1556), Expect = 7.7e-169
Identity = 307/322 (95.34%), Postives = 319/322 (99.07%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLKVRTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTSGVLN VLTE+YHLKKES+VKY
Sbjct: 1   MLKVRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKN+GIKPFESGGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAIQGKIGRIYIPDQKVGDMA+P+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           +DDGPASKKPKEDSEKPKE+SE
Sbjct: 301 KDDGPASKKPKEDSEKPKENSE 322

[Close]
BLAST of Lcy06g020530 vs. NCBI nr
Match: XP_022934916.1 (ribosome production factor 2 homolog [Cucurbita moschata] >XP_023527626.1 ribosome production factor 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 603.6 bits (1555), Expect = 1.0e-168
Identity = 306/322 (95.03%), Postives = 319/322 (99.07%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           MLK+RTPKNGKV+RELEKRAPK+VETGKKTLILHGTKTSGVLN VLTE+YHLKKES+VKY
Sbjct: 1   MLKIRTPKNGKVRRELEKRAPKIVETGKKTLILHGTKTSGVLNAVLTELYHLKKESSVKY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SRKN+GIKPFESGGD+SLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDH IYDL+EVG
Sbjct: 61  SRKNDGIKPFESGGDSSLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHKIYDLVEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVEN+NL
Sbjct: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
           AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR
Sbjct: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAMKTAKD AKKKEKNVSQDAIQGKIGRIYIPDQKVGDMA+P+KSKGVKRERREAKMKN
Sbjct: 241 KEAMKTAKDQAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMAIPDKSKGVKRERREAKMKN 300

Query: 301 RDDGPASKKPKEDSEKPKEDSE 323
           +DDGPASKKPKEDSEKPKE+SE
Sbjct: 301 KDDGPASKKPKEDSEKPKENSE 322

[Close]
BLAST of Lcy06g020530 vs. TAIR 10
Match: AT3G23620.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 461.8 bits (1187), Expect = 4.4e-130
Identity = 228/315 (72.38%), Postives = 272/315 (86.35%), Query Frame = 0 

Query: 1   MLKVRTPKNGKVKRELEKRAPKLVETGKKTLILHGTKTSGVLNEVLTEIYHLKKESAVKY 60
           M+++RTPK GK KR LE RAPKLVETGKKTLILHGTKTS  L+ V+TE+Y LKK  A++Y
Sbjct: 1   MMEIRTPKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRY 60

Query: 61  SRKNEGIKPFESGGDASLEFFSLKTDCSIIVYGSHSKKRPDNLVIGRTYDHHIYDLIEVG 120
           SR+NE I+PFESGG+ SLEFFS KTDCSI VYGSH+KKRPDNLV+GR YDH +YDLIEVG
Sbjct: 61  SRRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVG 120

Query: 121 IENFKSMHSFTYDKKLSPRVGSKPFITFIGEGFENVEELKHLKEVLLDLFRGEVVENINL 180
           IENFKS+ +F+YDKK +P  G+KPFI FIGEGFENV ELKHLKEVL DLFRGEVV+N+NL
Sbjct: 121 IENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 181 AGLDRVYVCTAISPNKVFLTHCALRLKKSGSVVPRMELVEVGPSMDMVVRRHRLPSDGLR 240
            GLDR YVC+AISP KVFLTHCAL+LKKSGS+VPRMELVEVGPSMD+V+RR+RLP+D L 
Sbjct: 181 TGLDRAYVCSAISPTKVFLTHCALKLKKSGSIVPRMELVEVGPSMDLVIRRNRLPNDSLM 240

Query: 241 KEAMKTAKDHAKKKEKNVSQDAIQGKIGRIYIPDQKVGDMALPNKSKGVKRERREAKMKN 300
           KEAM+T+KD  KKKEKNV QDA+ GK G+IY+PDQK+ +M L +KSKG KRER++AK+K+
Sbjct: 241 KEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSKRERKDAKLKH 300

Query: 301 RDDGPASKKPKEDSE 316
           +++   +KK K  SE
Sbjct: 301 KEE-TVAKKMKVSSE 314

The following BLAST results are available for this feature:
BLAST of Lcy06g020530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LUG56.2e-12972.38Ribosome production factor 2 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g2362... [more]
Q9AWM92.3e-12370.83Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
Q9JJ809.7e-5844.37Ribosome production factor 2 homolog OS=Mus musculus OX=10090 GN=Rpf2 PE=2 SV=2[more]
Q2YDN68.2e-5743.41Ribosome production factor 2 homolog OS=Bos taurus OX=9913 GN=RPF2 PE=2 SV=1[more]
Q9H7B21.8e-5643.73Ribosome production factor 2 homolog OS=Homo sapiens OX=9606 GN=RPF2 PE=1 SV=2[more]
BLAST of Lcy06g020530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KZU63.7e-16996.26Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498582... [more]
A0A6J1F3574.8e-16995.03Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114419... [more]
A0A6J1J6551.1e-16895.34Ribosome production factor 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111481697... [more]
A0A6J1FZZ64.1e-16895.34Ribosome production factor 2 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114494... [more]
A0A0A0LAR13.6e-16492.55Ribosome production factor 2 homolog OS=Cucumis sativus OX=3659 GN=Csa_3G750370 ... [more]
BLAST of Lcy06g020530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023540188.12.6e-16996.27ribosome production factor 2 homolog [Cucurbita pepo subsp. pepo][more]
XP_023005644.17.7e-16996.26ribosome production factor 2 homolog [Cucurbita maxima][more]
KAG7028079.17.7e-16995.96Ribosome production factor 2-like protein [Cucurbita argyrosperma subsp. argyros... [more]
KAG6580669.17.7e-16995.34Ribosome production factor 2-like protein, partial [Cucurbita argyrosperma subsp... [more]
XP_022934916.11.0e-16895.03ribosome production factor 2 homolog [Cucurbita moschata] >XP_023527626.1 riboso... [more]
BLAST of Lcy06g020530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G23620.14.4e-13072.38Ribosomal RNA processing Brix domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainSMARTSM00879Brix_2coord: 31..232
e-value: 2.7E-37
score: 139.9
IPR007109Brix domainPFAMPF04427Brixcoord: 35..231
e-value: 3.2E-32
score: 112.2
IPR007109Brix domainPROSITEPS50833BRIXcoord: 28..238
score: 23.029848
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..322
IPR039770Ribosome biogenesis protein Rpf2PANTHERPTHR12728BRIX DOMAIN CONTAINING PROTEINcoord: 1..311

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g020530.1Lcy06g020530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000027 ribosomal large subunit assembly
biological_process GO:0032774 RNA biosynthetic process
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0006364 rRNA processing
cellular_component GO:0005730 nucleolus
molecular_function GO:0019843 rRNA binding