Lcy06g020450 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g020450
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ethylene-responsive transcription factor ERF024
Location	Chr06: 45291616 .. 45292211 (-)
RNA-Seq Expression	Lcy06g020450
Synteny	Lcy06g020450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCCCTTCAACCTCACCTCTCCCCACTTCCCTCCATGGCTTCCTCCGGCCGCCACCCCGTCTACCGAGGCGTCCGCCGACGCAACACCGGCAAATGGGTCTCTGAGATTCGCGAGCCCAGAAAGCCCAACCGGATTTGGCTCGGGACCTTCCCGACCGCCGAAATGGCCGCCGTGGCCTACGACGTTGCCGCCCTCGCCCTCAAGGGCCATGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCCGTCCCTGCATCGCGGTCCCCGTCTGATATCCAGGCGGCCGCCGCCTCTGCTGCAGCCGCGCTTGGAGCGGCTGCTGCGGCGATGGAGGCGCGAAATGGTGGTCCTCGTCGTGCCCGTGGTAGTTCGTCTGGAAGTAATTCGAGCCATGGCTATGGAGTGAGATATGATCAAGAGGAGGTGGGAGGTCAATTCATTGACGAGGATTTGATCTTTGATATGCCTAATGTTTTGATGAACATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAACCATGGCGGAGATGACGACGGAGACGACCACGGTGATCAAAACCTTTGGGATTTTTCCTAA

mRNA sequence

CTTCTTCCCTTCAACCTCACCTCTCCCCACTTCCCTCCATGGCTTCCTCCGGCCGCCACCCCGTCTACCGAGGCGTCCGCCGACGCAACACCGGCAAATGGGTCTCTGAGATTCGCGAGCCCAGAAAGCCCAACCGGATTTGGCTCGGGACCTTCCCGACCGCCGAAATGGCCGCCGTGGCCTACGACGTTGCCGCCCTCGCCCTCAAGGGCCATGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCCGTCCCTGCATCGCGGTCCCCGTCTGATATCCAGGCGGCCGCCGCCTCTGCTGCAGCCGCGCTTGGAGCGGCTGCTGCGGCGATGGAGGCGCGAAATGGTGGTCCTCGTCGTGCCCGTGGTAGTTCGTCTGGAAGTAATTCGAGCCATGGCTATGGAGTGAGATATGATCAAGAGGAGGTGGGAGGTCAATTCATTGACGAGGATTTGATCTTTGATATGCCTAATGTTTTGATGAACATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAACCATGGCGGAGATGACGACGGAGACGACCACGGTGATCAAAACCTTTGGGATTTTTCCTAA

Coding sequence (CDS)

ATGGCTTCCTCCGGCCGCCACCCCGTCTACCGAGGCGTCCGCCGACGCAACACCGGCAAATGGGTCTCTGAGATTCGCGAGCCCAGAAAGCCCAACCGGATTTGGCTCGGGACCTTCCCGACCGCCGAAATGGCCGCCGTGGCCTACGACGTTGCCGCCCTCGCCCTCAAGGGCCATGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCCGTCCCTGCATCGCGGTCCCCGTCTGATATCCAGGCGGCCGCCGCCTCTGCTGCAGCCGCGCTTGGAGCGGCTGCTGCGGCGATGGAGGCGCGAAATGGTGGTCCTCGTCGTGCCCGTGGTAGTTCGTCTGGAAGTAATTCGAGCCATGGCTATGGAGTGAGATATGATCAAGAGGAGGTGGGAGGTCAATTCATTGACGAGGATTTGATCTTTGATATGCCTAATGTTTTGATGAACATGGCGGAAGGAATGCTTCTTAGCCCTCCTCGTTTCAACAACCATGGCGGAGATGACGACGGAGACGACCACGGTGATCAAAACCTTTGGGATTTTTCCTAA

Protein sequence

MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSSHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQNLWDFS

Homology

[Close]

BLAST of Lcy06g020450 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.2e-48
Identity = 116/185 (62.70%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 3   SSGRHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 62
           + GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 63  ELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSS 122
           ELNFPNS +SLP P S SP+DIQAAAASAAAA GAA  A+   N   + +  +   S+  
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSS-- 127

Query: 123 HGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPR--FNNHGGDDDGDDHGDQ 182
                 YD   + G F+DEDL+FDMPNVLMNMAEGMLLSPPR    +   D DG   GD 
Sbjct: 128 ------YDNTNMNG-FMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDD 183

Query: 183 NLWDF 185
            LW+F
Sbjct: 188 YLWNF 183

[Close]

BLAST of Lcy06g020450 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-34
Identity = 92/190 (48.42%), Postives = 123/190 (64.74%), Query Frame = 0


Query: 1   MASSG-----RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALA 60
           MAS+G     + PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+A
Sbjct: 5   MASAGLGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMA 64

Query: 61  LKGHDAELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSS 120
           LKG +A LNFP S  S PVP S S +DI+AAAA+AAA  G      E +    +++  S 
Sbjct: 65  LKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGE-EEKKAKEKKSSSSK 124

Query: 121 SGSNSSHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRF-NNHGGDDDGD 180
           S +   H           G +F+DE+ + +MPN+L NMAEGM+++PP +  +   DD  +
Sbjct: 125 SRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPE 184

Query: 181 DHGDQNLWDF 185
           +  D++LW +
Sbjct: 185 NSNDEDLWGY 192

[Close]

BLAST of Lcy06g020450 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.1e-33
Identity = 89/181 (49.17%), Postives = 112/181 (61.88%), Query Frame = 0


Query: 6   RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
           RHP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G  A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 66  PNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSSHGYG 125
            +SA  L +P +  P +IQ AA+ AA A        E    G + A  +   +      G
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAF-----QNETTTEGSKTAAEAEEAAGEGVREG 169

Query: 126 VRYDQEEVGGQF-IDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGDDHGDQNLWD 185
            R  +E+ GG F +D++ +  MPN   NMAEGMLL PP    NH   +D D  GD +LW 
Sbjct: 170 ERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNH---NDFDGVGDVSLWS 222

[Close]

BLAST of Lcy06g020450 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 88/180 (48.89%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 6   RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
           RHP+YRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G  A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 66  PNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSSHGYG 125
            +SA  L +P S    DIQ AAA AA A           N G             +    
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG--------LDMEETMVEA 163

Query: 126 VRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGDDHGDQNLWDF 185
           +   ++  G  ++DE+ +F MP +L NMAEGMLL PP    NH  D +GD  GD +LW +
Sbjct: 164 IYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGD--GDVSLWSY 213

[Close]

BLAST of Lcy06g020450 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.8e-31
Identity = 82/179 (45.81%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 6   RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
           ++PVYRG+R R +GKWVSEIREP+K  R+WLGT+PT EMAA AYDVAALALKG D  LNF
Sbjct: 86  KNPVYRGIRCR-SGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNF 145

Query: 66  PNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSSHGYG 125
           P+S  S P+P S S + I+ AAA+AAA  GAA AA++   G  +  +   +  +S+ G  
Sbjct: 146 PDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKV--GQKKEDKVYDTAESSTMG-- 205

Query: 126 VRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQNLWDF 185
                      F+DE+ + +MP +L +MA+GM+++PP   +   DD  ++   ++LW +
Sbjct: 206 -----------FVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGESLWSY 248

[Close]

BLAST of Lcy06g020450 vs. ExPASy TrEMBL
Match: A0A6J1CUD0 (ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 GN=LOC111014369 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.8e-74
Identity = 158/185 (85.41%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MASSGRHPVYRGVRRRNT KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKG D
Sbjct: 1   MASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNS 120
           AELNFPNSA+SLPVPASRSPSDIQAAAASAAAALGAAAAAMEA N  PR    SSSG++ 
Sbjct: 61  AELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAMEAGNSHPRNY--SSSGTHY 120

Query: 121 SHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGD-DDGDDHGDQ 180
               G RYDQ E G +FIDEDLIFDMPNVLMNMAEGMLLSPPRFN HGGD DDGDD GDQ
Sbjct: 121 GDVRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGDQ 180

Query: 181 NLWDF 185
           NLW+F
Sbjct: 181 NLWNF 183

[Close]

BLAST of Lcy06g020450 vs. ExPASy TrEMBL
Match: A0A6J1F5U1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111442412 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           M+SS RHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNS 120
           AELNFPNSAASLPVPASRS SDIQAAAASAAAALGAAAAAMEARN    RAR + SG+NS
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNN-GRARSNFSGTNS 120

Query: 121 SHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 180
           S  YG RY++ E+G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFN H G+DD DD GDQN
Sbjct: 121 S--YGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVH-GNDDRDDGGDQN 180

Query: 181 LWDF 185
           LW+F
Sbjct: 181 LWNF 180

[Close]

BLAST of Lcy06g020450 vs. ExPASy TrEMBL
Match: A0A0A0LBA2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.0e-71
Identity = 155/184 (84.24%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 2   ASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 61
           +SSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSS 121
           ELNFPNSA+SLP+PASRSPSDIQAAAASAAAALGAAAAAMEARN    R RGS S     
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSR-RGSHS---ED 122

Query: 122 HGYGVRYDQE-EVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 181
             YG RY QE E+G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDD+ D   DQN
Sbjct: 123 VMYGARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDNRDFGTDQN 182

Query: 182 LWDF 185
           LW+F
Sbjct: 183 LWNF 182

[Close]

BLAST of Lcy06g020450 vs. ExPASy TrEMBL
Match: A0A6J1G3I4 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111450440 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.0e-70
Identity = 150/185 (81.08%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MA+SGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  AELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNS 120
             LNFPNSA+SLPVPASRSPSDIQAAAASAAAALGAAAAA+EAR+G              
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSG-------------- 120

Query: 121 SHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 180
            HG G   D  EVG  F+DEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDG DHG  N
Sbjct: 121 FHG-GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGN 170

Query: 181 LWDFS 186
           LW+FS
Sbjct: 181 LWNFS 170

[Close]

BLAST of Lcy06g020450 vs. ExPASy TrEMBL
Match: A0A6J1J6V1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661 GN=LOC111481761 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 149/184 (80.98%), Postives = 164/184 (89.13%), Query Frame = 0


Query: 1   MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           M+SSGRHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNS 120
           AELNFPNSAASLPVPASRS SDIQAAAASAAAALGAAAAA+EARN   RR R + SG+NS
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAIEARNNNGRR-RSNFSGTNS 120

Query: 121 SHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 180
           S  YG RYD+ E+G +F+DEDLIFDMPNVL+NMAEGMLLSPPRFN HG DD   D G+QN
Sbjct: 121 S--YGTRYDENELGNEFVDEDLIFDMPNVLINMAEGMLLSPPRFNVHGNDD--RDDGNQN 179

Query: 181 LWDF 185
           LW+F
Sbjct: 181 LWNF 179

[Close]

BLAST of Lcy06g020450 vs. NCBI nr
Match: XP_022144756.1 (ethylene-responsive transcription factor ERF024 [Momordica charantia])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 158/185 (85.41%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 1   MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MASSGRHPVYRGVRRRNT KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKG D
Sbjct: 1   MASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNS 120
           AELNFPNSA+SLPVPASRSPSDIQAAAASAAAALGAAAAAMEA N  PR    SSSG++ 
Sbjct: 61  AELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAMEAGNSHPRNY--SSSGTHY 120

Query: 121 SHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGD-DDGDDHGDQ 180
               G RYDQ E G +FIDEDLIFDMPNVLMNMAEGMLLSPPRFN HGGD DDGDD GDQ
Sbjct: 121 GDVRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGDQ 180

Query: 181 NLWDF 185
           NLW+F
Sbjct: 181 NLWNF 183

[Close]

BLAST of Lcy06g020450 vs. NCBI nr
Match: XP_038906274.1 (ethylene-responsive transcription factor ERF024 [Benincasa hispida])

HSP 1 Score: 281.6 bits (719), Expect = 5.0e-72
Identity = 155/184 (84.24%), Postives = 163/184 (88.59%), Query Frame = 0


Query: 2   ASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 61
           +SSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSS 121
           ELNFPNSA+SLPVPASRSPSDIQAAAASAAAALGAAAAA+EARN       GS  G+NSS
Sbjct: 63  ELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARNNS-----GSYRGTNSS 122

Query: 122 H-GYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 181
              YG RY Q+ +G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFN HGGDDD DD  DQN
Sbjct: 123 DIVYGGRYGQDGLGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNIHGGDDDHDDGADQN 181

Query: 182 LWDF 185
           LW+F
Sbjct: 183 LWNF 181

[Close]

BLAST of Lcy06g020450 vs. NCBI nr
Match: XP_022935579.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata])

HSP 1 Score: 278.1 bits (710), Expect = 5.5e-71
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           M+SS RHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D
Sbjct: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNS 120
           AELNFPNSAASLPVPASRS SDIQAAAASAAAALGAAAAAMEARN    RAR + SG+NS
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNN-GRARSNFSGTNS 120

Query: 121 SHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 180
           S  YG RY++ E+G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFN H G+DD DD GDQN
Sbjct: 121 S--YGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVH-GNDDRDDGGDQN 180

Query: 181 LWDF 185
           LW+F
Sbjct: 181 LWNF 180

[Close]

BLAST of Lcy06g020450 vs. NCBI nr
Match: XP_004138009.1 (ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hypothetical protein Csa_000912 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-70
Identity = 155/184 (84.24%), Postives = 162/184 (88.04%), Query Frame = 0


Query: 2   ASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 61
           +SSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSS 121
           ELNFPNSA+SLP+PASRSPSDIQAAAASAAAALGAAAAAMEARN    R RGS S     
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSR-RGSHS---ED 122

Query: 122 HGYGVRYDQE-EVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 181
             YG RY QE E+G QF+DEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDD+ D   DQN
Sbjct: 123 VMYGARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDNRDFGTDQN 182

Query: 182 LWDF 185
           LW+F
Sbjct: 183 LWNF 182

[Close]

BLAST of Lcy06g020450 vs. NCBI nr
Match: XP_022946339.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata] >KAG6596551.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028087.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.2 bits (705), Expect = 2.1e-70
Identity = 150/185 (81.08%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 1   MASSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MA+SGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  AELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNS 120
             LNFPNSA+SLPVPASRSPSDIQAAAASAAAALGAAAAA+EAR+G              
Sbjct: 61  THLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSG-------------- 120

Query: 121 SHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGDDHGDQN 180
            HG G   D  EVG  F+DEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDG DHG  N
Sbjct: 121 FHG-GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGN 170

Query: 181 LWDFS 186
           LW+FS
Sbjct: 181 LWNFS 170

[Close]

BLAST of Lcy06g020450 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 116/185 (62.70%), Postives = 133/185 (71.89%), Query Frame = 0


Query: 3   SSGRHPVYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDA 62
           + GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 63  ELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSS 122
           ELNFPNS +SLP P S SP+DIQAAAASAAAA GAA  A+   N   + +  +   S+  
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSS-- 127

Query: 123 HGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPR--FNNHGGDDDGDDHGDQ 182
                 YD   + G F+DEDL+FDMPNVLMNMAEGMLLSPPR    +   D DG   GD 
Sbjct: 128 ------YDNTNMNG-FMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDD 183

Query: 183 NLWDF 185
            LW+F
Sbjct: 188 YLWNF 183

[Close]

BLAST of Lcy06g020450 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-35
Identity = 92/190 (48.42%), Postives = 123/190 (64.74%), Query Frame = 0


Query: 1   MASSG-----RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALA 60
           MAS+G     + PVYRG+R R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+A
Sbjct: 5   MASAGLGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMA 64

Query: 61  LKGHDAELNFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSS 120
           LKG +A LNFP S  S PVP S S +DI+AAAA+AAA  G      E +    +++  S 
Sbjct: 65  LKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGE-EEKKAKEKKSSSSK 124

Query: 121 SGSNSSHGYGVRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRF-NNHGGDDDGD 180
           S +   H           G +F+DE+ + +MPN+L NMAEGM+++PP +  +   DD  +
Sbjct: 125 SRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPE 184

Query: 181 DHGDQNLWDF 185
           +  D++LW +
Sbjct: 185 NSNDEDLWGY 192

[Close]

BLAST of Lcy06g020450 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 141.7 bits (356), Expect = 5.8e-34
Identity = 89/181 (49.17%), Postives = 112/181 (61.88%), Query Frame = 0


Query: 6   RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
           RHP+YRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G  A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 66  PNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSSHGYG 125
            +SA  L +P +  P +IQ AA+ AA A        E    G + A  +   +      G
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAF-----QNETTTEGSKTAAEAEEAAGEGVREG 169

Query: 126 VRYDQEEVGGQF-IDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGDDHGDQNLWD 185
            R  +E+ GG F +D++ +  MPN   NMAEGMLL PP    NH   +D D  GD +LW 
Sbjct: 170 ERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNH---NDFDGVGDVSLWS 222

[Close]

BLAST of Lcy06g020450 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 88/180 (48.89%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 6   RHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAELNF 65
           RHP+YRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G  A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 66  PNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSSHGYG 125
            +SA  L +P S    DIQ AAA AA A           N G             +    
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHG--------LDMEETMVEA 163

Query: 126 VRYDQEEVGGQFIDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGDDHGDQNLWDF 185
           +   ++  G  ++DE+ +F MP +L NMAEGMLL PP    NH  D +GD  GD +LW +
Sbjct: 164 IYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGD--GDVSLWSY 213

[Close]

BLAST of Lcy06g020450 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.5e-31
Identity = 88/188 (46.81%), Postives = 110/188 (58.51%), Query Frame = 0


Query: 4   SGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDAEL 63
           SG+H ++RG+R RN GKWVSEIREPRK  RIWLGT+P  EMAA AYDVAALALKG DA L
Sbjct: 59  SGKHSIFRGIRLRN-GKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVL 118

Query: 64  NFPNSAASLPVPASRSPSDIQAAAASAAAALGAAAAAMEARNGGPRRARGSSSGSNSSHG 123
           NFP  A +   P S S +DI+AAA+        AA   +   GG  +             
Sbjct: 119 NFPGLALTYVAPVSNSAADIRAAAS-------RAAEMKQPDQGGDEKVLEPVQP------ 178

Query: 124 YGVRYDQEEVGG-----QFIDEDLIFDMPNVLMNMAEGMLLSPPRFNNHG--GDDDGDDH 183
            G   + EEV       +F+DE+ + +MP +L  MAEGML+SPPR   H    DD  ++H
Sbjct: 179 -GKEEELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENH 231

Query: 184 GDQNLWDF 185
              NLW +
Sbjct: 239 EGDNLWSY 231

The following BLAST results are available for this feature:

BLAST of Lcy06g020450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJR0	5.2e-48	62.70	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	1.5e-34	48.42	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FJ93	8.1e-33	49.17	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
P93835	1.5e-31	48.89	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9CAN9	5.8e-31	45.81	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy06g020450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUD0	9.8e-74	85.41	ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1F5U1	2.7e-71	82.61	ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=36...	[more]
A0A0A0LBA2	6.0e-71	84.24	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=...	[more]
A0A6J1G3I4	1.0e-70	81.08	ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1J6V1	3.0e-70	80.98	ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Lcy06g020450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144756.1	2.0e-73	85.41	ethylene-responsive transcription factor ERF024 [Momordica charantia]	[more]
XP_038906274.1	5.0e-72	84.24	ethylene-responsive transcription factor ERF024 [Benincasa hispida]	[more]
XP_022935579.1	5.5e-71	82.61	ethylene-responsive transcription factor ERF024-like [Cucurbita moschata]	[more]
XP_004138009.1	1.2e-70	84.24	ethylene-responsive transcription factor ERF024 [Cucumis sativus] >KGN59068.1 hy...	[more]
XP_022946339.1	2.1e-70	81.08	ethylene-responsive transcription factor ERF024-like [Cucurbita moschata] >KAG65...	[more]

BLAST of Lcy06g020450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36450.1	3.7e-49	62.70	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	1.0e-35	48.42	Integrase-type DNA-binding superfamily protein	[more]
AT5G51990.1	5.8e-34	49.17	C-repeat-binding factor 4	[more]
AT4G25490.1	1.1e-32	48.89	C-repeat/DRE binding factor 1	[more]
AT5G52020.1	3.5e-31	46.81	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 10..21 score: 65.15 coord: 32..48 score: 66.42
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 9..72 e-value: 5.8E-33 score: 125.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..59 e-value: 3.6E-13 score: 49.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 9..66 score: 22.945246
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 10..68 e-value: 3.48349E-29 score: 100.809
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 9..68 e-value: 1.5E-24 score: 87.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..185
None	No IPR available	PANTHER	PTHR31985:SF121	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024	coord: 3..184
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 3..184
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g020450.1	Lcy06g020450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity