Lcy06g019880 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g019880
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr06: 44613851 .. 44616087 (-)
RNA-Seq ExpressionLcy06g019880
SyntenyLcy06g019880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAATCTTGTGCCCGAGACAACGACAGATTTTTGAAAATTAGTTAGCCGCTACTATTTCTCCAATCAACGCCATAATTCACATGCTCAAATCCAAAAGCCAAAACATTTTCATCAGCCATGGAAAGTTTCGATTTTCCTCAGCTTCTGCAACAGCAACAGCGAAAGAAGCTTTTATTTCTTCTCAGATCGATGTGAATAACCACTCCAATGAACCAAGCTCCTCTACCCAAGAATCTCAATCTTCTTTCCTTCTCCATTTCGATCCCAAACGATTTCTAACCGCGCTTTTGAGTTGCAGAAATCTCTTTCAAATCAGGCAAGTCCATGCCCAAATTGCTTCTACAGGCGCATTCAGAAACCTCCCGATTGCCAATAAACTTCTCTTCATATATACCCAACATGGCGCCTTGGAGGATGCTCGTGAATTGTTCGATGAAATGACTGAGAGAGACCCTTATAGCTGGAGTGTGATAGTTGGTGGGTATGCCAAAATTGGGGATTTTTCTTCTTGTTTTCGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCGTTGGATAACTATACATTGCCGATTGTTATAAGGGCTTGCAGGGATTTGAAGGACCTGCAATTTGGTAGGCTTATTCACTGTGCCACTTTGAAATGTGGGTTGGATTATGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGATGTAAAGTGATCGAGGATGCTCGTCAACTGTTCGATAAAATGCAGAAGAGAGACCTTGTGACATGGACGGTGATGATTGGTGCCTTGGCTGAATGTAGAAGTGCTGTTGAGTCATTGGCTTTGTTTGATAGTATGAGAGATGAAGGTATTGTCCCAGATAAAGTGGCGTTGGTGACTGTTGTTTATGCTTGTGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATTTTCTTTGGATGTAATTTTAGGAACAGCAATGATTGATATGTATGCAAAATGTGGTAGTGTTGATTCCGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACTTGGAGTGCTATGATTGCAGCCTATGGATATCATGGACAAGGTGGGAAAGCGTTCGAGTTGTTCCCGATGATGTTAAGCAGCGGAATATTGCCAAATAGGATCACCTTTGTCTCATTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGGTTTTTTTCCTCAATGTGGGACGAGTATGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTCGATCTCTTAGGTCGAGCTGGGAGGTTCGATGAGGCCTTGGGATTGATAGAAAGCATGACAGTAGAGAAAGATGAGGGGCTATGGGGAGCATTGCTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCCGAAAGAGTAGCAAGGTCTCTTCTTGAGCTACAGCCTCAGAACCCAGGGCATTATGTATTGCTTTCAAACATTTATGCAAATGCTGGTAAGTGGGAAGATATGGCAAAAACAAGAGACTTGATGACCAAAGGTGGACTGAAGAAGATTCCTGGTTGGACTTGGATTGAGGTGGATGAAAAACTTTATCAGTTCAGTGTTGGAGACAAAACACATCCCAGGTCAGCTGAGATCTATGAGACGTTGAAACGATTGGGCGAGAAGCTCGAGTTGGCGGGTTACGTCCCCGACACAAACTATGTGTTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTCTATGCACACAGTGAGAAGTTAGCAATTGCATTTGGCCTAATAGCCATACCTCAAGACAACCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGTCATACATTTTGCAAATTTGTATCATCTATTGAACAGAGAACGATCATACTACGCGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCTTGCAGAGACTATTGGTAAGTTGTTGCTCAACCTCGAAGCAAGCGCGCCAAGCTAAGAACAAAACAAAGGTTAGTTCATTCTCTTGTTTATAATACTGTTTGTTGTTTGATTGGAAGTTCTGCCTTGAACATTGATGCCATTGGGTTTATGTTATAGGACTTGTGAAAAGAGAATGATTATAAATTAAAATCCTAAAACAATTCTCTTTTAGAATAGGATGGATTATTCGCCTGTGAGTGTAGCACTCGATGAAAATTAACCTGGACTTTTG

mRNA sequence

TGAAATCTTGTGCCCGAGACAACGACAGATTTTTGAAAATTAGTTAGCCGCTACTATTTCTCCAATCAACGCCATAATTCACATGCTCAAATCCAAAAGCCAAAACATTTTCATCAGCCATGGAAAGTTTCGATTTTCCTCAGCTTCTGCAACAGCAACAGCGAAAGAAGCTTTTATTTCTTCTCAGATCGATGTGAATAACCACTCCAATGAACCAAGCTCCTCTACCCAAGAATCTCAATCTTCTTTCCTTCTCCATTTCGATCCCAAACGATTTCTAACCGCGCTTTTGAGTTGCAGAAATCTCTTTCAAATCAGGCAAGTCCATGCCCAAATTGCTTCTACAGGCGCATTCAGAAACCTCCCGATTGCCAATAAACTTCTCTTCATATATACCCAACATGGCGCCTTGGAGGATGCTCGTGAATTGTTCGATGAAATGACTGAGAGAGACCCTTATAGCTGGAGTGTGATAGTTGGTGGGTATGCCAAAATTGGGGATTTTTCTTCTTGTTTTCGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCGTTGGATAACTATACATTGCCGATTGTTATAAGGGCTTGCAGGGATTTGAAGGACCTGCAATTTGGTAGGCTTATTCACTGTGCCACTTTGAAATGTGGGTTGGATTATGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGATGTAAAGTGATCGAGGATGCTCGTCAACTGTTCGATAAAATGCAGAAGAGAGACCTTGTGACATGGACGGTGATGATTGGTGCCTTGGCTGAATGTAGAAGTGCTGTTGAGTCATTGGCTTTGTTTGATAGTATGAGAGATGAAGGTATTGTCCCAGATAAAGTGGCGTTGGTGACTGTTGTTTATGCTTGTGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATTTTCTTTGGATGTAATTTTAGGAACAGCAATGATTGATATGTATGCAAAATGTGGTAGTGTTGATTCCGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACTTGGAGTGCTATGATTGCAGCCTATGGATATCATGGACAAGGTGGGAAAGCGTTCGAGTTGTTCCCGATGATGTTAAGCAGCGGAATATTGCCAAATAGGATCACCTTTGTCTCATTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGGTTTTTTTCCTCAATGTGGGACGAGTATGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTCGATCTCTTAGGTCGAGCTGGGAGGTTCGATGAGGCCTTGGGATTGATAGAAAGCATGACAGTAGAGAAAGATGAGGGGCTATGGGGAGCATTGCTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCCGAAAGAGTAGCAAGGTCTCTTCTTGAGCTACAGCCTCAGAACCCAGGGCATTATGTATTGCTTTCAAACATTTATGCAAATGCTGGTAAGTGGGAAGATATGGCAAAAACAAGAGACTTGATGACCAAAGGTGGACTGAAGAAGATTCCTGGTTGGACTTGGATTGAGGTGGATGAAAAACTTTATCAGTTCAGTGTTGGAGACAAAACACATCCCAGGTCAGCTGAGATCTATGAGACGTTGAAACGATTGGGCGAGAAGCTCGAGTTGGCGGGTTACGTCCCCGACACAAACTATGTGTTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTCTATGCACACAGTGAGAAGTTAGCAATTGCATTTGGCCTAATAGCCATACCTCAAGACAACCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGTCATACATTTTGCAAATTTGTATCATCTATTGAACAGAGAACGATCATACTACGCGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCTTGCAGAGACTATTGGTAAGTTGTTGCTCAACCTCGAAGCAAGCGCGCCAAGCTAAGAACAAAACAAAGGTTAGTTCATTCTCTTGTTTATAATACTGTTTGTTGTTTGATTGGAAGTTCTGCCTTGAACATTGATGCCATTGGGTTTATGTTATAGGACTTGTGAAAAGAGAATGATTATAAATTAAAATCCTAAAACAATTCTCTTTTAGAATAGGATGGATTATTCGCCTGTGAGTGTAGCACTCGATGAAAATTAACCTGGACTTTTG

Coding sequence (CDS)

ATGCTCAAATCCAAAAGCCAAAACATTTTCATCAGCCATGGAAAGTTTCGATTTTCCTCAGCTTCTGCAACAGCAACAGCGAAAGAAGCTTTTATTTCTTCTCAGATCGATGTGAATAACCACTCCAATGAACCAAGCTCCTCTACCCAAGAATCTCAATCTTCTTTCCTTCTCCATTTCGATCCCAAACGATTTCTAACCGCGCTTTTGAGTTGCAGAAATCTCTTTCAAATCAGGCAAGTCCATGCCCAAATTGCTTCTACAGGCGCATTCAGAAACCTCCCGATTGCCAATAAACTTCTCTTCATATATACCCAACATGGCGCCTTGGAGGATGCTCGTGAATTGTTCGATGAAATGACTGAGAGAGACCCTTATAGCTGGAGTGTGATAGTTGGTGGGTATGCCAAAATTGGGGATTTTTCTTCTTGTTTTCGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCGTTGGATAACTATACATTGCCGATTGTTATAAGGGCTTGCAGGGATTTGAAGGACCTGCAATTTGGTAGGCTTATTCACTGTGCCACTTTGAAATGTGGGTTGGATTATGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGATGTAAAGTGATCGAGGATGCTCGTCAACTGTTCGATAAAATGCAGAAGAGAGACCTTGTGACATGGACGGTGATGATTGGTGCCTTGGCTGAATGTAGAAGTGCTGTTGAGTCATTGGCTTTGTTTGATAGTATGAGAGATGAAGGTATTGTCCCAGATAAAGTGGCGTTGGTGACTGTTGTTTATGCTTGTGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATTTTCTTTGGATGTAATTTTAGGAACAGCAATGATTGATATGTATGCAAAATGTGGTAGTGTTGATTCCGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACTTGGAGTGCTATGATTGCAGCCTATGGATATCATGGACAAGGTGGGAAAGCGTTCGAGTTGTTCCCGATGATGTTAAGCAGCGGAATATTGCCAAATAGGATCACCTTTGTCTCATTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGGTTTTTTTCCTCAATGTGGGACGAGTATGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTCGATCTCTTAGGTCGAGCTGGGAGGTTCGATGAGGCCTTGGGATTGATAGAAAGCATGACAGTAGAGAAAGATGAGGGGCTATGGGGAGCATTGCTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCCGAAAGAGTAGCAAGGTCTCTTCTTGAGCTACAGCCTCAGAACCCAGGGCATTATGTATTGCTTTCAAACATTTATGCAAATGCTGGTAAGTGGGAAGATATGGCAAAAACAAGAGACTTGATGACCAAAGGTGGACTGAAGAAGATTCCTGGTTGGACTTGGATTGAGGTGGATGAAAAACTTTATCAGTTCAGTGTTGGAGACAAAACACATCCCAGGTCAGCTGAGATCTATGAGACGTTGAAACGATTGGGCGAGAAGCTCGAGTTGGCGGGTTACGTCCCCGACACAAACTATGTGTTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTCTATGCACACAGTGAGAAGTTAGCAATTGCATTTGGCCTAATAGCCATACCTCAAGACAACCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGTCATACATTTTGCAAATTTGTATCATCTATTGAACAGAGAACGATCATACTACGCGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCTTGCAGAGACTATTGGTAA

Protein sequence

MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHFDPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEMTERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRLIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECRSAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGTAMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDANRFHHFKEGACSCRDYW
Homology
[Close]
BLAST of Lcy06g019880 vs. ExPASy Swiss-Prot
Match: Q9LFL5 (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 2.3e-135
Identity = 236/602 (39.20%), Postives = 354/602 (58.80%), Query Frame = 0 

Query: 79  RQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEMTERDPYSWSVIVGGYAKI 138
           +Q+H    ++   +N+ + N L+ +Y + G +++A  +F  M+ +D  SW+ +V GY++I
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308

Query: 139 GDFSSCFRMF-----------------------------------RELVRCGMPLDNYTL 198
           G F    R+F                                   R+++  G+  +  TL
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368

Query: 199 PIVIRACRDLKDLQFGRLIHCATLKCGLDY-------DHFVCASLVDMYARCKVIEDARQ 258
             V+  C  +  L  G+ IHC  +K  +D        ++ V   L+DMYA+CK ++ AR 
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428

Query: 259 LFDKM--QKRDLVTWTVMIGALAECRSAVESLALFDSMRDEGIV--PDKVALVTVVYACA 318
           +FD +  ++RD+VTWTVMIG  ++   A ++L L   M +E     P+   +   + ACA
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488

Query: 319 KLGAMNKARAIHDY-INGTRFSLDVILGTAMIDMYAKCGSVDSAREIFDQMQVKNVITWS 378
            L A+   + IH Y +   + ++ + +   +IDMYAKCGS+  AR +FD M  KN +TW+
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548

Query: 379 AMIAAYGYHGQGGKAFELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDE 438
           +++  YG HG G +A  +F  M   G   + +T + +LYACSH+G+I++G  +F+ M   
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608

Query: 439 YGVRPDVKHYTCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGALLGACRIHRRLDLAER 498
           +GV P  +HY C+VDLLGRAGR + AL LIE M +E    +W A L  CRIH +++L E 
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668

Query: 499 VARSLLELQPQNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLY 558
            A  + EL   + G Y LLSN+YANAG+W+D+ + R LM   G+KK PG +W+E  +   
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728

Query: 559 QFSVGDKTHPRSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAI 618
            F VGDKTHP + EIY+ L    ++++  GYVP+T + LHDVD+E K  LL+ HSEKLA+
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLAL 788

Query: 619 AFGLIAIPQDNPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDANRFHHFKEGACSCRD 634
           A+G++  PQ   IRITKNLRVCGDCHT   ++S I    IILRD++RFHHFK G+CSC+ 
Sbjct: 789 AYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKG 848

[Close]
BLAST of Lcy06g019880 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 483.8 bits (1244), Expect = 3.0e-135
Identity = 236/561 (42.07%), Postives = 349/561 (62.21%), Query Frame = 0 

Query: 74  NLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEMTERDPYSWSVIVG 133
           NL    ++HA +   G   NL + N L+ +Y++          F  M ++D  SW+ ++ 
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460

Query: 134 GYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRLIHCATLKCGLDY 193
           GYA+         +FR++ +  M +D   L  ++RA   LK +   + IHC  L+ GL  
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-L 520

Query: 194 DHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECRSAVESLALFDSMR 253
           D  +   LVD+Y +C+ +  A ++F+ ++ +D+V+WT MI + A   +  E++ LF  M 
Sbjct: 521 DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV 580

Query: 254 DEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGTAMIDMYAKCGSVD 313
           + G+  D VAL+ ++ A A L A+NK R IH Y+    F L+  +  A++DMYA CG + 
Sbjct: 581 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 640

Query: 314 SAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILPNRITFVSLLYACS 373
           SA+ +FD+++ K ++ +++MI AYG HG G  A ELF  M    + P+ I+F++LLYACS
Sbjct: 641 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 700

Query: 374 HAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGLIESMTVEKDEGLW 433
           HAGL++EG+ F   M  EY + P  +HY C+VD+LGRA    EA   ++ M  E    +W
Sbjct: 701 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 760

Query: 434 GALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKWEDMAKTRDLMTKG 493
            ALL ACR H   ++ E  A+ LLEL+P+NPG+ VL+SN++A  G+W D+ K R  M   
Sbjct: 761 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 820

Query: 494 GLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLEL-AGYVPDTNYVLHD 553
           G++K PG +WIE+D K+++F+  DK+HP S EIYE L  +  KLE   GYV DT +VLH+
Sbjct: 821 GMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHN 880

Query: 554 VDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFCKFVSSIEQRTII 613
           VDE  K  +L+ HSE++AIA+GL+  P    +RITKNLRVC DCHTFCK VS + +R I+
Sbjct: 881 VDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIV 940

Query: 614 LRDANRFHHFKEGACSCRDYW 634
           +RDANRFHHF+ G CSC D W
Sbjct: 941 MRDANRFHHFESGLCSCGDSW 960

[Close]
BLAST of Lcy06g019880 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 5.1e-135
Identity = 224/538 (41.64%), Postives = 341/538 (63.38%), Query Frame = 0 

Query: 96  IANKLLFIYTQHGALEDARELFDEMTERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCG 155
           + N L+ +Y +   L DA +LFD+M +R+  SW+ ++  Y+K         +   ++R  
Sbjct: 98  LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157

Query: 156 MPLDNYTLPIVIRACRDLKDLQFGRLIHCATLKCGLDYDHFVCASLVDMYARCKVIEDAR 215
           +  + YT   V+R+C  + D+   R++HC  +K GL+ D FV ++L+D++A+    EDA 
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 217

Query: 216 QLFDKMQKRDLVTWTVMIGALAECRSAVESLALFDSMRDEGIVPDKVALVTVVYACAKLG 275
            +FD+M   D + W  +IG  A+   +  +L LF  M+  G + ++  L +V+ AC  L 
Sbjct: 218 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 277

Query: 276 AMNKARAIHDYINGTRFSLDVILGTAMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIA 335
            +      H +I   ++  D+IL  A++DMY KCGS++ A  +F+QM+ ++VITWS MI+
Sbjct: 278 LLELGMQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 337

Query: 336 AYGYHGQGGKAFELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVR 395
               +G   +A +LF  M SSG  PN IT V +L+ACSHAGL+E+G  +F SM   YG+ 
Sbjct: 338 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 397

Query: 396 PDVKHYTCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGALLGACRIHRRLDLAERVARS 455
           P  +HY CM+DLLG+AG+ D+A+ L+  M  E D   W  LLGACR+ R + LAE  A+ 
Sbjct: 398 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 457

Query: 456 LLELQPQNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSV 515
           ++ L P++ G Y LLSNIYAN+ KW+ + + R  M   G+KK PG +WIEV+++++ F +
Sbjct: 458 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 517

Query: 516 GDKTHPRSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGL 575
           GD +HP+  E+ + L +L  +L   GYVP+TN+VL D++ E  +  L  HSEKLA+AFGL
Sbjct: 518 GDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 577

Query: 576 IAIPQDNPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           + +P +  IRI KNLR+CGDCH FCK  S +E R+I++RD  R+HHF++G CSC DYW
Sbjct: 578 MTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]
BLAST of Lcy06g019880 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 6.6e-135
Identity = 220/532 (41.35%), Postives = 344/532 (64.66%), Query Frame = 0 

Query: 104 YTQHGALEDARELFDEMTERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTL 163
           Y   G +E+A++LFDE+  +D  SW+ ++ GYA+ G++     +F+++++  +  D  T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269

Query: 164 PIVIRACRDLKDLQFGRLIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQK 223
             V+ AC     ++ GR +H      G   +  +  +L+D+Y++C  +E A  LF+++  
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329

Query: 224 RDLVTWTVMIGALAECRSAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAI 283
           +D+++W  +IG         E+L LF  M   G  P+ V +++++ ACA LGA++  R I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389

Query: 284 HDYINGTRFSLD--VILGTAMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHG 343
           H YI+     +     L T++IDMYAKCG +++A ++F+ +  K++ +W+AMI  +  HG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449

Query: 344 QGGKAFELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHY 403
           +   +F+LF  M   GI P+ ITFV LL ACSH+G+++ G+  F +M  +Y + P ++HY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509

Query: 404 TCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQP 463
            CM+DLLG +G F EA  +I  M +E D  +W +LL AC++H  ++L E  A +L++++P
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569

Query: 464 QNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHP 523
           +NPG YVLLSNIYA+AG+W ++AKTR L+   G+KK+PG + IE+D  +++F +GDK HP
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629

Query: 524 RSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQD 583
           R+ EIY  L+ +   LE AG+VPDT+ VL +++EE K+G L  HSEKLAIAFGLI+    
Sbjct: 630 RNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 689

Query: 584 NPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
             + I KNLRVC +CH   K +S I +R II RD  RFHHF++G CSC DYW
Sbjct: 690 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]
BLAST of Lcy06g019880 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 5.6e-134
Identity = 235/568 (41.37%), Postives = 339/568 (59.68%), Query Frame = 0 

Query: 66  LTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEMTERDP 125
           L A+   + L    Q+H+    TG + +  +    + +Y++ G ++    LF E  + D 
Sbjct: 228 LPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDI 287

Query: 126 YSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRLIHCA 185
            +++ ++ GY   G+      +F+EL+  G  L + TL  ++     L  +     IH  
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGY 347

Query: 186 TLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECRSAVES 245
            LK        V  +L  +Y++   IE AR+LFD+  ++ L +W  MI    +     ++
Sbjct: 348 CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 407

Query: 246 LALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGTAMIDM 305
           ++LF  M+     P+ V +  ++ ACA+LGA++  + +HD +  T F   + + TA+I M
Sbjct: 408 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 467

Query: 306 YAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILPNRITF 365
           YAKCGS+  AR +FD M  KN +TW+ MI+ YG HGQG +A  +F  ML+SGI P  +TF
Sbjct: 468 YAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTF 527

Query: 366 VSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGLIESMT 425
           + +LYACSHAGL++EG   F+SM   YG  P VKHY CMVD+LGRAG    AL  IE+M+
Sbjct: 528 LCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS 587

Query: 426 VEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKWEDMAK 485
           +E    +W  LLGACRIH+  +LA  V+  L EL P N G++VLLSNI++    +   A 
Sbjct: 588 IEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAAT 647

Query: 486 TRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELAGYVPD 545
            R    K  L K PG+T IE+ E  + F+ GD++HP+  EIYE L++L  K+  AGY P+
Sbjct: 648 VRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPE 707

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFCKFVSS 605
           T   LHDV+EE ++ ++  HSE+LAIAFGLIA      IRI KNLRVC DCHT  K +S 
Sbjct: 708 TELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISK 767

Query: 606 IEQRTIILRDANRFHHFKEGACSCRDYW 634
           I +R I++RDANRFHHFK+G CSC DYW
Sbjct: 768 ITERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]
BLAST of Lcy06g019880 vs. ExPASy TrEMBL
Match: A0A6J1KYT5 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498794 PE=3 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 579/633 (91.47%), Postives = 599/633 (94.63%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSK QNIFI+HGK RFSSASAT   KEA ISSQ +VNNHSNEP+SSTQESQSSFLL+F
Sbjct: 1   MLKSKRQNIFINHGKLRFSSASATTPVKEASISSQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
            PKRF+T LLSCRNLFQIRQVH  IAS+GAFRNL IANKLLF+Y Q+GALEDA ELFDEM
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           TERDPYSWSVIVGGYAK+ DFSSCF MFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR
Sbjct: 121 TERDPYSWSVIVGGYAKVKDFSSCFSMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           +IHCAT KCGLD+DHFVCASLVDMYARCKVIEDARQLFDKM +RDLVTWTVM+GALAEC 
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
           SAVESL LFD MR EGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRF LDVILGT
Sbjct: 241 SAVESLTLFDRMRVEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFCLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVD AREIFDQMQ+KNVITWSAMIAAYGYHGQGGKA +LFPMMLSSGILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQMKNVITWSAMIAAYGYHGQGGKALKLFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IESMTVEKDEGLWGALLGACRIHRRLDLA+RVA SLLELQPQNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           EDMAKTRDLMTK GLKKIPGWTWIEVDEKLYQFSVGDKTHPRS+EIY  LKR+ EKLELA
Sbjct: 481 EDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYVMLKRVDEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLI IP D PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVSSIE+RTIILRDANRFHHFKEG CSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGGCSCRDYW 633

[Close]
BLAST of Lcy06g019880 vs. ExPASy TrEMBL
Match: A0A6J1FK20 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444929 PE=3 SV=1)

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 579/633 (91.47%), Postives = 600/633 (94.79%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSKSQ IFI++GK RFSSASAT   KEA IS Q +VNNHSNEP+SSTQESQSSFLL+F
Sbjct: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
            PKRF+T LLSCRNLFQIRQVH  IAS+GAFRNL IANKLLF+Y Q+GALEDA ELFDEM
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           TERD YSWSVIVGGYAK+ DFSSCF MFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR
Sbjct: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           +IHCAT KCGLD+DHFVCASLVDMYARCKVIEDARQLFDKM +RDLVTWTVM+GALAEC 
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
           SAVESL LFD MRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTR+ LDVILGT
Sbjct: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVD AREIFDQMQVKNVITWSAMIAAYGYHGQGGKA ELFPMMLSSGILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGVRPDVKHYTCMVDLLGRAGRFDEAL L
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IESMTVEKDEGLWGALLGACRIHRRLDLA+RVA SLLELQPQNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           +DMAKTRDLMTK GLKKIPGWTWIEVDEKLYQFSVGDKTHPRS+EIYE LKR+GEKLELA
Sbjct: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLI IP D PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVSSIE+RTIILRDANRFHHFKEGACSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 633

[Close]
BLAST of Lcy06g019880 vs. ExPASy TrEMBL
Match: A0A6J1CTP5 (pentatricopeptide repeat-containing protein At2g33760-like OS=Momordica charantia OX=3673 GN=LOC111014240 PE=3 SV=1)

HSP 1 Score: 1177.9 bits (3046), Expect = 0.0e+00
Identity = 568/634 (89.59%), Postives = 595/634 (93.85%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQI-DVNNHSNEPSSSTQESQSSFLLH 60
           ML+SK Q  F++HGK RF S S T TA+E  +SS + DVNN SNEP+ STQESQSSFLL 
Sbjct: 1   MLRSKGQRFFVNHGKLRFFSVSETTTAEETSLSSSLFDVNNPSNEPNFSTQESQSSFLLQ 60

Query: 61  FDPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDE 120
           FDP+R++TALLSCRNLFQIRQVHA+IAS G FRNL IANKLLF YTQHGALEDAR+LFD+
Sbjct: 61  FDPRRYITALLSCRNLFQIRQVHARIASNGIFRNLAIANKLLFAYTQHGALEDARDLFDK 120

Query: 121 MTERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFG 180
           MTERDPYSWSVI+GGYAKIGDFSSCF MFREL RCGMP DNYTLPIVIRACRDLKDLQFG
Sbjct: 121 MTERDPYSWSVIIGGYAKIGDFSSCFGMFRELFRCGMPFDNYTLPIVIRACRDLKDLQFG 180

Query: 181 RLIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAEC 240
           RLIHCATLKCGLDYDHFVCASLVDMY+RC+VI+DARQLFDKM KRDLVTWTVMIGALAEC
Sbjct: 181 RLIHCATLKCGLDYDHFVCASLVDMYSRCRVIDDARQLFDKMHKRDLVTWTVMIGALAEC 240

Query: 241 RSAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILG 300
            SA ESL LFD MRDEGIVPDKVALVTVVYACAKLGAMNKARA+HDYINGT+FSLDVILG
Sbjct: 241 SSAFESLVLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAVHDYINGTKFSLDVILG 300

Query: 301 TAMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGIL 360
           TAMIDMYAKCG V+ AREIFDQMQVKNVITWSAMIAAYGYHGQG +A ELFPMMLSSGIL
Sbjct: 301 TAMIDMYAKCGDVEWAREIFDQMQVKNVITWSAMIAAYGYHGQGREALELFPMMLSSGIL 360

Query: 361 PNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALG 420
           PNRITFVSLLYACSHAGLIEEG RFFS M DEYGVRPDVKHYTCMVDLLGRAGRF+EAL 
Sbjct: 361 PNRITFVSLLYACSHAGLIEEGHRFFSLMSDEYGVRPDVKHYTCMVDLLGRAGRFEEALR 420

Query: 421 LIESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGK 480
           LIESMTVEKDEGLWGALLGACRIHRRLDLAERVA+SLLE+QPQNPGHYVLLSNIYANAGK
Sbjct: 421 LIESMTVEKDEGLWGALLGACRIHRRLDLAERVAKSLLEMQPQNPGHYVLLSNIYANAGK 480

Query: 481 WEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLEL 540
           WEDMAKTRDLMTKGGLKKIPGWTWIEVD KLYQFSVGDKTHPRS EIYE LKRLGEKLE 
Sbjct: 481 WEDMAKTRDLMTKGGLKKIPGWTWIEVDAKLYQFSVGDKTHPRSXEIYEKLKRLGEKLEF 540

Query: 541 AGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTF 600
           AGYVPDTNYVLHDVDEEVKQGLL+AHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTF
Sbjct: 541 AGYVPDTNYVLHDVDEEVKQGLLFAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTF 600

Query: 601 CKFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           CKFVSSIEQRTI+LRDANRFHHFK+GACSCRDYW
Sbjct: 601 CKFVSSIEQRTIVLRDANRFHHFKDGACSCRDYW 634

[Close]
BLAST of Lcy06g019880 vs. ExPASy TrEMBL
Match: A0A5D3DNV6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004080 PE=3 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 526/633 (83.10%), Postives = 564/633 (89.10%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSK Q+IFI+HGK RFSSAS         +S Q DVN +SNEP+  TQES+SS +LH+
Sbjct: 1   MLKSKCQHIFINHGKLRFSSAS---------LSWQFDVNCNSNEPTPCTQESESSHVLHY 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
           DPKRF  +LLSCRNLFQ+RQVHAQIA+ GAFRNL +ANKLLF+Y + GALEDA+ELFD M
Sbjct: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++RDPYSWS+IVGGYAK+GDF SCF MFREL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 SKRDPYSWSIIVGGYAKVGDFFSCFWMFRELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           LIHC TLKCGLDY  FVCASLVDMYARCKVIEDARQ+F KM KRDL TWTVMIGALAE  
Sbjct: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
             VESLA FD MRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT +SLDVILGT
Sbjct: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVDSAR IFD+MQV+NVITWSAMIAAYGYHGQG KA ELFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGV PDVKHYTCMVDLLGRAGR DEAL +
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLAERVA SL +LQ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           +DMAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRS+EIY+ LKR+GEKLELA
Sbjct: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+ I Q  PIRITKNLRVCGDCHTFC
Sbjct: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IEQRTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 624

[Close]
BLAST of Lcy06g019880 vs. ExPASy TrEMBL
Match: A0A1S3B7F2 (pentatricopeptide repeat-containing protein At2g33760-like OS=Cucumis melo OX=3656 GN=LOC103486628 PE=3 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 526/633 (83.10%), Postives = 564/633 (89.10%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSK Q+IFI+HGK RFSSAS         +S Q DVN +SNEP+  TQES+SS +LH+
Sbjct: 1   MLKSKCQHIFINHGKLRFSSAS---------LSWQFDVNCNSNEPTPCTQESESSHVLHY 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
           DPKRF  +LLSCRNLFQ+RQVHAQIA+ GAFRNL +ANKLLF+Y + GALEDA+ELFD M
Sbjct: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++RDPYSWS+IVGGYAK+GDF SCF MFREL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 SKRDPYSWSIIVGGYAKVGDFFSCFWMFRELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           LIHC TLKCGLDY  FVCASLVDMYARCKVIEDARQ+F KM KRDL TWTVMIGALAE  
Sbjct: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
             VESLA FD MRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT +SLDVILGT
Sbjct: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVDSAR IFD+MQV+NVITWSAMIAAYGYHGQG KA ELFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGV PDVKHYTCMVDLLGRAGR DEAL +
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLAERVA SL +LQ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           +DMAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRS+EIY+ LKR+GEKLELA
Sbjct: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+ I Q  PIRITKNLRVCGDCHTFC
Sbjct: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IEQRTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 624

[Close]
BLAST of Lcy06g019880 vs. NCBI nr
Match: XP_023540820.1 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 582/633 (91.94%), Postives = 602/633 (95.10%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSKSQ IFI+HGK RFSSASAT   KEA ISSQ +VNNHSNEP+S TQESQSSFLL+F
Sbjct: 1   MLKSKSQIIFINHGKRRFSSASATTPVKEASISSQFNVNNHSNEPNSFTQESQSSFLLYF 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
            PKRF+T LLSCRNLFQIRQVH  IAS+GAFRNL IANKLLF+Y Q+GALEDA ELFDEM
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           TERDPYSWSVIVGGYAK+ DFSSCF MFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR
Sbjct: 121 TERDPYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           +IHCAT KCGLD+DHFVCASLVDMYARCKVIEDARQLFDKM +RDLVTWTVM+GALAEC 
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
           SAVESL LFD MRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTR+ LDVILGT
Sbjct: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVD AREIFDQMQVKNVITWSAMIAAYGYHGQGGKA ELFPMMLSSGILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IESMTVEKDEGLWGALLGACRIHRRLDLA+RVA SLLE+QPQNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVANSLLEIQPQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           EDMAKTRDLMTK GLKKIPGWTWIEVDEKLYQFSVGDKTHPRS+EIYE LKR+GEKLELA
Sbjct: 481 EDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLI IP D PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVSSIE+RTIILRDANRFHHFKEGACSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 633

[Close]
BLAST of Lcy06g019880 vs. NCBI nr
Match: XP_023005935.1 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 579/633 (91.47%), Postives = 599/633 (94.63%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSK QNIFI+HGK RFSSASAT   KEA ISSQ +VNNHSNEP+SSTQESQSSFLL+F
Sbjct: 1   MLKSKRQNIFINHGKLRFSSASATTPVKEASISSQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
            PKRF+T LLSCRNLFQIRQVH  IAS+GAFRNL IANKLLF+Y Q+GALEDA ELFDEM
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           TERDPYSWSVIVGGYAK+ DFSSCF MFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR
Sbjct: 121 TERDPYSWSVIVGGYAKVKDFSSCFSMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           +IHCAT KCGLD+DHFVCASLVDMYARCKVIEDARQLFDKM +RDLVTWTVM+GALAEC 
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
           SAVESL LFD MR EGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRF LDVILGT
Sbjct: 241 SAVESLTLFDRMRVEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFCLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVD AREIFDQMQ+KNVITWSAMIAAYGYHGQGGKA +LFPMMLSSGILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQMKNVITWSAMIAAYGYHGQGGKALKLFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IESMTVEKDEGLWGALLGACRIHRRLDLA+RVA SLLELQPQNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           EDMAKTRDLMTK GLKKIPGWTWIEVDEKLYQFSVGDKTHPRS+EIY  LKR+ EKLELA
Sbjct: 481 EDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYVMLKRVDEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLI IP D PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVSSIE+RTIILRDANRFHHFKEG CSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGGCSCRDYW 633

[Close]
BLAST of Lcy06g019880 vs. NCBI nr
Match: KAG6596581.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 579/633 (91.47%), Postives = 600/633 (94.79%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSKSQ IFI++GK RFSSASAT   KEA IS Q +VNNHSNEP+SSTQESQSSFLL+F
Sbjct: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
            PKRF+T LLSCRNLFQIRQVH  IAS+GAFRNL IANKLLF+Y Q+GALEDA ELFDEM
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           TERD YSWSVIVGGYAK+ DFSSCF MFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR
Sbjct: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           +IHCAT KCGLD+DHFVCASLVDMYARCKVIEDARQLFDKM +RDLVTWTVM+GALAEC 
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
           SAVESL LFD MRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTR+ LDVILGT
Sbjct: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVD AREIFDQMQVKNVITWSAMIAAYGYHGQGGKA ELFPMMLSSGILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGVRPDVKHYTCMVDLLGRAGRFDEAL L
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IESMTVEKDEGLWGALLGACRIHRRLDLA+RVA SLLELQPQNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           +DMAKTRDLMTK GLKKIPGWTWIEVDEKLYQFSVGDKTHPRS+EIYE LKR+GEKLELA
Sbjct: 481 KDMAKTRDLMTKSGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLI IP D PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVSSIE+RTIILRDANRFHHFKEGACSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 633

[Close]
BLAST of Lcy06g019880 vs. NCBI nr
Match: XP_022938843.1 (pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita moschata] >KAG7028119.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1192.2 bits (3083), Expect = 0.0e+00
Identity = 579/633 (91.47%), Postives = 600/633 (94.79%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSKSQ IFI++GK RFSSASAT   KEA IS Q +VNNHSNEP+SSTQESQSSFLL+F
Sbjct: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
            PKRF+T LLSCRNLFQIRQVH  IAS+GAFRNL IANKLLF+Y Q+GALEDA ELFDEM
Sbjct: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           TERD YSWSVIVGGYAK+ DFSSCF MFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR
Sbjct: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           +IHCAT KCGLD+DHFVCASLVDMYARCKVIEDARQLFDKM +RDLVTWTVM+GALAEC 
Sbjct: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
           SAVESL LFD MRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTR+ LDVILGT
Sbjct: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVD AREIFDQMQVKNVITWSAMIAAYGYHGQGGKA ELFPMMLSSGILP
Sbjct: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGVRPDVKHYTCMVDLLGRAGRFDEAL L
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IESMTVEKDEGLWGALLGACRIHRRLDLA+RVA SLLELQPQNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           +DMAKTRDLMTK GLKKIPGWTWIEVDEKLYQFSVGDKTHPRS+EIYE LKR+GEKLELA
Sbjct: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLI IP D PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVSSIE+RTIILRDANRFHHFKEGACSCRDYW
Sbjct: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 633

[Close]
BLAST of Lcy06g019880 vs. NCBI nr
Match: XP_038903368.1 (pentatricopeptide repeat-containing protein At2g33760-like [Benincasa hispida])

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 567/633 (89.57%), Postives = 598/633 (94.47%), Query Frame = 0 

Query: 1   MLKSKSQNIFISHGKFRFSSASATATAKEAFISSQIDVNNHSNEPSSSTQESQSSFLLHF 60
           MLKSK  NIFI+HGK RFSSASAT TA+E F+SS+ D N +SNEP+SSTQES+SS++LHF
Sbjct: 1   MLKSKCSNIFINHGKLRFSSASATTTARETFLSSESDANCNSNEPNSSTQESESSYVLHF 60

Query: 61  DPKRFLTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEM 120
           DPKRF+T  LSCRNLFQ+RQVHAQIAS GAFRNL +ANKLLF+Y QHGALEDA  LFDEM
Sbjct: 61  DPKRFITLFLSCRNLFQVRQVHAQIASNGAFRNLAVANKLLFMYAQHGALEDAHVLFDEM 120

Query: 121 TERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           TERDPYSWSVIVGGYAK+GDFSSCF MFREL+R GMPLDNYT PIVIRACR+ K LQFGR
Sbjct: 121 TERDPYSWSVIVGGYAKVGDFSSCFWMFRELLRYGMPLDNYTAPIVIRACRNSKGLQFGR 180

Query: 181 LIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECR 240
           LIHC TLKCGLDYDHFVCASLVDMYARCKVIEDARQ+FDKMQKRDLVTWTVMIGALAEC+
Sbjct: 181 LIHCVTLKCGLDYDHFVCASLVDMYARCKVIEDARQVFDKMQKRDLVTWTVMIGALAECK 240

Query: 241 SAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGT 300
           SAVESLALFD MRDEGIVPDKVALVTVVYACAKLGAMNKARAIH+YINGTRFSLDVILGT
Sbjct: 241 SAVESLALFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHNYINGTRFSLDVILGT 300

Query: 301 AMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILP 360
           AMIDMYAKCGSVDSAREIFDQMQV+NVITWSAMIAAYGYHGQG KA EL PMMLSSGILP
Sbjct: 301 AMIDMYAKCGSVDSAREIFDQMQVRNVITWSAMIAAYGYHGQGEKALELLPMMLSSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGL 420
           NRITFVSLLYACSHAGLIEEGQRFF SMW++YGVRPDVKHYTCMVDLLGRAGR DEALGL
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFFSMWNDYGVRPDVKHYTCMVDLLGRAGRLDEALGL 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKW 480
           IESM VEKDEGLWGALLGACRIH+ LDLAERVARSLLEL+PQNPGHYVLLSNIYANAGKW
Sbjct: 421 IESMAVEKDEGLWGALLGACRIHQHLDLAERVARSLLELEPQNPGHYVLLSNIYANAGKW 480

Query: 481 EDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELA 540
           E+MAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRS+EIY+ LKRLGEK+ELA
Sbjct: 481 ENMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYKLLKRLGEKIELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFC 600
           GYVPDT  VLHDVDEEVKQGLLYAHSEKLAI FGL+AIPQ+ PIRITKNLRVCGDCHTFC
Sbjct: 541 GYVPDTKCVLHDVDEEVKQGLLYAHSEKLAITFGLLAIPQNYPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           KFVSS+EQRTIILRDANRFHHFKEG CSCRDYW
Sbjct: 601 KFVSSVEQRTIILRDANRFHHFKEGVCSCRDYW 633

[Close]
BLAST of Lcy06g019880 vs. TAIR 10
Match: AT5G16860.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 484.2 bits (1245), Expect = 1.6e-136
Identity = 236/602 (39.20%), Postives = 354/602 (58.80%), Query Frame = 0 

Query: 79  RQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEMTERDPYSWSVIVGGYAKI 138
           +Q+H    ++   +N+ + N L+ +Y + G +++A  +F  M+ +D  SW+ +V GY++I
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308

Query: 139 GDFSSCFRMF-----------------------------------RELVRCGMPLDNYTL 198
           G F    R+F                                   R+++  G+  +  TL
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368

Query: 199 PIVIRACRDLKDLQFGRLIHCATLKCGLDY-------DHFVCASLVDMYARCKVIEDARQ 258
             V+  C  +  L  G+ IHC  +K  +D        ++ V   L+DMYA+CK ++ AR 
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428

Query: 259 LFDKM--QKRDLVTWTVMIGALAECRSAVESLALFDSMRDEGIV--PDKVALVTVVYACA 318
           +FD +  ++RD+VTWTVMIG  ++   A ++L L   M +E     P+   +   + ACA
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488

Query: 319 KLGAMNKARAIHDY-INGTRFSLDVILGTAMIDMYAKCGSVDSAREIFDQMQVKNVITWS 378
            L A+   + IH Y +   + ++ + +   +IDMYAKCGS+  AR +FD M  KN +TW+
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548

Query: 379 AMIAAYGYHGQGGKAFELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDE 438
           +++  YG HG G +A  +F  M   G   + +T + +LYACSH+G+I++G  +F+ M   
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608

Query: 439 YGVRPDVKHYTCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGALLGACRIHRRLDLAER 498
           +GV P  +HY C+VDLLGRAGR + AL LIE M +E    +W A L  CRIH +++L E 
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEY 668

Query: 499 VARSLLELQPQNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLY 558
            A  + EL   + G Y LLSN+YANAG+W+D+ + R LM   G+KK PG +W+E  +   
Sbjct: 669 AAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728

Query: 559 QFSVGDKTHPRSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAI 618
            F VGDKTHP + EIY+ L    ++++  GYVP+T + LHDVD+E K  LL+ HSEKLA+
Sbjct: 729 TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLAL 788

Query: 619 AFGLIAIPQDNPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDANRFHHFKEGACSCRD 634
           A+G++  PQ   IRITKNLRVCGDCHT   ++S I    IILRD++RFHHFK G+CSC+ 
Sbjct: 789 AYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKG 848

[Close]
BLAST of Lcy06g019880 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 483.0 bits (1242), Expect = 3.6e-136
Identity = 224/538 (41.64%), Postives = 341/538 (63.38%), Query Frame = 0 

Query: 96  IANKLLFIYTQHGALEDARELFDEMTERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCG 155
           + N L+ +Y +   L DA +LFD+M +R+  SW+ ++  Y+K         +   ++R  
Sbjct: 98  LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157

Query: 156 MPLDNYTLPIVIRACRDLKDLQFGRLIHCATLKCGLDYDHFVCASLVDMYARCKVIEDAR 215
           +  + YT   V+R+C  + D+   R++HC  +K GL+ D FV ++L+D++A+    EDA 
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 217

Query: 216 QLFDKMQKRDLVTWTVMIGALAECRSAVESLALFDSMRDEGIVPDKVALVTVVYACAKLG 275
            +FD+M   D + W  +IG  A+   +  +L LF  M+  G + ++  L +V+ AC  L 
Sbjct: 218 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 277

Query: 276 AMNKARAIHDYINGTRFSLDVILGTAMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIA 335
            +      H +I   ++  D+IL  A++DMY KCGS++ A  +F+QM+ ++VITWS MI+
Sbjct: 278 LLELGMQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 337

Query: 336 AYGYHGQGGKAFELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVR 395
               +G   +A +LF  M SSG  PN IT V +L+ACSHAGL+E+G  +F SM   YG+ 
Sbjct: 338 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 397

Query: 396 PDVKHYTCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGALLGACRIHRRLDLAERVARS 455
           P  +HY CM+DLLG+AG+ D+A+ L+  M  E D   W  LLGACR+ R + LAE  A+ 
Sbjct: 398 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 457

Query: 456 LLELQPQNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSV 515
           ++ L P++ G Y LLSNIYAN+ KW+ + + R  M   G+KK PG +WIEV+++++ F +
Sbjct: 458 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 517

Query: 516 GDKTHPRSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGL 575
           GD +HP+  E+ + L +L  +L   GYVP+TN+VL D++ E  +  L  HSEKLA+AFGL
Sbjct: 518 GDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 577

Query: 576 IAIPQDNPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
           + +P +  IRI KNLR+CGDCH FCK  S +E R+I++RD  R+HHF++G CSC DYW
Sbjct: 578 MTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

[Close]
BLAST of Lcy06g019880 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 482.6 bits (1241), Expect = 4.7e-136
Identity = 220/532 (41.35%), Postives = 344/532 (64.66%), Query Frame = 0 

Query: 104 YTQHGALEDARELFDEMTERDPYSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTL 163
           Y   G +E+A++LFDE+  +D  SW+ ++ GYA+ G++     +F+++++  +  D  T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269

Query: 164 PIVIRACRDLKDLQFGRLIHCATLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQK 223
             V+ AC     ++ GR +H      G   +  +  +L+D+Y++C  +E A  LF+++  
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329

Query: 224 RDLVTWTVMIGALAECRSAVESLALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAI 283
           +D+++W  +IG         E+L LF  M   G  P+ V +++++ ACA LGA++  R I
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389

Query: 284 HDYINGTRFSLD--VILGTAMIDMYAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHG 343
           H YI+     +     L T++IDMYAKCG +++A ++F+ +  K++ +W+AMI  +  HG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449

Query: 344 QGGKAFELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHY 403
           +   +F+LF  M   GI P+ ITFV LL ACSH+G+++ G+  F +M  +Y + P ++HY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509

Query: 404 TCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGALLGACRIHRRLDLAERVARSLLELQP 463
            CM+DLLG +G F EA  +I  M +E D  +W +LL AC++H  ++L E  A +L++++P
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP 569

Query: 464 QNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHP 523
           +NPG YVLLSNIYA+AG+W ++AKTR L+   G+KK+PG + IE+D  +++F +GDK HP
Sbjct: 570 ENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHP 629

Query: 524 RSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQD 583
           R+ EIY  L+ +   LE AG+VPDT+ VL +++EE K+G L  HSEKLAIAFGLI+    
Sbjct: 630 RNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPG 689

Query: 584 NPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDANRFHHFKEGACSCRDYW 634
             + I KNLRVC +CH   K +S I +R II RD  RFHHF++G CSC DYW
Sbjct: 690 TKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]
BLAST of Lcy06g019880 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 479.6 bits (1233), Expect = 4.0e-135
Identity = 235/568 (41.37%), Postives = 339/568 (59.68%), Query Frame = 0 

Query: 66  LTALLSCRNLFQIRQVHAQIASTGAFRNLPIANKLLFIYTQHGALEDARELFDEMTERDP 125
           L A+   + L    Q+H+    TG + +  +    + +Y++ G ++    LF E  + D 
Sbjct: 228 LPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDI 287

Query: 126 YSWSVIVGGYAKIGDFSSCFRMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRLIHCA 185
            +++ ++ GY   G+      +F+EL+  G  L + TL  ++     L  +     IH  
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGY 347

Query: 186 TLKCGLDYDHFVCASLVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECRSAVES 245
            LK        V  +L  +Y++   IE AR+LFD+  ++ L +W  MI    +     ++
Sbjct: 348 CLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 407

Query: 246 LALFDSMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILGTAMIDM 305
           ++LF  M+     P+ V +  ++ ACA+LGA++  + +HD +  T F   + + TA+I M
Sbjct: 408 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 467

Query: 306 YAKCGSVDSAREIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILPNRITF 365
           YAKCGS+  AR +FD M  KN +TW+ MI+ YG HGQG +A  +F  ML+SGI P  +TF
Sbjct: 468 YAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTF 527

Query: 366 VSLLYACSHAGLIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGLIESMT 425
           + +LYACSHAGL++EG   F+SM   YG  P VKHY CMVD+LGRAG    AL  IE+M+
Sbjct: 528 LCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS 587

Query: 426 VEKDEGLWGALLGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKWEDMAK 485
           +E    +W  LLGACRIH+  +LA  V+  L EL P N G++VLLSNI++    +   A 
Sbjct: 588 IEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAAT 647

Query: 486 TRDLMTKGGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELAGYVPD 545
            R    K  L K PG+T IE+ E  + F+ GD++HP+  EIYE L++L  K+  AGY P+
Sbjct: 648 VRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPE 707

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFCKFVSS 605
           T   LHDV+EE ++ ++  HSE+LAIAFGLIA      IRI KNLRVC DCHT  K +S 
Sbjct: 708 TELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISK 767

Query: 606 IEQRTIILRDANRFHHFKEGACSCRDYW 634
           I +R I++RDANRFHHFK+G CSC DYW
Sbjct: 768 ITERVIVVRDANRFHHFKDGVCSCGDYW 792

[Close]
BLAST of Lcy06g019880 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 479.2 bits (1232), Expect = 5.2e-135
Identity = 238/617 (38.57%), Postives = 370/617 (59.97%), Query Frame = 0 

Query: 28  KEAFISSQIDVNNHSNEPSSSTQESQSSFLLHFDPKRFLTALLSC---RNLFQIRQVHAQ 87
           KE  +   I V +  + PS  T E                 +L C    +L    +VH  
Sbjct: 58  KEGKLKQAIRVLSQESSPSQQTYE---------------LLILCCGHRSSLSDALRVHRH 117

Query: 88  IASTGAFRNLPIANKLLFIYTQHGALEDARELFDEMTERDPYSWSVIVGGYAKIGDFSSC 147
           I   G+ ++  +A KL+ +Y+  G+++ AR++FD+  +R  Y W+ +       G     
Sbjct: 118 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 177

Query: 148 FRMFRELVRCGMPLDNYTLPIVIRAC----RDLKDLQFGRLIHCATLKCGLDYDHFVCAS 207
             ++ ++ R G+  D +T   V++AC      +  L  G+ IH    + G     ++  +
Sbjct: 178 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 237

Query: 208 LVDMYARCKVIEDARQLFDKMQKRDLVTWTVMIGALAECRSAVESLALFDSMRDE--GIV 267
           LVDMYAR   ++ A  +F  M  R++V+W+ MI   A+   A E+L  F  M  E     
Sbjct: 238 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 297

Query: 268 PDKVALVTVVYACAKLGAMNKARAIHDYINGTRFSLDVILG--TAMIDMYAKCGSVDSAR 327
           P+ V +V+V+ ACA L A+ + + IH YI   R  LD IL   +A++ MY +CG ++  +
Sbjct: 298 PNSVTMVSVLQACASLAALEQGKLIHGYI--LRRGLDSILPVISALVTMYGRCGKLEVGQ 357

Query: 328 EIFDQMQVKNVITWSAMIAAYGYHGQGGKAFELFPMMLSSGILPNRITFVSLLYACSHAG 387
            +FD+M  ++V++W+++I++YG HG G KA ++F  ML++G  P  +TFVS+L ACSH G
Sbjct: 358 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 417

Query: 388 LIEEGQRFFSSMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALGLIESMTVEKDEGLWGAL 447
           L+EEG+R F +MW ++G++P ++HY CMVDLLGRA R DEA  +++ M  E    +WG+L
Sbjct: 418 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 477

Query: 448 LGACRIHRRLDLAERVARSLLELQPQNPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLK 507
           LG+CRIH  ++LAER +R L  L+P+N G+YVLL++IYA A  W+++ + + L+   GL+
Sbjct: 478 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 537

Query: 508 KIPGWTWIEVDEKLYQFSVGDKTHPRSAEIYETLKRLGEKLELAGYVPDTNYVLHDVDEE 567
           K+PG  W+EV  K+Y F   D+ +P   +I+  L +L E ++  GY+P T  VL++++ E
Sbjct: 538 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 597

Query: 568 VKQGLLYAHSEKLAIAFGLIAIPQDNPIRITKNLRVCGDCHTFCKFVSSIEQRTIILRDA 627
            K+ ++  HSEKLA+AFGLI   +  PIRITKNLR+C DCH F KF+S   ++ I++RD 
Sbjct: 598 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 657

Query: 628 NRFHHFKEGACSCRDYW 634
           NRFH FK G CSC DYW
Sbjct: 658 NRFHRFKNGVCSCGDYW 657

The following BLAST results are available for this feature:
BLAST of Lcy06g019880 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LFL52.3e-13539.20Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana OX... [more]
Q9M1V33.0e-13542.07Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
Q9SI535.1e-13541.64Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
Q9LN016.6e-13541.35Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9SUH65.6e-13441.37Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
BLAST of Lcy06g019880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KYT50.0e+0091.47pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbi... [more]
A0A6J1FK200.0e+0091.47pentatricopeptide repeat-containing protein At2g33760-like isoform X1 OS=Cucurbi... [more]
A0A6J1CTP50.0e+0089.59pentatricopeptide repeat-containing protein At2g33760-like OS=Momordica charanti... [more]
A0A5D3DNV60.0e+0083.10Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B7F20.0e+0083.10pentatricopeptide repeat-containing protein At2g33760-like OS=Cucumis melo OX=36... [more]
BLAST of Lcy06g019880 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023540820.10.0e+0091.94pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita... [more]
XP_023005935.10.0e+0091.47pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita... [more]
KAG6596581.10.0e+0091.47Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_022938843.10.0e+0091.47pentatricopeptide repeat-containing protein At2g33760-like isoform X1 [Cucurbita... [more]
XP_038903368.10.0e+0089.57pentatricopeptide repeat-containing protein At2g33760-like [Benincasa hispida][more]
BLAST of Lcy06g019880 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G16860.11.6e-13639.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G03880.13.6e-13641.64Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.14.7e-13641.35Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G30700.14.0e-13541.37Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G46790.15.2e-13538.57Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 197..227
e-value: 8.5E-5
score: 20.5
coord: 328..361
e-value: 3.1E-5
score: 21.9
coord: 300..326
e-value: 7.3E-5
score: 20.7
coord: 126..159
e-value: 1.6E-4
score: 19.6
coord: 401..425
e-value: 1.1E-4
score: 20.1
coord: 227..260
e-value: 1.8E-6
score: 25.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 325..373
e-value: 2.6E-9
score: 37.2
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 393..424
e-value: 1.3E-5
score: 24.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 227..257
e-value: 2.7E-4
score: 21.0
coord: 126..155
e-value: 5.0E-4
score: 20.1
coord: 100..123
e-value: 0.013
score: 15.7
coord: 200..225
e-value: 0.012
score: 15.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 397..427
score: 8.845827
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 225..259
score: 11.213468
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..396
score: 8.758137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 124..158
score: 10.413293
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..224
score: 9.032168
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..325
score: 8.889672
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 11.158661
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 391..512
e-value: 2.8E-14
score: 55.3
coord: 279..390
e-value: 4.7E-29
score: 103.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 30..178
e-value: 4.6E-20
score: 73.7
coord: 179..278
e-value: 6.8E-22
score: 79.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 103..482
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 499..623
e-value: 8.8E-42
score: 142.0
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..606
NoneNo IPR availablePANTHERPTHR47928:SF52TRANSCRIPT PROCESSING PROTEIN, PUTATIVE-RELATEDcoord: 1..606

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g019880.1Lcy06g019880.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding