Lcy06g019450 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g019450
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NDR1/HIN1-like protein 3
Location	Chr06: 44073382 .. 44073954 (+)
RNA-Seq Expression	Lcy06g019450
Synteny	Lcy06g019450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGAAGTAAGAAGTGCATCATATTCGTCGCCATTATCATCGTAGTTTTGGTCAGTGCCATTTCCTTGTTCGTCTTATGGCTCATCACCATGACCCACAAGGTCAAGTTCCATGTGATCGACGCCGACCTGACCCGGTTCAACTTCACCGACGACAGCCGACTCCTCTTCGACCTCGGCGTCAACATGACAGTCAAAAACCCTAATCGTGCCTTCGGAGTTTTTTTCGACAGCATCGATGTCGCCGTGCTGTATCAGGACATAAAGTTCAGCAACATGTCGCTGTCGCCTTTCTACCAAGGCCAAGATGGCTCGAGGCTGCTCAAAATGAAGTTCGATGGTCAGCAATTGATGAACCTCGACGCCCAGCAGCTTGCTGTGTTTGCTCTCGAGAAACTTGTTGACGTCTTCACCCTTAAATTGGAGCTTCGTCTTCAGATGAGGGTAAATATTGGCCTCATTAAGATCAAACTCAAGCCCAAGGTTCGTTGTGGATTTGATGTTCCCTTGGTTTCGCGAGGAAGATCGTTTCTTCGATTTCAGATTATCGGCTGCTATGTCGCTTATTGA

mRNA sequence

ATGTCAAGAAGTAAGAAGTGCATCATATTCGTCGCCATTATCATCGTAGTTTTGGTCAGTGCCATTTCCTTGTTCGTCTTATGGCTCATCACCATGACCCACAAGGTCAAGTTCCATGTGATCGACGCCGACCTGACCCGGTTCAACTTCACCGACGACAGCCGACTCCTCTTCGACCTCGGCGTCAACATGACAGTCAAAAACCCTAATCGTGCCTTCGGAGTTTTTTTCGACAGCATCGATGTCGCCGTGCTGTATCAGGACATAAAGTTCAGCAACATGTCGCTGTCGCCTTTCTACCAAGGCCAAGATGGCTCGAGGCTGCTCAAAATGAAGTTCGATGGTCAGCAATTGATGAACCTCGACGCCCAGCAGCTTGCTGTGTTTGCTCTCGAGAAACTTGTTGACGTCTTCACCCTTAAATTGGAGCTTCGTCTTCAGATGAGGGTAAATATTGGCCTCATTAAGATCAAACTCAAGCCCAAGGTTCGTTGTGGATTTGATGTTCCCTTGGTTTCGCGAGGAAGATCGTTTCTTCGATTTCAGATTATCGGCTGCTATGTCGCTTATTGA

Coding sequence (CDS)

ATGTCAAGAAGTAAGAAGTGCATCATATTCGTCGCCATTATCATCGTAGTTTTGGTCAGTGCCATTTCCTTGTTCGTCTTATGGCTCATCACCATGACCCACAAGGTCAAGTTCCATGTGATCGACGCCGACCTGACCCGGTTCAACTTCACCGACGACAGCCGACTCCTCTTCGACCTCGGCGTCAACATGACAGTCAAAAACCCTAATCGTGCCTTCGGAGTTTTTTTCGACAGCATCGATGTCGCCGTGCTGTATCAGGACATAAAGTTCAGCAACATGTCGCTGTCGCCTTTCTACCAAGGCCAAGATGGCTCGAGGCTGCTCAAAATGAAGTTCGATGGTCAGCAATTGATGAACCTCGACGCCCAGCAGCTTGCTGTGTTTGCTCTCGAGAAACTTGTTGACGTCTTCACCCTTAAATTGGAGCTTCGTCTTCAGATGAGGGTAAATATTGGCCTCATTAAGATCAAACTCAAGCCCAAGGTTCGTTGTGGATTTGATGTTCCCTTGGTTTCGCGAGGAAGATCGTTTCTTCGATTTCAGATTATCGGCTGCTATGTCGCTTATTGA

Protein sequence

MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLRFQIIGCYVAY

Homology

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BLAST of Lcy06g019450 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.0e-23
Identity = 65/185 (35.14%), Postives = 104/185 (56.22%), Query Frame = 0


Query: 8   IIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVK 67
           +IF  +I + ++  I+  ++WLI   + +KFHV DA LT F     + L ++L +N T++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 68  NPNRAFGVFFDSIDVAVLYQDIKFS-NMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQL 127
           NPNR  GV++D I+V   Y D +F  + ++S FYQG   + ++  K  GQQL+ LD  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 128 AVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRCGFDVPLVSRGRSFLRFQIIG 187
                +    ++ +  +LRL++R   GLIK  + KPK++C   VPL S   S   FQ   
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTK 226

Query: 188 CYVAY 191
           C V +
Sbjct: 227 CDVDF 231

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BLAST of Lcy06g019450 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-21
Identity = 56/160 (35.00%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 9   IFVAIII-VVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTD-DSRLLFDLGVNMTV 68
           +FV +II ++++  ++  + WLI     +KFHV DA LTRF+ T  D+ L ++L + + V
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 69  KNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQL 128
           +NPN+  G+++D I+    Y+  +FS ++L+PFYQG   + +L   F GQ L+  +A Q 
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS 159

Query: 129 AVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRC 166
                E++  V+ ++++ RL++R  +G +K  ++KPKV C
Sbjct: 160 RTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]

BLAST of Lcy06g019450 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-20
Identity = 61/183 (33.33%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 7   CIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTV 66
           C I +A+ +++ V+A+   +LWLI   + VKF+V DA+L RF+F  ++ L + L +N T+
Sbjct: 56  CNILIAVAVILGVAAL---ILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTI 115

Query: 67  KNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQL 126
           +NPN+  GV++D   V+  Y D +F + ++S FYQG   + ++  K +GQ L+ L     
Sbjct: 116 RNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGAR 175

Query: 127 AVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRC-GFDVPL-VSRGRSFLRFQI 186
                ++   ++ +  +LRL +R     IK  KLKPK++C    +PL  S      +FQ 
Sbjct: 176 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQP 235

[Close]

BLAST of Lcy06g019450 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 33  THKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFS 92
           ++ VKF V DA+LT F+   ++ L + L +N++++N   + G+ +D  +  V Y + +  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLG 63

Query: 93  NMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQLAVFALEKLVDVFTLKLELRLQMRVNI 152
            + +  FY G   + LL+  F+GQ L+ L   +   F  ++   V+ + ++L +  RV +
Sbjct: 64  AVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVMV 123

Query: 153 -GLIKIKLKPKVRCGFDVPL 172
             L+   +KP VRC   +PL
Sbjct: 124 LHLVTWPMKPVVRCHLKIPL 143

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BLAST of Lcy06g019450 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-08
Identity = 43/162 (26.54%), Postives = 80/162 (49.38%), Query Frame = 0


Query: 7   CIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTV 66
           C  F  ++++V+    S+ +L+L+       + +    LTRF    DS L     V +T 
Sbjct: 67  CYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITA 126

Query: 67  KNPNRAFGVFF-DSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQ 126
           KNPN   G+++ D   + V Y + + SN SL  FYQG + + ++ ++  G Q  N    +
Sbjct: 127 KNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTG-QTQNASGLR 186

Query: 127 LAVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRCG 167
             +   ++      L++ +   +RV  G +K+ +++  VRCG
Sbjct: 187 TTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCG 227

[Close]

BLAST of Lcy06g019450 vs. ExPASy TrEMBL
Match: A0A6J1H1R7 (NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.1e-75
Identity = 150/190 (78.95%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDL 60
           MSR+KKC+I   III+VLV  +SL ++WLITM +K+KFHVIDADLT+FNFTDD +LLFDL
Sbjct: 1   MSRTKKCMIIFLIIILVLV-LLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQLLFDL 60

Query: 61  GVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMN 120
            VNM VKNPNRAFGVFFD I+V VLYQDIKFSN SLSPFYQ QDGS+LLK+KFDGQQLMN
Sbjct: 61  TVNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQLMN 120

Query: 121 LDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLR 180
           L+A+QLAVF LEKLV+ FTLKLELRLQ+RVNI LIKIKLKPKVRCG ++PL+SRGR+FLR
Sbjct: 121 LNAEQLAVFGLEKLVETFTLKLELRLQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTFLR 180

Query: 181 FQIIGCYVAY 191
           FQIIGC+VAY
Sbjct: 181 FQIIGCHVAY 189

[Close]

BLAST of Lcy06g019450 vs. ExPASy TrEMBL
Match: A0A6J1KYH7 (NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74
Identity = 147/190 (77.37%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 1   MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDL 60
           MSR+KKC+I   III+VLV  +SL ++WLITM +K+KFHVI ADLT+FNFTDD++LLFDL
Sbjct: 1   MSRTKKCMIIFLIIILVLV-LLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDL 60

Query: 61  GVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMN 120
            VNM VKNPNRAFGVFFD I+V +LYQDIKFSN S+SPFYQGQDGS+LLK+KFDGQQLMN
Sbjct: 61  TVNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMN 120

Query: 121 LDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLR 180
           L+A+QLAVF LEKLV++FTLKLELRLQ+RVNI LIKIKLKPKV CG ++PL+SRGR+FLR
Sbjct: 121 LNAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLR 180

Query: 181 FQIIGCYVAY 191
           FQIIGC+VAY
Sbjct: 181 FQIIGCHVAY 189

[Close]

BLAST of Lcy06g019450 vs. ExPASy TrEMBL
Match: A0A5D3DNY5 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004460 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.4e-67
Identity = 136/190 (71.58%), Postives = 164/190 (86.32%), Query Frame = 0


Query: 1   MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDL 60
           MSR+KK IIF  I+IV+++  ISLF+LWL+TMT K+KF V +A LT+FN T+ S+LLF L
Sbjct: 1   MSRTKKFIIFSIIVIVLIL--ISLFILWLMTMTRKLKFQVNNAKLTKFNLTNGSQLLFQL 60

Query: 61  GVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMN 120
            +NM V+NPNR FGVFFDSI+VAVLYQDIKFSNMSLSPFYQG++G  LL  +FDGQQLMN
Sbjct: 61  SLNMMVQNPNRGFGVFFDSIEVAVLYQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMN 120

Query: 121 LDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLR 180
           LDA+QLAVF LEKLVD+F++K+ELRL MRV IG I+IKL PKVRCG ++PLVS GRSFLR
Sbjct: 121 LDAEQLAVFTLEKLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLVSHGRSFLR 180

Query: 181 FQIIGCYVAY 191
           F+IIGC+VAY
Sbjct: 181 FRIIGCFVAY 188

[Close]

BLAST of Lcy06g019450 vs. ExPASy TrEMBL
Match: A0A5A7TKH6 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001570 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60
Identity = 118/161 (73.29%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 30  ITMTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVKNPNRAFGVFFDSIDVAVLYQDI 89
           +TMT K+KF V +A LT+FN T+ S+LLF L +NM V+NPNR FGVFFDSI+VAVLYQDI
Sbjct: 1   MTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDI 60

Query: 90  KFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQLAVFALEKLVDVFTLKLELRLQMR 149
           KFSNMSLSPFYQG++G  LL  +FDGQQLMNLDA+QLAVF LEKLVD+F++K+ELRL MR
Sbjct: 61  KFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMR 120

Query: 150 VNIGLIKIKLKPKVRCGFDVPLVSRGRSFLRFQIIGCYVAY 191
           V IG I+IKL PKVRCG ++PLVS GRSFLRF+IIGC+VAY
Sbjct: 121 VKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 161

[Close]

BLAST of Lcy06g019450 vs. ExPASy TrEMBL
Match: A0A1S3B7X9 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 8.3e-60
Identity = 117/159 (73.58%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 32  MTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVKNPNRAFGVFFDSIDVAVLYQDIKF 91
           MT K+KF V +A LT+FN T+ S+LLF L +NM V+NPNR FGVFFDSI+VAVLYQDIKF
Sbjct: 1   MTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDIKF 60

Query: 92  SNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQLAVFALEKLVDVFTLKLELRLQMRVN 151
           SNMSLSPFYQG++G  LL  +FDGQQLMNLDA+QLAVF LEKLVD+F++K+ELRL MRV 
Sbjct: 61  SNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMRVK 120

Query: 152 IGLIKIKLKPKVRCGFDVPLVSRGRSFLRFQIIGCYVAY 191
           IG I+IKL PKVRCG ++PLVS GRSFLRF+IIGC+VAY
Sbjct: 121 IGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 159

[Close]

BLAST of Lcy06g019450 vs. NCBI nr
Match: XP_022957840.1 (NDR1/HIN1-like protein 3 [Cucurbita moschata])

HSP 1 Score: 291.2 bits (744), Expect = 6.5e-75
Identity = 150/190 (78.95%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDL 60
           MSR+KKC+I   III+VLV  +SL ++WLITM +K+KFHVIDADLT+FNFTDD +LLFDL
Sbjct: 1   MSRTKKCMIIFLIIILVLV-LLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQLLFDL 60

Query: 61  GVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMN 120
            VNM VKNPNRAFGVFFD I+V VLYQDIKFSN SLSPFYQ QDGS+LLK+KFDGQQLMN
Sbjct: 61  TVNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQAQDGSKLLKLKFDGQQLMN 120

Query: 121 LDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLR 180
           L+A+QLAVF LEKLV+ FTLKLELRLQ+RVNI LIKIKLKPKVRCG ++PL+SRGR+FLR
Sbjct: 121 LNAEQLAVFGLEKLVETFTLKLELRLQIRVNIDLIKIKLKPKVRCGLNLPLISRGRTFLR 180

Query: 181 FQIIGCYVAY 191
           FQIIGC+VAY
Sbjct: 181 FQIIGCHVAY 189

[Close]

BLAST of Lcy06g019450 vs. NCBI nr
Match: XP_023005830.1 (NDR1/HIN1-like protein 3 [Cucurbita maxima])

HSP 1 Score: 288.5 bits (737), Expect = 4.2e-74
Identity = 147/190 (77.37%), Postives = 173/190 (91.05%), Query Frame = 0


Query: 1   MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDL 60
           MSR+KKC+I   III+VLV  +SL ++WLITM +K+KFHVI ADLT+FNFTDD++LLFDL
Sbjct: 1   MSRTKKCMIIFLIIILVLV-LLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDL 60

Query: 61  GVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMN 120
            VNM VKNPNRAFGVFFD I+V +LYQDIKFSN S+SPFYQGQDGS+LLK+KFDGQQLMN
Sbjct: 61  TVNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMN 120

Query: 121 LDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLR 180
           L+A+QLAVF LEKLV++FTLKLELRLQ+RVNI LIKIKLKPKV CG ++PL+SRGR+FLR
Sbjct: 121 LNAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLR 180

Query: 181 FQIIGCYVAY 191
           FQIIGC+VAY
Sbjct: 181 FQIIGCHVAY 189

[Close]

BLAST of Lcy06g019450 vs. NCBI nr
Match: KAG7028146.1 (NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.2 bits (705), Expect = 2.2e-70
Identity = 145/190 (76.32%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDL 60
           MSR+KKC+I   III+VLV  +SL ++WLITM +K+KFHVIDADLT+FNFTDD +LLFDL
Sbjct: 1   MSRTKKCMIIFLIIILVLV-LLSLLIVWLITMANKIKFHVIDADLTQFNFTDDKQLLFDL 60

Query: 61  GVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMN 120
            VNM VKNPNRAFGVFFD I+V VLYQDIKFSN SLSPFYQ QDGS+LLK+KFDGQQLMN
Sbjct: 61  TVNMKVKNPNRAFGVFFDRIEVTVLYQDIKFSNASLSPFYQDQDGSKLLKLKFDGQQLMN 120

Query: 121 LDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLR 180
           L+A+QLAVF LEKLV+ FTLKLEL     +NI LIKIKLKPKVRCG ++PL+SRGR+FLR
Sbjct: 121 LNAEQLAVFGLEKLVETFTLKLEL-----LNIDLIKIKLKPKVRCGLNLPLISRGRTFLR 180

Query: 181 FQIIGCYVAY 191
           FQIIGC+VAY
Sbjct: 181 FQIIGCHVAY 184

[Close]

BLAST of Lcy06g019450 vs. NCBI nr
Match: XP_038904446.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 275.8 bits (704), Expect = 2.8e-70
Identity = 141/190 (74.21%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 1   MSRSKKCIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDL 60
           MSR+KK IIF  IIIV+++  ISLF+LWLIT THK+KF V +A+LT+FNFTDDS+LLF L
Sbjct: 1   MSRTKKFIIFTIIIIVLVL--ISLFILWLITKTHKLKFQVTNANLTQFNFTDDSQLLFQL 60

Query: 61  GVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMN 120
            +NMTVKNPNR FGVFFDSI+V VLYQDIKFSN+SLSPFYQGQ+G  LL + FDGQQLMN
Sbjct: 61  SLNMTVKNPNRGFGVFFDSIEVVVLYQDIKFSNVSLSPFYQGQEGKSLLNLSFDGQQLMN 120

Query: 121 LDAQQLAVFALEKLVDVFTLKLELRLQMRVNIGLIKIKLKPKVRCGFDVPLVSRGRSFLR 180
           LDAQQLAVF LEKL+D+F++KLELRL+MRV IG I+IKL PKVRCG ++PL+S GRSF+R
Sbjct: 121 LDAQQLAVFTLEKLLDIFSIKLELRLRMRVKIGFIRIKLNPKVRCGLNLPLISHGRSFIR 180

Query: 181 FQIIGCYVAY 191
           F+II CYVAY
Sbjct: 181 FRIIDCYVAY 188

[Close]

BLAST of Lcy06g019450 vs. NCBI nr
Match: KAG6596607.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 131/159 (82.39%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 32  MTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVKNPNRAFGVFFDSIDVAVLYQDIKF 91
           M +K+KFHVIDADLT+FNFTDD +LLFDL VNM VKNPNRAFGVFFD I+V VLYQDIKF
Sbjct: 1   MANKIKFHVIDADLTQFNFTDDKQLLFDLTVNMKVKNPNRAFGVFFDRIEVTVLYQDIKF 60

Query: 92  SNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQLAVFALEKLVDVFTLKLELRLQMRVN 151
           SN SLSPFYQ QDGS+LLK+KFDGQQLMNL+A+QLAVF LEKLV+ FTLKLELRLQ+RVN
Sbjct: 61  SNASLSPFYQDQDGSKLLKLKFDGQQLMNLNAEQLAVFGLEKLVETFTLKLELRLQIRVN 120

Query: 152 IGLIKIKLKPKVRCGFDVPLVSRGRSFLRFQIIGCYVAY 191
           I LIKIKLKPKVRCG ++PL+SRGR+FLRFQIIGC+VAY
Sbjct: 121 IDLIKIKLKPKVRCGLNLPLISRGRTFLRFQIIGCHVAY 159

[Close]

BLAST of Lcy06g019450 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-24
Identity = 65/185 (35.14%), Postives = 104/185 (56.22%), Query Frame = 0


Query: 8   IIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVK 67
           +IF  +I + ++  I+  ++WLI   + +KFHV DA LT F     + L ++L +N T++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 68  NPNRAFGVFFDSIDVAVLYQDIKFS-NMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQL 127
           NPNR  GV++D I+V   Y D +F  + ++S FYQG   + ++  K  GQQL+ LD  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 128 AVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRCGFDVPLVSRGRSFLRFQIIG 187
                +    ++ +  +LRL++R   GLIK  + KPK++C   VPL S   S   FQ   
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTK 226

Query: 188 CYVAY 191
           C V +
Sbjct: 227 CDVDF 231

[Close]

BLAST of Lcy06g019450 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-22
Identity = 56/160 (35.00%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 9   IFVAIII-VVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTD-DSRLLFDLGVNMTV 68
           +FV +II ++++  ++  + WLI     +KFHV DA LTRF+ T  D+ L ++L + + V
Sbjct: 40  LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query: 69  KNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQL 128
           +NPN+  G+++D I+    Y+  +FS ++L+PFYQG   + +L   F GQ L+  +A Q 
Sbjct: 100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQS 159

Query: 129 AVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRC 166
                E++  V+ ++++ RL++R  +G +K  ++KPKV C
Sbjct: 160 RTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

[Close]

BLAST of Lcy06g019450 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 98.6 bits (244), Expect = 5.7e-21
Identity = 61/183 (33.33%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 7   CIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTV 66
           C I +A+ +++ V+A+   +LWLI   + VKF+V DA+L RF+F  ++ L + L +N T+
Sbjct: 56  CNILIAVAVILGVAAL---ILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTI 115

Query: 67  KNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQL 126
           +NPN+  GV++D   V+  Y D +F + ++S FYQG   + ++  K +GQ L+ L     
Sbjct: 116 RNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGAR 175

Query: 127 AVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRC-GFDVPL-VSRGRSFLRFQI 186
                ++   ++ +  +LRL +R     IK  KLKPK++C    +PL  S      +FQ 
Sbjct: 176 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQP 235

[Close]

BLAST of Lcy06g019450 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 57/178 (32.02%), Postives = 102/178 (57.30%), Query Frame = 0


Query: 7   CIIFVAIIIVVLVSAISLFVLWLITMTHKVKFHVIDADLTRFNFTDDS-RLLFDLGVNMT 66
           C I + +++ + V A+   +LW I   + VKF V +ADLTRF F   S  L +++ +N +
Sbjct: 55  CNILIGVLVCLGVVAL---ILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFS 114

Query: 67  VKNPNRAFGVFFDSIDVAVLYQDIKFSNMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQ 126
           ++NPN+  G+ +D ++V   Y D +FS  +++ FYQG   + ++  + +GQ+L+ L A  
Sbjct: 115 IRNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGG 174

Query: 127 LAVFALEKLVDVFTLKLELRLQMRVNIGLIKI-KLKPKVRCGFDVPLVSRGRSFLRFQ 183
              F  ++   V+ + ++LR ++R   G +    ++PK++C   VPL S   S  RFQ
Sbjct: 175 RRDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPL-STSSSDERFQ 228

[Close]

BLAST of Lcy06g019450 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 78.2 bits (191), Expect = 8.0e-15
Identity = 40/140 (28.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 33  THKVKFHVIDADLTRFNFTDDSRLLFDLGVNMTVKNPNRAFGVFFDSIDVAVLYQDIKFS 92
           ++ VKF V DA+LT F+   ++ L + L +N++++N   + G+ +D  +  V Y + +  
Sbjct: 4   SNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRLG 63

Query: 93  NMSLSPFYQGQDGSRLLKMKFDGQQLMNLDAQQLAVFALEKLVDVFTLKLELRLQMRVNI 152
            + +  FY G   + LL+  F+GQ L+ L   +   F  ++   V+ + ++L +  RV +
Sbjct: 64  AVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVMV 123

Query: 153 -GLIKIKLKPKVRCGFDVPL 172
             L+   +KP VRC   +PL
Sbjct: 124 LHLVTWPMKPVVRCHLKIPL 143

The following BLAST results are available for this feature:

BLAST of Lcy06g019450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNH6	6.0e-23	35.14	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	1.9e-21	35.00	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN1	8.1e-20	33.33	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	1.1e-13	28.57	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q8LD98	4.2e-08	26.54	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]

BLAST of Lcy06g019450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1R7	3.1e-75	78.95	NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111459233 PE=4 SV=1	[more]
A0A6J1KYH7	2.0e-74	77.37	NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1	[more]
A0A5D3DNY5	5.4e-67	71.58	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TKH6	2.8e-60	73.29	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3B7X9	8.3e-60	73.58	NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1	[more]

BLAST of Lcy06g019450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957840.1	6.5e-75	78.95	NDR1/HIN1-like protein 3 [Cucurbita moschata]	[more]
XP_023005830.1	4.2e-74	77.37	NDR1/HIN1-like protein 3 [Cucurbita maxima]	[more]
KAG7028146.1	2.2e-70	76.32	NDR1/HIN1-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038904446.1	2.8e-70	74.21	NDR1/HIN1-like protein 10 [Benincasa hispida]	[more]
KAG6596607.1	2.2e-67	82.39	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy06g019450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06320.1	4.2e-24	35.14	NDR1/HIN1-like 3	[more]
AT2G35980.1	1.4e-22	35.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11650.1	5.7e-21	33.33	NDR1/HIN1-like 2	[more]
AT2G35460.1	2.0e-18	32.02	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G32270.1	8.0e-15	28.57	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 64..165 e-value: 4.9E-11 score: 43.1
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 8..186
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 8..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g019450.1	Lcy06g019450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane