Lcy06g017470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g017470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ulp1-like peptidase
Location	Chr06: 40203983 .. 40204480 (+)
RNA-Seq Expression	Lcy06g017470
Synteny	Lcy06g017470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGGGCAAAGTTGAATCCTACAAGAGGAAGAGAGACGGGTCAAAGAAGCAAGAAACATATAGTCTATATGGTTTTTGGCATGCCTTCCAGGTAATCATATTTTAAAGTAATGGCATATTGTAATGTATGGATTGTTTCATAATTTCTTGCGAATTTTGAATGCAGGTATGGGCATACGAGACTGTGTCCTCAGTGATAGGGCGTGTTGCAAATCGTGTGAACGAGAATGCCATACCACGCATCCTTAAATGGACATGCTCCCACTCGCCTACGTACTCCCGCATAAGCACTGAGGTGATTGGGTCGAGGGTGGTGAGTTTCATTTGCCACTTGTTTTTTACTCATCTATTTCGATACCTAAGATTAAGTTCATATGTATCAGGCGAGGATCACAAAGTTTCTTCAATCAACAGAGGAGGAGCGTCGATATATGAATCGGATAATGGAACCCCCACATCCACCAACGCCTTCTCCACCCCCTCCAGCAGTTGA

mRNA sequence

ATGTTGAAGGGCAAAGTTGAATCCTACAAGAGGAAGAGAGACGGGTCAAAGAAGCAAGAAACATATAGTCTATATGGTTTTTGGCATGCCTTCCAGGTATGGGCATACGAGACTGTGTCCTCAGTGATAGGGCGTGTTGCAAATCGTGTGAACGAGAATGCCATACCACGCATCCTTAAATGGACATGCTCCCACTCGCCTACGTACTCCCGCATAAGCACTGAGGTGATTGGGTCGAGGGTGGTGAGTTTCATTTGCCACTTGTTTTTTACTCATCTATTTCGATACCTAAGATTAAGTTCATATGTATCAGGCGAGGATCACAAAGTTTCTTCAATCAACAGAGGAGGAGCGTCGATATATGAATCGGATAATGGAACCCCCACATCCACCAACGCCTTCTCCACCCCCTCCAGCAGTTGA

Coding sequence (CDS)

ATGTTGAAGGGCAAAGTTGAATCCTACAAGAGGAAGAGAGACGGGTCAAAGAAGCAAGAAACATATAGTCTATATGGTTTTTGGCATGCCTTCCAGGTATGGGCATACGAGACTGTGTCCTCAGTGATAGGGCGTGTTGCAAATCGTGTGAACGAGAATGCCATACCACGCATCCTTAAATGGACATGCTCCCACTCGCCTACGTACTCCCGCATAAGCACTGAGGTGATTGGGTCGAGGGTGGTGAGTTTCATTTGCCACTTGTTTTTTACTCATCTATTTCGATACCTAAGATTAAGTTCATATGTATCAGGCGAGGATCACAAAGTTTCTTCAATCAACAGAGGAGGAGCGTCGATATATGAATCGGATAATGGAACCCCCACATCCACCAACGCCTTCTCCACCCCCTCCAGCAGTTGA

Protein sequence

MLKGKVESYKRKRDGSKKQETYSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILKWTCSHSPTYSRISTEVIGSRVVSFICHLFFTHLFRYLRLSSYVSGEDHKVSSINRGGASIYESDNGTPTSTNAFSTPSSS

Homology

[Close]

BLAST of Lcy06g017470 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.6e-14
Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 2   LKGKVESYKRK-RDGSKKQETYSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           LK KVE+YK+K    S   ETYSLYGF +AFQVWAYET+S++  RVA R+N++AIPR+L+
Sbjct: 45  LKDKVEAYKQKVAIDSSHVETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLR 104

Query: 62  WTCSHSPTYSRISTEV---IGSRVV 83
           W+C++S  ++ +  EV   + S+VV
Sbjct: 105 WSCTYSRAFNVLEREVFENVKSKVV 129

[Close]

BLAST of Lcy06g017470 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.3e-13
Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 2   LKGKVESYKRK-RDGSKKQETYSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           LK KVE YK+K    S   ETYSLY F +AFQVWAYET+S++  RVA R+N++AIPR+L+
Sbjct: 204 LKDKVEXYKQKVAMDSSHVETYSLYXFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLR 263

Query: 62  WTCSHSPTYSRISTEV---IGSRVV 83
           W+C++S  ++ +  EV   + S+VV
Sbjct: 264 WSCTYSRAFNVLEREVFENVKSKVV 288

[Close]

BLAST of Lcy06g017470 vs. ExPASy TrEMBL
Match: A0A6J1C463 (uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008328 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 36/66 (54.55%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 20 ETYSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILKWTCSHSPTYSRISTEV--- 79
          ETYSLYGF +AFQVWAYET+S++  RVA R+N++AIPR+L+W+C++S  ++ +  EV   
Sbjct: 7  ETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFEN 66

Query: 80 IGSRVV 83
          + S+VV
Sbjct: 67 VKSKVV 72

[Close]

BLAST of Lcy06g017470 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.1e-11
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 2   LKGKVESYKRKRDGSKKQET-YSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           LK KV+ YK+K   +K     YSL GF HAFQVWAYE +SS+ G+   R+N  A+PRIL+
Sbjct: 209 LKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILR 268

Query: 62  WTCSHSPTYSRISTEVIGS 80
           W+CS+S     +  +V  S
Sbjct: 269 WSCSYSLPSKLLQRDVFNS 287

[Close]

BLAST of Lcy06g017470 vs. ExPASy TrEMBL
Match: A0A5D3CAE0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001120 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 2   LKGKVESYKRKRDGSKKQET-YSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           L+GK E+YK K+  S K  T Y++ G+ HAFQVW YE +S+    +A + N+  IPRIL+
Sbjct: 149 LQGKKEAYKLKKTKSSKAVTYYNIKGYVHAFQVWTYEALSTASEHLATKNNKELIPRILR 208

Query: 62  WTCSHSPTYSRISTEVIGSR 81
           W C+ +P+Y  +   +  ++
Sbjct: 209 WNCTQAPSYKMLQKNIFDNK 228

[Close]

BLAST of Lcy06g017470 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 2   LKGKVESYKRK-RDGSKKQETYSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           LK KVE+YK+K    S   ETYSLYGF +AFQVWAYET+S++  RVA R+N++AIPR+L+
Sbjct: 45  LKDKVEAYKQKVAIDSSHVETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLR 104

Query: 62  WTCSHSPTYSRISTEV---IGSRVV 83
           W+C++S  ++ +  EV   + S+VV
Sbjct: 105 WSCTYSRAFNVLEREVFENVKSKVV 129

[Close]

BLAST of Lcy06g017470 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-12
Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 2   LKGKVESYKRK-RDGSKKQETYSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           LK KVE YK+K    S   ETYSLY F +AFQVWAYET+S++  RVA R+N++AIPR+L+
Sbjct: 204 LKDKVEXYKQKVAMDSSHVETYSLYXFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLR 263

Query: 62  WTCSHSPTYSRISTEV---IGSRVV 83
           W+C++S  ++ +  EV   + S+VV
Sbjct: 264 WSCTYSRAFNVLEREVFENVKSKVV 288

[Close]

BLAST of Lcy06g017470 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 78.6 bits (192), Expect = 4.9e-11
Identity = 36/66 (54.55%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 20 ETYSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILKWTCSHSPTYSRISTEV--- 79
          ETYSLYGF +AFQVWAYET+S++  RVA R+N++AIPR+L+W+C++S  ++ +  EV   
Sbjct: 7  ETYSLYGFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFEN 66

Query: 80 IGSRVV 83
          + S+VV
Sbjct: 67 VKSKVV 72

[Close]

BLAST of Lcy06g017470 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 6.4e-11
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 2   LKGKVESYKRKRDGSKKQET-YSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           LK KV+ YK+K   +K     YSL GF HAFQVWAYE +SS+ G+   R+N  A+PRIL+
Sbjct: 209 LKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILR 268

Query: 62  WTCSHSPTYSRISTEVIGS 80
           W+CS+S     +  +V  S
Sbjct: 269 WSCSYSLPSKLLQRDVFNS 287

[Close]

BLAST of Lcy06g017470 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 6.4e-11
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 2   LKGKVESYKRKRDGSKKQET-YSLYGFWHAFQVWAYETVSSVIGRVANRVNENAIPRILK 61
           LK KV+ YK+K   +K     YSL GF HAFQVWAYE +SS+ G+   R+N  A+PRIL+
Sbjct: 292 LKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRLNNEAVPRILR 351

Query: 62  WTCSHSPTYSRISTEVIGS 80
           W+CS+S     +  +V  S
Sbjct: 352 WSCSYSLPSKLLQRDVFNS 370

The following BLAST results are available for this feature:

BLAST of Lcy06g017470 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g017470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DL40	6.6e-14	52.94	uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DRZ7	7.3e-13	51.76	uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1C463	2.4e-11	54.55	uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A0A0KM59	3.1e-11	48.10	DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=...	[more]
A0A5D3CAE0	1.3e-09	40.00	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G...	[more]

BLAST of Lcy06g017470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154965.1	1.4e-13	52.94	uncharacterized protein LOC111022110 [Momordica charantia]	[more]
XP_022157020.1	1.5e-12	51.76	uncharacterized protein LOC111023847 [Momordica charantia]	[more]
XP_022136676.1	4.9e-11	54.55	uncharacterized protein LOC111008328 [Momordica charantia]	[more]
KGN49944.1	6.4e-11	48.10	hypothetical protein Csa_000148 [Cucumis sativus]	[more]
XP_031741885.1	6.4e-11	48.10	uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]	[more]

BLAST of Lcy06g017470 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g017470.1	Lcy06g017470.1	mRNA