Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTATGGAATAAGGAGACCATTTTGACAGTCTTGAGCTCATCTAGTGGGCGCATAGACACCTTTGTTAGTTCTTGTAAGGGATGGTGGAAGTTCACTGGTTTCTACGGTAACCTCGACCAGTCCAAGCGAGACGAGTCCTGGGAGCTCTTAAATAGGATTAGTGAAAACTATAATGGTCCATGGATCATTGGTGGGGACTTCAACGAGATTATGATTAGCGATGAAAAAGAGGGAGGAAGGAACAGAAGTCAAAGTCTTATGGATAATTTTAAAGAGGCTATTGACAACTGCAATCTTATTGATCTGGGCTTCGTGGGAGATAAATTCACTTGGAGAAGAGGTAACGGTTCGGGTCCCTGGATCGGAGAAAGGCTAGATCGTTTCTTTGCCAATCATGACATGATTTTGAGATGTAAAACCATCAAAGTTTAGCACCAAGGCTTCTTCCAATCGGATCACAGAAGCATTTTGGTCGACATTCACTTTGAAGGCAAAGCCCTCAGATCGAGAAAGAAGAAGGCTATAAAATTCAAGGAAAGCTGGCTTAAGCACCCTGAAAGCTTGAACATTATAAAGCACTCTTGGAATAGTATAAGAGGCAATGATATTTATATGTTCAATAAGAAGATTAATGCTTGCTTACAAGACCTGAACAGCTGGAACAAGGGCAGATTGCAAGGGTCTTTAAATTGGCAGTTGATAGGAAGCAACAAGAAGTCAAGAGAATTGAGCAAGAGGTAGGTGGTTTTCCCGACCCGAGGCTCCTTAAAGCGGAAAAAGAATTGGATAGCCTGTTGGAGGAAGAGGAAATGTACTGGAAACTTCGATCTAGGAAATATTGGCTCCATTGGAGTGATAGAAACACCAAATGGTTCCATTATAAGGCGTCTCAGAGAAAAAGAAAGAACGAAATCAAAGGAATTATGGATGATTCAGGGAATTGGGTGGAAAATGAGGACAATATTAGCAAGATAGCCACAAGCTTTTTCAAATCTTTGTTTGAATCTTCTAATCCCGATGAAGGTAGCATTAGGGAGATCCTAAATGGATTTTCAAAAAAAGTATCAGAGAAGCAAAACAGAGAGCTAAATAAGCCTTTCTTGAAAGAGGAGATTGAAATGGCCCTCAAGAATATTAGCCCATCCAAAGCTCCGGGTCCTGAGGGAGTGCATGCTATGTTCTACCAAAAGTGTTGGGATATTGTTGGAAAAGACCCAATCGACATCTGTTCGAACATTCTTAATGAAGGGACAAGTATGGAAGGCATAAACAACACTAACATAGCTCTCATCCCTAAAATCCAAGATCTAAAGTCTATGGCTAGCTTTAGGCCCATAAGCTTATGCAACGTCATATACAAAATTGTGGCGAAAGCTATAGCTAATAGGATGAAGAATACCCTGGAGAATGTCATTTCCTAAACTCAGACAGCTTTCGTCCCTAAGAGGCTTATATCAGACAATGTTGTGTTGGGATTTGAATGTATTCACGCTCTGAACAACAAAAGGAAGGGCAAAGAAGGTCAGATTGCCATGAAGATTGATATGAGTAAGACTTACAATAGGGTTGAATGGTGTTTCATAAGGAGGATTATGGAAAAGTTGGGGTTCAGTAAGGCCTGGACAGACAAAGTGATGGCTTGCATTGAATCGGTCAAATACACGGTCTTAATTAATGGCGTTCCCTAAGAGATCTTCACCCCAAAGCGTGGGCTTCGATAGGGAGACCATCTCTCTCCTTATATCTTTATTTTATGTGTCGAAGGTCTTACCTCCTTACTTAATAAAGAGGAAGAGTTAGACCATTTTAGAGGCTTGAAAGTTAACAATCACTGTCCCTCACTTTCTCATCTATTTTTTGCAGATGACTGCCTGATTTTCTGTAGGGCGACAGAGAAAGACTGCGAGACTATCAAAAGAATCCTCAAAACTTACGAGAAGGCTACAGGTCAAACTATAAATCAAAGCAAATTCATCGTCATGGCAAGTAGGAATATAAAGGAAGACAGTGTGGCTAAGATCAGCAAGATTCTTGACATGGAAGCATCAAAAGACTTGGGATACTACTTGGGCATACCTTCTCAGAACGGGAGGAATAAGAATGTCGTATTTAGAAGGCTTAAGGACAGAGTTTGTAGGGCCTTGTAAAGTTGGAAAGAAAAGCTATTTTCATTAGGAGGCAAGGAGGTCCTTATAAAGTCTATAGCGTAGGTCATTCCCACCTACACGATGAGCTGCTTCAGGCTTCCTAACTCCATTTGTGTGGATATAAACAAAGTGCGCAAAGTTTTGGTGGGGCTCAACTAATGGCAAGAGTAAGGCGCATTGGATGAGCCGGATCAAACTTTGCTCCAGTAAAGATAGGGGAGGGTTGGGTTTTAGAGAGTTAAAGTTTTTCAACCAAGCTATGTTGGCGACGTTGAGTTGGCGTATTCTAAAAAATCCAAACTCCCTCCTTACTAGGGTCCTTAAGGGTAGGTATTTCAAGGGAGGCTTCTTCCTTGAAGCTCCTCTTGGAACAAACCCTTCGCTCACTTGGAGGAGTATTATTTGGGGCCGGGAGCTTTTCCAAAAGGGTTATAGATGGAAGATCGACAATGGAAAGCACGTTAGAATTGATAAAGACCCTTGGATAGCTAGGAAAGGGTCATGTGTGCCACTATGGGCTGAGGAGTCCATAAAAGGGAAGTACATCTCTTCCATTCTCAAAGGCAATGGCAATTGGAGGAATGCCTTAGTTCATGTGTGCTTCAGGCCATCAAATCAGGAAGATATCAAGAATACAATGGCATGGGGTGCAAATTTCAAAGATGACATAATTTGGAACTATGATCCAAAATACATCTTTACTGTCAAAAGCGCATACCACCAAGCCACTTCAATCCATATTAATATAAAAGCCTCCCCTTCTAATGTGGAAGATCCGATCCTGTTGTGGAAGAGGTTTTGAAAGATCAAAACTATTCCAAAGGCGAAGATTTGTGCTTGGAGAATTATTCATGATTCAATCCCAACAAAATCAAATATTAGGAAAAAAGAAATTGAGACTAACACTTTGTGCCTTTTTTGCAGGAAATTCGAGGAGTCATCCATTCACACTCTATGGAACTATAAGTTGGCAAAAAAAAATCTGGAAACACTTCATTCCCCTGACAAACGTTCTCTTTGGTTTGGACAGGAATTCATGGAAAGCTATTGA
mRNA sequence
ATGTTATGGAATAAGGAGACCATTTTGACAGTCTTGAGCTCATCTAGTGGGCGCATAGACACCTTTGTTAGTTCTTGTAAGGGATGGTGGAAGTTCACTGGTTTCTACGGTAACCTCGACCAGTCCAAGCGAGACGAGTCCTGGGAGCTCTTAAATAGGATTAGTGAAAACTATAATGGTCCATGGATCATTGGTGGGGACTTCAACGAGATTATGATTAGCGATGAAAAAGAGGGAGGAAGGAACAGAAGTCAAAGTCTTATGGATAATTTTAAAGAGGCTATTGACAACTGCAATCTTATTGATCTGGGCTTCGTGGGAGATAAATTCACTTGGAGAAGAGTTGATAGGAAGCAACAAGAAGTCAAGAGAATTGAGCAAGAGGTAGGTGGTTTTCCCGACCCGAGGCTCCTTAAAGCGGAAAAAGAATTGGATAGCCTGTTGGAGGAAGAGGAAATGTACTGGAAACTTCGATCTAGGAAATATTGGCTCCATTGGAGTGATAGAAACACCAAATGGTTCCATTATAAGGCGTCTCAGAGAAAAAGAAAGAACGAAATCAAAGGAATTATGGATGATTCAGGGAATTGGGTGGAAAATGAGGACAATATTAGCAAGATAGCCACAAGCTTTTTCAAATCTTTGTTTGAATCTTCTAATCCCGATGAAGGTAGCATTAGGGAGATCCTAAATGGATTTTCAAAAAAAGTATCAGAGAAGCAAAACAGAGAGCTAAATAAGCCTTTCTTGAAAGAGGAGATTGAAATGGCCCTCAAGAATATTAGCCCATCCAAAGCTCCGGGTCCTGAGGGAGTGCATGCTATGTTCTACCAAAAGTGTTGGGATATTGTTGGAAAAGACCCAATCGACATCTGTTCGAACATTCTTAATGAAGGGACAACTTTCGTCCCTAAGAGGCTTATATCAGACAATGTTGTGTTGGGATTTGAATGTATTCACGCTCTGAACAACAAAAGGAAGGGCAAAGAAGGTCAGATTGCCATGAAGATTGATATGAGTAAGACTTACAATAGGGTTGAATGGTGTTTCATAAGGAGGATTATGGAAAAGTTGGGGTTCAATGACTGCCTGATTTTCTGTAGGGCGACAGAGAAAGACTGCGAGACTATCAAAAGAATCCTCAAAACTTACGAGAAGGCTACAGGTCAAACTATAAATCAAAGCAAATTCATCGTCATGGCAAGTAGGAATATAAAGGAAGACAGTGTGGCTAAGATCAGCAAGATTCTTGACATGGAAGCATCAAAAGACTTGGGATACTACTTGGGCATACCTTCTCAGAACGGGAGGAATAAGAATGTCGGTAGGTATTTCAAGGGAGGCTTCTTCCTTGAAGCTCCTCTTGGAACAAACCCTTCGCTCACTTGGAGGAGTATTATTTGGGGCCGGGAGCTTTTCCAAAAGGGTTATAGATGGAAGATCGACAATGGAAAGCACGTTAGAATTGATAAAGACCCTTGGATAGCTAGGAAAGGGTCATGTGTGCCACTATGGGCTGAGGAGTCCATAAAAGGGAAGTACATCTCTTCCATTCTCAAAGGCAATGGCAATTGGAGGAATGCCTTAGTTCATGTGTGCTTCAGGCCATCAAATCAGGAAGATATCAAGAATACAATGGCATGGGGTGCAAATTTCAAAGATGACATAATTTGGAACTATGATCCAAAATACATCTTTACTGTCAAAAGCGCATACCACCAAGCCACTTCAATCCATATTAATATAAAAGCCTCCCCTTCTAATGTGGAAGATCCGATCCTGTTGTGGAAGAGGAAATTCGAGGAGTCATCCATTCACACTCTATGGAACTATAAGTTGGCAAAAAAAAATCTGGAAACACTTCATTCCCCTGACAAACGTTCTCTTTGGTTTGGACAGGAATTCATGGAAAGCTATTGA
Coding sequence (CDS)
ATGTTATGGAATAAGGAGACCATTTTGACAGTCTTGAGCTCATCTAGTGGGCGCATAGACACCTTTGTTAGTTCTTGTAAGGGATGGTGGAAGTTCACTGGTTTCTACGGTAACCTCGACCAGTCCAAGCGAGACGAGTCCTGGGAGCTCTTAAATAGGATTAGTGAAAACTATAATGGTCCATGGATCATTGGTGGGGACTTCAACGAGATTATGATTAGCGATGAAAAAGAGGGAGGAAGGAACAGAAGTCAAAGTCTTATGGATAATTTTAAAGAGGCTATTGACAACTGCAATCTTATTGATCTGGGCTTCGTGGGAGATAAATTCACTTGGAGAAGAGTTGATAGGAAGCAACAAGAAGTCAAGAGAATTGAGCAAGAGGTAGGTGGTTTTCCCGACCCGAGGCTCCTTAAAGCGGAAAAAGAATTGGATAGCCTGTTGGAGGAAGAGGAAATGTACTGGAAACTTCGATCTAGGAAATATTGGCTCCATTGGAGTGATAGAAACACCAAATGGTTCCATTATAAGGCGTCTCAGAGAAAAAGAAAGAACGAAATCAAAGGAATTATGGATGATTCAGGGAATTGGGTGGAAAATGAGGACAATATTAGCAAGATAGCCACAAGCTTTTTCAAATCTTTGTTTGAATCTTCTAATCCCGATGAAGGTAGCATTAGGGAGATCCTAAATGGATTTTCAAAAAAAGTATCAGAGAAGCAAAACAGAGAGCTAAATAAGCCTTTCTTGAAAGAGGAGATTGAAATGGCCCTCAAGAATATTAGCCCATCCAAAGCTCCGGGTCCTGAGGGAGTGCATGCTATGTTCTACCAAAAGTGTTGGGATATTGTTGGAAAAGACCCAATCGACATCTGTTCGAACATTCTTAATGAAGGGACAACTTTCGTCCCTAAGAGGCTTATATCAGACAATGTTGTGTTGGGATTTGAATGTATTCACGCTCTGAACAACAAAAGGAAGGGCAAAGAAGGTCAGATTGCCATGAAGATTGATATGAGTAAGACTTACAATAGGGTTGAATGGTGTTTCATAAGGAGGATTATGGAAAAGTTGGGGTTCAATGACTGCCTGATTTTCTGTAGGGCGACAGAGAAAGACTGCGAGACTATCAAAAGAATCCTCAAAACTTACGAGAAGGCTACAGGTCAAACTATAAATCAAAGCAAATTCATCGTCATGGCAAGTAGGAATATAAAGGAAGACAGTGTGGCTAAGATCAGCAAGATTCTTGACATGGAAGCATCAAAAGACTTGGGATACTACTTGGGCATACCTTCTCAGAACGGGAGGAATAAGAATGTCGGTAGGTATTTCAAGGGAGGCTTCTTCCTTGAAGCTCCTCTTGGAACAAACCCTTCGCTCACTTGGAGGAGTATTATTTGGGGCCGGGAGCTTTTCCAAAAGGGTTATAGATGGAAGATCGACAATGGAAAGCACGTTAGAATTGATAAAGACCCTTGGATAGCTAGGAAAGGGTCATGTGTGCCACTATGGGCTGAGGAGTCCATAAAAGGGAAGTACATCTCTTCCATTCTCAAAGGCAATGGCAATTGGAGGAATGCCTTAGTTCATGTGTGCTTCAGGCCATCAAATCAGGAAGATATCAAGAATACAATGGCATGGGGTGCAAATTTCAAAGATGACATAATTTGGAACTATGATCCAAAATACATCTTTACTGTCAAAAGCGCATACCACCAAGCCACTTCAATCCATATTAATATAAAAGCCTCCCCTTCTAATGTGGAAGATCCGATCCTGTTGTGGAAGAGGAAATTCGAGGAGTCATCCATTCACACTCTATGGAACTATAAGTTGGCAAAAAAAAATCTGGAAACACTTCATTCCCCTGACAAACGTTCTCTTTGGTTTGGACAGGAATTCATGGAAAGCTATTGA
Protein sequence
MLWNKETILTVLSSSSGRIDTFVSSCKGWWKFTGFYGNLDQSKRDESWELLNRISENYNGPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTWRRVDRKQQEVKRIEQEVGGFPDPRLLKAEKELDSLLEEEEMYWKLRSRKYWLHWSDRNTKWFHYKASQRKRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSIREILNGFSKKVSEKQNRELNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNILNEGTTFVPKRLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLGFNDCLIFCRATEKDCETIKRILKTYEKATGQTINQSKFIVMASRNIKEDSVAKISKILDMEASKDLGYYLGIPSQNGRNKNVGRYFKGGFFLEAPLGTNPSLTWRSIIWGRELFQKGYRWKIDNGKHVRIDKDPWIARKGSCVPLWAEESIKGKYISSILKGNGNWRNALVHVCFRPSNQEDIKNTMAWGANFKDDIIWNYDPKYIFTVKSAYHQATSIHINIKASPSNVEDPILLWKRKFEESSIHTLWNYKLAKKNLETLHSPDKRSLWFGQEFMESY
Homology
BLAST of Lcy06g017290 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 56.6 bits (135), Expect = 1.2e-06
Identity = 60/275 (21.82%), Postives = 119/275 (43.27%), Query Frame = 0
Query: 46 ESWELLNRISENYNGPWIIGGDFNEIMISDEKEGGRNRS-QSLMDNFKEAIDNCNLIDLG 105
++W+L N + ++ W+I EI E+ ++ + Q+L D K A+ I L
Sbjct: 247 KTWKLNNLMLKD---TWVIDEIKKEITKFLEQNNNQDTNYQNLWDTAK-AVLRGKFIALQ 306
Query: 106 FVGDKFTWRRVDRKQQEVKRIEQEVGGFPDP----RLLKAEKELDSLLEEEEMYWKLRSR 165
K V+ +K++E+E P P + K EL+ + + + +S+
Sbjct: 307 AFLKKTEREEVNNLMGHLKQLEKEEHSNPKPSRRKEITKIRAELNEIENKRIIQQINKSK 366
Query: 166 KYWLHWSDRNTKWFHYKASQRKRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSN 225
++ ++ K +++ K+ I I + + + I KI ++K L+
Sbjct: 367 SWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKY 426
Query: 226 PDEGSIREILNG-FSKKVSEKQNRELNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQK 285
+ I + L ++S+K+ LN+P EI ++N+ K+PGP+G + FYQ
Sbjct: 427 ENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQT 486
Query: 286 CWDIVGKDPIDICSNILNEGTTFVPKRLISDNVVL 315
+ + +++ NI EG +P N+ L
Sbjct: 487 FKEELVPILLNLFQNIEKEG--ILPNTFYEANITL 515
BLAST of Lcy06g017290 vs. ExPASy TrEMBL
Match:
A0A803P8W5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 332.0 bits (850), Expect = 5.4e-87
Identity = 228/797 (28.61%), Postives = 355/797 (44.54%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFVSSCKGW-WKFTGFYGNLDQSKRDESWELLNRISENYN 60
+LW + +T+ S S D +VS +G + FTGFYG+ + +R +W LL + N N
Sbjct: 538 LLWKDDIDVTLNSFSMNHFDVYVSYDRGTRFHFTGFYGSPESHQRTLTWNLLKSFAPNSN 597
Query: 61 G-PWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTW------ 120
P +I GDFNE++ +D+KEGG R +SLM+ F+ +D CNL L + GDK+TW
Sbjct: 598 SEPRLIMGDFNELLSNDDKEGGPLRRESLMEEFRRTVDFCNLTPLAYSGDKYTWTNRHFS 657
Query: 121 -----RRVDR---------------------------------------KQQEVKR---- 180
R+DR K ++K+
Sbjct: 658 GVLIKERLDRGFINATWIGQLDIITAGTLTNLLQNISACSSALQHWHNGKYGQMKKDINT 717
Query: 181 -------IEQEVGGFPD--PRLLKAEKELDSLLEEEEMYWKLRSRKYWLHWSDRNTKWFH 240
+ + PD ++L AEK LD LLE+EE+YW R+R W+ D NTK+FH
Sbjct: 718 AQFRAASLHNSMDNSPDHTAQVLDAEKILDDLLEKEELYWHQRARVDWIKSGDSNTKFFH 777
Query: 241 YKASQRKRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSIREILNGFSK 300
+A R + N+I+ ++ G + +E + + A S+F +LF +S+ D ++ + +
Sbjct: 778 SRAKARYKNNKIQSLISSDGRVLYSETDFATEAASYFSNLFTTSSVDSEALSTTIIAINP 837
Query: 301 KVSEKQNRELNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNI 360
++E+ N L F + +++ AL +++P K+PG +G+ AMF+Q+ WD G D I
Sbjct: 838 TITEEMNTMLLAGFTRSDVDEALHSMAPDKSPGIDGMSAMFFQRHWDFDGSQVSDCVLQI 897
Query: 361 LNEG-------------------------------------------------------- 420
LN G
Sbjct: 898 LNHGADIINSALITLIPKVDQPQQIGDYRPISLCSVLYKLVSKAIVNRFKRVLPAAISQN 957
Query: 421 -TTFVPKRLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKL 480
+ F+P RLI+DNV+L FE +H L NK++G++ A+K+DMSK +++VEW F++ +M K+
Sbjct: 958 QSAFLPGRLITDNVLLAFELVHRLKNKKRGRQSYAALKLDMSKAFDQVEWVFLQEVMLKM 1017
Query: 481 GF---------------------------------------------------------- 540
GF
Sbjct: 1018 GFDMNWVELIMRCVSSSSLSFNINGAVTGLSALLRMEENLGNLKGLSISRGAPSVTHLLF 1077
Query: 541 -NDCLIFCRATEKDCETIKRILKTYEKATGQTINQSKFIVMASRNIKEDSVAKISKILDM 600
+D L+FC+A + C+ I+R+L Y +A+GQ +N K ++ S N+ + A + +L M
Sbjct: 1078 ADDSLLFCQAHDSSCQAIRRVLDVYHRASGQLLNTDKTVMSFSPNVNVELKASFNNVLGM 1137
Query: 601 EASKDLGYYLGIPSQNGRNKNVGRYFKGGFFLEAPLGTNPSLTWRSIIWGRELFQKGYRW 617
YLG+PS RYFK G FL A GT PSLTW+SI GR+L KG RW
Sbjct: 1138 PICDLHEKYLGLPSY------AARYFKNGDFLNASKGTLPSLTWQSICDGRDLLVKGLRW 1197
BLAST of Lcy06g017290 vs. ExPASy TrEMBL
Match:
A0A5B6V1H9 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_029353 PE=4 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 3.4e-81
Identity = 222/824 (26.94%), Postives = 362/824 (43.93%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFV--SSCKGWWKFTGFYGNLDQSKRDESWELLNRISENY 60
+ W +T+ S S ID + + W+FTGFYG+L ++ W LL R+S++
Sbjct: 36 LAWKGGIGITLRSYSKRHIDVLIKEDGIQEEWRFTGFYGSLYVRNQNHVWNLLERLSQDR 95
Query: 61 NGPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTWRRVDRK 120
+ PW + GDFNEIM S EK+GG R M+ F++ + NC L+D+G+ G FTW R +
Sbjct: 96 DYPWFVVGDFNEIMYSFEKKGGLPRDPRRMEIFRDTLANCGLMDVGYSGTWFTWERGNLP 155
Query: 121 QQEVK-RIEQEVGG------FPDPRL---------------------------------- 180
+ ++ R+++ V FP R+
Sbjct: 156 ETNIRERLDRGVANEKWLSLFPMGRIQHLPFATSDHCPLLLHTNSDNLFKCNRRFHFETW 215
Query: 181 ---------------------------------------LKAEK---------ELDSLL- 240
LK EK +L++LL
Sbjct: 216 WIMEESFAEVLQNIWESSSEPLMEKLKTLQAGLGKWAKALKREKGEIKKKLTEDLEALLM 275
Query: 241 ----------------------EEEEMYWKLRSRKYWLHWSDRNTKWFHYKASQRKRKNE 300
++++ YW+ R+R WL + DRNT +FH A+ RK+ N
Sbjct: 276 EDRDDESLAKIIDKKIYLNLEIDKDKRYWEQRARVNWLKFGDRNTAFFHKSATTRKKANF 335
Query: 301 IKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSI--REILNGFSKKVSEKQNRE 360
I ++ D G+ + +E + + A S+F++LF + EG I +L G + ++++ N E
Sbjct: 336 ITKLVSDDGSEIVDEIGLQEAAKSYFENLFAT----EGVIDPNRVLEGIDRCITQEINDE 395
Query: 361 LNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNILNEG----- 420
L PF ++E+ ALK + P KAPGP+G A+F+QK W IVGK+ ++ C ILN+G
Sbjct: 396 LQSPFTEDEVYAALKGMGPIKAPGPDGFPALFFQKFWHIVGKEVLEYCLGILNDGKGIES 455
Query: 421 ------------------------------------------------------TTFVPK 480
+ F+P
Sbjct: 456 ANMTDIVLIPKVSQPTALVNFRPISLCSVIYKLVTKTIANRLQTVIGGCIDKAQSAFIPG 515
Query: 481 RLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLGFN---- 540
RLI DNV+L +E +H KR GK+G +A+K+DMSK Y+RVEW F+ ++M K+GF+
Sbjct: 516 RLILDNVILAYELLHTFRQKRTGKKGYMAVKLDMSKAYDRVEWGFVMQVMRKMGFSVTWI 575
Query: 541 ------DCLIFCRATEKDCETIKRILKTYEKATGQTINQSKFIVMASRNIKEDSVAKISK 600
DC++F ATE+ +K IL+ Y +GQ +N +K V S N E S A +S
Sbjct: 576 ELIMKYDCILFGEATERGARILKEILQEYAHCSGQCVNFNKSTVFFSANTTETSKAMVSS 635
Query: 601 ILDMEASKDLGYYLGIPSQNGRNKN----------VGRYFKGGFFLEAPLGTNPSLTWRS 619
+L+++ S + YLG+P+ GR K R L + G + S WRS
Sbjct: 636 LLEVQISDNPEKYLGLPNMVGRRKREAFQNLVDRITARIEAWSSRLLSQGGNSHSYVWRS 695
BLAST of Lcy06g017290 vs. ExPASy TrEMBL
Match:
A0A2N9EVP1 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6735 PE=4 SV=1)
HSP 1 Score: 294.7 bits (753), Expect = 9.5e-76
Identity = 221/860 (25.70%), Postives = 342/860 (39.77%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFVSSCK-GWWKFTGFYGNLDQSKRDESWELLNRISENYN 60
+LW E + + + S ID V S + W+ TGFYG + + ESW LL +S +
Sbjct: 479 LLWQNEAEIVIQNFSQHHIDAHVESQQVKCWRLTGFYGRPEHHRHKESWALLKHLSTMDS 538
Query: 61 GPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTWR------ 120
PW+ GDFNE++ EK GG RS + F+++++ CN +DLG+ G +TW
Sbjct: 539 APWLCLGDFNELLALHEKRGGNARSLRQILEFQDSVNACNFVDLGYRGASYTWNNNRDDE 598
Query: 121 -----RVDRK----------QQEVKRI--------------------------------- 180
R+DR Q VK++
Sbjct: 599 ANIQGRLDRALATSTLLDWFPQLVKKMIRSSWNQQVDVGSPMFQLCQKLSRCRKALVDWS 658
Query: 181 ----------------------EQEVGGFPDPRLLKAEKELDSLLEEEEMYWKLRSRKYW 240
E GG +P++ + E++ LL ++E++W+ RSR+ W
Sbjct: 659 RTVFGALALQVQHKMEALESLHEDNYGGQHNPQIRALQDEINMLLHQDELHWRQRSRETW 718
Query: 241 LHWSDRNTKWFHYKASQRKRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDE 300
L DRNTK+FH +A QR+ KN IKGI+D G W E+E+ + IA +F +F SS E
Sbjct: 719 LEAGDRNTKYFHQRAKQRRDKNTIKGILDSQGIWCEDENGMGDIAVQYFNEIFSSSAGLE 778
Query: 301 GSIREILNGFSKKVSEKQNRELNKPFLKEEIEMALKNISPSKAPGPEG------------ 360
+ + + + V+ N +L PF EI+ A + PSK+P P+G
Sbjct: 779 --VEDTVWVIDRVVTTDMNCQLLSPFTAMEIQQAAFQMHPSKSPRPDGYMLRKANHSHIV 838
Query: 361 ------------------VHAMFYQKCWDIVGKDPIDICSNILNEG-TTFVPKRLISDNV 420
+ + Y+ ++ + NI++E + F+P R I+DNV
Sbjct: 839 LIPKKQNPQLISDYRPISLSNVVYKILSKVLANRLKSVLPNIISESQSAFIPGRQITDNV 898
Query: 421 VLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLGF------------ 480
+ FE IHAL ++RKGK Q+A+K+DMSK Y+RVEW F+ R+M+++GF
Sbjct: 899 AVAFELIHALRSRRKGKLSQMAIKLDMSKAYDRVEWTFLERVMQQMGFASRWIHLMMACV 958
Query: 481 ------------------------------------------------------------ 540
Sbjct: 959 RTTSYSVLMNGEPTGYIKPSRGIRQGDPLSPYLFLFCAEGLSALLRQAGRERRINGVSIC 1018
Query: 541 ------------NDCLIFCRATEKDCETIKRILKTYEKATGQTINQSKFIVMASRNIKED 600
+D L+FC A +C + +L TYE+A+GQ +N+ K + S+N +
Sbjct: 1019 RGGPKISHLLFADDSLLFCDANTAECSRLLEVLTTYERASGQVVNRDKTALFFSKNTPDH 1078
Query: 601 SVAKISKILDMEASKDLGYYLGIPS--------------QNGRNKNVG------------ 617
I ++ + + YLG+P+ Q +KN G
Sbjct: 1079 MRDSIQELWGVRGVANFERYLGLPAMTKEENKIHWLSWGQLCSHKNEGGMGFRDLHCFNL 1138
BLAST of Lcy06g017290 vs. ExPASy TrEMBL
Match:
A0A803PI64 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 292.0 bits (746), Expect = 6.2e-75
Identity = 231/943 (24.50%), Postives = 355/943 (37.65%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFVSSCKGW-WKFTGFYGNLDQSKRDESWELLNRISENYN 60
++W + + V SSS G I V+ W T FYGN D S+R SWELL I +
Sbjct: 310 LMWKEGIQIRVDSSSVGHILARVAGNNFLPWSLTCFYGNSDASQRRFSWELLRNIKREIH 369
Query: 61 GPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLI------------------ 120
GPW+ GDFNEI+ EK GGR RS M+ F+E ID+C LI
Sbjct: 370 GPWLCVGDFNEIVSLAEKVGGRVRSAGAMEEFREVIDDCRLIYFSSNKSDLTWCNGHESN 429
Query: 121 ---------------------------------------DLGFVGDK------------- 180
D+ V D+
Sbjct: 430 TVMERLDRGLCNEEWLLSFDGADIQVLDWWESDHKPLVVDMPLVNDENGEAKNTKKGRFH 489
Query: 181 ------------------------------------------FTWRRVDRK--QQEVKRI 240
+W R +K Q++K++
Sbjct: 490 FEEAWCEEDQCKEIVEKNWREWDVVISGGDYKRKTGEVGRALDSWNRKKKKVLNQKIKKL 549
Query: 241 EQ---EVGGFPDP----RLLKAEKELDSLLEEEEMYWKLRSRKYWLHWSDRNTKWFHYKA 300
+ E+ DP + K EK+L+++LE++E YW+ RSR WL W D NTK+FH KA
Sbjct: 550 KTTLIELSSSSDPGAWVEVKKIEKQLNAVLEKDEKYWRQRSRALWLKWGDLNTKFFHRKA 609
Query: 301 SQRKRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSIREILNGFSKKVS 360
S R++KN IKG+MDD G W + ++ ++F ++F SS+ E++N KV+
Sbjct: 610 SARRKKNAIKGLMDDIGVWHSEAGMVQRLVENYFWNIFCSSSMPHDVFEEVINVIPPKVT 669
Query: 361 EKQNRELNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNILNE 420
+ N L + F EEI A+K+++P+KAPG +G+ A+FY K W + +D I +C +LN
Sbjct: 670 DDMNEMLLEDFTAEEIVKAVKDMNPTKAPGCDGLPALFYHKFWSNLKQDVIGMCLKVLNH 729
Query: 421 G----------------------------------------------------------- 480
G
Sbjct: 730 GANLECLNETIIALIPKVEKPKKVEEFRPISLCNVIYKIVSKCLVARLSGVMDLVISDTQ 789
Query: 481 TTFVPKRLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLG 540
+ F+ RLI DN ++G+E +H + R G++A+K+DM+K Y+RVEW F+ +M +LG
Sbjct: 790 SAFIKDRLIHDNAIIGYESLHCMRKNRFQNGGKMALKLDMAKAYDRVEWLFLSAVMSRLG 849
Query: 541 FNDC-------------------------------------------------------- 600
F C
Sbjct: 850 FAQCWVDKIMRCVTSTSFSFLINGETKGKLIPERGLRQGDPLSPFLFLFCAEALSSLIQQ 909
Query: 601 ----------------------------LIFCRATEKDCETIKRILKTYEKATGQTINQS 617
L+F A C ++IL Y A+GQ +N
Sbjct: 910 EESAGRLRGIRFNRLGVSVSHLFFADDSLVFIDADMDSCLQFQQILTKYTAASGQIVNYH 969
BLAST of Lcy06g017290 vs. ExPASy TrEMBL
Match:
A0A803PHH5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 292.0 bits (746), Expect = 6.2e-75
Identity = 218/849 (25.68%), Postives = 344/849 (40.52%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFVSSCKG-WWKFTGFYGNLDQSKRDESWELLNRISENYN 60
+LW+++ ++LS SS ID+F+ + W+FTGFYG+ D SKR +SW LLNR++ Y
Sbjct: 494 LLWSEKINCSILSFSSFHIDSFIRKEENQGWRFTGFYGDPDPSKRGDSWTLLNRVARMYT 553
Query: 61 GPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTW------- 120
GPW+IGGDFNEI+ EK+GG + + LM+NF++A+D+C L ++ F G+ FTW
Sbjct: 554 GPWMIGGDFNEILRQKEKKGGNPKPRYLMNNFRKALDDCYLREVEFEGNMFTWCNGRQEN 613
Query: 121 ---RRVDR-----------------------------------KQQE------------- 180
R+DR +QQ+
Sbjct: 614 LIFERLDRVCGNSDWFDLFPAAKVVHLERLNSDHCPLLLTCDTQQQDAIKGVKWHSRFHF 673
Query: 181 -------------------------------------------------------VKRIE 240
+K E
Sbjct: 674 EHAWVEEDMCHELVNKTWGMGTTSTTARQLKDQLNKCGVVLNDWNKTRKKEMNRRIKEYE 733
Query: 241 QEVGGFPDP-------RLLKAEKELDSLLEEEEMYWKLRSRKYWLHWSDRNTKWFHYKAS 300
++ L + EK + L++EE +WK RSR WL DRNTK+FH KA+
Sbjct: 734 DKIAALSTQTDHKSWNHLKEIEKSYNVYLDKEEKFWKQRSRALWLKEGDRNTKFFHRKAN 793
Query: 301 QRKRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSIREILNGFSKKVSE 360
RK+KN I G++D + WV + K+A +F+ LF + ++E K+S
Sbjct: 794 SRKKKNAITGLLDHNARWVYGNKMVGKVAYLYFQQLFTAQPATIEELKEFQRIVPHKISR 853
Query: 361 KQNRELNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNIL--- 420
+ N L PF K+E+ A+++ISP KAPG +G+ +FY+K W I+G + I + L
Sbjct: 854 EINEYLVSPFTKDEVLQAMRDISPHKAPGNDGMPGLFYRKFWPIIGDEVTTIVAKCLAGR 913
Query: 421 ----------NEGTTFVPKRLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRV 480
+ F+ RLI DN ++G+E +H++ KR G ++A+K+DMSK Y+RV
Sbjct: 914 MKHSLHQAISEVQSAFIGGRLIQDNAIIGYESLHSMKLKRFGNGTKMALKLDMSKAYDRV 973
Query: 481 EWCFIRRIMEKLGF---------------------------------------------- 540
EW F+ +M LG+
Sbjct: 974 EWSFLMTMMRGLGYDERWIEKIMRCVTSVSFSVLINGERIGKFHPSRGLRQGDSLSPYLF 1033
Query: 541 --------------------------------------NDCLIFCRATEKDCETIKRILK 598
+D +F E +C+T+K+I +
Sbjct: 1034 LICSEGLCCLIQEAERAGRVTRVRFGRNDVTVSHLFFADDSFVFFEGKEAECKTMKQIFQ 1093
BLAST of Lcy06g017290 vs. NCBI nr
Match:
KAA3462911.1 (reverse transcriptase [Gossypium australe])
HSP 1 Score: 312.8 bits (800), Expect = 7.0e-81
Identity = 222/824 (26.94%), Postives = 362/824 (43.93%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFV--SSCKGWWKFTGFYGNLDQSKRDESWELLNRISENY 60
+ W +T+ S S ID + + W+FTGFYG+L ++ W LL R+S++
Sbjct: 36 LAWKGGIGITLRSYSKRHIDVLIKEDGIQEEWRFTGFYGSLYVRNQNHVWNLLERLSQDR 95
Query: 61 NGPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTWRRVDRK 120
+ PW + GDFNEIM S EK+GG R M+ F++ + NC L+D+G+ G FTW R +
Sbjct: 96 DYPWFVVGDFNEIMYSFEKKGGLPRDPRRMEIFRDTLANCGLMDVGYSGTWFTWERGNLP 155
Query: 121 QQEVK-RIEQEVGG------FPDPRL---------------------------------- 180
+ ++ R+++ V FP R+
Sbjct: 156 ETNIRERLDRGVANEKWLSLFPMGRIQHLPFATSDHCPLLLHTNSDNLFKCNRRFHFETW 215
Query: 181 ---------------------------------------LKAEK---------ELDSLL- 240
LK EK +L++LL
Sbjct: 216 WIMEESFAEVLQNIWESSSEPLMEKLKTLQAGLGKWAKALKREKGEIKKKLTEDLEALLM 275
Query: 241 ----------------------EEEEMYWKLRSRKYWLHWSDRNTKWFHYKASQRKRKNE 300
++++ YW+ R+R WL + DRNT +FH A+ RK+ N
Sbjct: 276 EDRDDESLAKIIDKKIYLNLEIDKDKRYWEQRARVNWLKFGDRNTAFFHKSATTRKKANF 335
Query: 301 IKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSI--REILNGFSKKVSEKQNRE 360
I ++ D G+ + +E + + A S+F++LF + EG I +L G + ++++ N E
Sbjct: 336 ITKLVSDDGSEIVDEIGLQEAAKSYFENLFAT----EGVIDPNRVLEGIDRCITQEINDE 395
Query: 361 LNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNILNEG----- 420
L PF ++E+ ALK + P KAPGP+G A+F+QK W IVGK+ ++ C ILN+G
Sbjct: 396 LQSPFTEDEVYAALKGMGPIKAPGPDGFPALFFQKFWHIVGKEVLEYCLGILNDGKGIES 455
Query: 421 ------------------------------------------------------TTFVPK 480
+ F+P
Sbjct: 456 ANMTDIVLIPKVSQPTALVNFRPISLCSVIYKLVTKTIANRLQTVIGGCIDKAQSAFIPG 515
Query: 481 RLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLGFN---- 540
RLI DNV+L +E +H KR GK+G +A+K+DMSK Y+RVEW F+ ++M K+GF+
Sbjct: 516 RLILDNVILAYELLHTFRQKRTGKKGYMAVKLDMSKAYDRVEWGFVMQVMRKMGFSVTWI 575
Query: 541 ------DCLIFCRATEKDCETIKRILKTYEKATGQTINQSKFIVMASRNIKEDSVAKISK 600
DC++F ATE+ +K IL+ Y +GQ +N +K V S N E S A +S
Sbjct: 576 ELIMKYDCILFGEATERGARILKEILQEYAHCSGQCVNFNKSTVFFSANTTETSKAMVSS 635
Query: 601 ILDMEASKDLGYYLGIPSQNGRNKN----------VGRYFKGGFFLEAPLGTNPSLTWRS 619
+L+++ S + YLG+P+ GR K R L + G + S WRS
Sbjct: 636 LLEVQISDNPEKYLGLPNMVGRRKREAFQNLVDRITARIEAWSSRLLSQGGNSHSYVWRS 695
BLAST of Lcy06g017290 vs. NCBI nr
Match:
XP_030940247.1 (uncharacterized protein LOC115965211 [Quercus lobata])
HSP 1 Score: 303.9 bits (777), Expect = 3.2e-78
Identity = 226/813 (27.80%), Postives = 338/813 (41.57%), Query Frame = 0
Query: 30 WKFTGFYGNLDQSKRDESWELLNRISENYNGPWIIGGDFNEIMISDEKEGGRNRSQSLMD 89
W+FTGFYGNL+ K +SW + +++N + PW+ GDFNEI+ S EK+GGR R + M
Sbjct: 215 WRFTGFYGNLETHKHHDSWAIQKNLNQNSSLPWLCAGDFNEILRSHEKKGGRARPEVQMR 274
Query: 90 NFKEAIDNCNLIDLGFVGDKFT-----------WRRVDR--KQQE---------VKRIE- 149
+F+E +D C DLGF G KFT W R+DR QE +K E
Sbjct: 275 DFREILDECGFADLGFSGQKFTWCKRLAGGVMVWERLDRAVANQEWISMFPGYSIKVAEG 334
Query: 150 QEVGGFPDPRLLKAEKELDSLLEEEEMYWKLRSRKYWLHWSDRNTKWFHYKASQRKRKNE 209
+EV +L + EL LL +EE W+ RS+ +WL D+NT++FH KASQR RKN
Sbjct: 335 EEVRSGNGDQLHVLKVELRELLIKEEKLWQQRSKLHWLKEGDQNTRYFHGKASQRYRKNC 394
Query: 210 IKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSIREILNGFSKKVSEKQNRELN 269
IK + + +G W + ED I+++ ++ LF +SNP + + E+L + VS+ N +L
Sbjct: 395 IKRLRNQNGEWFDGEDQIAQLFIDYYSELFTTSNPSQ--LAEVLENIPQVVSDSMNADLV 454
Query: 270 KPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNILNEGT------ 329
KPF+K+E+++ALK ++P KAPGP+G+ +FYQ WD +G D + + LN G+
Sbjct: 455 KPFVKQEVDVALKQMAPLKAPGPDGMPLIFYQHYWDSIGDDVSCVVLSCLNSGSIPASLN 514
Query: 330 ----TFVPK-------------------------------------------------RL 389
T +PK +
Sbjct: 515 HTHITLIPKIKNPESVSDFRPISLCNILYKLISKVLANRLKTLLPYVVSESQSAFQSDKA 574
Query: 390 ISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLGF------- 449
I+DN+++ FE +H + K+ GKEG +A+K+DMSK YNRVEW F+ +M KLGF
Sbjct: 575 ITDNILVAFETLHHMKIKKMGKEGFLAIKLDMSKAYNRVEWIFLENLMRKLGFHGRWVDL 634
Query: 450 ------------------------------------------------------------ 509
Sbjct: 635 VMATIKSVSYSFLINGFPCGFIKPTRGIHQGDPLSLYLFLLCLEGLNGLLNKAVARGDLR 694
Query: 510 -----------------NDCLIFCRATEKDCETIKRILKTYEKATGQTINQSKFIVMASR 569
+D LIFCRA D + I+ L YE+A+GQ IN SK + +
Sbjct: 695 GFSLCKNGPQISHLFFADDSLIFCRAKMGDVQAIQLALTLYERASGQRINGSKTNLFFGK 754
Query: 570 NIKEDSVAKISKILDMEASKDLGYYLGIPSQNGRNKN----------------------- 617
+ E + + L + K+ YLG+P+ GR K
Sbjct: 755 FVLESTKIDLMNYLGVSEIKEYEKYLGLPAMVGRKKKESFIYIKERIWGKLQGWKEKLLS 814
BLAST of Lcy06g017290 vs. NCBI nr
Match:
XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])
HSP 1 Score: 292.0 bits (746), Expect = 1.3e-74
Identity = 243/986 (24.65%), Postives = 375/986 (38.03%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFVS--SCKGWWKFTGFYGNLDQSKRDESWELLNRISENY 60
+LW +E L V S + ID +S SC W+ TGFYG+ + KR +SW LL ++ +
Sbjct: 27 LLWTREINLEVKSYTRFHIDAVISETSCDYKWRLTGFYGHPETHKRYDSWHLLAFLNSQF 86
Query: 61 NGPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTWR----- 120
PW+ GDFNEI+ +EK GG NRSQ MD F++ ++ C DLG+ G +TW
Sbjct: 87 QLPWLCLGDFNEILSMNEKFGGANRSQHQMDGFRDIVNYCGFHDLGYCGPDYTWSNMQEG 146
Query: 121 ------RVDR-------------------------------------------------- 180
R+DR
Sbjct: 147 ENRICLRLDRALATPDWSAKFVGMKVHHLVDSTFDHCALLVTDNSIRHRPRVKRFHFEAQ 206
Query: 181 --KQQEVKRIEQEVGGF------------------------------------PDPR--- 240
K+++ K I + GF D R
Sbjct: 207 WTKREDCKAIIEASWGFGVDLSTPEGISENLRICAVELSKWSSTIYGQIPKKIQDKRSRL 266
Query: 241 ---------------LLKAEKELDSLLEEEEMYWKLRSRKYWLHWSDRNTKWFHYKASQR 300
+ + +E+++LL++EE YW R++ +WL DRNTK+FH +AS+R
Sbjct: 267 NTLAMRELDEDLSLEINRLREEINALLDDEETYWGQRAKAHWLKEGDRNTKFFHAQASER 326
Query: 301 KRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPDEGSIREILNGFSKKVSEKQ 360
+++N I GI D+ G W +NE++I++ A S+F +++ SS+P + I E+ KV+E+
Sbjct: 327 RKQNTIVGIWDEQGRWCDNEESIAQAAISYFNNIYSSSHPSQ--IEEVTEAIPFKVTEEM 386
Query: 361 NRELNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWDIVGKDPIDICSNILNEG-- 420
N L + F KEE+ +ALK I P+KAPGP+G+ A+F+QK W IVG + D+ N+LN
Sbjct: 387 NESLIREFTKEEVAVALKQIHPNKAPGPDGMSAVFFQKYWSIVGNNVTDMVLNVLNHNLP 446
Query: 421 ---------------------------------------------------------TTF 480
+ F
Sbjct: 447 IPELNKTNISLIPKTNNPKRMTDFRPISLCNVVYKLISKILANRLKPLLPHIISENQSAF 506
Query: 481 VPKRLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLGF-- 540
RLI+DNV++ FE +H L++K GKEG +A+K+DMSK ++RVEW FI ++ME++GF
Sbjct: 507 TSDRLITDNVLVAFELMHYLDHKTAGKEGFMAIKLDMSKAFDRVEWGFIAKVMEQMGFCN 566
Query: 541 ------------------------------------------------------------ 599
Sbjct: 567 RWRDLVMQCITSVSYSILINGVAHGNIYPSRGLRQGDPLSPSLFLLCAEGLSALINQAAR 626
BLAST of Lcy06g017290 vs. NCBI nr
Match:
XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber])
HSP 1 Score: 290.4 bits (742), Expect = 3.7e-74
Identity = 230/865 (26.59%), Postives = 327/865 (37.80%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFVSS--CKGWWKFTGFYGNLDQSKRDESWELLNRISENY 60
+ W + + VL S IDT V WW TGFYG+ D S+RDESW LL RI +
Sbjct: 36 LFWKEGLSVEVLDSDQSHIDTVVKGGVSSDWWHLTGFYGSPDTSRRDESWGLLKRIRDRS 95
Query: 61 NGPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTWRRVDRK 120
PW+ GDFNEI EKEGG +R + M NF + I+ C L DLG+VG FTW
Sbjct: 96 ELPWLCIGDFNEIFYESEKEGGSSRMRRQMKNFFDTINWCGLRDLGYVGPNFTW------ 155
Query: 121 QQEVKRIEQEVGGFP-DPRLLKAEKELD--SLLEEEEMY----WKLRSRKYWLHW----- 180
+ Q GF RL +A LD ++ ++Y WKL R W
Sbjct: 156 ------LYQRADGFQIRERLDRALASLDWVGRFQDAKLYHLTCWKLGIRAILGMWDEKFQ 215
Query: 181 ----SDRNTKWFHYKASQRKRKNEIKGIMDDSGNWVENEDNISKIATSFFKSLFESSNPD 240
D+NT++FH +AS R +KN I G++D G W E E I +I S + LF S+ P
Sbjct: 216 NFKSGDQNTRYFHARASSRLKKNFITGLLDSQGVWCEEEHVIGEIVVSHYADLFCSNQPT 275
Query: 241 EGSIREILNGFSKKVSEKQNRELNKPFLKEEIEMALKNISPSKAPGPEGVHAMFYQKCWD 300
E E+LN KVS+ NR LN PF E+ ALK + P K+PGP G+ +F+Q W
Sbjct: 276 E--FFELLNAVQPKVSDDMNRRLNMPFQDLEVYSALKQMYPLKSPGPGGMPPLFFQHFWP 335
Query: 301 IVG-------------------------------KD--------PIDIC----------- 360
+G KD PI +C
Sbjct: 336 TIGNTVTKMVLDFLNFGSAPPKFNDTHVVLIPKNKDPKNISDYRPISLCNVIFKIASKVI 395
Query: 361 ---------SNILNEGTTFVPKRLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTY 420
S I + + FV RLI+DN+++ FE +H ++ K+ G++G +A+K+DMSK Y
Sbjct: 396 ANRLKKILPSIISDTQSAFVHGRLITDNILVAFEAMHHISQKKAGRKGTMALKLDMSKAY 455
Query: 421 NRVEWCFIRRIMEKLGFN------------------------------------------ 480
+RVEW + +IMEKLGFN
Sbjct: 456 DRVEWVCLEKIMEKLGFNLSWRRLIMRCVTTVSYSFRINGKVYGSVQPSRGIRQGDPLSP 515
Query: 481 ------------------------------------------DCLIFCRATEKDCETIKR 540
D LIFC+AT DCET++R
Sbjct: 516 YLFLIVAEGLSSLIRKSVEVGALEGVAVCRGGPKLSHLFFADDSLIFCKATIADCETLQR 575
Query: 541 ILKTYEKATGQTINQSKFIVMASRNIKEDSVAKISKILDMEASKDLGYYLGIPSQNGRNK 580
I + YE A+GQ +N++K + S N + +I + + K YLG+PS GRNK
Sbjct: 576 IFQVYENASGQQLNRAKTSLFFSTNTSREVQEEIRERFGAQVIKQHEKYLGLPSLVGRNK 635
BLAST of Lcy06g017290 vs. NCBI nr
Match:
XP_024033484.1 (uncharacterized protein LOC112095607 [Citrus clementina])
HSP 1 Score: 289.3 bits (739), Expect = 8.3e-74
Identity = 218/800 (27.25%), Postives = 324/800 (40.50%), Query Frame = 0
Query: 1 MLWNKETILTVLSSSSGRIDTFVSSCKG-WWKFTGFYGNLDQSKRDESWELLNRISENYN 60
MLW+ E ++ + S S+ ID V + G ++ Y + + ++ W LL R++
Sbjct: 27 MLWSSEIVVQIKSFSNHHIDAEVQTENGKLFRCNSVYDHPEVGQKKHIWTLLRRLAGLSL 86
Query: 61 GPWIIGGDFNEIMISDEKEGGRNRSQSLMDNFKEAIDNCNLIDLGFVGDKFTW------- 120
PW+ GDFNE++ EK GG R SL+ N +EA+ +CNL+D+G+ G FTW
Sbjct: 87 LPWLCFGDFNEVLHPYEKTGGNERELSLIRNDREALRDCNLVDMGYKGYPFTWNNGRYGP 146
Query: 121 ----RRVDR------KQQEVKRIEQE-------------------VGGFPD--------- 180
R+ R K+++ RI E G + D
Sbjct: 147 HYIEERLGRGRGLCWKRKKSTRIHYEDLWSPYEACKEIIKTEWSSYGSWNDANPIPLFQK 206
Query: 181 ------PRLL--------------------------------------KAEKELDSLLEE 240
RLL K E ++ +L
Sbjct: 207 VVKESMARLLLWSKEEFGEREKKLKQIMNQLERLKQSYVQYDSGEEIKKLEGQIHDILIN 266
Query: 241 EEMYWKLRSRKYWLHWSDRNTKWFHYKASQRKRKNEIKGIMDDSGNWVENEDNISKIATS 300
EE +WK RSR WL D+NTK+FHYKAS RK+KN I GI + SG+W + + +
Sbjct: 267 EEKFWKQRSRAEWLKAGDKNTKYFHYKASSRKKKNRIWGIENGSGSWTDKAEEVEYEFCE 326
Query: 301 FFKSLFESSNPDEGSIREILNGFSKKVSEKQNRELNKPFLKEEIEMALKNISPSKAPGPE 360
+F LF +S P + I L G + +VSE N +L +PF E+I AL +SP+KAPGP+
Sbjct: 327 YFAKLFTTSQPSQEEISAALEGITPRVSEAMNEQLEQPFTLEDITEALAQMSPTKAPGPD 386
Query: 361 GVHAMFYQKCWDIVGKDPIDICSNILNEGTTFVPKRLISDNVVLGFECIHALNNKRKGKE 420
G+ A FYQK W++V K I C +ILNE T P +V K +
Sbjct: 387 GLPAAFYQKHWNVVKKKVITTCLHILNEQGTMAPLNHTYIALV------------PKAER 446
Query: 421 GQIAMKIDMSKTYNRVEWCFIRRIMEKLGFNDCLIFCRATEKDCETIKRILKTYEKATGQ 480
++ + K N I L +D LIF RA+ DC +KRI +Y A+GQ
Sbjct: 447 QKLIHGLSFGKDIN---------ISHLLFADDSLIFIRASPMDCGNLKRIFDSYTTASGQ 506
Query: 481 TINQSKFIVMASRNIKEDSVAKISKILDMEASKDLGYYLGIPSQNGRNKN---------- 540
N K + S+N K + ++ I I + YLG+PS GR ++
Sbjct: 507 LFNLEKSSMFFSKNTKVEEISAIQNIFQLNVVSRHEKYLGLPSMIGRKRSSFFQDVKLKV 566
Query: 541 ------------------------------------------------------------ 600
Sbjct: 567 MEKISNWQHKFFSSGGKEVLIKAVAQAVPAYAMSVFKVPLGVCDDIQRAIANFWWGSKKE 626
Query: 601 ----------VGRYFKGGFFLEAPLGTNPSLTWRSIIWGRELFQKGYRWKIDNGKHVRID 631
+YFK FL A LG+NP WRSIIWGR++ G RW+I G V+I
Sbjct: 627 KRYSLVARVLEAKYFKKADFLNAKLGSNPRFIWRSIIWGRQVILAGSRWRIGKGDKVQIY 686
BLAST of Lcy06g017290 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 87.0 bits (214), Expect = 5.8e-17
Identity = 55/182 (30.22%), Postives = 82/182 (45.05%), Query Frame = 0
Query: 443 RYFKGGFFLEAPLGTNPSLTWRSIIWGRELFQKGYRWKIDNGKHVRIDKDPWIARKGSCV 502
RYF L APLG+ PS W+SI +E+ ++G R + NG+ + I + W+ K +
Sbjct: 91 RYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASA 150
Query: 503 PLWAEESIKGKY--ISSILK-------GNGNWRNALVHVCFRPSNQEDIKNTMAWGANFK 562
L + +Y +SSILK WR ++ + F ++ I G
Sbjct: 151 ALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRIL 210
Query: 563 DDIIWNYDPKYIFTVKSAYHQATSIHINIKASPSNVEDPIL------LWKRKFEESSIHT 610
D W+Y +TVKS Y T I IN ++SP V +P L +WK + H
Sbjct: 211 DSYTWDYTSSGDYTVKSGYWVLTQI-INKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHF 270
BLAST of Lcy06g017290 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 51.2 bits (121), Expect = 3.5e-06
Identity = 20/60 (33.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query: 301 TFVPKRLISDNVVLGFECIHALNNKRKGKEGQIAMKIDMSKTYNRVEWCFIRRIMEKLGF 360
+F+P R+ +DN+V E +H++ K KG +G + +K+D+ K Y+R+ W ++ + GF
Sbjct: 19 SFIPGRVSTDNIVFVQEAVHSMRRK-KGVKGWMLLKLDLEKAYDRIRWDYLEDTLISAGF 77
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P08548 | 1.2e-06 | 21.82 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A803P8W5 | 5.4e-87 | 28.61 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A5B6V1H9 | 3.4e-81 | 26.94 | Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_029353 PE=4 SV=1 | [more] |
A0A2N9EVP1 | 9.5e-76 | 25.70 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A803PI64 | 6.2e-75 | 24.50 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PHH5 | 6.2e-75 | 25.68 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 5.8e-17 | 30.22 | Ribonuclease H-like superfamily protein | [more] |
AT4G20520.1 | 3.5e-06 | 33.33 | RNA binding;RNA-directed DNA polymerases | [more] |