Lcy06g017160 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g017160
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr06: 39339589 .. 39341121 (+)
RNA-Seq Expression	Lcy06g017160
Synteny	Lcy06g017160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTTTTGAAGGGAGCGGGGTTGTCTTTGAATCTTGCCAAAACCTCGATTATTGGGATCAACACTCCATCGGAGGACATGACTTGGTGGGCCAACAAATTTGGGTGCAAGGTGGAGACTCTCCCAATCAAGTATCTAGGTTATCCCCTGGGTGGAAATCATCGCACTAGAACGTTTTGGGACCCCATTGTTGATAAGTATGAAGCTAAATTAGAAGGGTGGAAGAAGTTGCTGCTCTCTAAAGGGGAAAGGGTTACTTTGGCCCAATCGGTCCTTAATAGCCTCCCCATATACTACTTCTCCCTCCTTAAAGCCCCGGTGATGGTGATTAAGAAGTTAGAAAAGCTTACGCGGGACTTTATTTGGAATGGTGGTCAGTTCAAACCCGCTTGCAATCTTGTTAAATGGGATTGGACAGCTATGCCTACTTCCCATGGGGGCATTGGTGTGGGAGCCTTAGGTTTGCGTAACAATGCCCTTCTAACCAAGTGGCTTTGGAGATTTGCCCATGAGAAGGAAGGTCTTTGGAGGAGGGTCATTGGTAGTATTTATGGGGTTGATAGCCTTGGTTGGAGAACTATGGTGTTTACCCATAAAAAAGGCGGACGATTATGGCCCAATATTCAAAGGAATTATGACTGTTTTGAGAAGTTTACTAAATTTCAGGTGAGCTGTGGGAGAAGAATCAGGTTTTGGGGTGATGCTTGGTGTGATGTGCAGCCTCTTCAAGTTATTTTCCCGGATATTTATGAGATCTCCCATATGAATCTTGCTTCTGTTGCAGATTGCTGGGATGACAGCAACCAAACGTGGAATCTTGGCCTTCGAAGAGGATTGTTTGACAGTGAGCTGAGTAGTTGGGTGGCCCTCATTGGTAAGTTAGACAACATCCAGTTGGGTAAGGAGATGGACAGAATATCTTGGAAGCTGGAGGGTTCGGGGATTTTCTCTACTAAATCCTTATTCCAAGCCTCCGTTGGAAAATCTCCCAAGATCAATTTGTCCCTTGCGGGAAAGATTTGGAAGCATAAGTCCCCTAAGAAAGTGAAAATCTTCATTTGGAGTGTGGCTTATAGGAGTCTGAATACGGATGATAAAGTTCAAAGGAAGCTAAAAAATTGGGCTCTCTCCCCCTCGGGATGCAGACTATGTCTTAAAGAGAGTGAGGATATTGATCACATCCTCCTTCATTGTGAGTATGCTAGCAAGATTTGGAATTTCATCGCTGGTCTGTTGGGGATACCGTTCTGTTTGCCGAGGAGGGTGGATGATTGGCTTGAAGAAGGACTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTGTGCGTTTAGAGCTTCCATTTGGCTTTTATGGAAGGAGAGAAATGCTAGAACCTTTGGTGATAAGTCGTCTTCTTTTGATTCTTTTTGTAATTCTGTACAAAATACGACCTCTTGGTGGATTTCTTCATACAAAAAGTTCTTTTGTAACTACAGCTTGCTTATGATTATTAGTGATTGGCAAGCCCTTTTGAGATAG

mRNA sequence

ATGCTTGTTTTGAAGGGAGCGGGGTTGTCTTTGAATCTTGCCAAAACCTCGATTATTGGGATCAACACTCCATCGGAGGACATGACTTGGTGGGCCAACAAATTTGGGTGCAAGGTGGAGACTCTCCCAATCAAGTATCTAGGTTATCCCCTGGGTGGAAATCATCGCACTAGAACGTTTTGGGACCCCATTGTTGATAAGTATGAAGCTAAATTAGAAGGGTGGAAGAAGTTGCTGCTCTCTAAAGGGGAAAGGGTTACTTTGGCCCAATCGGTCCTTAATAGCCTCCCCATATACTACTTCTCCCTCCTTAAAGCCCCGGTGATGGTGATTAAGAAGTTAGAAAAGCTTACGCGGGACTTTATTTGGAATGGTGGTCAGTTCAAACCCGCTTGCAATCTTGTTAAATGGGATTGGACAGCTATGCCTACTTCCCATGGGGGCATTGGTGTGGGAGCCTTAGGTTTGCGTAACAATGCCCTTCTAACCAAGTGGCTTTGGAGATTTGCCCATGAGAAGGAAGGTCTTTGGAGGAGGGTCATTGGTAGTATTTATGGGGTTGATAGCCTTGGTTGGAGAACTATGGTGTTTACCCATAAAAAAGGCGGACGATTATGGCCCAATATTCAAAGGAATTATGACTGTTTTGAGAAGTTTACTAAATTTCAGGTGAGCTGTGGGAGAAGAATCAGGTTTTGGGGTGATGCTTGGTGTGATGTGCAGCCTCTTCAAGTTATTTTCCCGGATATTTATGAGATCTCCCATATGAATCTTGCTTCTGTTGCAGATTGCTGGGATGACAGCAACCAAACGTGGAATCTTGGCCTTCGAAGAGGATTGTTTGACAGTGAGCTGAGTAGTTGGGTGGCCCTCATTGGTAAGTTAGACAACATCCAGTTGGGTAAGGAGATGGACAGAATATCTTGGAAGCTGGAGGGTTCGGGGATTTTCTCTACTAAATCCTTATTCCAAGCCTCCGTTGGAAAATCTCCCAAGATCAATTTGTCCCTTGCGGGAAAGATTTGGAAGCATAAGTCCCCTAAGAAAGTGAAAATCTTCATTTGGAGTGTGGCTTATAGGAGTCTGAATACGGATGATAAAGTTCAAAGGAAGCTAAAAAATTGGGCTCTCTCCCCCTCGGGATGCAGACTATGTCTTAAAGAGAGTGAGGATATTGATCACATCCTCCTTCATTGTGAGTATGCTAGCAAGATTTGGAATTTCATCGCTGGTCTGTTGGGGATACCGTTCTGTTTGCCGAGGAGGGTGGATGATTGGCTTGAAGAAGGACTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTGTGCGTTTAGAGCTTCCATTTGGCTTTTATGGAAGGAGAGAAATGCTAGAACCTTTGGTGATAAGTCGTCTTCTTTTGATTCTTTTTGTAATTCTGTACAAAATACGACCTCTTGGTGGATTTCTTCATACAAAAAGTTCTTTTGTAACTACAGCTTGCTTATGATTATTAGTGATTGGCAAGCCCTTTTGAGATAG

Coding sequence (CDS)

ATGCTTGTTTTGAAGGGAGCGGGGTTGTCTTTGAATCTTGCCAAAACCTCGATTATTGGGATCAACACTCCATCGGAGGACATGACTTGGTGGGCCAACAAATTTGGGTGCAAGGTGGAGACTCTCCCAATCAAGTATCTAGGTTATCCCCTGGGTGGAAATCATCGCACTAGAACGTTTTGGGACCCCATTGTTGATAAGTATGAAGCTAAATTAGAAGGGTGGAAGAAGTTGCTGCTCTCTAAAGGGGAAAGGGTTACTTTGGCCCAATCGGTCCTTAATAGCCTCCCCATATACTACTTCTCCCTCCTTAAAGCCCCGGTGATGGTGATTAAGAAGTTAGAAAAGCTTACGCGGGACTTTATTTGGAATGGTGGTCAGTTCAAACCCGCTTGCAATCTTGTTAAATGGGATTGGACAGCTATGCCTACTTCCCATGGGGGCATTGGTGTGGGAGCCTTAGGTTTGCGTAACAATGCCCTTCTAACCAAGTGGCTTTGGAGATTTGCCCATGAGAAGGAAGGTCTTTGGAGGAGGGTCATTGGTAGTATTTATGGGGTTGATAGCCTTGGTTGGAGAACTATGGTGTTTACCCATAAAAAAGGCGGACGATTATGGCCCAATATTCAAAGGAATTATGACTGTTTTGAGAAGTTTACTAAATTTCAGGTGAGCTGTGGGAGAAGAATCAGGTTTTGGGGTGATGCTTGGTGTGATGTGCAGCCTCTTCAAGTTATTTTCCCGGATATTTATGAGATCTCCCATATGAATCTTGCTTCTGTTGCAGATTGCTGGGATGACAGCAACCAAACGTGGAATCTTGGCCTTCGAAGAGGATTGTTTGACAGTGAGCTGAGTAGTTGGGTGGCCCTCATTGGTAAGTTAGACAACATCCAGTTGGGTAAGGAGATGGACAGAATATCTTGGAAGCTGGAGGGTTCGGGGATTTTCTCTACTAAATCCTTATTCCAAGCCTCCGTTGGAAAATCTCCCAAGATCAATTTGTCCCTTGCGGGAAAGATTTGGAAGCATAAGTCCCCTAAGAAAGTGAAAATCTTCATTTGGAGTGTGGCTTATAGGAGTCTGAATACGGATGATAAAGTTCAAAGGAAGCTAAAAAATTGGGCTCTCTCCCCCTCGGGATGCAGACTATGTCTTAAAGAGAGTGAGGATATTGATCACATCCTCCTTCATTGTGAGTATGCTAGCAAGATTTGGAATTTCATCGCTGGTCTGTTGGGGATACCGTTCTGTTTGCCGAGGAGGGTGGATGATTGGCTTGAAGAAGGACTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATAGCGGGCTGTGCGTTTAGAGCTTCCATTTGGCTTTTATGGAAGGAGAGAAATGCTAGAACCTTTGGTGATAAGTCGTCTTCTTTTGATTCTTTTTGTAATTCTGTACAAAATACGACCTCTTGGTGGATTTCTTCATACAAAAAGTTCTTTTGTAACTACAGCTTGCTTATGATTATTAGTGATTGGCAAGCCCTTTTGAGATAG

Protein sequence

MLVLKGAGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVDKYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGGQFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYGVDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVIFPDIYEISHMNLASVADCWDDSNQTWNLGLRRGLFDSELSSWVALIGKLDNIQLGKEMDRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLNTDDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRVDDWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGDKSSSFDSFCNSVQNTTSWWISSYKKFFCNYSLLMIISDWQALLR

Homology

[Close]

BLAST of Lcy06g017160 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 8.8e-37
Identity = 121/447 (27.07%), Postives = 195/447 (43.62%), Query Frame = 0


Query: 64  IVDKYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIW 123
           I+++  +++ GW++  LS   R+TL ++VL+S+P++  S +  P  ++ +L++L+R F+W
Sbjct: 16  ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75

Query: 124 NGGQFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGS 183
                K   +LVKW     P   GG+GV A    N AL++K  WR   EK  LW  V+  
Sbjct: 76  GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQK 135

Query: 184 IYGVDSLGWRTMVFTHKKGGRLWPNIQRNY-DCFEKFTKFQVSCGRRIRFWGDAWCDVQP 243
            Y V  +     +         W +I     D       +    G++IRFW D W   +P
Sbjct: 136 KYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKP 195

Query: 244 LQVIF-----PDIYEISHMNLASVADCWD----DSNQTWNLGLRRGLFDSELSSWVALIG 303
           L  +       D   +   +L      WD    D   T N  L       EL + V    
Sbjct: 196 LLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRL-------ELRAVV---- 255

Query: 304 KLDNIQLGKEMDRISWKLEGSGIFSTKSLFQ-ASVGKSPKINL-SLAGKIWKHKSPKKVK 363
            LD +   +  DR+SWK    G FS +S ++  +V + P+ N+ S    +WK + P++VK
Sbjct: 256 -LDLVTGAR--DRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVK 315

Query: 364 IFIWSVAYRSLNTDDKVQRKLKNWALSPSG-CRLCLKESEDIDHILLHCEYASKIWNFIA 423
            F+W V  +++ T+++  R+     LS S  C++C    E + H+L  C     IW    
Sbjct: 316 TFLWLVGNQAVMTEEERHRR----HLSASNVCQVCKGGVESMLHVLRDCPAQLGIW---- 375

Query: 424 GLLGIPFCLPRRVDDWLEEGLQAWNLRKKAKVIAGC-------AFRASIWLLWKERNART 483
               +     RR   +  + L  W L       +GC        F   IW  WK R    
Sbjct: 376 ----VRVVPQRRQQGFFSKSLFEW-LYDNLGDRSGCEDIPWSTIFAVIIWWGWKWRCGNI 431

Query: 484 FGDKSSSFDSFCNSVQNTTSWWISSYK 491
           FG+ +   D     V+    W +  Y+
Sbjct: 436 FGENTKCRD----RVKFVKEWAVEVYR 431

[Close]

BLAST of Lcy06g017160 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-06
Identity = 40/151 (26.49%), Postives = 60/151 (39.74%), Query Frame = 0


Query: 95  SLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGGQFKPACNLVKWD-WTAMPTSHGGIGVGA 154
           +LP+Y  S  +   ++ KKL     +F W+  + K   + V W          GG+G   
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 155 LGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYGVDSLGWRTMVFTHKKGGRLWPNIQRNY 214
           LG  N ALL K  +R  H+   L  R++ S Y   S      V T  +    W +I    
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGT--RPSYAWRSIIHGR 121

Query: 215 DCFEKFTKFQVSCGRRIRFWGDAW-CDVQPL 244
           +   +     +  G   + W D W  D  PL
Sbjct: 122 ELLSRGLLRTIGDGIHTKVWLDRWIMDETPL 150

[Close]

BLAST of Lcy06g017160 vs. ExPASy TrEMBL
Match: M5X4S0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021750mg PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.1e-98
Identity = 179/464 (38.58%), Postives = 268/464 (57.76%), Query Frame = 0


Query: 7   AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
           +G+ +N AK+ I+GIN  +E +   A  +GC+V   P+ YLG PLGGN R   FW+P+++
Sbjct: 450 SGMKINKAKSCILGINFSTEVLNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVME 509

Query: 67  KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
           K E +L+ WK+  LSKG R+TL Q+VL+S+P YY SL K P+ V  K+E+L R+F+W G 
Sbjct: 510 KVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVAAKVEQLMRNFLWEGL 569

Query: 127 QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
           +    C+LV+W+        GG+G+G+L  RN AL  KWLWRF  E   LW R+I S YG
Sbjct: 570 EEGKKCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYG 629

Query: 187 VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
           +DS GW T           W  I + Y+ F +  +F V  G +IRFW D W     L+ +
Sbjct: 630 IDSNGWDTKRIDKVSCRNPWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDL 689

Query: 247 FPDIYEISHMNLASVADCWDDSN---QTWNLGLRRGLFDSELSSWVALIGKLDNIQL-GK 306
           FP +  +S     S+A C+ +++     W+   RR L ++E++  V L+  L N++L G 
Sbjct: 690 FPRLSSLSRRKNQSIA-CFANNHVLPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGS 749

Query: 307 EMDRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSL 366
             DR SW++E  G FS KS F++ +  + +        IWK K+P K++ F+W  A   +
Sbjct: 750 RPDRRSWEVEEQGSFSCKS-FRSFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANGRI 809

Query: 367 NTDDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRR 426
           NT D +QR+     LSPS C LC + +E+IDH+ LHC Y+ ++W  + G LG+ + +P+ 
Sbjct: 810 NTCDCIQRRQPKMCLSPSWCVLCKENAENIDHLFLHCSYSLRLWWKMLGALGVEWVIPKG 869

Query: 427 VDDWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGD 467
             + L   L+     K+A ++  C   A  W +W ERN R F D
Sbjct: 870 CFELLSINLRISGKGKRAGILRDCLVHAIFWNIWMERNQRIFQD 911

[Close]

BLAST of Lcy06g017160 vs. ExPASy TrEMBL
Match: A0A540M4H0 (zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_020784 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 7.1e-98
Identity = 187/463 (40.39%), Postives = 255/463 (55.08%), Query Frame = 0


Query: 8   GLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVDK 67
           GL +N AK  + GIN+  E +   A+ +GC+V   PIKYLG PLGG  R   FWDP+V+K
Sbjct: 7   GLKINKAKCYLAGINSDCEKLNRLADSWGCEVGRWPIKYLGLPLGGRPRALKFWDPVVEK 66

Query: 68  YEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGGQ 127
            E +L+ WKK  LS+G R+TL QSVL SLPIYY SL K P  VI +LEKL + F+W G +
Sbjct: 67  MEKRLQSWKKAFLSRGGRLTLIQSVLGSLPIYYMSLFKIPCGVIGRLEKLMKGFLWEGVE 126

Query: 128 FKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYGV 187
                +LVKW+        GG+GVG L  RN ALL KWLWRF  E   LW +VI S YG+
Sbjct: 127 EGKKNHLVKWEIVIKSKEEGGLGVGNLRNRNEALLAKWLWRFPKEPHSLWHKVIRSKYGL 186

Query: 188 DSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVIF 247
            + GW             W +I      F    KF+V  G R+RFW D W +  PL+  F
Sbjct: 187 QNNGWNAFPPMRGSSRSPWKDISSGSQLFLHCCKFEVGNGERVRFWEDGWLEGGPLKEQF 246

Query: 248 PDIYEISHM---NLASVADCWDDSNQTWNLGLRRGLFDSELSSWVALIGKLDNIQLGK-E 307
           P ++ +S M   N++S AD +  ++ +WN   RR L ++E+     L+ K++ ++L +  
Sbjct: 247 PRLFLLSRMHNQNISSFAD-FSTNSLSWNFDFRRNLNEAEIEEAARLLQKVEEVRLSQSR 306

Query: 308 MDRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLN 367
            D   WKLE S +F+ KS                  +IWK K P KVKI +W VA   LN
Sbjct: 307 TDNRRWKLEASRLFTCKSYRSFLSNNGIMQYFPPYSQIWKSKVPPKVKILVWLVAKGKLN 366

Query: 368 TDDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRV 427
           T D++QR+     LSP  C LC  + E ++HI LHC Y  ++W  +   +   + +P+  
Sbjct: 367 TCDQIQRRSHFICLSPHWCSLCKAKEESVNHIFLHCSYTIQLWWKLFQEVRASWVIPKGC 426

Query: 428 DDWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGD 467
            + L    QA  + +KAKV+ GC   A  W +W ERN R F D
Sbjct: 427 FELLSTKFQALGIGRKAKVLWGCLVSAVFWNIWLERNKRIFED 468

[Close]

BLAST of Lcy06g017160 vs. ExPASy TrEMBL
Match: A0A5H2XQW2 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.2e-97
Identity = 190/510 (37.25%), Postives = 278/510 (54.51%), Query Frame = 0


Query: 7   AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
           +G+ +N AK+ I+GIN   E +   A  +GC+V   P+ YLG PLGGN R   FW+P++D
Sbjct: 470 SGMKINKAKSCILGINFSIETLNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLD 529

Query: 67  KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
           K E +L+ WK+  LSKG R+TL Q+VL+S+P YY SL K P+ V  K+E+L R+F+W G 
Sbjct: 530 KVEKRLQRWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVTAKVEQLMRNFLWEGV 589

Query: 127 QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
           +    C+LV+W         GG+G+G+L  RN AL  KWLWRF  E   LW R+I S YG
Sbjct: 590 EEGKNCHLVRWVRVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYG 649

Query: 187 VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
           +DS GW T           W  I + Y  F +  +F V  G +IRFW D W     L+ +
Sbjct: 650 LDSNGWDTKQIDKVSCRNPWREISKGYISFLQCCRFSVGNGEKIRFWEDFWLKEGILKDL 709

Query: 247 FPDIYEISHMNLASVADCWDDSNQ----TWNLGLRRGLFDSELSSWVALIGKLDNIQL-G 306
           FP +Y +S      +A  W  +N      W+   RR L ++E++  V L+  L N++L G
Sbjct: 710 FPRLYSLSRRKNQCIA--WFANNHEMPLNWDFDFRRNLSEAEIAEVVLLLDILGNVRLFG 769

Query: 307 KEMDRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRS 366
              DR SW++E  G FS KS F++ +  +  +       IWK K+P K++ F+W  A   
Sbjct: 770 SRPDRRSWEIEEQGSFSCKS-FRSFLISTTSVVFPPYRSIWKAKTPPKIQFFVWLAANGR 829

Query: 367 LNTDDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPR 426
           +NT D +QR+     LSPS C  C + +E+IDH+ +HC Y+ K+W  +   LG  + +P+
Sbjct: 830 INTCDCIQRRQPKMCLSPSWCVFCKENAENIDHLFIHCSYSLKLWWRMLDALGAEWVIPK 889

Query: 427 RVDDWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTF-GDKSSSFDSFCNSVQN 486
              + L   L+     KKA ++  C   A  W +W ERN R F G      +   + ++ 
Sbjct: 890 GCFELLSINLRISGKGKKAGILRDCLIHAIFWNIWMERNRRIFQGHSGVRVEELWDRIKF 949

Query: 487 TTSWWISSYKKFFCNYSLLMIISDWQALLR 511
             S W +S    F +Y    I+ D  A+LR
Sbjct: 950 WASLW-ASVSGQFKDYHYSTIMRDMMAVLR 975

[Close]

BLAST of Lcy06g017160 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-97
Identity = 188/503 (37.38%), Postives = 267/503 (53.08%), Query Frame = 0


Query: 7    AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
            +GL +NL K++I GIN     ++  A    CK    PI YLG PLGGN +T  FWDP+++
Sbjct: 1526 SGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIE 1585

Query: 67   KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
            +   +L+GW+K  LS G R+TL QS L  +P Y+ SL K P  V  K+E++ RDF+W+G 
Sbjct: 1586 RISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV 1645

Query: 127  QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
                  +LV WD    P S GG+G G + +RN ALL KWLWR+  E   LW +VI SIYG
Sbjct: 1646 GEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYG 1705

Query: 187  VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
              S GW             W  I   Y  F KFT+F V  G RIRFW D W   QPL V 
Sbjct: 1706 SHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQ 1765

Query: 247  FPDIYEISHMNLASVADCWDDSNQ-TWNLGLRRGLFDSELSSWVALIGKLDNIQLGKEM- 306
            +P +  +     A ++     +   +WN   RR L DSE+     L+   D + +   + 
Sbjct: 1766 YPRLLRVVTDKNAPISSILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVP 1825

Query: 307  DRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLNT 366
            D+ SW L  SG+F+ KS F A    S    +     +W  + P KVK F+W VA++ +NT
Sbjct: 1826 DKRSWSLSSSGLFTVKSFFLALSQYSVSPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNT 1885

Query: 367  DDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRVD 426
            +D +Q +    ALSP  C+LC+K  E +DH+ LHC     +W+ +     + +  PR + 
Sbjct: 1886 NDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSIS 1945

Query: 427  DWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 486
            D L      +   K+  V+   A  A +W++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1946 DMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 2005

Query: 487  WISSYKKFFCNYSLLMIISDWQA 508
            W +   K F    L M+  DW A
Sbjct: 2006 W-AFCSKVFKGIPLNMLQLDWLA 2027

[Close]

BLAST of Lcy06g017160 vs. ExPASy TrEMBL
Match: A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-97
Identity = 189/503 (37.57%), Postives = 268/503 (53.28%), Query Frame = 0


Query: 7    AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
            +GL +NL K++I GIN     ++  A    CK    PI YLG PLGGN +T  FWDP+++
Sbjct: 1378 SGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIE 1437

Query: 67   KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
            +   +L+GW+K  LS G R+TL QS L  +P Y+ SL K P  V  K+E++ RDF+W+G 
Sbjct: 1438 RISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV 1497

Query: 127  QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
                  +LV WD    P S GG+G G + +RN ALL KWLWR+  E   LW +VI SIYG
Sbjct: 1498 GEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYG 1557

Query: 187  VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
              S GW             W  I   Y  F KFT+F V  G RIRFW D W   QPL V 
Sbjct: 1558 SHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQ 1617

Query: 247  FPDIYEISHMNLASVADCWDDSNQ-TWNLGLRRGLFDSELSSWVALIGKLDNIQLGKEM- 306
            +P +  +     A ++     +   +WN   RR L DSE+     L+  LD + +   + 
Sbjct: 1618 YPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLHISSSVP 1677

Query: 307  DRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLNT 366
            D+ SW L  SG+F+ KS F A    S    +     +W  + P KVK F+W VA++ +NT
Sbjct: 1678 DKRSWFLSPSGLFTVKSFFLALSQYSESPTIFPTKFVWNAQVPFKVKSFVWLVAHKKVNT 1737

Query: 367  DDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRVD 426
            +D +Q +    ALSP  C+LC+K  E +DH+ LHC     +W+ +     + +  PR + 
Sbjct: 1738 NDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSIS 1797

Query: 427  DWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 486
            D L      +   K+  V+   A  A +W++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1798 DMLSSNFNGFGFSKRGIVLWQNACIAIMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 1857

Query: 487  WISSYKKFFCNYSLLMIISDWQA 508
            W +   K F    L M+  DW A
Sbjct: 1858 W-AFCSKVFKGIPLNMLQLDWLA 1879

[Close]

BLAST of Lcy06g017160 vs. NCBI nr
Match: TQD93576.1 (hypothetical protein C1H46_020784 [Malus baccata])

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-97
Identity = 187/463 (40.39%), Postives = 255/463 (55.08%), Query Frame = 0


Query: 8   GLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVDK 67
           GL +N AK  + GIN+  E +   A+ +GC+V   PIKYLG PLGG  R   FWDP+V+K
Sbjct: 7   GLKINKAKCYLAGINSDCEKLNRLADSWGCEVGRWPIKYLGLPLGGRPRALKFWDPVVEK 66

Query: 68  YEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGGQ 127
            E +L+ WKK  LS+G R+TL QSVL SLPIYY SL K P  VI +LEKL + F+W G +
Sbjct: 67  MEKRLQSWKKAFLSRGGRLTLIQSVLGSLPIYYMSLFKIPCGVIGRLEKLMKGFLWEGVE 126

Query: 128 FKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYGV 187
                +LVKW+        GG+GVG L  RN ALL KWLWRF  E   LW +VI S YG+
Sbjct: 127 EGKKNHLVKWEIVIKSKEEGGLGVGNLRNRNEALLAKWLWRFPKEPHSLWHKVIRSKYGL 186

Query: 188 DSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVIF 247
            + GW             W +I      F    KF+V  G R+RFW D W +  PL+  F
Sbjct: 187 QNNGWNAFPPMRGSSRSPWKDISSGSQLFLHCCKFEVGNGERVRFWEDGWLEGGPLKEQF 246

Query: 248 PDIYEISHM---NLASVADCWDDSNQTWNLGLRRGLFDSELSSWVALIGKLDNIQLGK-E 307
           P ++ +S M   N++S AD +  ++ +WN   RR L ++E+     L+ K++ ++L +  
Sbjct: 247 PRLFLLSRMHNQNISSFAD-FSTNSLSWNFDFRRNLNEAEIEEAARLLQKVEEVRLSQSR 306

Query: 308 MDRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLN 367
            D   WKLE S +F+ KS                  +IWK K P KVKI +W VA   LN
Sbjct: 307 TDNRRWKLEASRLFTCKSYRSFLSNNGIMQYFPPYSQIWKSKVPPKVKILVWLVAKGKLN 366

Query: 368 TDDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRV 427
           T D++QR+     LSP  C LC  + E ++HI LHC Y  ++W  +   +   + +P+  
Sbjct: 367 TCDQIQRRSHFICLSPHWCSLCKAKEESVNHIFLHCSYTIQLWWKLFQEVRASWVIPKGC 426

Query: 428 DDWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGD 467
            + L    QA  + +KAKV+ GC   A  W +W ERN R F D
Sbjct: 427 FELLSTKFQALGIGRKAKVLWGCLVSAVFWNIWLERNKRIFED 468

[Close]

BLAST of Lcy06g017160 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 367.1 bits (941), Expect = 2.5e-97
Identity = 190/510 (37.25%), Postives = 278/510 (54.51%), Query Frame = 0


Query: 7   AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
           +G+ +N AK+ I+GIN   E +   A  +GC+V   P+ YLG PLGGN R   FW+P++D
Sbjct: 470 SGMKINKAKSCILGINFSIETLNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLD 529

Query: 67  KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
           K E +L+ WK+  LSKG R+TL Q+VL+S+P YY SL K P+ V  K+E+L R+F+W G 
Sbjct: 530 KVEKRLQRWKRACLSKGGRLTLIQAVLSSIPSYYMSLFKMPIGVTAKVEQLMRNFLWEGV 589

Query: 127 QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
           +    C+LV+W         GG+G+G+L  RN AL  KWLWRF  E   LW R+I S YG
Sbjct: 590 EEGKNCHLVRWVRVTKSKEEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYG 649

Query: 187 VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
           +DS GW T           W  I + Y  F +  +F V  G +IRFW D W     L+ +
Sbjct: 650 LDSNGWDTKQIDKVSCRNPWREISKGYISFLQCCRFSVGNGEKIRFWEDFWLKEGILKDL 709

Query: 247 FPDIYEISHMNLASVADCWDDSNQ----TWNLGLRRGLFDSELSSWVALIGKLDNIQL-G 306
           FP +Y +S      +A  W  +N      W+   RR L ++E++  V L+  L N++L G
Sbjct: 710 FPRLYSLSRRKNQCIA--WFANNHEMPLNWDFDFRRNLSEAEIAEVVLLLDILGNVRLFG 769

Query: 307 KEMDRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRS 366
              DR SW++E  G FS KS F++ +  +  +       IWK K+P K++ F+W  A   
Sbjct: 770 SRPDRRSWEIEEQGSFSCKS-FRSFLISTTSVVFPPYRSIWKAKTPPKIQFFVWLAANGR 829

Query: 367 LNTDDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPR 426
           +NT D +QR+     LSPS C  C + +E+IDH+ +HC Y+ K+W  +   LG  + +P+
Sbjct: 830 INTCDCIQRRQPKMCLSPSWCVFCKENAENIDHLFIHCSYSLKLWWRMLDALGAEWVIPK 889

Query: 427 RVDDWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTF-GDKSSSFDSFCNSVQN 486
              + L   L+     KKA ++  C   A  W +W ERN R F G      +   + ++ 
Sbjct: 890 GCFELLSINLRISGKGKKAGILRDCLIHAIFWNIWMERNRRIFQGHSGVRVEELWDRIKF 949

Query: 487 TTSWWISSYKKFFCNYSLLMIISDWQALLR 511
             S W +S    F +Y    I+ D  A+LR
Sbjct: 950 WASLW-ASVSGQFKDYHYSTIMRDMMAVLR 975

[Close]

BLAST of Lcy06g017160 vs. NCBI nr
Match: CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])

HSP 1 Score: 366.7 bits (940), Expect = 3.3e-97
Identity = 189/503 (37.57%), Postives = 268/503 (53.28%), Query Frame = 0


Query: 7    AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
            +GL +NL K++I GIN     ++  A    CK    PI YLG PLGGN +T  FWDP+++
Sbjct: 1378 SGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIE 1437

Query: 67   KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
            +   +L+GW+K  LS G R+TL QS L  +P Y+ SL K P  V  K+E++ RDF+W+G 
Sbjct: 1438 RISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV 1497

Query: 127  QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
                  +LV WD    P S GG+G G + +RN ALL KWLWR+  E   LW +VI SIYG
Sbjct: 1498 GEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYG 1557

Query: 187  VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
              S GW             W  I   Y  F KFT+F V  G RIRFW D W   QPL V 
Sbjct: 1558 SHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQ 1617

Query: 247  FPDIYEISHMNLASVADCWDDSNQ-TWNLGLRRGLFDSELSSWVALIGKLDNIQLGKEM- 306
            +P +  +     A ++     +   +WN   RR L DSE+     L+  LD + +   + 
Sbjct: 1618 YPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLHISSSVP 1677

Query: 307  DRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLNT 366
            D+ SW L  SG+F+ KS F A    S    +     +W  + P KVK F+W VA++ +NT
Sbjct: 1678 DKRSWFLSPSGLFTVKSFFLALSQYSESPTIFPTKFVWNAQVPFKVKSFVWLVAHKKVNT 1737

Query: 367  DDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRVD 426
            +D +Q +    ALSP  C+LC+K  E +DH+ LHC     +W+ +     + +  PR + 
Sbjct: 1738 NDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSIS 1797

Query: 427  DWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 486
            D L      +   K+  V+   A  A +W++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1798 DMLSSNFNGFGFSKRGIVLWQNACIAIMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 1857

Query: 487  WISSYKKFFCNYSLLMIISDWQA 508
            W +   K F    L M+  DW A
Sbjct: 1858 W-AFCSKVFKGIPLNMLQLDWLA 1879

[Close]

BLAST of Lcy06g017160 vs. NCBI nr
Match: RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 366.7 bits (940), Expect = 3.3e-97
Identity = 188/503 (37.38%), Postives = 267/503 (53.08%), Query Frame = 0


Query: 7    AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
            +GL +NL K++I GIN     ++  A    CK    PI YLG PLGGN +T  FWDP+++
Sbjct: 1526 SGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIE 1585

Query: 67   KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
            +   +L+GW+K  LS G R+TL QS L  +P Y+ SL K P  V  K+E++ RDF+W+G 
Sbjct: 1586 RISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV 1645

Query: 127  QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
                  +LV WD    P S GG+G G + +RN ALL KWLWR+  E   LW +VI SIYG
Sbjct: 1646 GEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYG 1705

Query: 187  VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
              S GW             W  I   Y  F KFT+F V  G RIRFW D W   QPL V 
Sbjct: 1706 SHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQ 1765

Query: 247  FPDIYEISHMNLASVADCWDDSNQ-TWNLGLRRGLFDSELSSWVALIGKLDNIQLGKEM- 306
            +P +  +     A ++     +   +WN   RR L DSE+     L+   D + +   + 
Sbjct: 1766 YPRLLRVVTDKNAPISSILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVP 1825

Query: 307  DRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLNT 366
            D+ SW L  SG+F+ KS F A    S    +     +W  + P KVK F+W VA++ +NT
Sbjct: 1826 DKRSWSLSSSGLFTVKSFFLALSQYSVSPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNT 1885

Query: 367  DDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRVD 426
            +D +Q +    ALSP  C+LC+K  E +DH+ LHC     +W+ +     + +  PR + 
Sbjct: 1886 NDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSIS 1945

Query: 427  DWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 486
            D L      +   K+  V+   A  A +W++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 1946 DMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 2005

Query: 487  WISSYKKFFCNYSLLMIISDWQA 508
            W +   K F    L M+  DW A
Sbjct: 2006 W-AFCSKVFKGIPLNMLQLDWLA 2027

[Close]

BLAST of Lcy06g017160 vs. NCBI nr
Match: RVW80860.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 365.2 bits (936), Expect = 9.5e-97
Identity = 188/503 (37.38%), Postives = 267/503 (53.08%), Query Frame = 0


Query: 7   AGLSLNLAKTSIIGINTPSEDMTWWANKFGCKVETLPIKYLGYPLGGNHRTRTFWDPIVD 66
           +GL +NL K++I GIN     ++  A    CK    PI YLG PLGGN +T  FWDP+++
Sbjct: 116 SGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIE 175

Query: 67  KYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYFSLLKAPVMVIKKLEKLTRDFIWNGG 126
           +   +L+GW+K  LS G R+TL QS L  +P Y+ SL K P  V  K+E++ RDF+W+G 
Sbjct: 176 RISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGV 235

Query: 127 QFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNALLTKWLWRFAHEKEGLWRRVIGSIYG 186
                 +LV WD    P S GG+G G + +RN ALL KWLWR+  E   LW +VI SIYG
Sbjct: 236 GEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQVILSIYG 295

Query: 187 VDSLGWRTMVFTHKKGGRLWPNIQRNYDCFEKFTKFQVSCGRRIRFWGDAWCDVQPLQVI 246
             S GW             W  I   Y  F KFT+F V  G RIRFW D W   QPL V 
Sbjct: 296 SHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGEQPLGVQ 355

Query: 247 FPDIYEISHMNLASVADCWDDSNQ-TWNLGLRRGLFDSELSSWVALIGKLDNIQLGKEM- 306
           +P +  +     A ++     +   +WN   RR L DSE+     L+   D + +   + 
Sbjct: 356 YPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLHISSSVP 415

Query: 307 DRISWKLEGSGIFSTKSLFQASVGKSPKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLNT 366
           D+ SW L  SG+F+ KS F A    S    +     +W  + P KVK F+W VA++ +NT
Sbjct: 416 DKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFKVKSFVWLVAHKKVNT 475

Query: 367 DDKVQRKLKNWALSPSGCRLCLKESEDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRVD 426
           +D +Q +    ALSP  C+LC+K  E +DH+ LHC     +W+ +     + +  PR + 
Sbjct: 476 NDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQSAKMDWVSPRSIS 535

Query: 427 DWLEEGLQAWNLRKKAKVIAGCAFRASIWLLWKERNARTFGDKSSSFDSFCNSVQNTTSW 486
           D L      +   K+  V+   A  A +W++W+ERNAR F DK+ + +   +S+   TS+
Sbjct: 536 DMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSEYLWDSICFLTSF 595

Query: 487 WISSYKKFFCNYSLLMIISDWQA 508
           W +   K F    L M+  DW A
Sbjct: 596 W-AFCSKVFKGIPLNMLQLDWLA 617

[Close]

BLAST of Lcy06g017160 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-24
Identity = 91/371 (24.53%), Postives = 150/371 (40.43%), Query Frame = 0


Query: 42  LPIKYLGYPLGGNHRTRTFWDPIVDKYEAKLEGWKKLLLSKGERVTLAQSVLNSLPIYYF 101
           LP++YLG PL     T + + P+V+K   ++  W    LS   R+ L  SV++SL  ++ 
Sbjct: 23  LPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWM 82

Query: 102 SLLKAPVMVIKKLEKLTRDFIWNGGQFKPACNLVKWDWTAMPTSHGGIGVGALGLRNNAL 161
           S  + P   IK+++ +   F+W+G +       V W     P   GG+G+ +L   N   
Sbjct: 83  SAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEAN--- 142

Query: 162 LTKWLWRFAHEKEGLWRRVIGSIYGVDSLG-WRTMVFTHKKGGRLWPNIQRNYDCFEKFT 221
                      K   W     SI G  +LG W            +W  I ++      F 
Sbjct: 143 -----------KGSFW-----SISGNTTLGSW------------MWKKILKHRALASGFV 202

Query: 222 KFQVSCGRRIRFWGDAWCDVQPLQVI--FPDIYEISHMNLASVADCWDDSNQTWNLGLRR 281
           K  +  G    FW D W  +  L  +       ++     ASVA+         N   RR
Sbjct: 203 KHDIHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEA------VVNHRPRR 262

Query: 282 GLFDSELSSWVALIGKLDNIQLGKEMDRISWKLEG---SGIFSTKSLFQASVGKSPKINL 341
              D+ L     +I ++ +  L    D + WK  G      F+TK  + A+  + PK+ +
Sbjct: 263 HRHDT-LLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKETWAAT--REPKLKV 322

Query: 342 SLAGKIWKHKSPKKVKIFIWSVAYRSLNTDDKVQRKLKNW-ALSPSGCRLCLKESEDIDH 401
           +    +W   +  K  +  W      L T D    ++ +W A + S C LC    E  DH
Sbjct: 323 NWYKGVWFSHATPKYSVLAWIAIKNRLTTGD----RMLSWNAGADSSCVLCHHLVETRDH 349

Query: 402 ILLHCEYASKI 406
           +   C Y++++
Sbjct: 383 LFFTCPYSAEV 349

[Close]

BLAST of Lcy06g017160 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 70.9 bits (172), Expect = 3.4e-12
Identity = 65/267 (24.34%), Postives = 107/267 (40.07%), Query Frame = 0


Query: 219 FTKFQVSCGRRIRFWGDAWCDVQPL-QVIFPDIYEISHMNLASVADCWDDSNQTWNLGLR 278
           F   +V  G   +FW D W  + PL +VI P       + + +V          W    R
Sbjct: 11  FIVCEVGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIASSR 70

Query: 279 -RGLFDSELSSWVALIGKLDNIQLGKEMDRISWKLE---GSGIFSTKSLFQASVGKSPKI 338
            R     +L +   L+ +   +   +  D   WK +    S  FS    + A   +S  +
Sbjct: 71  SRNPIIVQLKN---LLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTV 130

Query: 339 NLSLAGKIWKHKSPKKVKIFIWSVAYRSLNTDDKVQRKLKNWALS-PSGCRLCLKESEDI 398
               A  +W      K     W VA+  L+T D++Q    NW LS P+ C LC    +  
Sbjct: 131 PWHKA--VWFKNHVPKHAFICWVVAWNRLHTRDRLQ----NWGLSIPAECLLCNAHDDSR 190

Query: 399 DHILLHCEYASKIWNFIAGLLGIPFCLPRRVDDWLEEGLQAWNLRKKAKVIAGCAFRASI 458
            H+   C+++  +W F      +    P ++ D L   L + +  K   +I   AF + +
Sbjct: 191 AHLFFECQFSGVVWRFFTASTNLN--PPAQLMDCL-NWLLSPSREKNICLIIRLAFHSCV 250

Query: 459 WLLWKERNARTFGDKSSSFDSFCNSVQ 480
           + +W+ERN R     S S +S    +Q
Sbjct: 251 YAIWRERNQRLHSGVSRSTESILKDIQ 265

[Close]

BLAST of Lcy06g017160 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 66.2 bits (160), Expect = 8.5e-11
Identity = 67/271 (24.72%), Postives = 109/271 (40.22%), Query Frame = 0


Query: 218 KFTKFQVSCGRRIRFWGDAWCDVQPLQVIFPDIYEISHMNLASVADCWDDS-NQTWNLGL 277
           +F +  +  G    FW DAW D   L + F        + +   A   + S N  W L  
Sbjct: 10  EFMRCDMGNGESASFWYDAWTDFGQL-LTFLGAAGPRQLRIRQDARVVEASRNGDWFLPA 69

Query: 278 RRGLFDSELSSWVALIGKLDNIQLGKEMDRISWK-LEGSGI--FSTKSLFQASVGKSPKI 337
            R   +S+L      +  + +   G+  D   W+   GS +  FS++  ++     SP +
Sbjct: 70  ARS-DNSQLFLAALTMAPVPHESRGQ--DSFLWRNAAGSYLPSFSSRDTWEQIRVHSPTV 129

Query: 338 NLSLAGKIWKHKSPKKVKIFIWSVAYRSLNTDDKVQRKLKNWALS-PSGCRLCLKESEDI 397
               A  +W  +   +  +  W      L T D    +L+ W ++ PS   LC    E  
Sbjct: 130 --PWAKVVWFKEYIPRFSLITWMSFLERLPTRD----RLRGWGMNIPSSWVLCSNGDETH 189

Query: 398 DHILLHCEYASKIWNFIAGLL--GIPFCLPRRVDDWLEEGLQAWNLRKKAKVIAGCAFRA 457
            H+   C ++  IW F A       PF LP     W+ +      LR  +  I     ++
Sbjct: 190 AHLFFECSFSLAIWEFFASKFRPSPPFGLP-AASSWILQ----LPLRSHSTTILKLLLQS 249

Query: 458 SIWLLWKERNARTFGDKSSSFDSFCNSVQNT 482
           +++ +WKERNAR F   SSS  S   ++  T
Sbjct: 250 AVYHVWKERNARIFTSISSSASSLRLAIDRT 265

[Close]

BLAST of Lcy06g017160 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.5e-10
Identity = 45/166 (27.11%), Postives = 69/166 (41.57%), Query Frame = 0


Query: 331 PKINLSLAGKIWKHKSPKKVKIFIWSVAYRSLNTDDKVQRK-LKNWALSPSGCRLCLKES 390
           P     +  KIWK K+  K+K F+W +   +L T D ++R+ ++N       C  C +E 
Sbjct: 8   PPGKAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRN----HPQCHRCCQED 67

Query: 391 EDIDHILLHCEYASKIWNFIAGLLGIPFCLPRRVDDWLEEGLQAWNLRKKAKVIAGC--- 450
           E   H+   C YA ++W       GIP    R     +E         K   +++ C   
Sbjct: 68  ETSQHLFFDCFYAQQVWR----ASGIPHQELRTTGITME--------TKMELLLSSCLAN 127

Query: 451 ----AFRASIWL---LWKERNARTFGDKSSSFDSFCNSVQNTTSWW 486
                F  +IW+   LWK RN   F  KS S+ +     +N    W
Sbjct: 128 RQPQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEW 157

[Close]

BLAST of Lcy06g017160 vs. TAIR 10
Match: AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 63.2 bits (152), Expect = 7.2e-10
Identity = 58/252 (23.02%), Postives = 106/252 (42.06%), Query Frame = 0


Query: 217 EKFTKFQVSCGRRIRFWGDAWCDVQPLQVIFPDIYEISHMNL---ASVADCWDDSNQTWN 276
           E+F K  +  GR   FW D+W  + PL  +  D Y    + +   A V +    +   W 
Sbjct: 10  EQFVKCNLGNGRIAHFWHDSWTSLGPLIKVMGD-YGSRSLRIPLNARVVEALGVNG--WK 69

Query: 277 LGLRRGLFDSELSSWVALIGKLDNIQLGKEMDRISWKLEGSGIFSTKSLFQASVGKSPKI 336
           L L R      +   ++ I       +    D +   +   G FS+   + A   ++P++
Sbjct: 70  LPLSRSAPAQAIHDHISTITTPSPATIEDSFDWVVGGVVCQG-FSSARTWDAIRPRAPEL 129

Query: 337 NLSLAGKIWKHKSPKKVKIFIWSVAYRSLNTDDKVQRKLKNWA-LSPSGCRLCLKESEDI 396
           + + A  +W   +  K    +W      L T    +++L +W  +    C LC  E+E  
Sbjct: 130 DWAKA--VWFKGAVPKHAFNMWISQLDRLPT----RQRLASWGHIQSFDCCLCTIETESR 189

Query: 397 DHILLHCEYASKIWNFIAGLLGIPFCLPRRV-DDWLEEGLQAW---NLRKKAKVIAGCAF 456
           DH+L  CE+A+++W      L    C  +R+   W E  L +W   +      ++   + 
Sbjct: 190 DHLLFSCEFAAQVWRLAFSRL----CPRQRLFCSWAE--LLSWMRSSSSSAPSLLRKVSA 245

Query: 457 RASIWLLWKERN 461
            A I+ +W++RN
Sbjct: 250 HAIIYNIWRQRN 245

The following BLAST results are available for this feature:

BLAST of Lcy06g017160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	8.8e-37	27.07	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P93295	1.2e-06	26.49	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy06g017160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5X4S0	4.1e-98	38.58	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A540M4H0	7.1e-98	40.39	zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_020784 PE=4...	[more]
A0A5H2XQW2	1.2e-97	37.25	TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1	[more]
A0A438GDE7	1.6e-97	37.38	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A5BCI7	1.6e-97	37.57	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]

BLAST of Lcy06g017160 vs. NCBI nr


Match Name	E-value	Identity	Description
TQD93576.1	1.5e-97	40.39	hypothetical protein C1H46_020784 [Malus baccata]	[more]
BBN69274.1	2.5e-97	37.25	TatD related DNase [Prunus dulcis]	[more]
CAN65484.1	3.3e-97	37.57	hypothetical protein VITISV_029474 [Vitis vinifera]	[more]
RVW70235.1	3.3e-97	37.38	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVW80860.1	9.5e-97	37.38	putative ribonuclease H protein [Vitis vinifera]	[more]

BLAST of Lcy06g017160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	1.8e-24	24.53	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G04650.1	3.4e-12	24.34	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT5G18880.1	8.5e-11	24.72	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G25270.1	5.5e-10	27.11	Ribonuclease H-like superfamily protein	[more]
AT1G60720.1	7.2e-10	23.02	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 317..406 e-value: 1.2E-17 score: 64.4
None	No IPR available	PANTHER	PTHR33116:SF33	OS01G0885550 PROTEIN	coord: 8..429
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 8..429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g017160.1	Lcy06g017160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity