Homology
BLAST of Lcy06g016680 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 5.7e-25
Identity = 81/346 (23.41%), Postives = 152/346 (43.93%), Query Frame = 0
Query: 65 RSRREDFKGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDI 124
R ++ F + +RV + GW+ K S G+ TL K+V ++P MS LP ++ + +
Sbjct: 7 RINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRL 66
Query: 125 HKLMARF---------------W----------------------ALLAKQVWRIFTSPN 184
+L F W AL++K WR+ N
Sbjct: 67 DQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKN 126
Query: 185 QLVSKVIKGRYAYNMNILNAP---IKSNCSVFWRGF-VWARSLLSNGIRKQVGNGTTIHF 244
L + V++ +Y I ++ K + S WR + R ++S+G+ G+G I F
Sbjct: 127 SLWTLVLQKKYHVG-EIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRF 186
Query: 245 FGDPWIPKETTFKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPI 304
+ D W+ + + +P + D V D P +GWD K+ T + A+ +
Sbjct: 187 WTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVL 246
Query: 305 SSV-NEEDKWIWHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKI 364
V D+ W +S++G +SV+S Y+ M +++ ++ S ++ LW +++P ++
Sbjct: 247 DLVTGARDRLSWKFSQDGQFSVRSAYE--MLTVDEVPRPNMAS---FFNCLWKVRVPERV 306
Query: 365 KLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGC 369
K F+W ++ + T +R + S C +C+ E++ H L C
Sbjct: 307 KTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDC 346
BLAST of Lcy06g016680 vs. ExPASy Swiss-Prot
Match:
P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 1.5e-12
Identity = 42/152 (27.63%), Postives = 65/152 (42.76%), Query Frame = 0
Query: 105 AIPTFIMSCFRLPSTLCDDIHKLMARFW-------------------------------- 164
A+P + MSCFRL LC + M FW
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 165 ------ALLAKQVWRIFTSPNQLVSKVIKGRYAYNMNILNAPIKSNCSVFWRGFVWARSL 219
ALLAKQ +RI P+ L+S++++ RY + +++ + + S WR + R L
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match:
A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 323.9 bits (829), Expect = 8.7e-85
Identity = 158/403 (39.21%), Postives = 226/403 (56.08%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ++N KS M FSPN E V+ + + I+GM + YLG+P+ R + + F
Sbjct: 1180 YHRASGQLLNTDKSVMSFSPNTPEAVKLSFQQILGMPICACHESYLGLPAYSERDKSQLF 1239
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
+K+R+WK + W K FS+GGKE L+K+V QAIPT+ MSCFRL + C I +MARF
Sbjct: 1240 NNIKERIWKLMHAWSDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSAKFCKQIETMMARF 1299
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W A LAKQ WRIF +PN L+S+V+
Sbjct: 1300 WWGSSTDNKKIHWKNWKSLCTSKRDGGLGFRSFVHFNQAFLAKQAWRIFQTPNSLLSRVL 1359
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
KGRY + + + A + S+ W+G VW R LLS G+ ++G+GT ++ D WIP
Sbjct: 1360 KGRYYHQNDFMTAKVSGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEY 1419
Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
FKP++ + +VAD+IT ++ WDLE L + D++ I IP+S + D+W W
Sbjct: 1420 FKPLRF---TGSCSNLVADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRW 1479
Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
HY +G Y+VKSGY LA L N S+S SQ+AWW W L +PSK+++F W+ + L
Sbjct: 1480 HYDSSGDYTVKSGYNLACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSAL 1539
Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTICDH 378
P L+ RK+ S C +C + +E+I HAL C AK++ H
Sbjct: 1540 PVAQNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQH 1579
BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match:
A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 321.2 bits (822), Expect = 5.7e-84
Identity = 158/397 (39.80%), Postives = 220/397 (55.42%), Query Frame = 0
Query: 11 KYELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRRED 70
KY +ASGQVVN KS M F V + ++ + +MG++VV+N G+YLG+PS R++++
Sbjct: 45 KYSIASGQVVNFHKSEMCFGRTVSDPLKSQLAALMGVKVVDNYGKYLGLPSFVGRTKKQH 104
Query: 71 FKGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMAR 130
F+ +K +VW L+GWKG FFS GKE LIK++ QAIPT+ MSCFRLP + IH + AR
Sbjct: 105 FEFIKTKVWNKLKGWKGSFFSAAGKEILIKAIVQAIPTYTMSCFRLPKKTINSIHSMAAR 164
Query: 131 FW-------------------------------------ALLAKQVWRIFTSPNQLVSKV 190
FW ALLAKQ+WR PN L SKV
Sbjct: 165 FWWGSSEKDAKIHWCKWSTLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRYPNSLCSKV 224
Query: 191 IKGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKET 250
+K Y N+ +L A ++ S WR VW + ++ G R ++GNG ++ DPW+P+
Sbjct: 225 LKASYFPNVGVLEAKSGNHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVLEDPWLPRPV 284
Query: 251 TFKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 310
TFK +P+ + V D + + WD E +R D +I +P S EDK +
Sbjct: 285 TFKVYD--KPSLPEGMYVVDLMKGNGEWDEEFIRAFFNPTDAELILGMPTSEWEIEDKIL 344
Query: 311 WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 370
WHYSKNG YSV+SGY++A L ++ ++ + WW LW LKIP K+K F+WK H
Sbjct: 345 WHYSKNGEYSVRSGYRMAAALQVHDIQSNTEATERWWRLLWKLKIPPKVKHFVWKMAHSW 404
BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match:
A0A803NM27 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 159/401 (39.65%), Postives = 217/401 (54.11%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ +N KS M FSPN E + + +NI+GM + E YLG+P+ R +++ F
Sbjct: 1128 YHKASGQQLNTDKSVMSFSPNTSEASKQSFQNILGMPICECHESYLGLPAYSERDKKQLF 1187
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
+K+R+WK L W K FS+GGKE L+K+V Q+IPT+ MSCF+LP C +I LM+ F
Sbjct: 1188 NQIKERIWKLLNAWTDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCHEIESLMSNF 1247
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W ALLAKQ WR+F +P L+ +V+
Sbjct: 1248 WWGSTSDKKKIHWKQWKFLCKSKLEGGLGFRNFIHFNQALLAKQAWRLFQNPESLLFRVL 1307
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
KGRY + L+A S+ W+GF W R LL G+R QVGNG I DPWIP +
Sbjct: 1308 KGRYFSRSDFLSAATCGVSSLTWQGFCWGRELLKKGLRLQVGNGFDIACATDPWIPGNSI 1367
Query: 252 FKPIQ-VGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 311
F PI G P N VAD+ITP K W++ KL + DV I ++P+S D W+
Sbjct: 1368 FTPIYFTGAPTN----TVADYITPEKEWNVSKLNADFSSADVERILSLPLSHHAHSDYWV 1427
Query: 312 WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 371
WH + G Y VKSGY +A L ++ + +WW + W LK+P K+KLF WKA H
Sbjct: 1428 WH-ATGGQYEVKSGYHVACLLADENPVSVSSPNVSWWKSFWQLKLPPKVKLFAWKAIHNA 1487
Query: 372 LPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
LP L+KRK S C +C +E++ HA+ CK A+ +
Sbjct: 1488 LPVASELYKRKSLTSASCSLCLNAWESVGHAMFACKHARHV 1523
BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match:
A0A803Q8E0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 154/400 (38.50%), Postives = 218/400 (54.50%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ++N +KS M FSPN + +D + +GM + + RYLG+P+ R ++E F
Sbjct: 590 YHSASGQLLNTSKSVMSFSPNTSQSAKDFFHHTLGMPISDCHERYLGLPAYSERDKKEMF 649
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
VK+R+W+ L W K FS+GGKE L+K+V Q+IPT+ MSCFRLPST C + +MA F
Sbjct: 650 SDVKERIWQKLHAWNDKLFSVGGKEVLLKAVVQSIPTYAMSCFRLPSTFCSQLESMMANF 709
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W ALLAKQ WRIF PN L+S+++
Sbjct: 710 WWGSTKDGSKIHWRSWKLLCKSKFEGGMGFRSFVNFNKALLAKQAWRIFEMPNSLLSRLL 769
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
K RY N N L A + + S+ W+G W R LL G+R ++GNG T+ D WIP T
Sbjct: 770 KHRYFSNNNFLEARLGHSPSLIWQGIHWGRELLIEGLRYKIGNGFTVSAGFDRWIPGFTD 829
Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
FKP+ N D+ V+ FIT + W++ L DV+ I IP+S D+ IW
Sbjct: 830 FKPVSF---NGADSMTVSHFITDQREWNISLLNQYFQSIDVDKIVTIPLSFFPSNDRLIW 889
Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
H++ +GCY+V SG+ LA L + + + S WW T W+L +PSK+K+F W+ L
Sbjct: 890 HHTTSGCYTVNSGFHLAENLAENQQTQASSSHSTWWKTFWNLDLPSKVKIFAWRVMQNAL 949
Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
P L +RK+ S C +C +E+I HAL C A+ +
Sbjct: 950 PVATGLVRRKVIDSATCSLCNNAWESIGHALFNCTTARKV 986
BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match:
A0A803QC00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 310.5 bits (794), Expect = 1.0e-80
Identity = 156/401 (38.90%), Postives = 216/401 (53.87%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ +N KS M FSPN E + + +NI+GM + E YLG+P+ R +++ F
Sbjct: 130 YHKASGQQLNTDKSVMSFSPNTSEASKQSFRNILGMPICECHESYLGLPAYSERDKKQLF 189
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
+K+R+WK L W K FS+GGKE L+K+V Q+IPT+ MSCF+LP C +I LM+ F
Sbjct: 190 NQIKERIWKLLNAWTDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCHEIESLMSNF 249
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W ALLAKQ WR+F +P L+ +V+
Sbjct: 250 WWGSTSDKKKIHWKQWKFLCKSKLEGGLGFQNFIHFNQALLAKQAWRLFQNPESLLYRVL 309
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
KGRY ++ L+A S+ W+G W R LL GIR QVGNG I DPWIP +
Sbjct: 310 KGRYFSRIDFLSAATCGVSSLTWQGICWGRELLKKGIRLQVGNGFGIACATDPWIPGNSI 369
Query: 252 FKPI-QVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 311
P+ G P N VAD+ITP K W++ KL + DV I ++P+S D W+
Sbjct: 370 LTPVFFTGDPTN----TVADYITPEKEWNVSKLTADFSSVDVERILSLPLSHHATSDYWV 429
Query: 312 WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 371
WH + G Y VKSGY +A L +D ++ +WW + W LK+P K+K+F WKA H
Sbjct: 430 WH-ATGGQYEVKSGYHVACLLADDTFASVSSPHVSWWKSFWQLKLPPKVKIFAWKAIHNA 489
Query: 372 LPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
LP L+KRK C +C +E++ HA+ CK A+ +
Sbjct: 490 LPVASELFKRKSLTFASCSLCLNAWESVGHAMFSCKHARHV 525
BLAST of Lcy06g016680 vs. NCBI nr
Match:
XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])
HSP 1 Score: 323.9 bits (829), Expect = 1.8e-84
Identity = 158/403 (39.21%), Postives = 226/403 (56.08%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ++N KS M FSPN E V+ + + I+GM + YLG+P+ R + + F
Sbjct: 720 YHRASGQLLNTDKSVMSFSPNTPEAVKLSFQQILGMPICACHESYLGLPAYSERDKSQLF 779
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
+K+R+WK + W K FS+GGKE L+K+V QAIPT+ MSCFRL + C I +MARF
Sbjct: 780 NNIKERIWKLMHAWSDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSAKFCKQIETMMARF 839
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W A LAKQ WRIF +PN L+S+V+
Sbjct: 840 WWGSSTDNKKIHWKNWKSLCTSKRDGGLGFRSFVHFNQAFLAKQAWRIFQTPNSLLSRVL 899
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
KGRY + + + A + S+ W+G VW R LLS G+ ++G+GT ++ D WIP
Sbjct: 900 KGRYYHQNDFMTAKVSGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEY 959
Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
FKP++ + +VAD+IT ++ WDLE L + D++ I IP+S + D+W W
Sbjct: 960 FKPLRF---TGSCSNLVADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRW 1019
Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
HY +G Y+VKSGY LA L N S+S SQ+AWW W L +PSK+++F W+ + L
Sbjct: 1020 HYDSSGDYTVKSGYNLACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSAL 1079
Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTICDH 378
P L+ RK+ S C +C + +E+I HAL C AK++ H
Sbjct: 1080 PVAQNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQH 1119
BLAST of Lcy06g016680 vs. NCBI nr
Match:
XP_030496634.1 (uncharacterized protein LOC115712492 [Cannabis sativa])
HSP 1 Score: 313.9 bits (803), Expect = 1.9e-81
Identity = 153/400 (38.25%), Postives = 215/400 (53.75%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ++N TKS M FSPN + +D +GM + + RYLG+P+ R ++E F
Sbjct: 518 YHSASGQLLNTTKSVMSFSPNTSQSAKDFFHRTLGMPISDCHERYLGLPAYSERDKKEMF 577
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
VK+R+W+ L W K FS+GGKE L+K+V Q+IPT+ MSCFRLPST C + +MA F
Sbjct: 578 SDVKERIWQKLHAWNDKLFSVGGKEVLLKAVVQSIPTYAMSCFRLPSTFCSQLESMMANF 637
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W ALLAKQ WRI PN L+S+++
Sbjct: 638 WWGSTKDGSKIHWRSWKLLCKSKFEGGMGFRSFVNFNKALLAKQAWRILEMPNSLLSRLL 697
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
K RY N N L A + + S+ W+G W R LL G+R ++GNG T+ D WIP T
Sbjct: 698 KHRYFSNNNFLEARLGHSPSLTWQGIHWGRELLIEGLRYKIGNGVTVSAGFDRWIPGFTD 757
Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
FKP+ N D V+ FIT + W++ L DV+ I IP+S D+ IW
Sbjct: 758 FKPVSF---NGADTMTVSHFITDQREWNISLLNQYFQSIDVDKIVTIPLSFFQTNDRLIW 817
Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
H++ GCY+V SG+ LA L + + + S WW T W+L++PSK+K+F W+ L
Sbjct: 818 HHTTTGCYTVNSGFHLAENLAENQQTHASSSHSTWWKTFWNLELPSKVKIFAWRVMQNAL 877
Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
P L +RK+ S C +C +E++ HAL C A+ +
Sbjct: 878 PVATGLVRRKVIDSATCSLCNNAWESVGHALFNCTTARKV 914
BLAST of Lcy06g016680 vs. NCBI nr
Match:
XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa])
HSP 1 Score: 312.8 bits (800), Expect = 4.2e-81
Identity = 160/400 (40.00%), Postives = 218/400 (54.50%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQV+N K + FS N R+ + K+++GM + +YLG+PS +++++ F
Sbjct: 719 YSRASGQVINPEKCVLSFSENTRQHEQIFFKDLLGMPIQPCHEQYLGLPSFSGKNKKQLF 778
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
G+ ++WK L WK FS GGKE L+K+V QAIPT+ MSCFRLP TLC I +MARF
Sbjct: 779 GGITDKIWKLLSSWKEHLFSAGGKEVLLKAVVQAIPTYAMSCFRLPVTLCHQIESMMARF 838
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W ALLAKQ WRI PN L+S ++
Sbjct: 839 WWGSTATGKTIHWKNWNFLCKAKVQGGLGFRNFIHFNQALLAKQAWRILEFPNSLLSNLL 898
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
+ RY N N L A + SN S+ WR VW + LL G+R +VG+G I+ D W+P TT
Sbjct: 899 RHRYFSNGNYLIAGLGSNPSLTWRSLVWGKELLLKGLRWRVGSGERINCKTDSWLPGHTT 958
Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
FKP P+ N +VAD IT + WD+ L + D+N + +IP+S +D IW
Sbjct: 959 FKPYFFKGPD--PNLLVADLITEHRTWDMISLETNFNQADINRVLSIPLSPYPHDDVLIW 1018
Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
+ S G Y+VKSGY A+ L ST S + WW W LK+P K+++F+WK FH L
Sbjct: 1019 NQSFTGVYNVKSGYHFAVSLAEQDDSTCSNSIEHWWSNFWKLKLPPKVRIFVWKVFHTSL 1078
Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
P L++R + SP C IC ET+ HAL C RAK +
Sbjct: 1079 PVAAELYRRHIAFSPYCTICNSCEETVHHALFSCPRAKAV 1116
BLAST of Lcy06g016680 vs. NCBI nr
Match:
XP_030477990.1 (uncharacterized protein LOC115695032 [Cannabis sativa])
HSP 1 Score: 310.5 bits (794), Expect = 2.1e-80
Identity = 156/401 (38.90%), Postives = 216/401 (53.87%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ +N KS M FSPN E + + +NI+GM + E YLG+P+ R +++ F
Sbjct: 334 YHKASGQQLNTDKSVMSFSPNTSEASKQSFRNILGMPICECHESYLGLPAYSERDKKQLF 393
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
+K+R+WK L W K FS+GGKE L+K+V Q+IPT+ MSCF+LP C +I LM+ F
Sbjct: 394 NQIKERIWKLLNAWTDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCHEIESLMSNF 453
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W ALLAKQ WR+F +P L+ +V+
Sbjct: 454 WWGSTSDKKKIHWKQWKFLCKSKLEGGLGFQNFIHFNQALLAKQAWRLFQNPESLLYRVL 513
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
KGRY ++ L+A S+ W+G W R LL GIR QVGNG I DPWIP +
Sbjct: 514 KGRYFSRIDFLSAATCGVSSLTWQGICWGRELLKKGIRLQVGNGFGIACATDPWIPGNSI 573
Query: 252 FKPI-QVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 311
P+ G P N VAD+ITP K W++ KL + DV I ++P+S D W+
Sbjct: 574 LTPVFFTGDPTN----TVADYITPEKEWNVSKLTADFSSVDVERILSLPLSHHATSDYWV 633
Query: 312 WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 371
WH + G Y VKSGY +A L +D ++ +WW + W LK+P K+K+F WKA H
Sbjct: 634 WH-ATGGQYEVKSGYHVACLLADDTFASVSSPHVSWWKSFWQLKLPPKVKIFAWKAIHNA 693
Query: 372 LPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
LP L+KRK C +C +E++ HA+ CK A+ +
Sbjct: 694 LPVASELFKRKSLTFASCSLCLNAWESVGHAMFSCKHARHV 729
BLAST of Lcy06g016680 vs. NCBI nr
Match:
XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])
HSP 1 Score: 310.1 bits (793), Expect = 2.7e-80
Identity = 158/400 (39.50%), Postives = 226/400 (56.50%), Query Frame = 0
Query: 12 YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
Y ASGQ++N KS + FSPN R + ++++ M + +YLG+PS R + + F
Sbjct: 719 YSRASGQMLNPEKSVLSFSPNTRTTEQHFFQHLLNMPIQPCHEQYLGLPSFSGRDKSQLF 778
Query: 72 KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
G+ ++WK + W+ + FS+GGKE L+K+V QAIPT+ MSCF+LP LC+ I +LM+RF
Sbjct: 779 SGITDKIWKLMNAWREQLFSIGGKEVLLKAVVQAIPTYAMSCFQLPVKLCNQIEQLMSRF 838
Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
W ALLAKQ WRI P+ L+++V+
Sbjct: 839 WWGKSANGNAIHWKNWKFLCKSKVHGGMGFRNFVHFNQALLAKQAWRILEDPSSLIARVL 898
Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
K RY L A + S+ W+ VW + LL G+R ++G+G ++ PWIP +
Sbjct: 899 KSRYFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQPWIPGPSN 958
Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
FKP+ P ++D K VADFIT S+ WD+ KL+ T DV+ I +IP+S ED +W
Sbjct: 959 FKPLLFLSP-DRDVK-VADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLW 1018
Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
HYS G Y+VKSGYKLA + D S + + WW W LK+PSKI++F W+A+HE L
Sbjct: 1019 HYSSAGFYTVKSGYKLASDV-PDSQPNSSHTTETWWQYFWGLKLPSKIRIFAWRAYHEAL 1078
Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
PT L R + SP+C +C+ ETI+HA C RAK +
Sbjct: 1079 PTAAILQYRHISSSPQCPLCQVHLETINHAFFWCNRAKQV 1115
BLAST of Lcy06g016680 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 131.0 bits (328), Expect = 2.1e-30
Identity = 83/315 (26.35%), Postives = 134/315 (42.54%), Query Frame = 0
Query: 105 AIPTFIMSCFRLPSTLCDDIHKLMARFW-------------------------------- 164
A+PT+ M+CF LP T+C I ++A FW
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 165 -----ALLAKQVWRIFTSPNQLVSKVIKGRYAYNMNILNAPIKSNCSVFWRGFVWARSLL 224
ALL KQ+WR+ + P L++KV K RY + + LNAP+ S S W+ ++ +L
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 225 SNGIRKQVGNGTTIHFFGDPWIPKETTFKPIQVGQPNNQDNKVVADFITPS-------KG 284
G R VGNG I + W+ + +++ + Q+ V+ + S +
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181
Query: 285 WDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIWHYSKNGCYSVKSGYKLAMQLCNDIAS 344
W + + + E + +I + D + W Y+ +G Y+VKSGY + Q+ N +S
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSS 241
Query: 345 ---TSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKK 373
S S + +W + KI+ F+WK LP L R + C C
Sbjct: 242 PQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSC 301
BLAST of Lcy06g016680 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 97.1 bits (240), Expect = 3.3e-20
Identity = 67/229 (29.26%), Postives = 110/229 (48.03%), Query Frame = 0
Query: 154 IKGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPK-- 213
+K RY +++IL+A ++ S W + +LL G R +G+G I D +
Sbjct: 1 MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60
Query: 214 ------ETTFKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISS 273
E T+K + + NN + + + WD K+ V + D I I ++
Sbjct: 61 PRPLNTEETYKEMTI---NNLFERKGSYYF-----WDDSKISQFVDQSDHGFIHRIYLAK 120
Query: 274 VNEEDKWIWHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGT------LWSLKIP 333
+ DK IW+Y+ G Y+V+SGY L L +D ST++ + G+ +W+L I
Sbjct: 121 SKKPDKIIWNYNTTGEYTVRSGYWL---LTHD-PSTNIPAINPPHGSIDLKTRIWNLPIM 180
Query: 334 SKIKLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGC 369
K+K F+W+A + L T L R M + P C C ++ E+I+HAL C
Sbjct: 181 PKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTC 217
BLAST of Lcy06g016680 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 75.5 bits (184), Expect = 1.0e-13
Identity = 42/152 (27.63%), Postives = 65/152 (42.76%), Query Frame = 0
Query: 105 AIPTFIMSCFRLPSTLCDDIHKLMARFW-------------------------------- 164
A+P + MSCFRL LC + M FW
Sbjct: 2 ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61
Query: 165 ------ALLAKQVWRIFTSPNQLVSKVIKGRYAYNMNILNAPIKSNCSVFWRGFVWARSL 219
ALLAKQ +RI P+ L+S++++ RY + +++ + + S WR + R L
Sbjct: 62 LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121
BLAST of Lcy06g016680 vs. TAIR 10
Match:
AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 62.4 bits (150), Expect = 9.1e-10
Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 0
Query: 309 WWGTLWSLKIPSKIKLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGC 368
W G +WSLKI KIKL IWKA + LP L R + + P C CR FETI H L C
Sbjct: 5 WIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCR-DFETITHILFNC 64
Query: 369 KRAK 373
A+
Sbjct: 65 PFAQ 67
BLAST of Lcy06g016680 vs. TAIR 10
Match:
AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 46.6 bits (109), Expect = 5.2e-05
Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 0
Query: 206 DPWIPKETTFKPIQVGQPNNQDNKV-VADFITPSKG-WDLEKLRGVVTEEDVNIIAAIPI 265
DPWIP T N +D+ + V D I + W L++L+ ++ D+ +I I
Sbjct: 8 DPWIP--TILARPAKSILNIRDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPLILGIRP 67
Query: 266 SSVNEEDKWIWHYSKNGCYSVKSGYKLAMQL 295
S D + W ++K+G Y+VKSGY +A L
Sbjct: 68 SRTYLSDGFSWSHTKSGNYTVKSGYWVARDL 96
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 5.7e-25 | 23.41 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
P93295 | 1.5e-12 | 27.63 | Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A803PIB6 | 8.7e-85 | 39.21 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PM68 | 5.7e-84 | 39.80 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NM27 | 2.4e-82 | 39.65 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803Q8E0 | 3.1e-82 | 38.50 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QC00 | 1.0e-80 | 38.90 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 2.1e-30 | 26.35 | Ribonuclease H-like superfamily protein | [more] |
AT3G09510.1 | 3.3e-20 | 29.26 | Ribonuclease H-like superfamily protein | [more] |
ATMG00310.1 | 1.0e-13 | 27.63 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT3G26855.1 | 9.1e-10 | 48.44 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT2G22440.1 | 5.2e-05 | 32.97 | BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... | [more] |