Lcy06g016680 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g016680
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
LocationChr06: 38153997 .. 38155250 (+)
RNA-Seq ExpressionLcy06g016680
SyntenyLcy06g016680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGAAAATGAAAAAGAAGGAAATAAATATGAATTAGCCTCGGGCCAAGTTGTTAATGTAACTAAATCAGCGATGTTCTTTTCGCCTAACGTGAGAGAGGAGGTCCGTGATAATATAAAAAATATTATGGGCATGCAAGTTGTTGAGAATTTAGGACGATATCTAGGGGTACCGTCATCTTTCACTAGAAGCAGGAGAGAGGATTTTAAGGGGGTTAAACAAAGAGTTTGGAAAACCTTGCAAGGTTGGAAAGGGAAATTTTTCTCTATGGGTGGAAAGGAGACTCTCATTAAAAGTGTGGCTCAAGCTATACCCACTTTTATAATGAGTTGTTTCCGCCTTCCAAGTACTCTTTGTGATGACATCCACAAATTGATGGCAAGATTCTGGTGGGGCTCTACAGAATTTAAAAGGAAAATGCATTGAAAAAAATGGGAGAGCCTGTGTGCTCCAAAAGAAGCAGGGGGTTTGAATTTTCGAGACCTAAAAGAATTTAACAGGGCGTTACTTGCAAAGCAAGTTTGGCGAATTTTCACTTCTCCAAATCAGCTGGTCTCCAAAGTCATAAAAGGAAGGTATGCTTACAATATGAATATTCTGAATGCACCAATTAAATCCAACTGCTCTGTTTTCTGGAGAGGTTTTGTTTGGGCGCGTAGTCTACTTTCCAACGGAATTCGCAAACAAGTAGGCAATGGAACTACCATCCATTTTTTCGGGGACCCATGGATTCCAAAGGAAACCACCTTCAAGCCAATTCAAGTTGGTCAGCCGAACAATCAAGATAATAAAGTGGTAGCTGATTTTATCACTCCGTCAAAGGGGTGGGATTTGGAGAAGCTTCGTGGTGTCGTGACGGAGGAGGATGTAAACATAATTGCAGCAATTCCTATAAGTTCAGTTAACGAAGAGGACAAATGGATTTGGCATTATTCCAAAAATGGGTGTTATTCGGTAAAAAGTGGATATAAATTGGCCATGCAGCTTTGTAATGATATAGCGTCAACTTCAGTCAAAAGCCAGAAAGCGTGGTGGGGAACATTATGGAGCTTAAAAATACCTTCCAAGATTAAGCTGTTTATATGGAAGGCATTCCATGAGTGTTTACCAACGAACTATTGCCTCTGGAAAAGGAAGATGGATGTGTCTCCTAAATGCGATATATGTAGGAAGAAGTTCGAAACTATTGACCATGCGCTCTGTGGTTGTAAAAGAGCAAAGACAATTTGTGATCATATTTTCCAATGA

mRNA sequence

ATGGAGGAAGAAAATGAAAAAGAAGGAAATAAATATGAATTAGCCTCGGGCCAAGTTGTTAATGTAACTAAATCAGCGATGTTCTTTTCGCCTAACGTGAGAGAGGAGGTCCGTGATAATATAAAAAATATTATGGGCATGCAAGTTGTTGAGAATTTAGGACGATATCTAGGGGTACCGTCATCTTTCACTAGAAGCAGGAGAGAGGATTTTAAGGGGGTTAAACAAAGAGTTTGGAAAACCTTGCAAGGTTGGAAAGGGAAATTTTTCTCTATGGGTGGAAAGGAGACTCTCATTAAAAGTGTGGCTCAAGCTATACCCACTTTTATAATGAGTTGTTTCCGCCTTCCAAGTACTCTTTGTGATGACATCCACAAATTGATGGCAAGATTCTGGGCGTTACTTGCAAAGCAAGTTTGGCGAATTTTCACTTCTCCAAATCAGCTGGTCTCCAAAGTCATAAAAGGAAGGTATGCTTACAATATGAATATTCTGAATGCACCAATTAAATCCAACTGCTCTGTTTTCTGGAGAGGTTTTGTTTGGGCGCGTAGTCTACTTTCCAACGGAATTCGCAAACAAGTAGGCAATGGAACTACCATCCATTTTTTCGGGGACCCATGGATTCCAAAGGAAACCACCTTCAAGCCAATTCAAGTTGGTCAGCCGAACAATCAAGATAATAAAGTGGTAGCTGATTTTATCACTCCGTCAAAGGGGTGGGATTTGGAGAAGCTTCGTGGTGTCGTGACGGAGGAGGATGTAAACATAATTGCAGCAATTCCTATAAGTTCAGTTAACGAAGAGGACAAATGGATTTGGCATTATTCCAAAAATGGGTGTTATTCGGTAAAAAGTGGATATAAATTGGCCATGCAGCTTTGTAATGATATAGCGTCAACTTCAGTCAAAAGCCAGAAAGCGTGGTGGGGAACATTATGGAGCTTAAAAATACCTTCCAAGATTAAGCTGTTTATATGGAAGGCATTCCATGAGTGTTTACCAACGAACTATTGCCTCTGGAAAAGGAAGATGGATGTGTCTCCTAAATGCGATATATGTAGGAAGAAGTTCGAAACTATTGACCATGCGCTCTGTGGTTGTAAAAGAGCAAAGACAATTTGTGATCATATTTTCCAATGA

Coding sequence (CDS)

ATGGAGGAAGAAAATGAAAAAGAAGGAAATAAATATGAATTAGCCTCGGGCCAAGTTGTTAATGTAACTAAATCAGCGATGTTCTTTTCGCCTAACGTGAGAGAGGAGGTCCGTGATAATATAAAAAATATTATGGGCATGCAAGTTGTTGAGAATTTAGGACGATATCTAGGGGTACCGTCATCTTTCACTAGAAGCAGGAGAGAGGATTTTAAGGGGGTTAAACAAAGAGTTTGGAAAACCTTGCAAGGTTGGAAAGGGAAATTTTTCTCTATGGGTGGAAAGGAGACTCTCATTAAAAGTGTGGCTCAAGCTATACCCACTTTTATAATGAGTTGTTTCCGCCTTCCAAGTACTCTTTGTGATGACATCCACAAATTGATGGCAAGATTCTGGGCGTTACTTGCAAAGCAAGTTTGGCGAATTTTCACTTCTCCAAATCAGCTGGTCTCCAAAGTCATAAAAGGAAGGTATGCTTACAATATGAATATTCTGAATGCACCAATTAAATCCAACTGCTCTGTTTTCTGGAGAGGTTTTGTTTGGGCGCGTAGTCTACTTTCCAACGGAATTCGCAAACAAGTAGGCAATGGAACTACCATCCATTTTTTCGGGGACCCATGGATTCCAAAGGAAACCACCTTCAAGCCAATTCAAGTTGGTCAGCCGAACAATCAAGATAATAAAGTGGTAGCTGATTTTATCACTCCGTCAAAGGGGTGGGATTTGGAGAAGCTTCGTGGTGTCGTGACGGAGGAGGATGTAAACATAATTGCAGCAATTCCTATAAGTTCAGTTAACGAAGAGGACAAATGGATTTGGCATTATTCCAAAAATGGGTGTTATTCGGTAAAAAGTGGATATAAATTGGCCATGCAGCTTTGTAATGATATAGCGTCAACTTCAGTCAAAAGCCAGAAAGCGTGGTGGGGAACATTATGGAGCTTAAAAATACCTTCCAAGATTAAGCTGTTTATATGGAAGGCATTCCATGAGTGTTTACCAACGAACTATTGCCTCTGGAAAAGGAAGATGGATGTGTCTCCTAAATGCGATATATGTAGGAAGAAGTTCGAAACTATTGACCATGCGCTCTGTGGTTGTAAAAGAGCAAAGACAATTTGTGATCATATTTTCCAATGA

Protein sequence

MEEENEKEGNKYELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDFKGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARFWALLAKQVWRIFTSPNQLVSKVIKGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETTFKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIWHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTICDHIFQ
Homology
BLAST of Lcy06g016680 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.7e-25
Identity = 81/346 (23.41%), Postives = 152/346 (43.93%), Query Frame = 0

Query: 65  RSRREDFKGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDI 124
           R  ++ F  + +RV   + GW+ K  S  G+ TL K+V  ++P   MS   LP ++ + +
Sbjct: 7   RINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRL 66

Query: 125 HKLMARF---------------W----------------------ALLAKQVWRIFTSPN 184
            +L   F               W                      AL++K  WR+    N
Sbjct: 67  DQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKN 126

Query: 185 QLVSKVIKGRYAYNMNILNAP---IKSNCSVFWRGF-VWARSLLSNGIRKQVGNGTTIHF 244
            L + V++ +Y     I ++     K + S  WR   +  R ++S+G+    G+G  I F
Sbjct: 127 SLWTLVLQKKYHVG-EIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRF 186

Query: 245 FGDPWIPKETTFKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPI 304
           + D W+  +   +     +P + D  V  D   P +GWD  K+    T      + A+ +
Sbjct: 187 WTDRWVSGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVL 246

Query: 305 SSV-NEEDKWIWHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKI 364
             V    D+  W +S++G +SV+S Y+  M   +++   ++ S   ++  LW +++P ++
Sbjct: 247 DLVTGARDRLSWKFSQDGQFSVRSAYE--MLTVDEVPRPNMAS---FFNCLWKVRVPERV 306

Query: 365 KLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGC 369
           K F+W   ++ + T     +R +  S  C +C+   E++ H L  C
Sbjct: 307 KTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDC 346

BLAST of Lcy06g016680 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.5e-12
Identity = 42/152 (27.63%), Postives = 65/152 (42.76%), Query Frame = 0

Query: 105 AIPTFIMSCFRLPSTLCDDIHKLMARFW-------------------------------- 164
           A+P + MSCFRL   LC  +   M  FW                                
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 165 ------ALLAKQVWRIFTSPNQLVSKVIKGRYAYNMNILNAPIKSNCSVFWRGFVWARSL 219
                 ALLAKQ +RI   P+ L+S++++ RY  + +++   + +  S  WR  +  R L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match: A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 8.7e-85
Identity = 158/403 (39.21%), Postives = 226/403 (56.08%), Query Frame = 0

Query: 12   YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
            Y  ASGQ++N  KS M FSPN  E V+ + + I+GM +      YLG+P+   R + + F
Sbjct: 1180 YHRASGQLLNTDKSVMSFSPNTPEAVKLSFQQILGMPICACHESYLGLPAYSERDKSQLF 1239

Query: 72   KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
              +K+R+WK +  W  K FS+GGKE L+K+V QAIPT+ MSCFRL +  C  I  +MARF
Sbjct: 1240 NNIKERIWKLMHAWSDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSAKFCKQIETMMARF 1299

Query: 132  W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
            W                                     A LAKQ WRIF +PN L+S+V+
Sbjct: 1300 WWGSSTDNKKIHWKNWKSLCTSKRDGGLGFRSFVHFNQAFLAKQAWRIFQTPNSLLSRVL 1359

Query: 192  KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
            KGRY +  + + A +    S+ W+G VW R LLS G+  ++G+GT ++   D WIP    
Sbjct: 1360 KGRYYHQNDFMTAKVSGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEY 1419

Query: 252  FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
            FKP++        + +VAD+IT ++ WDLE L    +  D++ I  IP+S  +  D+W W
Sbjct: 1420 FKPLRF---TGSCSNLVADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRW 1479

Query: 312  HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
            HY  +G Y+VKSGY LA  L N   S+S  SQ+AWW   W L +PSK+++F W+  +  L
Sbjct: 1480 HYDSSGDYTVKSGYNLACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSAL 1539

Query: 372  PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTICDH 378
            P    L+ RK+  S  C +C + +E+I HAL  C  AK++  H
Sbjct: 1540 PVAQNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQH 1579

BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match: A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 5.7e-84
Identity = 158/397 (39.80%), Postives = 220/397 (55.42%), Query Frame = 0

Query: 11  KYELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRRED 70
           KY +ASGQVVN  KS M F   V + ++  +  +MG++VV+N G+YLG+PS   R++++ 
Sbjct: 45  KYSIASGQVVNFHKSEMCFGRTVSDPLKSQLAALMGVKVVDNYGKYLGLPSFVGRTKKQH 104

Query: 71  FKGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMAR 130
           F+ +K +VW  L+GWKG FFS  GKE LIK++ QAIPT+ MSCFRLP    + IH + AR
Sbjct: 105 FEFIKTKVWNKLKGWKGSFFSAAGKEILIKAIVQAIPTYTMSCFRLPKKTINSIHSMAAR 164

Query: 131 FW-------------------------------------ALLAKQVWRIFTSPNQLVSKV 190
           FW                                     ALLAKQ+WR    PN L SKV
Sbjct: 165 FWWGSSEKDAKIHWCKWSTLCKHKEQGGLGFRDLGLFNQALLAKQIWRCIRYPNSLCSKV 224

Query: 191 IKGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKET 250
           +K  Y  N+ +L A   ++ S  WR  VW + ++  G R ++GNG ++    DPW+P+  
Sbjct: 225 LKASYFPNVGVLEAKSGNHASFVWRSLVWGKKIIQKGYRWRIGNGNSVRVLEDPWLPRPV 284

Query: 251 TFKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 310
           TFK     +P+  +   V D +  +  WD E +R      D  +I  +P S    EDK +
Sbjct: 285 TFKVYD--KPSLPEGMYVVDLMKGNGEWDEEFIRAFFNPTDAELILGMPTSEWEIEDKIL 344

Query: 311 WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 370
           WHYSKNG YSV+SGY++A  L      ++ ++ + WW  LW LKIP K+K F+WK  H  
Sbjct: 345 WHYSKNGEYSVRSGYRMAAALQVHDIQSNTEATERWWRLLWKLKIPPKVKHFVWKMAHSW 404

BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match: A0A803NM27 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 159/401 (39.65%), Postives = 217/401 (54.11%), Query Frame = 0

Query: 12   YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
            Y  ASGQ +N  KS M FSPN  E  + + +NI+GM + E    YLG+P+   R +++ F
Sbjct: 1128 YHKASGQQLNTDKSVMSFSPNTSEASKQSFQNILGMPICECHESYLGLPAYSERDKKQLF 1187

Query: 72   KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
              +K+R+WK L  W  K FS+GGKE L+K+V Q+IPT+ MSCF+LP   C +I  LM+ F
Sbjct: 1188 NQIKERIWKLLNAWTDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCHEIESLMSNF 1247

Query: 132  W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
            W                                     ALLAKQ WR+F +P  L+ +V+
Sbjct: 1248 WWGSTSDKKKIHWKQWKFLCKSKLEGGLGFRNFIHFNQALLAKQAWRLFQNPESLLFRVL 1307

Query: 192  KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
            KGRY    + L+A      S+ W+GF W R LL  G+R QVGNG  I    DPWIP  + 
Sbjct: 1308 KGRYFSRSDFLSAATCGVSSLTWQGFCWGRELLKKGLRLQVGNGFDIACATDPWIPGNSI 1367

Query: 252  FKPIQ-VGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 311
            F PI   G P N     VAD+ITP K W++ KL    +  DV  I ++P+S     D W+
Sbjct: 1368 FTPIYFTGAPTN----TVADYITPEKEWNVSKLNADFSSADVERILSLPLSHHAHSDYWV 1427

Query: 312  WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 371
            WH +  G Y VKSGY +A  L ++   +      +WW + W LK+P K+KLF WKA H  
Sbjct: 1428 WH-ATGGQYEVKSGYHVACLLADENPVSVSSPNVSWWKSFWQLKLPPKVKLFAWKAIHNA 1487

Query: 372  LPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
            LP    L+KRK   S  C +C   +E++ HA+  CK A+ +
Sbjct: 1488 LPVASELYKRKSLTSASCSLCLNAWESVGHAMFACKHARHV 1523

BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match: A0A803Q8E0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.1e-82
Identity = 154/400 (38.50%), Postives = 218/400 (54.50%), Query Frame = 0

Query: 12  YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
           Y  ASGQ++N +KS M FSPN  +  +D   + +GM + +   RYLG+P+   R ++E F
Sbjct: 590 YHSASGQLLNTSKSVMSFSPNTSQSAKDFFHHTLGMPISDCHERYLGLPAYSERDKKEMF 649

Query: 72  KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
             VK+R+W+ L  W  K FS+GGKE L+K+V Q+IPT+ MSCFRLPST C  +  +MA F
Sbjct: 650 SDVKERIWQKLHAWNDKLFSVGGKEVLLKAVVQSIPTYAMSCFRLPSTFCSQLESMMANF 709

Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
           W                                     ALLAKQ WRIF  PN L+S+++
Sbjct: 710 WWGSTKDGSKIHWRSWKLLCKSKFEGGMGFRSFVNFNKALLAKQAWRIFEMPNSLLSRLL 769

Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
           K RY  N N L A +  + S+ W+G  W R LL  G+R ++GNG T+    D WIP  T 
Sbjct: 770 KHRYFSNNNFLEARLGHSPSLIWQGIHWGRELLIEGLRYKIGNGFTVSAGFDRWIPGFTD 829

Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
           FKP+     N  D+  V+ FIT  + W++  L       DV+ I  IP+S     D+ IW
Sbjct: 830 FKPVSF---NGADSMTVSHFITDQREWNISLLNQYFQSIDVDKIVTIPLSFFPSNDRLIW 889

Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
           H++ +GCY+V SG+ LA  L  +  + +  S   WW T W+L +PSK+K+F W+     L
Sbjct: 890 HHTTSGCYTVNSGFHLAENLAENQQTQASSSHSTWWKTFWNLDLPSKVKIFAWRVMQNAL 949

Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
           P    L +RK+  S  C +C   +E+I HAL  C  A+ +
Sbjct: 950 PVATGLVRRKVIDSATCSLCNNAWESIGHALFNCTTARKV 986

BLAST of Lcy06g016680 vs. ExPASy TrEMBL
Match: A0A803QC00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.0e-80
Identity = 156/401 (38.90%), Postives = 216/401 (53.87%), Query Frame = 0

Query: 12  YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
           Y  ASGQ +N  KS M FSPN  E  + + +NI+GM + E    YLG+P+   R +++ F
Sbjct: 130 YHKASGQQLNTDKSVMSFSPNTSEASKQSFRNILGMPICECHESYLGLPAYSERDKKQLF 189

Query: 72  KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
             +K+R+WK L  W  K FS+GGKE L+K+V Q+IPT+ MSCF+LP   C +I  LM+ F
Sbjct: 190 NQIKERIWKLLNAWTDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCHEIESLMSNF 249

Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
           W                                     ALLAKQ WR+F +P  L+ +V+
Sbjct: 250 WWGSTSDKKKIHWKQWKFLCKSKLEGGLGFQNFIHFNQALLAKQAWRLFQNPESLLYRVL 309

Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
           KGRY   ++ L+A      S+ W+G  W R LL  GIR QVGNG  I    DPWIP  + 
Sbjct: 310 KGRYFSRIDFLSAATCGVSSLTWQGICWGRELLKKGIRLQVGNGFGIACATDPWIPGNSI 369

Query: 252 FKPI-QVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 311
             P+   G P N     VAD+ITP K W++ KL    +  DV  I ++P+S     D W+
Sbjct: 370 LTPVFFTGDPTN----TVADYITPEKEWNVSKLTADFSSVDVERILSLPLSHHATSDYWV 429

Query: 312 WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 371
           WH +  G Y VKSGY +A  L +D  ++      +WW + W LK+P K+K+F WKA H  
Sbjct: 430 WH-ATGGQYEVKSGYHVACLLADDTFASVSSPHVSWWKSFWQLKLPPKVKIFAWKAIHNA 489

Query: 372 LPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
           LP    L+KRK      C +C   +E++ HA+  CK A+ +
Sbjct: 490 LPVASELFKRKSLTFASCSLCLNAWESVGHAMFSCKHARHV 525

BLAST of Lcy06g016680 vs. NCBI nr
Match: XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])

HSP 1 Score: 323.9 bits (829), Expect = 1.8e-84
Identity = 158/403 (39.21%), Postives = 226/403 (56.08%), Query Frame = 0

Query: 12   YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
            Y  ASGQ++N  KS M FSPN  E V+ + + I+GM +      YLG+P+   R + + F
Sbjct: 720  YHRASGQLLNTDKSVMSFSPNTPEAVKLSFQQILGMPICACHESYLGLPAYSERDKSQLF 779

Query: 72   KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
              +K+R+WK +  W  K FS+GGKE L+K+V QAIPT+ MSCFRL +  C  I  +MARF
Sbjct: 780  NNIKERIWKLMHAWSDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSAKFCKQIETMMARF 839

Query: 132  W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
            W                                     A LAKQ WRIF +PN L+S+V+
Sbjct: 840  WWGSSTDNKKIHWKNWKSLCTSKRDGGLGFRSFVHFNQAFLAKQAWRIFQTPNSLLSRVL 899

Query: 192  KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
            KGRY +  + + A +    S+ W+G VW R LLS G+  ++G+GT ++   D WIP    
Sbjct: 900  KGRYYHQNDFMTAKVSGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEY 959

Query: 252  FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
            FKP++        + +VAD+IT ++ WDLE L    +  D++ I  IP+S  +  D+W W
Sbjct: 960  FKPLRF---TGSCSNLVADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRW 1019

Query: 312  HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
            HY  +G Y+VKSGY LA  L N   S+S  SQ+AWW   W L +PSK+++F W+  +  L
Sbjct: 1020 HYDSSGDYTVKSGYNLACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSAL 1079

Query: 372  PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTICDH 378
            P    L+ RK+  S  C +C + +E+I HAL  C  AK++  H
Sbjct: 1080 PVAQNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQH 1119

BLAST of Lcy06g016680 vs. NCBI nr
Match: XP_030496634.1 (uncharacterized protein LOC115712492 [Cannabis sativa])

HSP 1 Score: 313.9 bits (803), Expect = 1.9e-81
Identity = 153/400 (38.25%), Postives = 215/400 (53.75%), Query Frame = 0

Query: 12  YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
           Y  ASGQ++N TKS M FSPN  +  +D     +GM + +   RYLG+P+   R ++E F
Sbjct: 518 YHSASGQLLNTTKSVMSFSPNTSQSAKDFFHRTLGMPISDCHERYLGLPAYSERDKKEMF 577

Query: 72  KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
             VK+R+W+ L  W  K FS+GGKE L+K+V Q+IPT+ MSCFRLPST C  +  +MA F
Sbjct: 578 SDVKERIWQKLHAWNDKLFSVGGKEVLLKAVVQSIPTYAMSCFRLPSTFCSQLESMMANF 637

Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
           W                                     ALLAKQ WRI   PN L+S+++
Sbjct: 638 WWGSTKDGSKIHWRSWKLLCKSKFEGGMGFRSFVNFNKALLAKQAWRILEMPNSLLSRLL 697

Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
           K RY  N N L A +  + S+ W+G  W R LL  G+R ++GNG T+    D WIP  T 
Sbjct: 698 KHRYFSNNNFLEARLGHSPSLTWQGIHWGRELLIEGLRYKIGNGVTVSAGFDRWIPGFTD 757

Query: 252 FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
           FKP+     N  D   V+ FIT  + W++  L       DV+ I  IP+S     D+ IW
Sbjct: 758 FKPVSF---NGADTMTVSHFITDQREWNISLLNQYFQSIDVDKIVTIPLSFFQTNDRLIW 817

Query: 312 HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
           H++  GCY+V SG+ LA  L  +  + +  S   WW T W+L++PSK+K+F W+     L
Sbjct: 818 HHTTTGCYTVNSGFHLAENLAENQQTHASSSHSTWWKTFWNLELPSKVKIFAWRVMQNAL 877

Query: 372 PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
           P    L +RK+  S  C +C   +E++ HAL  C  A+ +
Sbjct: 878 PVATGLVRRKVIDSATCSLCNNAWESVGHALFNCTTARKV 914

BLAST of Lcy06g016680 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa])

HSP 1 Score: 312.8 bits (800), Expect = 4.2e-81
Identity = 160/400 (40.00%), Postives = 218/400 (54.50%), Query Frame = 0

Query: 12   YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
            Y  ASGQV+N  K  + FS N R+  +   K+++GM +     +YLG+PS   +++++ F
Sbjct: 719  YSRASGQVINPEKCVLSFSENTRQHEQIFFKDLLGMPIQPCHEQYLGLPSFSGKNKKQLF 778

Query: 72   KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
             G+  ++WK L  WK   FS GGKE L+K+V QAIPT+ MSCFRLP TLC  I  +MARF
Sbjct: 779  GGITDKIWKLLSSWKEHLFSAGGKEVLLKAVVQAIPTYAMSCFRLPVTLCHQIESMMARF 838

Query: 132  W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
            W                                     ALLAKQ WRI   PN L+S ++
Sbjct: 839  WWGSTATGKTIHWKNWNFLCKAKVQGGLGFRNFIHFNQALLAKQAWRILEFPNSLLSNLL 898

Query: 192  KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
            + RY  N N L A + SN S+ WR  VW + LL  G+R +VG+G  I+   D W+P  TT
Sbjct: 899  RHRYFSNGNYLIAGLGSNPSLTWRSLVWGKELLLKGLRWRVGSGERINCKTDSWLPGHTT 958

Query: 252  FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
            FKP     P+   N +VAD IT  + WD+  L     + D+N + +IP+S    +D  IW
Sbjct: 959  FKPYFFKGPD--PNLLVADLITEHRTWDMISLETNFNQADINRVLSIPLSPYPHDDVLIW 1018

Query: 312  HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
            + S  G Y+VKSGY  A+ L     ST   S + WW   W LK+P K+++F+WK FH  L
Sbjct: 1019 NQSFTGVYNVKSGYHFAVSLAEQDDSTCSNSIEHWWSNFWKLKLPPKVRIFVWKVFHTSL 1078

Query: 372  PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
            P    L++R +  SP C IC    ET+ HAL  C RAK +
Sbjct: 1079 PVAAELYRRHIAFSPYCTICNSCEETVHHALFSCPRAKAV 1116

BLAST of Lcy06g016680 vs. NCBI nr
Match: XP_030477990.1 (uncharacterized protein LOC115695032 [Cannabis sativa])

HSP 1 Score: 310.5 bits (794), Expect = 2.1e-80
Identity = 156/401 (38.90%), Postives = 216/401 (53.87%), Query Frame = 0

Query: 12  YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
           Y  ASGQ +N  KS M FSPN  E  + + +NI+GM + E    YLG+P+   R +++ F
Sbjct: 334 YHKASGQQLNTDKSVMSFSPNTSEASKQSFRNILGMPICECHESYLGLPAYSERDKKQLF 393

Query: 72  KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
             +K+R+WK L  W  K FS+GGKE L+K+V Q+IPT+ MSCF+LP   C +I  LM+ F
Sbjct: 394 NQIKERIWKLLNAWTDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCHEIESLMSNF 453

Query: 132 W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
           W                                     ALLAKQ WR+F +P  L+ +V+
Sbjct: 454 WWGSTSDKKKIHWKQWKFLCKSKLEGGLGFQNFIHFNQALLAKQAWRLFQNPESLLYRVL 513

Query: 192 KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
           KGRY   ++ L+A      S+ W+G  W R LL  GIR QVGNG  I    DPWIP  + 
Sbjct: 514 KGRYFSRIDFLSAATCGVSSLTWQGICWGRELLKKGIRLQVGNGFGIACATDPWIPGNSI 573

Query: 252 FKPI-QVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWI 311
             P+   G P N     VAD+ITP K W++ KL    +  DV  I ++P+S     D W+
Sbjct: 574 LTPVFFTGDPTN----TVADYITPEKEWNVSKLTADFSSVDVERILSLPLSHHATSDYWV 633

Query: 312 WHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHEC 371
           WH +  G Y VKSGY +A  L +D  ++      +WW + W LK+P K+K+F WKA H  
Sbjct: 634 WH-ATGGQYEVKSGYHVACLLADDTFASVSSPHVSWWKSFWQLKLPPKVKIFAWKAIHNA 693

Query: 372 LPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
           LP    L+KRK      C +C   +E++ HA+  CK A+ +
Sbjct: 694 LPVASELFKRKSLTFASCSLCLNAWESVGHAMFSCKHARHV 729

BLAST of Lcy06g016680 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])

HSP 1 Score: 310.1 bits (793), Expect = 2.7e-80
Identity = 158/400 (39.50%), Postives = 226/400 (56.50%), Query Frame = 0

Query: 12   YELASGQVVNVTKSAMFFSPNVREEVRDNIKNIMGMQVVENLGRYLGVPSSFTRSRREDF 71
            Y  ASGQ++N  KS + FSPN R   +   ++++ M +     +YLG+PS   R + + F
Sbjct: 719  YSRASGQMLNPEKSVLSFSPNTRTTEQHFFQHLLNMPIQPCHEQYLGLPSFSGRDKSQLF 778

Query: 72   KGVKQRVWKTLQGWKGKFFSMGGKETLIKSVAQAIPTFIMSCFRLPSTLCDDIHKLMARF 131
             G+  ++WK +  W+ + FS+GGKE L+K+V QAIPT+ MSCF+LP  LC+ I +LM+RF
Sbjct: 779  SGITDKIWKLMNAWREQLFSIGGKEVLLKAVVQAIPTYAMSCFQLPVKLCNQIEQLMSRF 838

Query: 132  W-------------------------------------ALLAKQVWRIFTSPNQLVSKVI 191
            W                                     ALLAKQ WRI   P+ L+++V+
Sbjct: 839  WWGKSANGNAIHWKNWKFLCKSKVHGGMGFRNFVHFNQALLAKQAWRILEDPSSLIARVL 898

Query: 192  KGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPKETT 251
            K RY      L A   +  S+ W+  VW + LL  G+R ++G+G  ++    PWIP  + 
Sbjct: 899  KSRYFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQPWIPGPSN 958

Query: 252  FKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIW 311
            FKP+    P ++D K VADFIT S+ WD+ KL+   T  DV+ I +IP+S    ED  +W
Sbjct: 959  FKPLLFLSP-DRDVK-VADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLW 1018

Query: 312  HYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECL 371
            HYS  G Y+VKSGYKLA  +  D    S  + + WW   W LK+PSKI++F W+A+HE L
Sbjct: 1019 HYSSAGFYTVKSGYKLASDV-PDSQPNSSHTTETWWQYFWGLKLPSKIRIFAWRAYHEAL 1078

Query: 372  PTNYCLWKRKMDVSPKCDICRKKFETIDHALCGCKRAKTI 375
            PT   L  R +  SP+C +C+   ETI+HA   C RAK +
Sbjct: 1079 PTAAILQYRHISSSPQCPLCQVHLETINHAFFWCNRAKQV 1115

BLAST of Lcy06g016680 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-30
Identity = 83/315 (26.35%), Postives = 134/315 (42.54%), Query Frame = 0

Query: 105 AIPTFIMSCFRLPSTLCDDIHKLMARFW-------------------------------- 164
           A+PT+ M+CF LP T+C  I  ++A FW                                
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 165 -----ALLAKQVWRIFTSPNQLVSKVIKGRYAYNMNILNAPIKSNCSVFWRGFVWARSLL 224
                ALL KQ+WR+ + P  L++KV K RY +  + LNAP+ S  S  W+    ++ +L
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 225 SNGIRKQVGNGTTIHFFGDPWIPKETTFKPIQVGQPNNQDNKVVADFITPS-------KG 284
             G R  VGNG  I  +   W+  +     +++ +   Q+   V+  +  S       + 
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181

Query: 285 WDLEKLRGVVTEEDVNIIAAIPISSVNEEDKWIWHYSKNGCYSVKSGYKLAMQLCNDIAS 344
           W  + +  +  E +  +I  +        D + W Y+ +G Y+VKSGY +  Q+ N  +S
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSS 241

Query: 345 ---TSVKSQKAWWGTLWSLKIPSKIKLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKK 373
               S  S    +  +W  +   KI+ F+WK     LP    L  R +     C  C   
Sbjct: 242 PQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSC 301

BLAST of Lcy06g016680 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-20
Identity = 67/229 (29.26%), Postives = 110/229 (48.03%), Query Frame = 0

Query: 154 IKGRYAYNMNILNAPIKSNCSVFWRGFVWARSLLSNGIRKQVGNGTTIHFFGDPWIPK-- 213
           +K RY  +++IL+A ++   S  W   +   +LL  G R  +G+G  I    D  +    
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60

Query: 214 ------ETTFKPIQVGQPNNQDNKVVADFITPSKGWDLEKLRGVVTEEDVNIIAAIPISS 273
                 E T+K + +   NN   +  + +      WD  K+   V + D   I  I ++ 
Sbjct: 61  PRPLNTEETYKEMTI---NNLFERKGSYYF-----WDDSKISQFVDQSDHGFIHRIYLAK 120

Query: 274 VNEEDKWIWHYSKNGCYSVKSGYKLAMQLCNDIASTSVKSQKAWWGT------LWSLKIP 333
             + DK IW+Y+  G Y+V+SGY L   L +D  ST++ +     G+      +W+L I 
Sbjct: 121 SKKPDKIIWNYNTTGEYTVRSGYWL---LTHD-PSTNIPAINPPHGSIDLKTRIWNLPIM 180

Query: 334 SKIKLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGC 369
            K+K F+W+A  + L T   L  R M + P C  C ++ E+I+HAL  C
Sbjct: 181 PKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTC 217

BLAST of Lcy06g016680 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-13
Identity = 42/152 (27.63%), Postives = 65/152 (42.76%), Query Frame = 0

Query: 105 AIPTFIMSCFRLPSTLCDDIHKLMARFW-------------------------------- 164
           A+P + MSCFRL   LC  +   M  FW                                
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 165 ------ALLAKQVWRIFTSPNQLVSKVIKGRYAYNMNILNAPIKSNCSVFWRGFVWARSL 219
                 ALLAKQ +RI   P+ L+S++++ RY  + +++   + +  S  WR  +  R L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

BLAST of Lcy06g016680 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 62.4 bits (150), Expect = 9.1e-10
Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 0

Query: 309 WWGTLWSLKIPSKIKLFIWKAFHECLPTNYCLWKRKMDVSPKCDICRKKFETIDHALCGC 368
           W G +WSLKI  KIKL IWKA +  LP    L  R + + P C  CR  FETI H L  C
Sbjct: 5   WIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCR-DFETITHILFNC 64

Query: 369 KRAK 373
             A+
Sbjct: 65  PFAQ 67

BLAST of Lcy06g016680 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 5.2e-05
Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 0

Query: 206 DPWIPKETTFKPIQVGQPNNQDNKV-VADFITPSKG-WDLEKLRGVVTEEDVNIIAAIPI 265
           DPWIP  T          N +D+ + V D I  +   W L++L+ ++   D+ +I  I  
Sbjct: 8   DPWIP--TILARPAKSILNIRDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPLILGIRP 67

Query: 266 SSVNEEDKWIWHYSKNGCYSVKSGYKLAMQL 295
           S     D + W ++K+G Y+VKSGY +A  L
Sbjct: 68  SRTYLSDGFSWSHTKSGNYTVKSGYWVARDL 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F65.7e-2523.41Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P932951.5e-1227.63Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A803PIB68.7e-8539.21Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PM685.7e-8439.80Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803NM272.4e-8239.65Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q8E03.1e-8238.50Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QC001.0e-8038.90Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_030497600.11.8e-8439.21uncharacterized protein LOC115713257 [Cannabis sativa][more]
XP_030496634.11.9e-8138.25uncharacterized protein LOC115712492 [Cannabis sativa][more]
XP_030508852.14.2e-8140.00uncharacterized protein LOC115723496 [Cannabis sativa][more]
XP_030477990.12.1e-8038.90uncharacterized protein LOC115695032 [Cannabis sativa][more]
XP_030509050.12.7e-8039.50uncharacterized protein LOC115723712 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT4G29090.12.1e-3026.35Ribonuclease H-like superfamily protein [more]
AT3G09510.13.3e-2029.26Ribonuclease H-like superfamily protein [more]
ATMG00310.11.0e-1327.63RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G26855.19.1e-1048.44RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT2G22440.15.2e-0532.97BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 282..373
e-value: 7.6E-18
score: 65.0
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 11..330
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 11..330

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g016680.1Lcy06g016680.1mRNA