Lcy06g016180 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAGAAGTCTTGATAAGGTTAGGAAGTGACTATTAAAGTTCAAACTTGTTTTTGTGTGCAACAGTCCTGAGACATTAGAAAGAGAAAATAAACTGAACGGTGTGTCTCAATGGTGATTATTTATGGTTCCTTATGCTCTCTTAATGAAAATTTTATTGCATAGTTTCTTTTTAGGGGAGGCTCTCAAAAATGATTTCATCTTTTTGTAAGCTTTGGTTTGTCTTAAGAATAAGTATAAACTGAATGCCTTGTTCTTATTGGTTCTTCATGTGTAGAAAGTACAATTTGATGTTCTTAGTGGTTTTTGTGGCTCAAACTTAATTGTAAATCCTGCTCCTAGGAAGACCTTCAGAGAACATGCTTACCTAAGGTCTTTAGTAAACGTTGATGGAACAACAGCCTCTGAGGTACTTTTTGTTGATCAATTTCTTCTGATGACCAGTATATTTCTAACATATATGGCTGGAGTAATATCTTTAATTACCAAAGTCTAATCAACCTAGAATTATCATCTCTCAAACCGATTCAGCCTCAGATATCCCAACCTTTTCTGGTAGGTAAGGGTGCACAGTTTACAAGGTTGAGATATGTTGTCGCTAACTAACATAATTTTCTGTGTGCTGCGTTGTTATTTGATGTGTATATCTGCACTTTATGTCTACTCCTGTTTACTTTGAGGTTTTATATTTCATTTATATATTTTTTTTATTGCAGTGGCATGAAGGCTGATGATCAAATTAATCCGAAGCATGCATTAGATGTTGTTAAAGGAAAGATTTTGGATTTTCTAGATGCTTTTGAACGTAGGAGAAGTATGGAAAATGAGGTATTTGAATTTGCAGAATGTCATGCCAAACAACCTCTAAGCTTGAATGCAATTGCTGAGGGTCCGAGGTTAGGATTGCTTTGGGCTTCTTTTCAACTAATTGAGGAAGAGGCAGGCATCTAACTGTACTGTACTCTCTTGTGACATTATATCCTGCATGTTCTTTTTAATCTTTGGGTGGTTGTTACTTGCTAGTTGCTATGTGGTTATTATATTTGGCATTACGAGATAAATATGCAAACTGGTGTTGAAACTTGAATATTGATGAAAAGAGGAATGTATTTTTTCCCTTGTCATTTTTAGCCTTCTAGGCATCTTCAACCATGATAAGTTATTTTCTTTAATAGTATTTATTTAATTTTTAATAATCGCCTATTGTTACGAGTTCTAACCTTACATGGGATCTGCAGATTTACAATGAGCTGTCTGTATTTTTTATGGGAGGTTATATTATGATGATATTTGCATAATGCTTGCTTCTATTTCTGCTTTTTCCATCACGAGCTTCTCCATCTCTCTATTGCTAGGGAATAATTATTTACAAGAAAATTTAGCCAAAGAGGACAAATTGGAAGCTAGAAACTTTGCCTAGTTCCATATTTCCTCTTTCCTCCTTGTCTGAGAAGATTATGTGCATACATTGTAGCCACACTTTCCAAAGCAGGGTTTTCAGCCCATT ATGTCTAGAAGTCTTGATAAGAAAGTACAATTTGATGTTCTTAGTGGTTTTTGTGGCTCAAACTTAATTGTAAATCCTGCTCCTAGGAAGACCTTCAGAGAACATGCTTACCTAAGGTCTTTAGTAAACGTTGATGGAACAACAGCCTCTGAGCCTCAGATATCCCAACCTTTTCTGGTAGGTAAGGGTGCACAGTTTACAAGTGGCATGAAGGCTGATGATCAAATTAATCCGAAGCATGCATTAGATGTTGTTAAAGGAAAGATTTTGGATTTTCTAGATGCTTTTGAACGTAGGAGAAGTATGGAAAATGAGGTATTTGAATTTGCAGAATGTCATGCCAAACAACCTCTAAGCTTGAATGCAATTGCTGAGGGTCCGAGGTTAGGATTGCTTTGGGCTTCTTTTCAACTAATTGAGGAAGAGGCAGGCATCTAACTGTACTGTACTCTCTTGTGACATTATATCCTGCATGTTCTTTTTAATCTTTGGGTGGTTGTTACTTGCTAGTTGCTATGTGGTTATTATATTTGGCATTACGAGATAAATATGCAAACTGGTGTTGAAACTTGAATATTGATGAAAAGAGGAATGTATTTTTTCCCTTGTCATTTTTAGCCTTCTAGGCATCTTCAACCATGATAAGTTATTTTCTTTAATAGTATTTATTTAATTTTTAATAATCGCCTATTGTTACGAGTTCTAACCTTACATGGGATCTGCAGATTTACAATGAGCTGTCTGTATTTTTTATGGGAGGTTATATTATGATGATATTTGCATAATGCTTGCTTCTATTTCTGCTTTTTCCATCACGAGCTTCTCCATCTCTCTATTGCTAGGGAATAATTATTTACAAGAAAATTTAGCCAAAGAGGACAAATTGGAAGCTAGAAACTTTGCCTAGTTCCATATTTCCTCTTTCCTCCTTGTCTGAGAAGATTATGTGCATACATTGTAGCCACACTTTCCAAAGCAGGGTTTTCAGCCCATT ATGTCTAGAAGTCTTGATAAGAAAGTACAATTTGATGTTCTTAGTGGTTTTTGTGGCTCAAACTTAATTGTAAATCCTGCTCCTAGGAAGACCTTCAGAGAACATGCTTACCTAAGGTCTTTAGTAAACGTTGATGGAACAACAGCCTCTGAGCCTCAGATATCCCAACCTTTTCTGGTAGGTAAGGGTGCACAGTTTACAAGTGGCATGAAGGCTGATGATCAAATTAATCCGAAGCATGCATTAGATGTTGTTAAAGGAAAGATTTTGGATTTTCTAGATGCTTTTGAACGTAGGAGAAGTATGGAAAATGAGGTATTTGAATTTGCAGAATGTCATGCCAAACAACCTCTAAGCTTGAATGCAATTGCTGAGGGTCCGAGGTTAGGATTGCTTTGGGCTTCTTTTCAACTAATTGAGGAAGAGGCAGGCATCTAA MSRSLDKKVQFDVLSGFCGSNLIVNPAPRKTFREHAYLRSLVNVDGTTASEPQISQPFLVGKGAQFTSGMKADDQINPKHALDVVKGKILDFLDAFERRRSMENEVFEFAECHAKQPLSLNAIAEGPRLGLLWASFQLIEEEAGI Homology
BLAST of Lcy06g016180 vs. ExPASy TrEMBL
Match: A0A6J1DDE2 (uncharacterized protein LOC111019333 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111019333 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.8e-46 Identity = 107/161 (66.46%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Lcy06g016180 vs. ExPASy TrEMBL
Match: A0A6J1DC25 (uncharacterized protein LOC111019333 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019333 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.8e-46 Identity = 107/161 (66.46%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Lcy06g016180 vs. ExPASy TrEMBL
Match: A0A6J1DCX7 (uncharacterized protein LOC111019333 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019333 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.8e-46 Identity = 107/161 (66.46%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Lcy06g016180 vs. ExPASy TrEMBL
Match: A0A6J1GNV1 (uncharacterized protein LOC111456110 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456110 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.9e-44 Identity = 104/161 (64.60%), Postives = 111/161 (68.94%), Query Frame = 0
BLAST of Lcy06g016180 vs. ExPASy TrEMBL
Match: A0A6J1GQ87 (uncharacterized protein LOC111456110 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456110 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.9e-44 Identity = 104/161 (64.60%), Postives = 111/161 (68.94%), Query Frame = 0
BLAST of Lcy06g016180 vs. NCBI nr
Match: XP_022151393.1 (uncharacterized protein LOC111019333 isoform X2 [Momordica charantia]) HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45 Identity = 107/161 (66.46%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Lcy06g016180 vs. NCBI nr
Match: XP_022151402.1 (uncharacterized protein LOC111019333 isoform X3 [Momordica charantia]) HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45 Identity = 107/161 (66.46%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Lcy06g016180 vs. NCBI nr
Match: XP_022151384.1 (uncharacterized protein LOC111019333 isoform X1 [Momordica charantia]) HSP 1 Score: 193.4 bits (490), Expect = 1.4e-45 Identity = 107/161 (66.46%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of Lcy06g016180 vs. NCBI nr
Match: XP_038898895.1 (uncharacterized protein LOC120086352 isoform X3 [Benincasa hispida]) HSP 1 Score: 189.5 bits (480), Expect = 2.0e-44 Identity = 102/161 (63.35%), Postives = 110/161 (68.32%), Query Frame = 0
BLAST of Lcy06g016180 vs. NCBI nr
Match: XP_038898894.1 (uncharacterized protein LOC120086352 isoform X2 [Benincasa hispida]) HSP 1 Score: 189.5 bits (480), Expect = 2.0e-44 Identity = 102/161 (63.35%), Postives = 110/161 (68.32%), Query Frame = 0
BLAST of Lcy06g016180 vs. TAIR 10
Match: AT5G48830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 8.3e-12 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0
BLAST of Lcy06g016180 vs. TAIR 10
Match: AT5G48830.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. ) HSP 1 Score: 67.8 bits (164), Expect = 8.3e-12 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|