Lcy06g016080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g016080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger protein
Location	Chr06: 36186052 .. 36186735 (-)
RNA-Seq Expression	Lcy06g016080
Synteny	Lcy06g016080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCTCTGACAAGTCCAATGGCGGCTCTGATTCCGAACTTAACTTGCTAAACTCTTTCAAGGATAACGCTTCGGAATCGAATCCAGAACCGAGGACGGAGACGGAGAAAGAGGCCGAAAACCGGGTTTTTTACTGCAAGTTTTGCAGTAGGAAGTTCTCGAATCTGCAGGCTTTGGGGGGCCATCAAAACGCCCATAAACGAGAAAGAGCAATCGCCAAAAGAGAGAAGGCGGCCGCCGCCGCCGCAGTGAGCTTCAGAACGGCCGTGGGCGCCGCCGCACGCAGTTCGGACGTTGGGTCTTTCTACCATCCGCATTATTCGGCAATGGGGGTTCAGTCTCTGCGGAACAAAGCCCTAGCGTTTCCGATTCGGCCGCAAACGACGATTCGTAAATCGAATCGGCCCGGAGTCGAACTCGGCGGCGCCTCTCCCGCCCATGGGTTTCGGTGGTGGTCGAGAGAACAATACATGGCGGCGGCGGCGGCGGCGGCACAGCAGTTACTGCCTGGAGGATTCTTGCAGGGCGTCAACATTGGCGGAAGCGTGAATTTGGCGGCAACTGGACTGAAATCCAAAGCTATGACGAATAGAAACGGTTCTTCTTCTTCTTCTTCTCTACAGAATTTTGCTGCTGATCAGTACAATATACATGGGCTTGATTTGTCGCTCAAACTTTGA

mRNA sequence

ATGTCTTCCTCTGACAAGTCCAATGGCGGCTCTGATTCCGAACTTAACTTGCTAAACTCTTTCAAGGATAACGCTTCGGAATCGAATCCAGAACCGAGGACGGAGACGGAGAAAGAGGCCGAAAACCGGGTTTTTTACTGCAAGTTTTGCAGTAGGAAGTTCTCGAATCTGCAGGCTTTGGGGGGCCATCAAAACGCCCATAAACGAGAAAGAGCAATCGCCAAAAGAGAGAAGGCGGCCGCCGCCGCCGCAGTGAGCTTCAGAACGGCCGTGGGCGCCGCCGCACGCAGTTCGGACGTTGGGTCTTTCTACCATCCGCATTATTCGGCAATGGGGGTTCAGTCTCTGCGGAACAAAGCCCTAGCGTTTCCGATTCGGCCGCAAACGACGATTCGTAAATCGAATCGGCCCGGAGTCGAACTCGGCGGCGCCTCTCCCGCCCATGGGTTTCGGTGGTGGTCGAGAGAACAATACATGGCGGCGGCGGCGGCGGCGGCACAGCAGTTACTGCCTGGAGGATTCTTGCAGGGCGTCAACATTGGCGGAAGCGTGAATTTGGCGGCAACTGGACTGAAATCCAAAGCTATGACGAATAGAAACGGTTCTTCTTCTTCTTCTTCTCTACAGAATTTTGCTGCTGATCAGTACAATATACATGGGCTTGATTTGTCGCTCAAACTTTGA

Coding sequence (CDS)

ATGTCTTCCTCTGACAAGTCCAATGGCGGCTCTGATTCCGAACTTAACTTGCTAAACTCTTTCAAGGATAACGCTTCGGAATCGAATCCAGAACCGAGGACGGAGACGGAGAAAGAGGCCGAAAACCGGGTTTTTTACTGCAAGTTTTGCAGTAGGAAGTTCTCGAATCTGCAGGCTTTGGGGGGCCATCAAAACGCCCATAAACGAGAAAGAGCAATCGCCAAAAGAGAGAAGGCGGCCGCCGCCGCCGCAGTGAGCTTCAGAACGGCCGTGGGCGCCGCCGCACGCAGTTCGGACGTTGGGTCTTTCTACCATCCGCATTATTCGGCAATGGGGGTTCAGTCTCTGCGGAACAAAGCCCTAGCGTTTCCGATTCGGCCGCAAACGACGATTCGTAAATCGAATCGGCCCGGAGTCGAACTCGGCGGCGCCTCTCCCGCCCATGGGTTTCGGTGGTGGTCGAGAGAACAATACATGGCGGCGGCGGCGGCGGCGGCACAGCAGTTACTGCCTGGAGGATTCTTGCAGGGCGTCAACATTGGCGGAAGCGTGAATTTGGCGGCAACTGGACTGAAATCCAAAGCTATGACGAATAGAAACGGTTCTTCTTCTTCTTCTTCTCTACAGAATTTTGCTGCTGATCAGTACAATATACATGGGCTTGATTTGTCGCTCAAACTTTGA

Protein sequence

MSSSDKSNGGSDSELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQNAHKRERAIAKREKAAAAAAVSFRTAVGAAARSSDVGSFYHPHYSAMGVQSLRNKALAFPIRPQTTIRKSNRPGVELGGASPAHGFRWWSREQYMAAAAAAAQQLLPGGFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL

Homology

[Close]

BLAST of Lcy06g016080 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 8.2e-11
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 11 SDSELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQNAHKRE 70
          + SELNL++SFK  +S S    + + E+ A+ RVF C +C RKF + QALGGHQNAHKRE
Sbjct: 35 TSSELNLIDSFK-TSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRE 94

Query: 71 RAIAKR 77
          R +AKR
Sbjct: 95 RTLAKR 99

[Close]

BLAST of Lcy06g016080 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 11  SDSELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQNAHKRE 70
           S  ELNL++   D  S  N     E+    E ++F C +C R F + QALGGHQNAHKRE
Sbjct: 32  SSHELNLIDCIDDTTSIVN-----ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRE 91

Query: 71  RAIAKREKAAAAAAVSF 88
           R +AKR +  AA+A +F
Sbjct: 92  RTLAKRGQRMAASASAF 103

[Close]

BLAST of Lcy06g016080 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-08
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNASE-SNPEPRTETEKEAENRVFYCKFCSRKFSNLQA 60
           +S ++ +N   D E + L     + SE SNPE + + +     RVF C +C RKF + QA
Sbjct: 40  LSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQA 99

Query: 61  LGGHQNAHKRERAIAKREKAAAAAAV 86
           LGGHQNAHKRER +AKR      A V
Sbjct: 100 LGGHQNAHKRERTLAKRAMRMGLAGV 125

[Close]

BLAST of Lcy06g016080 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 32/58 (55.17%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 27 ESNPEPRTETEKEAEN----RVFYCKFCSRKFSNLQALGGHQNAHKRERAIAKREKAA 81
          E   +P  E  K  EN    R+F C FCSRKF + QALGGHQNAHK+ER  A+R K A
Sbjct: 13 EEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

[Close]

BLAST of Lcy06g016080 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0


Query: 14 ELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQNAHKRERAI 73
          +L L ++F D+           T+ EA  RVF C +C RKF + QALGGHQNAHKRER +
Sbjct: 36 DLKLNDTFNDDTK--------STKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTM 90

Query: 74 AKR 77
          AKR
Sbjct: 96 AKR 90

[Close]

BLAST of Lcy06g016080 vs. ExPASy TrEMBL
Match: A0A0A0LBM7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53
Identity = 138/235 (58.72%), Postives = 157/235 (66.81%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNL-LNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQA 60
           MSSSDK     D   N   +S K   SE   +P TET+ + E RVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERAIAKREKAAAAAAVSFRTAVGAAARSSD----VGSFYHPHYSAMGVQS 120
           LGGHQNAHKRER IAKREKAAAAAA        A  R++D    +GSFYHP+YSAM +  
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAA-------AAGGRTTDAFDSIGSFYHPYYSAMAIHC 120

Query: 121 LRNKALAFPIRPQTTIRKSNRPGVELGG--ASPAHGFRWWSREQYMAAAAAA-AQQLLPG 180
           LRNK+   PIRPQ+ IRK +R  VELGG   + A+G+RWW REQY+AAA  A  QQ+  G
Sbjct: 121 LRNKSPGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180

Query: 181 GFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL 228
           G LQGVN          G  S AM NRN SSSSSS Q F ADQY ++GLDLSLKL
Sbjct: 181 GLLQGVN---------NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of Lcy06g016080 vs. ExPASy TrEMBL
Match: A0A6J1F842 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.4e-53
Identity = 141/231 (61.04%), Postives = 157/231 (67.97%), Query Frame = 0


Query: 10  GSDSELNLLNSFK-----DNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQ 69
           GS+ ELNL +SFK         E+     TET  + E RVFYCKFCSRKFSNLQALGGHQ
Sbjct: 9   GSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSNLQALGGHQ 68

Query: 70  NAHKRERAIAKREK--AAAAAAVSFRTAVGAAARSS------DVGSFYHPHYSAMGVQSL 129
           NAHKRER IAKREK  AAAAAA+SFRT   AAA ++       +GSFYHP+YSAM + +L
Sbjct: 69  NAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYYSAMAIHAL 128

Query: 130 RNKALAFPIRPQTTIRKSNRPGVELGGASPAHGFRWWSREQYMAAAAAAAQQLLPGGFLQ 189
           RNKAL FPIRP   IRK  RP       + AHG RWW REQYM    AAAQQL  GG  Q
Sbjct: 129 RNKALGFPIRP--PIRKPTRP------QAVAHGCRWWPREQYM----AAAQQLHFGGLWQ 188

Query: 190 GVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL 228
             N GG  NLA T L+S AM +RN +SSSS  Q F ADQYNIHGLDL+LKL
Sbjct: 189 AANNGGRENLATTELESIAMASRNATSSSS--QIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of Lcy06g016080 vs. ExPASy TrEMBL
Match: A0A5D3DPN0 (Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006570 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49
Identity = 136/241 (56.43%), Postives = 158/241 (65.56%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQAL 60
           MSSSDKSN  SD E N    +  ++ + + +P TE + + E RVFYCKFCSR FSNLQAL
Sbjct: 1   MSSSDKSN-ASDHERN----YNQDSFKESEQPETEAKAKEETRVFYCKFCSRNFSNLQAL 60

Query: 61  GGHQNAHKRERAIAKREKAAAAAAVSFRTAVGAAARSSDV----GSFYHPHYSAMGVQSL 120
           GGHQNAHKRER IAKREKAAAAAA        A  R++DV    GSFYHP+YS M + SL
Sbjct: 61  GGHQNAHKRERDIAKREKAAAAAA-------AAGGRTTDVFDSIGSFYHPYYSVMAIHSL 120

Query: 121 RNKALAFPIRPQTTIRKSNRPGVELGG---------ASPAHGFRWWSREQYMAA-AAAAA 180
           RNK+  FPIRPQ+ IRK +R  VEL G         A+ A+G+RWW REQYMAA AAA  
Sbjct: 121 RNKSPGFPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQ 180

Query: 181 QQLLPGGFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLK 228
           QQ+  GG LQG N          G +S AM N N SSSSS  Q F ADQ  ++GLDLSLK
Sbjct: 181 QQIQSGGLLQGFN---------NGFESIAMENINASSSSSP-QIFGADQCIVNGLDLSLK 219

[Close]

BLAST of Lcy06g016080 vs. ExPASy TrEMBL
Match: A0A6J1J773 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481989 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49
Identity = 143/236 (60.59%), Postives = 160/236 (67.80%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNAS--ESNPEPRTETEKEAENRVFYCKFCSRKFSNLQ 60
           M+SS +S  GS  ELNL +SFK      ++      E   + E RVFYCKFCSRKFSNLQ
Sbjct: 1   MASSVESE-GSKVELNLQHSFKAEPGFFKARTVMGMEMRTKKETRVFYCKFCSRKFSNLQ 60

Query: 61  ALGGHQNAHKRERAIAKREK-AAAAAAVSFRTAVGA--AARSSD----VGSFYHPHYSAM 120
           ALGGHQNAHKRER IAKREK AAAAAA+SFRT   A  AA S+D    +GSFY+P+YSAM
Sbjct: 61  ALGGHQNAHKRERDIAKREKAAAAAAAMSFRTTTTAASAATSTDAFDSIGSFYYPYYSAM 120

Query: 121 GVQSLRNKALAFPIRPQTTIRKSNRPGVELGGASPAHGFRWWSREQYMAAAAAAAQQLLP 180
            + SLRNKAL FPIRPQ+TIRK  RP       + AHG RWW REQYM   AAAAQQL  
Sbjct: 121 AIHSLRNKALGFPIRPQSTIRKPTRP------QAVAHGCRWWPREQYM---AAAAQQL-- 180

Query: 181 GGFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL 228
                     G  NLAAT L+S AM +RN SSSS   Q F ADQYNIHGLDL+LKL
Sbjct: 181 --------HFGRENLAATELESIAMASRNASSSS---QIFGADQYNIHGLDLTLKL 213

[Close]

BLAST of Lcy06g016080 vs. ExPASy TrEMBL
Match: E5GBP2 (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49
Identity = 136/241 (56.43%), Postives = 158/241 (65.56%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQAL 60
           MSSSDKSN  SD E N    +  ++ + + +P TE + + E RVFYCKFCSR FSNLQAL
Sbjct: 1   MSSSDKSN-ASDHERN----YNQDSFKESEQPETEAKAKEETRVFYCKFCSRNFSNLQAL 60

Query: 61  GGHQNAHKRERAIAKREKAAAAAAVSFRTAVGAAARSSDV----GSFYHPHYSAMGVQSL 120
           GGHQNAHKRER IAKREKAAAAAA        A  R++DV    GSFYHP+YS M + SL
Sbjct: 61  GGHQNAHKRERDIAKREKAAAAAA-------AAGGRTTDVFDSIGSFYHPYYSVMAIHSL 120

Query: 121 RNKALAFPIRPQTTIRKSNRPGVELGG---------ASPAHGFRWWSREQYMAA-AAAAA 180
           RNK+  FPIRPQ+ IRK +R  VEL G         A+ A+G+RWW REQYMAA AAA  
Sbjct: 121 RNKSPGFPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQ 180

Query: 181 QQLLPGGFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLK 228
           QQ+  GG LQG N          G +S AM N N SSSSS  Q F ADQ  ++GLDLSLK
Sbjct: 181 QQIQSGGLLQGFN---------NGFESIAMENINASSSSSP-QIFGADQCIVNGLDLSLK 219

[Close]

BLAST of Lcy06g016080 vs. NCBI nr
Match: XP_023528967.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 6.2e-56
Identity = 154/239 (64.44%), Postives = 168/239 (70.29%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNASESNPEP-----RTETEKEAENRVFYCKFCSRKFS 60
           M+SS KS  GS+ ELNL +SFK   +E   E       TET  + E RVFYCKFCSRKFS
Sbjct: 1   MASSGKSE-GSEVELNLQHSFKVLKAEPGFEEVGTAMGTETRTKRETRVFYCKFCSRKFS 60

Query: 61  NLQALGGHQNAHKRERAIAKREK--AAAAAAVSFRTAVGAAARSS-----DVGSFYHPHY 120
           NLQALGGHQNAHKRER IAKREK  AAAAAA+SFRT   AAA +S      +GSFYHP+Y
Sbjct: 61  NLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTTAAAATSTDAFDSIGSFYHPYY 120

Query: 121 SAMGVQSLRNKALAFPIRPQTTIRKSNRPGVELGGASPAHGFRWWSREQYMAAAAAAAQQ 180
           SAM +QSLRNKAL FPIRP   IRK  R        + AHG RWW REQYM  AAAAAQQ
Sbjct: 121 SAMAIQSLRNKALGFPIRP--PIRKPTRL------QAVAHGCRWWPREQYM--AAAAAQQ 180

Query: 181 LLPGGFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL 228
           L  GG  Q  N GG  NLAAT L+S AM +RN SSSSSS Q F ADQYNIHGLDL+LKL
Sbjct: 181 LHFGGLWQAANNGGRENLAATELESIAMASRNASSSSSS-QIFGADQYNIHGLDLTLKL 227

[Close]

BLAST of Lcy06g016080 vs. NCBI nr
Match: XP_004136633.1 (zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001317 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 2.2e-53
Identity = 138/235 (58.72%), Postives = 157/235 (66.81%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNL-LNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQA 60
           MSSSDK     D   N   +S K   SE   +P TET+ + E RVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERAIAKREKAAAAAAVSFRTAVGAAARSSD----VGSFYHPHYSAMGVQS 120
           LGGHQNAHKRER IAKREKAAAAAA        A  R++D    +GSFYHP+YSAM +  
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAA-------AAGGRTTDAFDSIGSFYHPYYSAMAIHC 120

Query: 121 LRNKALAFPIRPQTTIRKSNRPGVELGG--ASPAHGFRWWSREQYMAAAAAA-AQQLLPG 180
           LRNK+   PIRPQ+ IRK +R  VELGG   + A+G+RWW REQY+AAA  A  QQ+  G
Sbjct: 121 LRNKSPGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180

Query: 181 GFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL 228
           G LQGVN          G  S AM NRN SSSSSS Q F ADQY ++GLDLSLKL
Sbjct: 181 GLLQGVN---------NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of Lcy06g016080 vs. NCBI nr
Match: XP_022934598.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-53
Identity = 141/231 (61.04%), Postives = 157/231 (67.97%), Query Frame = 0


Query: 10  GSDSELNLLNSFK-----DNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQ 69
           GS+ ELNL +SFK         E+     TET  + E RVFYCKFCSRKFSNLQALGGHQ
Sbjct: 9   GSEVELNLKHSFKVLKAEPGFEEAGTAMGTETRTKRETRVFYCKFCSRKFSNLQALGGHQ 68

Query: 70  NAHKRERAIAKREK--AAAAAAVSFRTAVGAAARSS------DVGSFYHPHYSAMGVQSL 129
           NAHKRER IAKREK  AAAAAA+SFRT   AAA ++       +GSFYHP+YSAM + +L
Sbjct: 69  NAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATTTGAFDSIGSFYHPYYSAMAIHAL 128

Query: 130 RNKALAFPIRPQTTIRKSNRPGVELGGASPAHGFRWWSREQYMAAAAAAAQQLLPGGFLQ 189
           RNKAL FPIRP   IRK  RP       + AHG RWW REQYM    AAAQQL  GG  Q
Sbjct: 129 RNKALGFPIRP--PIRKPTRP------QAVAHGCRWWPREQYM----AAAQQLHFGGLWQ 188

Query: 190 GVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL 228
             N GG  NLA T L+S AM +RN +SSSS  Q F ADQYNIHGLDL+LKL
Sbjct: 189 AANNGGRENLATTELESIAMASRNATSSSS--QIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of Lcy06g016080 vs. NCBI nr
Match: KAG7017633.1 (Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.4 bits (555), Expect = 6.4e-53
Identity = 149/240 (62.08%), Postives = 164/240 (68.33%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNASESNPEP-----RTETEKEAENRVFYCKFCSRKFS 60
           M+SS +   GS+ ELNL +SFK   +E   E       TET  + E RVFYCKFCSRKFS
Sbjct: 1   MASSGECE-GSEVELNLQHSFKVLKAEPGFEEVGTAMGTETRTKRETRVFYCKFCSRKFS 60

Query: 61  NLQALGGHQNAHKRERAIAKREK--AAAAAAVSFR--TAVGAAARSSD----VGSFYHPH 120
           NLQALGGHQNAHKRER IAKREK  AAAAAA+SFR  TA  AAA S+D    +GSFYHP+
Sbjct: 61  NLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAATSTDAFDSIGSFYHPY 120

Query: 121 YSAMGVQSLRNKALAFPIRPQTTIRKSNRPGVELGGASPAHGFRWWSREQYMAAAAAAAQ 180
           YSAM + SLRNKAL FPIRP   IRK  RP       + AHG RWW REQYM   AAAAQ
Sbjct: 121 YSAMAIHSLRNKALGFPIRP--PIRKPTRP------QAVAHGCRWWPREQYM---AAAAQ 180

Query: 181 QLLPGGFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLKL 228
           QL  GG  Q  N GG  N AAT L+S AM +RN SSS    Q F ADQYNIHGLDL+LKL
Sbjct: 181 QLHFGGLWQAANNGGRENSAATDLESIAMASRNASSS----QIFGADQYNIHGLDLTLKL 224

[Close]

BLAST of Lcy06g016080 vs. NCBI nr
Match: KAG6580877.1 (Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.0 bits (554), Expect = 8.3e-53
Identity = 149/241 (61.83%), Postives = 164/241 (68.05%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNASESNPEP-----RTETEKEAENRVFYCKFCSRKFS 60
           M+SS +   GS+ ELNL +SFK   +E   E       TET  + E RVFYCKFCSRKFS
Sbjct: 1   MASSGECE-GSEVELNLQHSFKVLKAEPGFEEVGTAMGTETRTKRETRVFYCKFCSRKFS 60

Query: 61  NLQALGGHQNAHKRERAIAKREK--AAAAAAVSFRT---AVGAAARSSD----VGSFYHP 120
           NLQALGGHQNAHKRER IAKREK  AAAAAA+SFRT   A  AAA S+D    +GSFYHP
Sbjct: 61  NLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTTAAAAAAATSTDAFDSIGSFYHP 120

Query: 121 HYSAMGVQSLRNKALAFPIRPQTTIRKSNRPGVELGGASPAHGFRWWSREQYMAAAAAAA 180
           +YSAM + SLRNKAL FPIRP   IRK  RP       + AHG RWW REQYM   AAAA
Sbjct: 121 YYSAMAIHSLRNKALGFPIRP--PIRKPTRP------QAVAHGCRWWPREQYM---AAAA 180

Query: 181 QQLLPGGFLQGVNIGGSVNLAATGLKSKAMTNRNGSSSSSSLQNFAADQYNIHGLDLSLK 228
           QQL  GG  Q  N GG  N AAT L+S AM +RN SSS    Q F ADQYNIHGLDL+LK
Sbjct: 181 QQLHFGGLWQAANNGGRENSAATDLESIAMASRNASSS----QIFGADQYNIHGLDLTLK 225

[Close]

BLAST of Lcy06g016080 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 68.9 bits (167), Expect = 5.8e-12
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 11 SDSELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQNAHKRE 70
          + SELNL++SFK  +S S    + + E+ A+ RVF C +C RKF + QALGGHQNAHKRE
Sbjct: 35 TSSELNLIDSFK-TSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRE 94

Query: 71 RAIAKR 77
          R +AKR
Sbjct: 95 RTLAKR 99

[Close]

BLAST of Lcy06g016080 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-10
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 34  TETEKEAENRVFYCKFCSRKFSNLQALGGHQNAHKRERAIAKREK 79
           + T  EA+ RVF C FC ++FS  QALGGHQNAHK+ER++AKR K
Sbjct: 56  SSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRK 100

[Close]

BLAST of Lcy06g016080 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 11  SDSELNLLNSFKDNASESNPEPRTETEKEAENRVFYCKFCSRKFSNLQALGGHQNAHKRE 70
           S  ELNL++   D  S  N     E+    E ++F C +C R F + QALGGHQNAHKRE
Sbjct: 32  SSHELNLIDCIDDTTSIVN-----ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRE 91

Query: 71  RAIAKREKAAAAAAVSF 88
           R +AKR +  AA+A +F
Sbjct: 92  RTLAKRGQRMAASASAF 103

[Close]

BLAST of Lcy06g016080 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-09
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 1   MSSSDKSNGGSDSELNLLNSFKDNASE-SNPEPRTETEKEAENRVFYCKFCSRKFSNLQA 60
           +S ++ +N   D E + L     + SE SNPE + + +     RVF C +C RKF + QA
Sbjct: 40  LSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQA 99

Query: 61  LGGHQNAHKRERAIAKREKAAAAAAV 86
           LGGHQNAHKRER +AKR      A V
Sbjct: 100 LGGHQNAHKRERTLAKRAMRMGLAGV 125

[Close]

BLAST of Lcy06g016080 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-09
Identity = 32/58 (55.17%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 27 ESNPEPRTETEKEAEN----RVFYCKFCSRKFSNLQALGGHQNAHKRERAIAKREKAA 81
          E   +P  E  K  EN    R+F C FCSRKF + QALGGHQNAHK+ER  A+R K A
Sbjct: 13 EEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

The following BLAST results are available for this feature:

BLAST of Lcy06g016080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	8.2e-11	56.06	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	2.2e-08	46.75	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	3.8e-08	44.19	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q9FKA9	1.1e-07	55.17	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39266	1.4e-07	50.79	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]

BLAST of Lcy06g016080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBM7	1.1e-53	58.72	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 P...	[more]
A0A6J1F842	1.4e-53	61.04	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV...	[more]
A0A5D3DPN0	2.1e-49	56.43	Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1J773	2.1e-49	60.59	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481989 PE=4 SV=1	[more]
E5GBP2	2.1e-49	56.43	Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Lcy06g016080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528967.1	6.2e-56	64.44	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_004136633.1	2.2e-53	58.72	zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001...	[more]
XP_022934598.1	2.9e-53	61.04	zinc finger protein 1-like [Cucurbita moschata]	[more]
KAG7017633.1	6.4e-53	62.08	Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6580877.1	8.3e-53	61.83	Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy06g016080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80730.1	5.8e-12	56.06	zinc-finger protein 1	[more]
AT5G01860.1	9.3e-10	62.22	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.6e-09	46.75	zinc finger protein 3	[more]
AT1G66140.1	2.7e-09	44.19	zinc finger protein 4	[more]
AT5G48890.1	7.9e-09	55.17	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 27..96 e-value: 4.6E-7 score: 31.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 4..227
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 47..67
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 45..72 score: 11.19825
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 42..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g016080.1	Lcy06g016080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway