Lcy06g015550 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g015550
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	S-acyltransferase
Location	Chr06: 33983920 .. 33984312 (+)
RNA-Seq Expression	Lcy06g015550
Synteny	Lcy06g015550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTCGGCGCCTCTCTTGAAGATGCGCGCGCGATATGAGAAAAAAGAGCCTATTGGTTGGGAGGAACCAATGAAAAGCCAGGGTAGAGCCTCTCCACCGGCCCAAGCGAAGATCGGCACTCGAAGGCTTGAGGAGCAGCCCGCAAAAGGGAAAGCCGTGGAGACGGCAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTACAGCAGACCGGGAGGTTACAATTCCTGTTTTCCTGTTTCAATTTCCGGGAGTGAATGTAGGAAGTTCAGACGGTGGATCAGGTGTGAAGATTCAACCAAAGACGTCTTGGGGATCGGCAATAGCTAAGCATTGTGGCCATCACAGTTCAAGCTACGTATGGCTGGCGCACAACCTACGGGCTTCTTAG

mRNA sequence

ATGTACTCGGCGCCTCTCTTGAAGATGCGCGCGCGATATGAGAAAAAAGAGCCTATTGGTTGGGAGGAACCAATGAAAAGCCAGGGTAGAGCCTCTCCACCGGCCCAAGCGAAGATCGGCACTCGAAGGCTTGAGGAGCAGCCCGCAAAAGGGAAAGCCGTGGAGACGGCAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTACAGCAGACCGGGAGGTTACAATTCCTGTTTTCCTGTTTCAATTTCCGGGAGTGAATGTAGGAAGTTCAGACGGTGGATCAGGTGTGAAGATTCAACCAAAGACGTCTTGGGGATCGGCAATAGCTAAGCATTGTGGCCATCACAGTTCAAGCTACGTATGGCTGGCGCACAACCTACGGGCTTCTTAG

Coding sequence (CDS)

ATGTACTCGGCGCCTCTCTTGAAGATGCGCGCGCGATATGAGAAAAAAGAGCCTATTGGTTGGGAGGAACCAATGAAAAGCCAGGGTAGAGCCTCTCCACCGGCCCAAGCGAAGATCGGCACTCGAAGGCTTGAGGAGCAGCCCGCAAAAGGGAAAGCCGTGGAGACGGCAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTACAGCAGACCGGGAGGTTACAATTCCTGTTTTCCTGTTTCAATTTCCGGGAGTGAATGTAGGAAGTTCAGACGGTGGATCAGGTGTGAAGATTCAACCAAAGACGTCTTGGGGATCGGCAATAGCTAAGCATTGTGGCCATCACAGTTCAAGCTACGTATGGCTGGCGCACAACCTACGGGCTTCTTAG

Protein sequence

MYSAPLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETADSPVRHTVRLTTADREVTIPVFLFQFPGVNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSSSYVWLAHNLRAS

Homology

[Close]

BLAST of Lcy06g015550 vs. ExPASy TrEMBL
Match: A0A2J6LJS6 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X96640 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.4e-52
Identity = 111/132 (84.09%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMKSQGRAS PAQAKIGTRRLEEQP KGKAVETAD
Sbjct: 1   MYSGPPPIAGRCARYDKGP---WEKPMKSQGRASEPAQAKIGTRRLEEQPEKGKAVETAD 60

Query: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSS 120
           SPVRHTVRLTTADREVTIPVFLFQFPGVNVGS+DGGSGV IQPK SWGSAIAKHCGHHSS
Sbjct: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSADGGSGVNIQPKASWGSAIAKHCGHHSS 120

Query: 121 SYVWLAHNLRAS 131
           SYVWLA+NLRAS
Sbjct: 121 SYVWLAYNLRAS 129

[Close]

BLAST of Lcy06g015550 vs. ExPASy TrEMBL
Match: A0A2J6LC21 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X111720 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 108/132 (81.82%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMKSQGRAS PAQAKIGTRRLEEQP KGKAVETAD
Sbjct: 1   MYSGPPPIAGRCARYDKGP---WEKPMKSQGRASEPAQAKIGTRRLEEQPEKGKAVETAD 60

Query: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSS 120
           SPVRHTVRLTTADREVTIPVFLFQFPGVNVGS+DGGSGV IQPK SWGSAIAKH GHHSS
Sbjct: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSADGGSGVNIQPKASWGSAIAKHYGHHSS 120

Query: 121 SYVWLAHNLRAS 131
            YVWLA+NL+AS
Sbjct: 121 IYVWLAYNLQAS 129

[Close]

BLAST of Lcy06g015550 vs. ExPASy TrEMBL
Match: A0A2J6JHW4 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X16661 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.9e-49
Identity = 105/132 (79.55%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMK+QGRAS  AQAKIGTRRLEEQP KGKA+ET D
Sbjct: 1   MYSGPPPIAGRCARYDKGP---WEKPMKNQGRASELAQAKIGTRRLEEQPEKGKAMETVD 60

Query: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSS 120
           SPVRHT+RLTTA+REVTIPVFLFQFPGVNVGS+DGGSGV IQPK SWGSAIAKHCGHHSS
Sbjct: 61  SPVRHTMRLTTAEREVTIPVFLFQFPGVNVGSADGGSGVNIQPKASWGSAIAKHCGHHSS 120

Query: 121 SYVWLAHNLRAS 131
           SYVWLA+NLRAS
Sbjct: 121 SYVWLAYNLRAS 129

[Close]

BLAST of Lcy06g015550 vs. ExPASy TrEMBL
Match: A0A2J6KAW2 (S-acyltransferase OS=Lactuca sativa OX=4236 GN=LSAT_7X43100 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.4e-18
Identity = 57/76 (75.00%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMKSQGRAS PAQAKIGTRRLEEQP KGKAVETAD
Sbjct: 34  MYSGPPPIAGRCARYDKGP---WEKPMKSQGRASEPAQAKIGTRRLEEQPEKGKAVETAD 93

Query: 61  SPVRHTVRLTTADREV 75
           SPVRHTVRLTTAD+E+
Sbjct: 94  SPVRHTVRLTTADQEM 106

[Close]

BLAST of Lcy06g015550 vs. ExPASy TrEMBL
Match: A0A0D2PZN2 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G162300 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.0e-13
Identity = 41/52 (78.85%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 83   FPG----VNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSSSYVWLAHNLRAS 131
            FPG    +NVGS+DGGSGV IQPK SW S IAKHCGHHSSSYVWLA+NLRAS
Sbjct: 1158 FPGPPRLLNVGSADGGSGVNIQPKASWRSTIAKHCGHHSSSYVWLAYNLRAS 1209

[Close]

BLAST of Lcy06g015550 vs. NCBI nr
Match: PLY87587.1 (hypothetical protein LSAT_8X78121 [Lactuca sativa] >PLY94325.1 hypothetical protein LSAT_7X96640 [Lactuca sativa])

HSP 1 Score: 213.8 bits (543), Expect = 9.0e-52
Identity = 111/132 (84.09%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMKSQGRAS PAQAKIGTRRLEEQP KGKAVETAD
Sbjct: 1   MYSGPPPIAGRCARYDKGP---WEKPMKSQGRASEPAQAKIGTRRLEEQPEKGKAVETAD 60

Query: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSS 120
           SPVRHTVRLTTADREVTIPVFLFQFPGVNVGS+DGGSGV IQPK SWGSAIAKHCGHHSS
Sbjct: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSADGGSGVNIQPKASWGSAIAKHCGHHSS 120

Query: 121 SYVWLAHNLRAS 131
           SYVWLA+NLRAS
Sbjct: 121 SYVWLAYNLRAS 129

[Close]

BLAST of Lcy06g015550 vs. NCBI nr
Match: PLY84857.1 (hypothetical protein LSAT_8X111720 [Lactuca sativa])

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 108/132 (81.82%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMKSQGRAS PAQAKIGTRRLEEQP KGKAVETAD
Sbjct: 1   MYSGPPPIAGRCARYDKGP---WEKPMKSQGRASEPAQAKIGTRRLEEQPEKGKAVETAD 60

Query: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSS 120
           SPVRHTVRLTTADREVTIPVFLFQFPGVNVGS+DGGSGV IQPK SWGSAIAKH GHHSS
Sbjct: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSADGGSGVNIQPKASWGSAIAKHYGHHSS 120

Query: 121 SYVWLAHNLRAS 131
            YVWLA+NL+AS
Sbjct: 121 IYVWLAYNLQAS 129

[Close]

BLAST of Lcy06g015550 vs. NCBI nr
Match: PLY62418.1 (hypothetical protein LSAT_5X16661 [Lactuca sativa])

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48
Identity = 105/132 (79.55%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMK+QGRAS  AQAKIGTRRLEEQP KGKA+ET D
Sbjct: 1   MYSGPPPIAGRCARYDKGP---WEKPMKNQGRASELAQAKIGTRRLEEQPEKGKAMETVD 60

Query: 61  SPVRHTVRLTTADREVTIPVFLFQFPGVNVGSSDGGSGVKIQPKTSWGSAIAKHCGHHSS 120
           SPVRHT+RLTTA+REVTIPVFLFQFPGVNVGS+DGGSGV IQPK SWGSAIAKHCGHHSS
Sbjct: 61  SPVRHTMRLTTAEREVTIPVFLFQFPGVNVGSADGGSGVNIQPKASWGSAIAKHCGHHSS 120

Query: 121 SYVWLAHNLRAS 131
           SYVWLA+NLRAS
Sbjct: 121 SYVWLAYNLRAS 129

[Close]

BLAST of Lcy06g015550 vs. NCBI nr
Match: XP_023735848.2 (protein S-acyltransferase 24 [Lactuca sativa])

HSP 1 Score: 105.5 bits (262), Expect = 3.4e-19
Identity = 55/61 (90.16%), Postives = 57/61 (93.44%), Query Frame = 0


Query: 25 MKSQGRASPPAQAKIGTRRLEEQPAKGKAVETADSPVRHTVRLTTADREVTIPVFLFQFP 84
          MKSQGRAS PAQAKIGTRRLEEQP KGKAVETADSPVRHTVRLTTAD+EVTIPVFLF+  
Sbjct: 1  MKSQGRASEPAQAKIGTRRLEEQPEKGKAVETADSPVRHTVRLTTADQEVTIPVFLFRPS 60

Query: 85 G 86
          G
Sbjct: 61 G 61

[Close]

BLAST of Lcy06g015550 vs. NCBI nr
Match: PLY72224.1 (hypothetical protein LSAT_7X43100 [Lactuca sativa])

HSP 1 Score: 101.7 bits (252), Expect = 5.0e-18
Identity = 57/76 (75.00%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 1   MYSA--PLLKMRARYEKKEPIGWEEPMKSQGRASPPAQAKIGTRRLEEQPAKGKAVETAD 60
           MYS   P+    ARY+K     WE+PMKSQGRAS PAQAKIGTRRLEEQP KGKAVETAD
Sbjct: 34  MYSGPPPIAGRCARYDKGP---WEKPMKSQGRASEPAQAKIGTRRLEEQPEKGKAVETAD 93

Query: 61  SPVRHTVRLTTADREV 75
           SPVRHTVRLTTAD+E+
Sbjct: 94  SPVRHTVRLTTADQEM 106

The following BLAST results are available for this feature:

BLAST of Lcy06g015550 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g015550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2J6LJS6	4.4e-52	84.09	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X96640 PE=4 SV=1	[more]
A0A2J6LC21	1.2e-49	81.82	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X111720 PE=4 SV=1	[more]
A0A2J6JHW4	5.9e-49	79.55	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X16661 PE=4 SV=1	[more]
A0A2J6KAW2	2.4e-18	75.00	S-acyltransferase OS=Lactuca sativa OX=4236 GN=LSAT_7X43100 PE=3 SV=1	[more]
A0A0D2PZN2	1.0e-13	78.85	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G162300 PE=4 ...	[more]

BLAST of Lcy06g015550 vs. NCBI nr


Match Name	E-value	Identity	Description
PLY87587.1	9.0e-52	84.09	hypothetical protein LSAT_8X78121 [Lactuca sativa] >PLY94325.1 hypothetical prot...	[more]
PLY84857.1	2.4e-49	81.82	hypothetical protein LSAT_8X111720 [Lactuca sativa]	[more]
PLY62418.1	1.2e-48	79.55	hypothetical protein LSAT_5X16661 [Lactuca sativa]	[more]
XP_023735848.2	3.4e-19	90.16	protein S-acyltransferase 24 [Lactuca sativa]	[more]
PLY72224.1	5.0e-18	75.00	hypothetical protein LSAT_7X43100 [Lactuca sativa]	[more]

BLAST of Lcy06g015550 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g015550.1	Lcy06g015550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0018345	protein palmitoylation
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0019706	protein-cysteine S-palmitoyltransferase activity