Lcy06g015450 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g015450
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr06: 33764015 .. 33767843 (+)
RNA-Seq Expression	Lcy06g015450
Synteny	Lcy06g015450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGTCCCAAGTCTGTCTCACAGAGAAGGGTTTTTAGGGTTTAAGAGCAACGTCTCTGCCACTTCTATTTCAATTCCCCTCGCTCTCCTTCGTCGTTCCCAATTCCTATTGTTGGAAGTCTGCTCTAAGTTCTTCACTGCTATTATCGTCTCACCATGTGGGCTCTTCGTAGAGCTTCCACTCCTCTTAGGTATGCTTCTCTTCGTTCATGATTCTTTTCGGCTGTTCTTCGTTGTGAACCTTTCTGCTTGTTTAGCTTACATTGTTAATTCGTTAATGCAAAAACTGGATACAGAAAGAGAACTATTCTTAATCTCATTTTTACTGTAAACTTTTGGATTCATTTCATGGGTATTGCTTTTCATAGACTAATATGTATCAGTAAGGTTCTTGCTTGCTTCTGATCGGGCTTCCGGTGCTCGTTAAAGAAGGAAATGAAGTAAAGAGTTCTGCGTGATTTGTTCTGTTCTTGTTGTTCCCTTCGCGTTCTATATCTGTTTTGTTCGTATTTAAGCTGAAATGTGAAGCTTCTTTTGGTTGAGGTTTGCTGTCTAATTCTTTTCTTTTTTTTTTCTCTTAAAGAATGCATTTCTGAAAATTTTAAATTTCTGGGTTTGAGATTCTATCTTCATAATTTATGATGCCATGTGCATTTTTGGGCTTTTGAGTTTCAAAGATAACGGTTGGGCTAAGGGGAGTTTTTTTTTTTTTTTTTTGTCCCTAAGGATGAGTTTTGGAGATGGTATGAGTGATGAAATTCAAATCAGTGTAGACCGTAGACATGGAAATTGGGATGCAAGAAGCTGTGATGTTGGGAAGAAAAGAAATTTCCATTCATTAAAAATTCTGAAATTTATACAATTTGGATATTCTTCTTTTGTCCAACTTCAAAACGTGAATATTTCTGCTGGCATGGCAGTTTCCTGAAATCCATCATTATCAATCATCTAAAAGATAGTTTTTGTACTATTTGCTTCTGTACACATATAATATATGCATGCACGTATATATTGTGGTGGGGAAGGTACAATACCTACAATTTTTCAGATTACTCTCTGTATTATCTTTGTGTTCTCTTTCTAGGAATCAAGGGTATGGAGTGAGAACTTCATATGTCCTTGGCAAACTAGAGATGCAGAATTCGTTGGAAGGAAATAGAGTTGTTTCCAGTACCACCCCTGCTATACCTGATAGATGCATTTCTTTTGTGAGAAATAACCTTGCAACATGGAAGTCCTCTGGCCTTTATATTAGTAGTCATGGTCTATCTTCACAAGCTGGTGCTGAGAACAGTGGAGAGGAAGACGACTTGGAAGATGGATTTTCTGAACTTGAAACACTTCCAAGCACTAGTTCACTTGAAGATAATAAAGCAGCTGATGAAAATGAAGAGGAATTAACCTCTGGATCAGAACTTGATAATGATGATGTTGATGATGGGATTCAAAATGAACTGGATTTACCAGAGGTTGAAACTGAACTTGCTGAAAAGATATCTACAAAAAGGGCTCCTTCAGAGCTGTTCAAGGCTATTTGGAGTGCTCCAGGTTTATCTGTTCCTAGTGCACTTGATAAGTGGGTCAGTGAAGGAAAAGAATTAAGCCGAGCTGATATCTCTCTGGCCATGCTCAATCTTCGTAGACGTCGAATGTTTGGGAAGGCTTTGCAGGTAAATTTACTTGATTTTACTCTACTTTTTCGAACAATGAAATTCATTCTTGTGGTTTTAGGTTTATAATTAATCTCATTTCTCTTGGGATTTGCAGAACTCTAAAGCTTATGTGGTTAGCAATGATCAGTCTTTAAAAAGTACCACAGAATCAATTGTAATGTGATCTAACAAACACAAAATGATTTCAATATGTGTTTGTTCATCAATATAAATTTAGGAGGCTGGTATCAATAAACCTGAGTATGTAGATCAATTCTTAAGAAGTACTGTTATCAAGTGCTTGTATAAAAATTGTCAATCTGGCCTGTAGCATTCAAGAGATAGTGCTAGAACCTCTTATAGAATTTTCAGTTGGTTTTGGTATTAGGTTGAGCAGTATGGAACTGCTTGATTTAGTATATATGGATTGCCATTTATTTATTGCGTTGGTCTTATCGAGTCATTATTGGTAGAAAAGAATTTCTTAGCTTCTGTATATGATTAGTATTTTCCCCTATTTGCTAGAGATTCTAATTCATCATTTCATGAACTCATCGCTGGCTTACTGTATGGGTTTCACAGTTTTCAGAGTGGTTGGAAGCTAGTGGACAACTCGATTTCATTGACAGAGATTATGCTTCTCGCCTTGACTTGATTGCAAAGGTACGGGGTCTCCATAAGGCAGAGAGTTATATTGCTAAAATCCCAAAATCCTTTCAGGGGGAGGTGATATACCGCACTCTTTTGGCAAACTGTGTGGTCGCCAACAATGTAAAAAAGGCAGAGGAAGTATTTAACAAAATGAAGGACCTTGAATTCCCAATCACAACATTTGCTTGCAACCAGTTGCTTCTTCTTTACAAGAGGCTTGACAAGAGGAAAATAGCCGATGTTTTGTTGTTGATGGAGAAAGAAAATGTCAAGCCTTCTCTGTTTACTTACAAAATTTTAATAGATGCTAAAGGCCTTTCAAATGACATGATAGGGATGGAACAAGTTGTTAATACAATGAAGGATGAAGGAATGGAACTTGATGTAACTACACTTTCCATATTAGCTAAGCACTATGCTTCAAGTGGGCTTAAAGACAAAGCCAAGGCCATTATGCAGGAGATGGAAGAGCTTAGCTCCAAAGATTCTCGATGGCCTTGCAGAATTTTACTTCCCCTTTATGGTGAACTACAAATGGAAGATGAAGTGAGGAGGGTCTGGAAGATATGCGAATCAAATCCTCGTATAGAAGAATGCATGGCTGCCATTGTTGCATGGGGAAAGCTGAAGAACGTCCCAGAAGCAGAGGAAATTTTTGATAGAGTTTTAAAAACATGGAAGAAACTTTCCTCAAAACAATATTCTACCATGTTGAAGGTCTATGCAGACAATAAAATGCTGATGAAGGGCAAGGATCTAGTCAAGCAGATGGCGGACAGCGGTTGCCGCATCGGTCCATTTACATGGGATGCAGTTGTGAAGCTCTATGTGGAAGCTGGGGAGGTAGAAAAAGCAGACTCTTTCTTGCAGAAGGCTGTCCAGAAAAACCAGATGAAGCCATTGTTTACCTCTTACATGATTATTATGGATCAGTACGCAAGGAGGGGTGACGTCCACAATGCAGAGAAAATGTTTCATAGGATGAGACTATCGGGTTACGTGGCTCGATTCAGCCAGTTTCAAACTCTGATACAGGCATACATTAATGCCAAGTCTCCAGCCTATGGTATGAAAGAGAGAATGAAGGCAGATAATGTATTTCCAAACAAAGCTATGGCAGGAAAATTAGCACAAATTGATGCATTCAGGAAGACAGCAGTGTCAGATTTGCTTGAATGAGGAATTTAACTTGATACTTTTGGAATGTATAAACTTCCCAGGTTTCAACTCTATTTTACAAAATCAAGTATTTGTTTGTTAATCAGATGGCTGCTCTTTGAAGTATGAAAGTATACCTGTTAGGACAGAACTTCAAAATTGGATCGTGCTGCACTTGTGTAATATTTGGTTTGTTCCATTACCCATTCTTACCTAGAACTGTGATTTTGCAGTAAACTCAAAATTGTTTGCTGTTATATGTATGCCACTTTAATTTTCACGATCACAGCTATTTAGGGTTTCTTTTTTTCCCTTAGGCTTAGGTGTGCCACTTGACGTTGATTTTGTGGAGAAAAAATGAGTCTGAT

mRNA sequence

GTTAGTCCCAAGTCTGTCTCACAGAGAAGGGTTTTTAGGGTTTAAGAGCAACGTCTCTGCCACTTCTATTTCAATTCCCCTCGCTCTCCTTCGTCGTTCCCAATTCCTATTGTTGGAAGTCTGCTCTAAGTTCTTCACTGCTATTATCGTCTCACCATGTGGGCTCTTCGTAGAGCTTCCACTCCTCTTAGGTATGCTTCTCTTCGTTCATGATTCTTTTCGGCTGTTCTTCGTTGTGAACCTTTCTGCTTGTTTAGCTTACATTGTTAATTCGTTAATGCAAAAACTGGATACAGAAAGAGAACTATTCTTAATCTCATTTTTACTGTAAACTTTTGGATTCATTTCATGGGTATTGCTTTTCATAGACTAATATGTATCAGTAAGGTTCTTGCTTGCTTCTGATCGGGCTTCCGGTGCTCGTTAAAGAAGGAAATGAAGTAAAGAGTTCTGCGTGATTTGTTCTGTTCTTGTTGTTCCCTTCGCGTTCTATATCTGTTTTGTTCGTATTTAAGCTGAAATGTGAAGCTTCTTTTGGTTGAGGTTTGCTGTCTAATTCTTTTCTTTTTTTTTTCTCTTAAAGAATGCATTTCTGAAAATTTTAAATTTCTGGGTTTGAGATTCTATCTTCATAATTTATGATGCCATGTGCATTTTTGGGCTTTTGAGTTTCAAAGATAACGGTTGGGCTAAGGGGAGTTTTTTTTTTTTTTTTTTGTCCCTAAGGATGAGTTTTGGAGATGGTATGAGTGATGAAATTCAAATCAGTGTAGACCGTAGACATGGAAATTGGGATGCAAGAAGCTGTGATGTTGGGAAGAAAAGAAATTTCCATTCATTAAAAATTCTGAAATTTATACAATTTGGATATTCTTCTTTTGTCCAACTTCAAAACGTGAATATTTCTGCTGGCATGGCAGTTTCCTGAAATCCATCATTATCAATCATCTAAAAGATAGTTTTTGTACTATTTGCTTCTGTACACATATAATATATGCATGCACGTATATATTGTGGTGGGGAAGGTACAATACCTACAATTTTTCAGATTACTCTCTGTATTATCTTTGTGTTCTCTTTCTAGGAATCAAGGGTATGGAGTGAGAACTTCATATGTCCTTGGCAAACTAGAGATGCAGAATTCGTTGGAAGGAAATAGAGTTGTTTCCAGTACCACCCCTGCTATACCTGATAGATGCATTTCTTTTGTGAGAAATAACCTTGCAACATGGAAGTCCTCTGGCCTTTATATTAGTAGTCATGGTCTATCTTCACAAGCTGGTGCTGAGAACAGTGGAGAGGAAGACGACTTGGAAGATGGATTTTCTGAACTTGAAACACTTCCAAGCACTAGTTCACTTGAAGATAATAAAGCAGCTGATGAAAATGAAGAGGAATTAACCTCTGGATCAGAACTTGATAATGATGATGTTGATGATGGGATTCAAAATGAACTGGATTTACCAGAGGTTGAAACTGAACTTGCTGAAAAGATATCTACAAAAAGGGCTCCTTCAGAGCTGTTCAAGGCTATTTGGAGTGCTCCAGGTTTATCTGTTCCTAGTGCACTTGATAAGTGGGTCAGTGAAGGAAAAGAATTAAGCCGAGCTGATATCTCTCTGGCCATGCTCAATCTTCGTAGACGTCGAATGTTTGGGAAGGCTTTGCAGTTTTCAGAGTGGTTGGAAGCTAGTGGACAACTCGATTTCATTGACAGAGATTATGCTTCTCGCCTTGACTTGATTGCAAAGGTACGGGGTCTCCATAAGGCAGAGAGTTATATTGCTAAAATCCCAAAATCCTTTCAGGGGGAGGTGATATACCGCACTCTTTTGGCAAACTGTGTGGTCGCCAACAATGTAAAAAAGGCAGAGGAAGTATTTAACAAAATGAAGGACCTTGAATTCCCAATCACAACATTTGCTTGCAACCAGTTGCTTCTTCTTTACAAGAGGCTTGACAAGAGGAAAATAGCCGATGTTTTGTTGTTGATGGAGAAAGAAAATGTCAAGCCTTCTCTGTTTACTTACAAAATTTTAATAGATGCTAAAGGCCTTTCAAATGACATGATAGGGATGGAACAAGTTGTTAATACAATGAAGGATGAAGGAATGGAACTTGATGTAACTACACTTTCCATATTAGCTAAGCACTATGCTTCAAGTGGGCTTAAAGACAAAGCCAAGGCCATTATGCAGGAGATGGAAGAGCTTAGCTCCAAAGATTCTCGATGGCCTTGCAGAATTTTACTTCCCCTTTATGGTGAACTACAAATGGAAGATGAAGTGAGGAGGGTCTGGAAGATATGCGAATCAAATCCTCGTATAGAAGAATGCATGGCTGCCATTGTTGCATGGGGAAAGCTGAAGAACGTCCCAGAAGCAGAGGAAATTTTTGATAGAGTTTTAAAAACATGGAAGAAACTTTCCTCAAAACAATATTCTACCATGTTGAAGGTCTATGCAGACAATAAAATGCTGATGAAGGGCAAGGATCTAGTCAAGCAGATGGCGGACAGCGGTTGCCGCATCGGTCCATTTACATGGGATGCAGTTGTGAAGCTCTATGTGGAAGCTGGGGAGGTAGAAAAAGCAGACTCTTTCTTGCAGAAGGCTGTCCAGAAAAACCAGATGAAGCCATTGTTTACCTCTTACATGATTATTATGGATCAGTACGCAAGGAGGGGTGACGTCCACAATGCAGAGAAAATGTTTCATAGGATGAGACTATCGGGTTACGTGGCTCGATTCAGCCAGTTTCAAACTCTGATACAGGCATACATTAATGCCAAGTCTCCAGCCTATGGTATGAAAGAGAGAATGAAGGCAGATAATGTATTTCCAAACAAAGCTATGGCAGGAAAATTAGCACAAATTGATGCATTCAGGAAGACAGCAGTGTCAGATTTGCTTGAATGAGGAATTTAACTTGATACTTTTGGAATGTATAAACTTCCCAGGTTTCAACTCTATTTTACAAAATCAAGTATTTGTTTGTTAATCAGATGGCTGCTCTTTGAAGTATGAAAGTATACCTGTTAGGACAGAACTTCAAAATTGGATCGTGCTGCACTTGTGTAATATTTGGTTTGTTCCATTACCCATTCTTACCTAGAACTGTGATTTTGCAGTAAACTCAAAATTGTTTGCTGTTATATGTATGCCACTTTAATTTTCACGATCACAGCTATTTAGGGTTTCTTTTTTTCCCTTAGGCTTAGGTGTGCCACTTGACGTTGATTTTGTGGAGAAAAAATGAGTCTGAT

Coding sequence (CDS)

ATGCACGTATATATTGTGGTGGGGAAGGTACAATACCTACAATTTTTCAGATTACTCTCTGTATTATCTTTGTGTTCTCTTTCTAGGAATCAAGGGTATGGAGTGAGAACTTCATATGTCCTTGGCAAACTAGAGATGCAGAATTCGTTGGAAGGAAATAGAGTTGTTTCCAGTACCACCCCTGCTATACCTGATAGATGCATTTCTTTTGTGAGAAATAACCTTGCAACATGGAAGTCCTCTGGCCTTTATATTAGTAGTCATGGTCTATCTTCACAAGCTGGTGCTGAGAACAGTGGAGAGGAAGACGACTTGGAAGATGGATTTTCTGAACTTGAAACACTTCCAAGCACTAGTTCACTTGAAGATAATAAAGCAGCTGATGAAAATGAAGAGGAATTAACCTCTGGATCAGAACTTGATAATGATGATGTTGATGATGGGATTCAAAATGAACTGGATTTACCAGAGGTTGAAACTGAACTTGCTGAAAAGATATCTACAAAAAGGGCTCCTTCAGAGCTGTTCAAGGCTATTTGGAGTGCTCCAGGTTTATCTGTTCCTAGTGCACTTGATAAGTGGGTCAGTGAAGGAAAAGAATTAAGCCGAGCTGATATCTCTCTGGCCATGCTCAATCTTCGTAGACGTCGAATGTTTGGGAAGGCTTTGCAGTTTTCAGAGTGGTTGGAAGCTAGTGGACAACTCGATTTCATTGACAGAGATTATGCTTCTCGCCTTGACTTGATTGCAAAGGTACGGGGTCTCCATAAGGCAGAGAGTTATATTGCTAAAATCCCAAAATCCTTTCAGGGGGAGGTGATATACCGCACTCTTTTGGCAAACTGTGTGGTCGCCAACAATGTAAAAAAGGCAGAGGAAGTATTTAACAAAATGAAGGACCTTGAATTCCCAATCACAACATTTGCTTGCAACCAGTTGCTTCTTCTTTACAAGAGGCTTGACAAGAGGAAAATAGCCGATGTTTTGTTGTTGATGGAGAAAGAAAATGTCAAGCCTTCTCTGTTTACTTACAAAATTTTAATAGATGCTAAAGGCCTTTCAAATGACATGATAGGGATGGAACAAGTTGTTAATACAATGAAGGATGAAGGAATGGAACTTGATGTAACTACACTTTCCATATTAGCTAAGCACTATGCTTCAAGTGGGCTTAAAGACAAAGCCAAGGCCATTATGCAGGAGATGGAAGAGCTTAGCTCCAAAGATTCTCGATGGCCTTGCAGAATTTTACTTCCCCTTTATGGTGAACTACAAATGGAAGATGAAGTGAGGAGGGTCTGGAAGATATGCGAATCAAATCCTCGTATAGAAGAATGCATGGCTGCCATTGTTGCATGGGGAAAGCTGAAGAACGTCCCAGAAGCAGAGGAAATTTTTGATAGAGTTTTAAAAACATGGAAGAAACTTTCCTCAAAACAATATTCTACCATGTTGAAGGTCTATGCAGACAATAAAATGCTGATGAAGGGCAAGGATCTAGTCAAGCAGATGGCGGACAGCGGTTGCCGCATCGGTCCATTTACATGGGATGCAGTTGTGAAGCTCTATGTGGAAGCTGGGGAGGTAGAAAAAGCAGACTCTTTCTTGCAGAAGGCTGTCCAGAAAAACCAGATGAAGCCATTGTTTACCTCTTACATGATTATTATGGATCAGTACGCAAGGAGGGGTGACGTCCACAATGCAGAGAAAATGTTTCATAGGATGAGACTATCGGGTTACGTGGCTCGATTCAGCCAGTTTCAAACTCTGATACAGGCATACATTAATGCCAAGTCTCCAGCCTATGGTATGAAAGAGAGAATGAAGGCAGATAATGTATTTCCAAACAAAGCTATGGCAGGAAAATTAGCACAAATTGATGCATTCAGGAAGACAGCAGTGTCAGATTTGCTTGAATGA

Protein sequence

MHVYIVVGKVQYLQFFRLLSVLSLCSLSRNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDAFRKTAVSDLLE

Homology

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BLAST of Lcy06g015450 vs. ExPASy Swiss-Prot
Match: Q9C977 (Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80270 PE=2 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 1.6e-181
Identity = 332/578 (57.44%), Postives = 443/578 (76.64%), Query Frame = 0


Query: 69  SFVRNNLATWKSSGL-------YISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTSSL 128
           SF  N++A+ K   +        +S+  LSS AG ++  EEDDLEDGFSELE    + S 
Sbjct: 34  SFDSNSIASTKREAVPRFYEISSLSNRALSSSAGTKSDQEEDDLEDGFSELE---GSKSG 93

Query: 129 EDNKAADENEEELTSGSELDNDDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWS 188
           + + ++DE+E +L++         D+  + ELDL  +ET+++ K + ++  SELFK I S
Sbjct: 94  QGSTSSDEDEGKLSA---------DEEEEEELDL--IETDVSRK-TVEKKQSELFKTIVS 153

Query: 189 APGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRD 248
           APGLS+ SALDKWV EG E++R +I+ AML LRRRRM+G+ALQ SEWLEA+ +++  +RD
Sbjct: 154 APGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERD 213

Query: 249 YASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDL 308
           YASRLDL  K+RGL K E+ + KIPKSF+GEV+YRTLLANCV A NVKK+E VFNKMKDL
Sbjct: 214 YASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDL 273

Query: 309 EFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGME 368
            FP++ F C+Q+LLL+KR+D++KIADVLLLMEKEN+KPSL TYKILID KG +ND+ GME
Sbjct: 274 GFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 333

Query: 369 QVVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLY 428
           Q++ TMKDEG+ELD  T ++ A+HY+ +GLKDKA+ +++EME  S + +R   + LL +Y
Sbjct: 334 QILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 393

Query: 429 GELQMEDEVRRVWKICESNPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQY 488
             L  EDEV+R+WKICES P  EE +AAI A+GKL  V EAE IF++++K  ++ SS  Y
Sbjct: 394 ASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTY 453

Query: 489 STMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQ 548
           S +L+VY D+KML KGKDLVK+MA+SGCRI   TWDA++KLYVEAGEVEKADS L KA +
Sbjct: 454 SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASK 513

Query: 549 KNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPA 608
           ++  K +  S+M IMD+Y++RGDVHN EK+F +MR +GY +R  QFQ L+QAYINAKSPA
Sbjct: 514 QSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPA 573

Query: 609 YGMKERMKADNVFPNKAMAGKLAQIDAFRKTAVSDLLE 640
           YGM++R+KADN+FPNK+MA +LAQ D F+KTA+SD+L+
Sbjct: 574 YGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596

[Close]

BLAST of Lcy06g015450 vs. ExPASy Swiss-Prot
Match: Q9XI21 (Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g15480 PE=2 SV=2)

HSP 1 Score: 629.8 bits (1623), Expect = 3.4e-179
Identity = 332/595 (55.80%), Postives = 435/595 (73.11%), Query Frame = 0


Query: 45  EMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSHGLSSQAGAENSGEEDD 104
           E   ++E N ++     A+P       R    +W SS        LSS AGA+ +G++DD
Sbjct: 32  ERNIAIESNALIHDKHEALP-------RFYELSWSSS---TGRRSLSSDAGAKTTGDDDD 91

Query: 105 LEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDGIQNELDLPEVETELAE 164
           LED   +L T   TSS       D  + E  SG E D     +G + EL +PE       
Sbjct: 92  LEDKNVDLATPDETSS-------DSEDGEEFSGDEGD----IEGAELELHVPE------- 151

Query: 165 KISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQ 224
                + PSE+FKAI S  GLSV SALDKWV +GK+ +R +   AML LR+RRMFG+ALQ
Sbjct: 152 ----SKRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQ 211

Query: 225 FSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVV 284
            +EWL+ + Q +  +RDYA RLDLI+KVRG +K E+YI  IP+SF+GE++YRTLLAN V 
Sbjct: 212 MTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVA 271

Query: 285 ANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTY 344
            +NV+ AE VFNKMKDL FP++TF CNQ+L+LYKR+DK+KIADVLLL+EKEN+KP+L TY
Sbjct: 272 TSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTY 331

Query: 345 KILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEE 404
           KILID KG SND+ GMEQ+V TMK EG+ELD+   +++A+HYAS+GLK+KA+ +++EME 
Sbjct: 332 KILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEG 391

Query: 405 LSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMAAIVAWGKLKNVPEAEE 464
            S +++R  C+ LL +YG LQ EDEVRRVWKICE NPR  E +AAI+A+GK+  V +AE 
Sbjct: 392 ESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEA 451

Query: 465 IFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWDAVVKLYV 524
           +F++VLK   ++SS  YS +L+VY D+KM+ +GKDLVKQM+DSGC IG  TWDAV+KLYV
Sbjct: 452 VFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYV 511

Query: 525 EAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARF 584
           EAGEVEKA+S L KA+Q  Q+KPL +S+M +M +Y RRGDVHN EK+F RM+ +GY +RF
Sbjct: 512 EAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRF 571

Query: 585 SQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDAFRKTAVSDLLE 640
             +QTLIQAY+NAK+PAYGMKERMKADN+FPNK +A +LA+ D F+KT +SDLL+
Sbjct: 572 WAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFKKTPLSDLLD 594

[Close]

BLAST of Lcy06g015450 vs. ExPASy Swiss-Prot
Match: Q9LRP6 (Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g15590 PE=1 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 8.1e-149
Identity = 274/557 (49.19%), Postives = 400/557 (71.81%), Query Frame = 0


Query: 84  YISSHGLSSQAGAENSGEEDDLEDGFSEL-ETLPSTSSLEDNKAADENEEELTSGSELDN 143
           +   H LSS A A++ G+E   E+  SE  E +P +  + +    D++  E   GS  DN
Sbjct: 65  FFGIHKLSSIADAKDKGDEVVREEELSESEEAVPVSGDVPEGVVDDDSLFEPELGS--DN 124

Query: 144 DDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELS 203
           DD        L++ E  ++   K + KR  SEL+++I +    SV   L+KWV EGK+LS
Sbjct: 125 DD--------LEIEEKHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKDLS 184

Query: 204 RADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYI 263
           +A+++LA+ NLR+R+ +   LQ  EWL A+ Q +F + +YAS+LDL+AKV  L KAE ++
Sbjct: 185 QAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFL 244

Query: 264 AKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDK 323
             IP+S +GEV+YRTLLANCV+ ++V KAE++FNKMK+L+FP + FACNQLLLLY   D+
Sbjct: 245 KDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDR 304

Query: 324 RKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSIL 383
           +KI+DVLLLME+EN+KPS  TY  LI++KGL+ D+ GME++V T+K+EG+ELD    SIL
Sbjct: 305 KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSIL 364

Query: 384 AKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPR 443
           AK+Y  +GLK++A+ +M+E+E    + + W CR LLPLY ++   D VRR+ +  + NPR
Sbjct: 365 AKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNPR 424

Query: 444 IEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVK 503
            + C++AI AWGKLK V EAE +F+R+++ +K      Y  ++++Y +NKML KG+DLVK
Sbjct: 425 YDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVK 484

Query: 504 QMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARR 563
           +M ++G  IGP TW A+VKLY++AGEV KA+  L +A + N+M+P+FT+YM I+++YA+R
Sbjct: 485 RMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKMRPMFTTYMAILEEYAKR 544

Query: 564 GDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGK 623
           GDVHN EK+F +M+ + Y A+  Q++T++ AYINAK+PAYGM ERMKADNVFPNK++A K
Sbjct: 545 GDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAK 604

Query: 624 LAQIDAFRKTAVSDLLE 640
           LAQ++ F+K  VS LL+
Sbjct: 605 LAQVNPFKKCPVSVLLD 609

[Close]

BLAST of Lcy06g015450 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.9e-39
Identity = 128/479 (26.72%), Postives = 234/479 (48.85%), Query Frame = 0


Query: 165 KISTKRAPSE-LFKAIWSAPG--LSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGK 224
           K STK+   E L+  ++   G  + V   L++++   K + + ++   +  LR R ++  
Sbjct: 14  KRSTKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYP 73

Query: 225 ALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLAN 284
           AL+ SE +E  G    +  D A  LDL+AK R +   E+Y   +P++ + E+ Y +LL N
Sbjct: 74  ALKLSEVMEERGMNKTVS-DQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLL-N 133

Query: 285 CVVANNV-KKAEEVFNKMKDLEFPITTFACNQLLLLY-KRLDKRKIADVLLLMEKENVKP 344
           C     + +KAE + NKMK+L    ++ + N L+ LY K  +  K+  ++  ++ ENV P
Sbjct: 134 CYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMP 193

Query: 345 SLFTYKILIDAKGLSNDMIGMEQVVNTMKDEG-MELDVTTLSILAKHYASSGLKDKAKAI 404
             +TY + + A   +ND+ G+E+V+  M  +G +  D TT S +A  Y  +GL  KA+  
Sbjct: 194 DSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKA 253

Query: 405 MQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICE------SNPRIEECMAAIVA 464
           +QE+E  +++      + L+ LYG L    EV R+W+         SN      +  +V 
Sbjct: 254 LQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLV- 313

Query: 465 WGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSGCRIG 524
             KL ++P AE +F            +  + ++  YA   ++ K  +L ++    G ++ 
Sbjct: 314 --KLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLN 373

Query: 525 PFTWDAVVKLYVEAGEVEKADSFLQKAV-----QKNQMKPLFTSYMIIMDQYARRGDVHN 584
             TW+  +  YV++G++ +A   + KAV        +  P   +   +M  + ++ DV+ 
Sbjct: 374 AKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNG 433

Query: 585 AEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQI 627
           AE +   ++          F+ LI+ Y  A      M+ R+K +NV  N+A    L ++
Sbjct: 434 AENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLLDEV 487

[Close]

BLAST of Lcy06g015450 vs. ExPASy Swiss-Prot
Match: Q940Q2 (Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07590 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.3e-37
Identity = 112/456 (24.56%), Postives = 222/456 (48.68%), Query Frame = 0


Query: 184 GLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYA 243
           G++V SAL  W+ +G  +   D+  A+  LR+     +AL+  EW+         + +Y+
Sbjct: 78  GVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYS 137

Query: 244 SRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEF 303
             L+   K+ G+ + E    ++P+ FQ E++Y  L+  C+    ++ A E   KM++L +
Sbjct: 138 YLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGY 197

Query: 304 PITTFACNQLLLLYKRLDKRK-IADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQ 363
             +    N+L++      +RK IA  L LM+ +   P + TY IL+  +   +++ G+ +
Sbjct: 198 RTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLK 257

Query: 364 VVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYG 423
             + MK  G+E +  +  ILA  +A + L   A+A  +E+E+  + D+     IL+ LYG
Sbjct: 258 AFDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDNWSTLDILMILYG 317

Query: 424 ELQMEDEVRRVWKICES--NPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQ 483
            L  E E+ R W +     + R +  + A  A+ ++ N+  AEE++  +        ++Q
Sbjct: 318 RLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQ 377

Query: 484 YSTMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWD------AVVKLYVEAGEVEKADS 543
           ++++L VY  + ++ K   + ++M  +G +    T+       A  KL  EA +  +   
Sbjct: 378 FNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGL 437

Query: 544 FLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAY 603
            L+ +       P   + + I++ +A +GDV N+EK+F  ++ + Y      +  L +AY
Sbjct: 438 NLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAY 497

Query: 604 INAKSPAYGMKERMKADNVFPNKAMAGKLAQIDAFR 631
           + AK     + +RM      P+      L  ++ ++
Sbjct: 498 VKAKVYDPNLFKRMVLGGARPDAESYSLLKLVEQYK 533

[Close]

BLAST of Lcy06g015450 vs. ExPASy TrEMBL
Match: A0A6J1I643 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469985 PE=3 SV=1)

HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 556/624 (89.10%), Postives = 584/624 (93.59%), Query Frame = 0


Query: 16  FRLLSVLSLCSLSRNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNL 75
           F   S+  LCSLSRNQGY +RTSYV G LE   S EGN V S+  PAI D CISF RN+L
Sbjct: 47  FSYPSLNFLCSLSRNQGYRIRTSYVFGTLEAPYSWEGNIVASAIIPAISDGCISFERNSL 106

Query: 76  ATWKSSGLYISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELT 135
           ATW+ SGL ISSHGLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELT
Sbjct: 107 ATWRPSGLSISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELT 166

Query: 136 SGSELDNDDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWV 195
           S SELD+D VD G QNELDLPE+ETELAEKI  KRAPSELFKAIWSAPG SVPSALDKWV
Sbjct: 167 SESELDDDTVDGGTQNELDLPELETELAEKIPAKRAPSELFKAIWSAPGSSVPSALDKWV 226

Query: 196 SEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGL 255
           SEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GL
Sbjct: 227 SEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGL 286

Query: 256 HKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLL 315
           H+AE YIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLL
Sbjct: 287 HRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLL 346

Query: 316 LYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELD 375
           LYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELD
Sbjct: 347 LYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELD 406

Query: 376 VTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWK 435
           V TLSILAKHYAS GL DKAKAI++EME++SSK+SRWPCRILLPLYGELQMEDEVRRVWK
Sbjct: 407 VNTLSILAKHYASGGLIDKAKAILKEMEDVSSKESRWPCRILLPLYGELQMEDEVRRVWK 466

Query: 436 ICESNPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLM 495
           ICE+NPR++ECMAAIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML 
Sbjct: 467 ICEANPRMDECMAAIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLT 526

Query: 496 KGKDLVKQMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMII 555
           KGKDLVKQMADSGCRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYM+I
Sbjct: 527 KGKDLVKQMADSGCRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVI 586

Query: 556 MDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFP 615
           +DQYARRGDVHNAEKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFP
Sbjct: 587 LDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFP 646

Query: 616 NKAMAGKLAQIDAFRKTAVSDLLE 640
           NKA+AGKLAQIDAFRKTAVSDLL+
Sbjct: 647 NKALAGKLAQIDAFRKTAVSDLLD 670

[Close]

BLAST of Lcy06g015450 vs. ExPASy TrEMBL
Match: A0A6J1EZV3 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440876 PE=3 SV=1)

HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 555/611 (90.83%), Postives = 579/611 (94.76%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S +GN V S+  PAI DRCISF RNNLATW+SSGL ISSH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSCDGNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELTS SELD    DDG
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELTSESELD----DDG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPEVETEL EKIS KRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL
Sbjct: 132 TQNELDLPEVETELGEKISAKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GLKDKAKAI++EME++SSK+SRWPCR+LLPLYGELQMEDEVRRVWKICE+NPRIEECMA
Sbjct: 372 GGLKDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TW+AVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMII+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWNAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 618

[Close]

BLAST of Lcy06g015450 vs. ExPASy TrEMBL
Match: A0A6J1F506 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440885 PE=3 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 553/611 (90.51%), Postives = 578/611 (94.60%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S +GN V S+  PAI DRCISF RNNLATW+SSGL ISSH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSCDGNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELTS SELD    DDG
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELTSESELD----DDG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPEVETEL EKIS KRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL
Sbjct: 132 TQNELDLPEVETELGEKISAKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GLKDKAKAI++EME++SSK+SRWPCR+LLPLYGELQMEDEVRRVWK+CE+NPRIEECMA
Sbjct: 372 GGLKDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKLCEANPRIEECMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYM+I+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFS FQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSPFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 618

[Close]

BLAST of Lcy06g015450 vs. ExPASy TrEMBL
Match: A0A6J1I524 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469986 PE=3 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 553/611 (90.51%), Postives = 578/611 (94.60%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S EGN V S+  PAI D CISF RN+LATW+ SGL ISSH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSWEGNIVASAIIPAISDGCISFERNSLATWRPSGLSISSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELTS SELD+D VD G
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELTSESELDDDTVDAG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPE+ETELAEKI  KRAPSELFKAIWSAPG SVPSALDKWVSEGKELSRADISL
Sbjct: 132 TQNELDLPELETELAEKIPAKRAPSELFKAIWSAPGSSVPSALDKWVSEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELDVHTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GLKDKAKAI++EME++SSK+SRWPCRILLPLYGELQMEDEVRRVWKICE+NPRIEECMA
Sbjct: 372 GGLKDKAKAILKEMEDVSSKESRWPCRILLPLYGELQMEDEVRRVWKICEANPRIEECMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYM+I+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 622

[Close]

BLAST of Lcy06g015450 vs. ExPASy TrEMBL
Match: A0A6J1I2N1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469987 PE=3 SV=1)

HSP 1 Score: 1070.1 bits (2766), Expect = 3.6e-309
Identity = 549/611 (89.85%), Postives = 576/611 (94.27%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S EGN V S+  PAI D CISF RN+LATW+ SGL ISSH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSWEGNIVASAIIPAISDGCISFERNSLATWRPSGLSISSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST +LEDNKAADENE ELTS SELD+D VD G
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTDALEDNKAADENEGELTSESELDDDTVDAG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPE+ETELAEKI  KRAPSELFKAIWSAPG SVPSALDKWVSEGKELSRADISL
Sbjct: 132 TQNELDLPELETELAEKIPAKRAPSELFKAIWSAPGSSVPSALDKWVSEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELDVNTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GL DKAKAI++EME++SSK+SRWPCRILLPLYGELQ+EDEVRRVWKICE+NPR++ECMA
Sbjct: 372 GGLIDKAKAILKEMEDVSSKESRWPCRILLPLYGELQIEDEVRRVWKICEANPRMDECMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYM+I+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 622

[Close]

BLAST of Lcy06g015450 vs. NCBI nr
Match: XP_022971188.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 556/624 (89.10%), Postives = 584/624 (93.59%), Query Frame = 0


Query: 16  FRLLSVLSLCSLSRNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNL 75
           F   S+  LCSLSRNQGY +RTSYV G LE   S EGN V S+  PAI D CISF RN+L
Sbjct: 47  FSYPSLNFLCSLSRNQGYRIRTSYVFGTLEAPYSWEGNIVASAIIPAISDGCISFERNSL 106

Query: 76  ATWKSSGLYISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELT 135
           ATW+ SGL ISSHGLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELT
Sbjct: 107 ATWRPSGLSISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELT 166

Query: 136 SGSELDNDDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWV 195
           S SELD+D VD G QNELDLPE+ETELAEKI  KRAPSELFKAIWSAPG SVPSALDKWV
Sbjct: 167 SESELDDDTVDGGTQNELDLPELETELAEKIPAKRAPSELFKAIWSAPGSSVPSALDKWV 226

Query: 196 SEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGL 255
           SEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GL
Sbjct: 227 SEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGL 286

Query: 256 HKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLL 315
           H+AE YIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLL
Sbjct: 287 HRAEGYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLL 346

Query: 316 LYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELD 375
           LYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELD
Sbjct: 347 LYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELD 406

Query: 376 VTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWK 435
           V TLSILAKHYAS GL DKAKAI++EME++SSK+SRWPCRILLPLYGELQMEDEVRRVWK
Sbjct: 407 VNTLSILAKHYASGGLIDKAKAILKEMEDVSSKESRWPCRILLPLYGELQMEDEVRRVWK 466

Query: 436 ICESNPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLM 495
           ICE+NPR++ECMAAIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML 
Sbjct: 467 ICEANPRMDECMAAIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLT 526

Query: 496 KGKDLVKQMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMII 555
           KGKDLVKQMADSGCRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYM+I
Sbjct: 527 KGKDLVKQMADSGCRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVI 586

Query: 556 MDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFP 615
           +DQYARRGDVHNAEKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFP
Sbjct: 587 LDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFP 646

Query: 616 NKAMAGKLAQIDAFRKTAVSDLLE 640
           NKA+AGKLAQIDAFRKTAVSDLL+
Sbjct: 647 NKALAGKLAQIDAFRKTAVSDLLD 670

[Close]

BLAST of Lcy06g015450 vs. NCBI nr
Match: XP_022933474.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 555/611 (90.83%), Postives = 579/611 (94.76%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S +GN V S+  PAI DRCISF RNNLATW+SSGL ISSH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSCDGNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELTS SELD    DDG
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELTSESELD----DDG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPEVETEL EKIS KRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL
Sbjct: 132 TQNELDLPEVETELGEKISAKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GLKDKAKAI++EME++SSK+SRWPCR+LLPLYGELQMEDEVRRVWKICE+NPRIEECMA
Sbjct: 372 GGLKDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEECMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TW+AVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMII+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWNAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 618

[Close]

BLAST of Lcy06g015450 vs. NCBI nr
Match: XP_022933485.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 553/611 (90.51%), Postives = 578/611 (94.60%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S +GN V S+  PAI DRCISF RNNLATW+SSGL ISSH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSCDGNIVGSAIIPAISDRCISFERNNLATWRSSGLSISSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELTS SELD    DDG
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELTSESELD----DDG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPEVETEL EKIS KRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL
Sbjct: 132 TQNELDLPEVETELGEKISAKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GLKDKAKAI++EME++SSK+SRWPCR+LLPLYGELQMEDEVRRVWK+CE+NPRIEECMA
Sbjct: 372 GGLKDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKLCEANPRIEECMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYM+I+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFS FQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSPFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 618

[Close]

BLAST of Lcy06g015450 vs. NCBI nr
Match: XP_022971190.1 (pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 553/611 (90.51%), Postives = 578/611 (94.60%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S EGN V S+  PAI D CISF RN+LATW+ SGL ISSH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSWEGNIVASAIIPAISDGCISFERNSLATWRPSGLSISSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELTS SELD+D VD G
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEGELTSESELDDDTVDAG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPE+ETELAEKI  KRAPSELFKAIWSAPG SVPSALDKWVSEGKELSRADISL
Sbjct: 132 TQNELDLPELETELAEKIPAKRAPSELFKAIWSAPGSSVPSALDKWVSEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMMGMEQVVDTMKAEGIELDVHTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GLKDKAKAI++EME++SSK+SRWPCRILLPLYGELQMEDEVRRVWKICE+NPRIEECMA
Sbjct: 372 GGLKDKAKAILKEMEDVSSKESRWPCRILLPLYGELQMEDEVRRVWKICEANPRIEECMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYM+I+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMVILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 622

[Close]

BLAST of Lcy06g015450 vs. NCBI nr
Match: KAG6596168.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1074.7 bits (2778), Expect = 4.9e-310
Identity = 554/611 (90.67%), Postives = 576/611 (94.27%), Query Frame = 0


Query: 29  RNQGYGVRTSYVLGKLEMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSH 88
           RNQGY +RTSYV GKLE   S EGN V S+  PAI DRCISF RNNLATW+SSGL I SH
Sbjct: 12  RNQGYRIRTSYVFGKLEAPYSWEGNIVGSAIIPAISDRCISFERNNLATWRSSGLSIRSH 71

Query: 89  GLSSQAGAENSGEEDDLEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDG 148
           GLSSQAGAENSGEEDDLEDGFSELETLPST++LEDNKAADENE ELTS SELD    DDG
Sbjct: 72  GLSSQAGAENSGEEDDLEDGFSELETLPSTNALEDNKAADENEVELTSESELD----DDG 131

Query: 149 IQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISL 208
            QNELDLPEVETEL EKIS KRAPSELFKAIWSAPGLSVPSALDKWV EGKELSRADISL
Sbjct: 132 TQNELDLPEVETELGEKISAKRAPSELFKAIWSAPGLSVPSALDKWVGEGKELSRADISL 191

Query: 209 AMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKS 268
           AMLNLRRRRMFGKALQFSEWLEASGQL+F+DRDYASRLDLIAKV GLH+AE YIAKIPKS
Sbjct: 192 AMLNLRRRRMFGKALQFSEWLEASGQLEFVDRDYASRLDLIAKVHGLHRAEGYIAKIPKS 251

Query: 269 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADV 328
           FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPIT FACNQLLLLYKRLDKRKIADV
Sbjct: 252 FQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITAFACNQLLLLYKRLDKRKIADV 311

Query: 329 LLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYAS 388
           LLLMEKENVKPSLFTYKILIDAKGLSNDM+GMEQVV+TMK EG+ELDV TLSILAKHYAS
Sbjct: 312 LLLMEKENVKPSLFTYKILIDAKGLSNDMVGMEQVVDTMKAEGIELDVNTLSILAKHYAS 371

Query: 389 SGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMA 448
            GLKDKAKAI++EME++SSK+SRWPCR+LLPLYGELQMEDEVRRVWKICE+NPRIEE MA
Sbjct: 372 GGLKDKAKAILKEMEDVSSKESRWPCRLLLPLYGELQMEDEVRRVWKICEANPRIEESMA 431

Query: 449 AIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSG 508
           AIVAWGKLKNV EAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKML KGKDLVKQMADSG
Sbjct: 432 AIVAWGKLKNVQEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLTKGKDLVKQMADSG 491

Query: 509 CRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNA 568
           CRIGP TWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMII+DQYARRGDVHNA
Sbjct: 492 CRIGPLTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIILDQYARRGDVHNA 551

Query: 569 EKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDA 628
           EKMFHRMRLSGYVARFSQFQ LIQAYINAK+PAYGMKERMKADNVFPNKA+AGKLAQIDA
Sbjct: 552 EKMFHRMRLSGYVARFSQFQALIQAYINAKAPAYGMKERMKADNVFPNKALAGKLAQIDA 611

Query: 629 FRKTAVSDLLE 640
           FRKTAVSDLL+
Sbjct: 612 FRKTAVSDLLD 618

[Close]

BLAST of Lcy06g015450 vs. TAIR 10
Match: AT1G80270.1 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 637.5 bits (1643), Expect = 1.2e-182
Identity = 332/578 (57.44%), Postives = 443/578 (76.64%), Query Frame = 0


Query: 69  SFVRNNLATWKSSGL-------YISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTSSL 128
           SF  N++A+ K   +        +S+  LSS AG ++  EEDDLEDGFSELE    + S 
Sbjct: 34  SFDSNSIASTKREAVPRFYEISSLSNRALSSSAGTKSDQEEDDLEDGFSELE---GSKSG 93

Query: 129 EDNKAADENEEELTSGSELDNDDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWS 188
           + + ++DE+E +L++         D+  + ELDL  +ET+++ K + ++  SELFK I S
Sbjct: 94  QGSTSSDEDEGKLSA---------DEEEEEELDL--IETDVSRK-TVEKKQSELFKTIVS 153

Query: 189 APGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRD 248
           APGLS+ SALDKWV EG E++R +I+ AML LRRRRM+G+ALQ SEWLEA+ +++  +RD
Sbjct: 154 APGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERD 213

Query: 249 YASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDL 308
           YASRLDL  K+RGL K E+ + KIPKSF+GEV+YRTLLANCV A NVKK+E VFNKMKDL
Sbjct: 214 YASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDL 273

Query: 309 EFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGME 368
            FP++ F C+Q+LLL+KR+D++KIADVLLLMEKEN+KPSL TYKILID KG +ND+ GME
Sbjct: 274 GFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 333

Query: 369 QVVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLY 428
           Q++ TMKDEG+ELD  T ++ A+HY+ +GLKDKA+ +++EME  S + +R   + LL +Y
Sbjct: 334 QILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 393

Query: 429 GELQMEDEVRRVWKICESNPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQY 488
             L  EDEV+R+WKICES P  EE +AAI A+GKL  V EAE IF++++K  ++ SS  Y
Sbjct: 394 ASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTY 453

Query: 489 STMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQ 548
           S +L+VY D+KML KGKDLVK+MA+SGCRI   TWDA++KLYVEAGEVEKADS L KA +
Sbjct: 454 SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASK 513

Query: 549 KNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPA 608
           ++  K +  S+M IMD+Y++RGDVHN EK+F +MR +GY +R  QFQ L+QAYINAKSPA
Sbjct: 514 QSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPA 573

Query: 609 YGMKERMKADNVFPNKAMAGKLAQIDAFRKTAVSDLLE 640
           YGM++R+KADN+FPNK+MA +LAQ D F+KTA+SD+L+
Sbjct: 574 YGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596

[Close]

BLAST of Lcy06g015450 vs. TAIR 10
Match: AT1G80270.2 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 637.5 bits (1643), Expect = 1.2e-182
Identity = 332/578 (57.44%), Postives = 443/578 (76.64%), Query Frame = 0


Query: 69  SFVRNNLATWKSSGL-------YISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTSSL 128
           SF  N++A+ K   +        +S+  LSS AG ++  EEDDLEDGFSELE    + S 
Sbjct: 34  SFDSNSIASTKREAVPRFYEISSLSNRALSSSAGTKSDQEEDDLEDGFSELE---GSKSG 93

Query: 129 EDNKAADENEEELTSGSELDNDDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWS 188
           + + ++DE+E +L++         D+  + ELDL  +ET+++ K + ++  SELFK I S
Sbjct: 94  QGSTSSDEDEGKLSA---------DEEEEEELDL--IETDVSRK-TVEKKQSELFKTIVS 153

Query: 189 APGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRD 248
           APGLS+ SALDKWV EG E++R +I+ AML LRRRRM+G+ALQ SEWLEA+ +++  +RD
Sbjct: 154 APGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERD 213

Query: 249 YASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDL 308
           YASRLDL  K+RGL K E+ + KIPKSF+GEV+YRTLLANCV A NVKK+E VFNKMKDL
Sbjct: 214 YASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDL 273

Query: 309 EFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGME 368
            FP++ F C+Q+LLL+KR+D++KIADVLLLMEKEN+KPSL TYKILID KG +ND+ GME
Sbjct: 274 GFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 333

Query: 369 QVVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLY 428
           Q++ TMKDEG+ELD  T ++ A+HY+ +GLKDKA+ +++EME  S + +R   + LL +Y
Sbjct: 334 QILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 393

Query: 429 GELQMEDEVRRVWKICESNPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQY 488
             L  EDEV+R+WKICES P  EE +AAI A+GKL  V EAE IF++++K  ++ SS  Y
Sbjct: 394 ASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTY 453

Query: 489 STMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQ 548
           S +L+VY D+KML KGKDLVK+MA+SGCRI   TWDA++KLYVEAGEVEKADS L KA +
Sbjct: 454 SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASK 513

Query: 549 KNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPA 608
           ++  K +  S+M IMD+Y++RGDVHN EK+F +MR +GY +R  QFQ L+QAYINAKSPA
Sbjct: 514 QSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPA 573

Query: 609 YGMKERMKADNVFPNKAMAGKLAQIDAFRKTAVSDLLE 640
           YGM++R+KADN+FPNK+MA +LAQ D F+KTA+SD+L+
Sbjct: 574 YGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596

[Close]

BLAST of Lcy06g015450 vs. TAIR 10
Match: AT1G80270.3 (PENTATRICOPEPTIDE REPEAT 596 )

HSP 1 Score: 637.5 bits (1643), Expect = 1.2e-182
Identity = 332/578 (57.44%), Postives = 443/578 (76.64%), Query Frame = 0


Query: 69  SFVRNNLATWKSSGL-------YISSHGLSSQAGAENSGEEDDLEDGFSELETLPSTSSL 128
           SF  N++A+ K   +        +S+  LSS AG ++  EEDDLEDGFSELE    + S 
Sbjct: 34  SFDSNSIASTKREAVPRFYEISSLSNRALSSSAGTKSDQEEDDLEDGFSELE---GSKSG 93

Query: 129 EDNKAADENEEELTSGSELDNDDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWS 188
           + + ++DE+E +L++         D+  + ELDL  +ET+++ K + ++  SELFK I S
Sbjct: 94  QGSTSSDEDEGKLSA---------DEEEEEELDL--IETDVSRK-TVEKKQSELFKTIVS 153

Query: 189 APGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRD 248
           APGLS+ SALDKWV EG E++R +I+ AML LRRRRM+G+ALQ SEWLEA+ +++  +RD
Sbjct: 154 APGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERD 213

Query: 249 YASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDL 308
           YASRLDL  K+RGL K E+ + KIPKSF+GEV+YRTLLANCV A NVKK+E VFNKMKDL
Sbjct: 214 YASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMKDL 273

Query: 309 EFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGME 368
            FP++ F C+Q+LLL+KR+D++KIADVLLLMEKEN+KPSL TYKILID KG +ND+ GME
Sbjct: 274 GFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISGME 333

Query: 369 QVVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLY 428
           Q++ TMKDEG+ELD  T ++ A+HY+ +GLKDKA+ +++EME  S + +R   + LL +Y
Sbjct: 334 QILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLSIY 393

Query: 429 GELQMEDEVRRVWKICESNPRIEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQY 488
             L  EDEV+R+WKICES P  EE +AAI A+GKL  V EAE IF++++K  ++ SS  Y
Sbjct: 394 ASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTY 453

Query: 489 STMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQ 548
           S +L+VY D+KML KGKDLVK+MA+SGCRI   TWDA++KLYVEAGEVEKADS L KA +
Sbjct: 454 SVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASK 513

Query: 549 KNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPA 608
           ++  K +  S+M IMD+Y++RGDVHN EK+F +MR +GY +R  QFQ L+QAYINAKSPA
Sbjct: 514 QSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKSPA 573

Query: 609 YGMKERMKADNVFPNKAMAGKLAQIDAFRKTAVSDLLE 640
           YGM++R+KADN+FPNK+MA +LAQ D F+KTA+SD+L+
Sbjct: 574 YGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596

[Close]

BLAST of Lcy06g015450 vs. TAIR 10
Match: AT1G15480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 629.8 bits (1623), Expect = 2.4e-180
Identity = 332/595 (55.80%), Postives = 435/595 (73.11%), Query Frame = 0


Query: 45  EMQNSLEGNRVVSSTTPAIPDRCISFVRNNLATWKSSGLYISSHGLSSQAGAENSGEEDD 104
           E   ++E N ++     A+P       R    +W SS        LSS AGA+ +G++DD
Sbjct: 32  ERNIAIESNALIHDKHEALP-------RFYELSWSSS---TGRRSLSSDAGAKTTGDDDD 91

Query: 105 LEDGFSELETLPSTSSLEDNKAADENEEELTSGSELDNDDVDDGIQNELDLPEVETELAE 164
           LED   +L T   TSS       D  + E  SG E D     +G + EL +PE       
Sbjct: 92  LEDKNVDLATPDETSS-------DSEDGEEFSGDEGD----IEGAELELHVPE------- 151

Query: 165 KISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELSRADISLAMLNLRRRRMFGKALQ 224
                + PSE+FKAI S  GLSV SALDKWV +GK+ +R +   AML LR+RRMFG+ALQ
Sbjct: 152 ----SKRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQ 211

Query: 225 FSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYIAKIPKSFQGEVIYRTLLANCVV 284
            +EWL+ + Q +  +RDYA RLDLI+KVRG +K E+YI  IP+SF+GE++YRTLLAN V 
Sbjct: 212 MTEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVA 271

Query: 285 ANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDKRKIADVLLLMEKENVKPSLFTY 344
            +NV+ AE VFNKMKDL FP++TF CNQ+L+LYKR+DK+KIADVLLL+EKEN+KP+L TY
Sbjct: 272 TSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTY 331

Query: 345 KILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSILAKHYASSGLKDKAKAIMQEMEE 404
           KILID KG SND+ GMEQ+V TMK EG+ELD+   +++A+HYAS+GLK+KA+ +++EME 
Sbjct: 332 KILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEG 391

Query: 405 LSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPRIEECMAAIVAWGKLKNVPEAEE 464
            S +++R  C+ LL +YG LQ EDEVRRVWKICE NPR  E +AAI+A+GK+  V +AE 
Sbjct: 392 ESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEA 451

Query: 465 IFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVKQMADSGCRIGPFTWDAVVKLYV 524
           +F++VLK   ++SS  YS +L+VY D+KM+ +GKDLVKQM+DSGC IG  TWDAV+KLYV
Sbjct: 452 VFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYV 511

Query: 525 EAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARRGDVHNAEKMFHRMRLSGYVARF 584
           EAGEVEKA+S L KA+Q  Q+KPL +S+M +M +Y RRGDVHN EK+F RM+ +GY +RF
Sbjct: 512 EAGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRF 571

Query: 585 SQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGKLAQIDAFRKTAVSDLLE 640
             +QTLIQAY+NAK+PAYGMKERMKADN+FPNK +A +LA+ D F+KT +SDLL+
Sbjct: 572 WAYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFKKTPLSDLLD 594

[Close]

BLAST of Lcy06g015450 vs. TAIR 10
Match: AT3G15590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 528.9 bits (1361), Expect = 5.8e-150
Identity = 274/557 (49.19%), Postives = 400/557 (71.81%), Query Frame = 0


Query: 84  YISSHGLSSQAGAENSGEEDDLEDGFSEL-ETLPSTSSLEDNKAADENEEELTSGSELDN 143
           +   H LSS A A++ G+E   E+  SE  E +P +  + +    D++  E   GS  DN
Sbjct: 65  FFGIHKLSSIADAKDKGDEVVREEELSESEEAVPVSGDVPEGVVDDDSLFEPELGS--DN 124

Query: 144 DDVDDGIQNELDLPEVETELAEKISTKRAPSELFKAIWSAPGLSVPSALDKWVSEGKELS 203
           DD        L++ E  ++   K + KR  SEL+++I +    SV   L+KWV EGK+LS
Sbjct: 125 DD--------LEIEEKHSKDGGKPTKKRGQSELYESIVAYK--SVKHVLEKWVKEGKDLS 184

Query: 204 RADISLAMLNLRRRRMFGKALQFSEWLEASGQLDFIDRDYASRLDLIAKVRGLHKAESYI 263
           +A+++LA+ NLR+R+ +   LQ  EWL A+ Q +F + +YAS+LDL+AKV  L KAE ++
Sbjct: 185 QAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQLDLVAKVHSLQKAEIFL 244

Query: 264 AKIPKSFQGEVIYRTLLANCVVANNVKKAEEVFNKMKDLEFPITTFACNQLLLLYKRLDK 323
             IP+S +GEV+YRTLLANCV+ ++V KAE++FNKMK+L+FP + FACNQLLLLY   D+
Sbjct: 245 KDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLYSMHDR 304

Query: 324 RKIADVLLLMEKENVKPSLFTYKILIDAKGLSNDMIGMEQVVNTMKDEGMELDVTTLSIL 383
           +KI+DVLLLME+EN+KPS  TY  LI++KGL+ D+ GME++V T+K+EG+ELD    SIL
Sbjct: 305 KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETIKEEGIELDPELQSIL 364

Query: 384 AKHYASSGLKDKAKAIMQEMEELSSKDSRWPCRILLPLYGELQMEDEVRRVWKICESNPR 443
           AK+Y  +GLK++A+ +M+E+E    + + W CR LLPLY ++   D VRR+ +  + NPR
Sbjct: 365 AKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIGDSDNVRRLSRFVDQNPR 424

Query: 444 IEECMAAIVAWGKLKNVPEAEEIFDRVLKTWKKLSSKQYSTMLKVYADNKMLMKGKDLVK 503
            + C++AI AWGKLK V EAE +F+R+++ +K      Y  ++++Y +NKML KG+DLVK
Sbjct: 425 YDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVK 484

Query: 504 QMADSGCRIGPFTWDAVVKLYVEAGEVEKADSFLQKAVQKNQMKPLFTSYMIIMDQYARR 563
           +M ++G  IGP TW A+VKLY++AGEV KA+  L +A + N+M+P+FT+YM I+++YA+R
Sbjct: 485 RMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKMRPMFTTYMAILEEYAKR 544

Query: 564 GDVHNAEKMFHRMRLSGYVARFSQFQTLIQAYINAKSPAYGMKERMKADNVFPNKAMAGK 623
           GDVHN EK+F +M+ + Y A+  Q++T++ AYINAK+PAYGM ERMKADNVFPNK++A K
Sbjct: 545 GDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMIERMKADNVFPNKSLAAK 604

Query: 624 LAQIDAFRKTAVSDLLE 640
           LAQ++ F+K  VS LL+
Sbjct: 605 LAQVNPFKKCPVSVLLD 609

The following BLAST results are available for this feature:

BLAST of Lcy06g015450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C977	1.6e-181	57.44	Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidop...	[more]
Q9XI21	3.4e-179	55.80	Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidop...	[more]
Q9LRP6	8.1e-149	49.19	Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidop...	[more]
O22714	6.9e-39	26.72	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q940Q2	1.3e-37	24.56	Pentatricopeptide repeat-containing protein At1g07590, mitochondrial OS=Arabidop...	[more]

BLAST of Lcy06g015450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I643	0.0e+00	89.10	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor...	[more]
A0A6J1EZV3	0.0e+00	90.83	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc...	[more]
A0A6J1F506	0.0e+00	90.51	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc...	[more]
A0A6J1I524	0.0e+00	90.51	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc...	[more]
A0A6J1I2N1	3.6e-309	89.85	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like OS=Cuc...	[more]

BLAST of Lcy06g015450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971188.1	0.0e+00	89.10	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like isofor...	[more]
XP_022933474.1	0.0e+00	90.83	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur...	[more]
XP_022933485.1	0.0e+00	90.51	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur...	[more]
XP_022971190.1	0.0e+00	90.51	pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Cucur...	[more]
KAG6596168.1	4.9e-310	90.67	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Lcy06g015450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80270.1	1.2e-182	57.44	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.2	1.2e-182	57.44	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G80270.3	1.2e-182	57.44	PENTATRICOPEPTIDE REPEAT 596	[more]
AT1G15480.1	2.4e-180	55.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G15590.1	5.8e-150	49.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 388..408
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..149
None	No IPR available	PANTHER	PTHR45717:SF15	OS01G0280400 PROTEIN	coord: 42..639
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 42..639
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 307..350 e-value: 3.0E-4 score: 20.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 273..304 e-value: 1.3E-4 score: 19.9 coord: 551..581 e-value: 5.6E-5 score: 21.0 coord: 481..510 e-value: 0.0015 score: 16.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 551..579 e-value: 4.3E-4 score: 20.4 coord: 378..405 e-value: 1.4 score: 9.3 coord: 481..509 e-value: 0.037 score: 14.3 coord: 514..541 e-value: 0.51 score: 10.7 coord: 273..301 e-value: 0.0045 score: 17.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 548..582 score: 8.900633
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 477..511 score: 8.659485
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 271..448 e-value: 1.2E-23 score: 85.9 coord: 449..636 e-value: 6.5E-25 score: 90.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g015450.1	Lcy06g015450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding