Lcy06g015410 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTAAAGATCCATGGATCCCAAGGATTTCTACTTTTAGGCCTATTTGCACTGATCTGTCCTTTTTCAATCAAAAAGTGTCTGATTTCATGGAGATGTCAGGGAACTGGAGACTAGAAAAGTTAAAGCAGTGTGTTTTGCAGGAGGACATTGAAATTATTAGGAGAATCCCAACAAATTTAAGCATTAAAGACAATATAATCTGGCACTATGATCGCTTAGGCACTTACACTGTCAAGAGCGGATACAAATTGTTCATGAACAATAAAATCAATGAGATGTCCTCAAGCAATAACACATTGGAAAAAATGTGGAACAAATTTTGGAAGATTAAAGTCCCAGCAAAAATTAAACATTTGGGTTGGAAAGCACTAAATGAGATTCTCCCTACTAAAATCAATCTAAAAAACAGAGGAATTGATATTCAAACTAACTGTCCAGTTTGTGTGAATTCTAGTGAATCGACTGATCATATTTTGTTTACTTGTGTTCGTGCGAGGGAGATTTGGGAAGATATTCCAGCAAATGTGCACCTGAATGAGGATTTCAACAATTGCCTAATCGATAGATGGATGAGAATTCTTGAGGATCCTAGTCCAACTAACCTAGATCTGGTGATAACAACATGCTGGTCAATTTGGAGCGACAGAAACAAAATCATTCATGGAGAATCTATTCCCCCAGCAAATGTTCGTAAGAATTGGATATTAAATTACCTGACAGATTTTCGAAGAACAAATGTGCCAGAGGTGTTGAAGAAGAATCCTAGTCCTTCTACGGATCCGTCATCTACGCATCTAAATATCCCCTCTCAAGAATCTGATGCCTTGAGAATTTTCGTTGATGCGGCATGGACTTCCAATCCCCCTGAAACTGGTATTGGAGTGGTTTGCTTCAATCAGAGAGGTAGTTTGGAAGGAGCAGCGGCTTCATCTTTTGATTTGGATTTTAAAGCTCCCCTTGCTGAGCTGAAAGCCATAAACGAGGGCCTAAAGCTGGCAAAAGCTCTTGCATGCTCAAAGGTAGTGATTAAGTCAGACTGTCTGCAAGCAATTAAATTTGTGACAAAAGCCTCTGAAACTTGGAGTGATGTGGAAGTGCTTGTTAAGGAGATTTGGGACAACGCAGAATCATTTGAGATGTGTACTTTTGATTATATCCCCAGAGTGCACAATAGTTTAGCTGATTACATTGCTAAGGAGGCTAAAAGGTTGGGGTTTAATGCTGTATGGGTGAGTTCAATCCTAGAGTGGGTTGTTTCGTTGGTCGAGTATGACCGTTCTATCTCTGCCCTCGGTGGCGTAATAATATGATATTTTTCCTTCTCAAAAAAAAAAAATTGTTTTTATTTTTATTTTACATATTTGATAGAATGGGAAATCATGTAACGAATCATGATTCAATTGTCAAAATTCAACTTGATTTTTAATCGATTTAATGAAATTTTAAAATGATTTAGTGTACTCTTTTTAATATTTGAATTCATTTTAAATAATCTCATATCGAATCTGATAATGTGTAATTAAAACGAGAATATTTTATCAAAAAAAAAATTAAAATGAGAATATAATTAAGTAAAACATGTAAGAAAATTATAGAAAAATAATTGTAACCAAGTGGTTTAAATAACAATTTTAGTTTATATGCTTTAATCATTATTTCAGTTTAGCCTTTACATTTTTCAAATTTTTATTATATTCTTACCGTTTAATTTAGAAATCTAACCTGACAAGTCAATAGTAGATGCAAAACTTTAAAAGGGTAGTGAAATTTATTTTAGGGCTAAATTATAAAAAATACCCTTGAACTATGAAATTTGTTTAAAAAATGTCTTTGAACTTTTAAAAGTTTCAAAACTACCTCTGAACTTAAGAAAAAAAAAAGGAAAAAAATACACTTTTAGTCTCTGAGATTTGGGTTAAGTTACACTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATATCCTGAGGTTTGAGATAAGGAGCACTTTGGTCTCTGCCGTCCATTTTGCCGTTAAATGGTAACGGATTGATGACGTGGCATGATTATTTTAATTAAAAATTTAATTTTCAATTTTTTTAAATAAAAATATATTAAAATAATAATAAAAAATTATTATTTTATTATTTTTTTTTAAATTCTTTCTTCTCTATCTTCTTTCTCCTCTTCATCTTCTTCCCTCCTCATCTTCTTCCCTCCTTATCTTCTTCTTCTTCAGCTCCGGTGGCCGGCCATCGTCGGCCGTCGTCGGCTGCCAGCGAACGGCGGCGGCCACCGTCGGATTTTTTTTTCTTTCTTCTTCTCCTTTCTTTTCTTTCTTCTAGGTCAAAGCTATCCACGGTTAGAATAACCAGTAATCTAATCCAATGGTCGTAGTTGTATTACCAGACAAATTCCCCTGCACCGTCCGATTTCTCAATCATCGCCAACGCCAAATCGTCACCTCACGTTGCGTTGACTGGACGAGGACGACCATGTAGAAAACGAAATGACCCTTTAACAAAACCACGACGATTTCCAGTTTCACCGCTCCCAGCTCCCTCTCTGTCCCCTCCTCCCAAGTTCGAAACCCTAAATCGACATCTCTCCTTTAAAATTTCACACCCTTTTTCGCTTGGATTGTTCAGCTATGGATGTTTTTCTCTGGGTAAGATTGCGTTCTCTGTGCTGGATTCTAATGGGTTCATTTCAGTATTTGCTTATTCACTCTTTGAGTGTTTCTGATTGGTGGGATCTTGAGATGGTATTGTTTCTATTGATGGGTTCTTCTTCCCCTCTTCTTTATTTCTCTATGAATTCTGTCTCGAACTTCTCTTTTGTTCTCTGATTTTGGGTTTCGTTTGGAATGAGGGTCTGTTTGCAACATAGCTTAATTCTGGCTTTCTTTTCTCTTTCTGAAAATGAAATGAATTCTCTCATGGGGAGTGTTCCTGCTTCTCGAATTTATGCATTTCTTTCTTTTATTTATAGAGGAATTAGTGGCATTGTCCAAGATGATCATTTTGAGATGTAGCAAAACATAGGAATCATAATTTTTTCTTCTATGTTCTAATGGGGATTTTTCCTGCCGTTTCAATATTTAGATTTTTCTAAAGGGGTACTGCTTATGTGGGGTTCTTGACTTTGTCTCCAGTGTTCATCTAGCATATATTCAGTCATATAATGGATCCAAAATCTACTGAGTCCCCAACATCAACTATTGTTAATACCTTGGAGACTAAACCTGATATATACGTGAGGCGGCGGCCGCCAGAATTTCTTTTCTTTCTTTCTTCAGATCTGAAACGGGAGGGGGAGTTTCCTCTGAATCTCCCTTTGTTTAAAAAAAACAGAAGAAAGAAAAAAAAAGGAGAATAAGGGAAGAAGAAGGGAAGAAAAAGAAAGAAGAAAAAAAAAATCCGGCGGCCGGCCACCGGAGCTGAAGAAGAAGATAAAGAGGGAAGAAGATGAAAAGGAGAAATAAGATGAAGAAGAAAGAAAAAGAGAGAAAGAATTGAAAAAAATAATAATAAAATAATAATTTTTTATTATTTTAATATATTTTTATTTAAAAAAATTTAAAATTAATTTTTTAATTAAAATAATCATGCCACGTCATCAATCCGTTACCATTTAACGACAAAATGGACGGCAGGGACCAAATTGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTCAGGGACCAAAAGTATATTTTTCCCTTAAAAAAATGTTTCAGAAATACATTTGTCGTTAATTTTTGGATGGAAATCGTTAAAGTTAAAATTTCAGATTCATTAATACCCTTGAATTTTAAAAAATGTTTAAAAAATAACTTTATTGGAAAATGTTTCTTTTTCCTTCTCTCACCTTAAATTTTTCCTCCATGAAAATTAATGAGAAACTTTACCTATTTGTCATGTATTCACACTGGGAACTTTTCTTCTCTTTCAACACATCATCCCAAGAGCTTGATTAGATTTTCGGCAAGAGAATTTTTTAAACGTTTTTAGTGGTTTTAACGATTTTCATCCAAAAATTAACGATAAAGGTTATTTTGAAACATTTTTTAAAGTTTAGGGATATTTTTGACATTTTTTAAAGTTCAAGGACATTTTTGAAACAAACCCCATAGTGCAGGGGTATTTTTTTTGTTTTTGTTTTGTTTTTTTTTTTAGTTTTTTTTTTAAATTTAGCCTTTATTTTAAGGACATGGAGACCTAGTGAGTCACATTAATTGAAAATATGTATTTGATTTTGTTTTAAGTTATTATTTTGATTGAAAAGTAGAACGAGGCTAGGACTCTTAGGTTAGAGTACAAAGTTGCAAGGGAAATTGTGGTAAATGGCTAGGAAAAAAACTCCTTATGTTTTATGGCTAAAGTAGTTTAGTATTTGGGGGATGGCTACCGTGATTTTAGGAACTGTCAACCGATCTATTTTTTCCCATTTTACCCCTTGGTGTATACTGTTATTTACAGCTCTGACCAACTCAACTACCAATATTCAATTTTTTTAAAAAAAATCAACGTAAGATTTTTCTCAACCAAAAAATCTTAAGTCACGTGGATTTTCCTAAATATTTGTTAAAAAAAAAAAAAAAAAAAAACTAATTTTTTCCTATATTTTCTCAGTTCCAACAAAGTTTTTTTCTACATTCTCACTCATCTCTTCACAATCAACGTTCCAATATTTGCCTGAAATCCAGAATTCAAATTTCATCTCCACTGTCTTTGCACCACCATAATTTTTTCAATAATGGCTTCCCATCCAGTTTTGATCCTATACGATAGCGTTTGGACACTGATTCTGTCACAGACCTTATTAGACATGATGCTTGAAAGAAAATTTCACATATCTACTAATGGTGAAGACAAGTTTCAGATTATAAGCTTTTCTGAGAACGAAGATCTTGCTTGGATGTTCGCTGGGGTATATAACCGGATGTACCACAATTGTTCCTTTTCGTATATGTTGAAAGTGTGGATACTAGTATCCATAGGGACGATGCAAGCCTGAATTCAACAGAAAATACAAACAACGGAGGAGGATTTCATGTAAGTGTACCTATCAACACAATACACTGACTGTGCTGTCAGTGTGGATGTTGAGCTTGTAGATACCAATATACACAGAGGTAGTGTTGGACCAAATCCACTAAGGAGAATGCAACTCGGAGAAGAATAATGTTGGTTTCCTTAATTCAGTGGTAAGTGATGTGTTTTACACCAATAGATATGGTTAAATACAAGTTGTAGTTGAGTAATAGTCCTTGCAATTTTGAATTGTGTCAACAAGGTCCTCAAAGACAAGTTTTTAAAGCATTTTACATTGTCAAGGAAGATGGCGAGAACCGAGTAATGTTTAATTATTGTATTAACTATATGTGTATACTCTTATGTACATAGAGATTCTTGAGATATGTACCCTTATCCATATGCAAGCAATTGATAGGTTTATTGAGTATGATGCTTGTTTGTATATACATATATATATTGTTGTACTTATTGTGTTTTTGTACAAATTCTTTAACATTCTAAAGTTGTGAAAGATAAACACGAGACCTTTTCACAACTTTAGAGTGTTAAATAATTTGTAGTACTAATGCAAAATCGAAGAGAGATGAGTTCCATGAAGAAAACTGAGATCTAAGATCTTGTAAAAAGTTGAGTTTAGCGATTTTATTTATGTTTTTTTAAACTTTTTTTTAAAGCCTTTTTTTTAAACTTACCAATCTCTTAAGAAGAAATAAGTATAGTCCTACTATACACGGTAAACAATGGATGAATTCTGAATTTCCTTGATGTTTTATTCATACAATTTGGGTCCTTTTATATACAAAGGATGGACCAAAATTTAGGCAAGACATAAGCTGAAAATAAATGTACAAAACGTTTACAATTAGAAGCTAAAATCAAGGCATGACTTTAATGAGAAATATATGCAAGAATCAAGGTAATTATGTGCTGTAATATACACTACTAAGACATGAGAGAAAATTTCTAAGATAAATTCATTTCACATCATCTTGACGTTGTTGTTATTGACAAAAAAAAAAACTTATTATTATTATTATTTAGTTAAACCAACCAACAAAAACATAATCTAATTGTCAAAGCGAGCATAGTTTAACAATAATTGACATGTAACCTCGACTGAAAGATTAGATGTTTGAATCCACCACCTATCAATGTTGATCAACTTCAAAAAAAAAAAAAATCATTTTTTCCTCTCGAATTTTATTCCAAAAATAAGAAACACAAACAAAATTAGGCAATGGCAAACATTTTTTACCACTCTTATTCAGTTAGTGCCAAACCTTCAAACTATCAACATACTCTACTTTCCCCAATGCCACCGCCGCCGCCGCCGGCCATGCTCTGCCGTAG ATGTTTAAAGATCCATGGATCCCAAGGATTTCTACTTTTAGGCCTATTTGCACTGATCTGTCCTTTTTCAATCAAAAAGTGTCTGATTTCATGGAGATGTCAGGGAACTGGAGACTAGAAAAGTTAAAGCAGTGTGTTTTGCAGGAGGACATTGAAATTATTAGGAGAATCCCAACAAATTTAAGCATTAAAGACAATATAATCTGGCACTATGATCGCTTAGGCACTTACACTGTCAAGAGCGGATACAAATTGTTCATGAACAATAAAATCAATGAGATGTCCTCAAGCAATAACACATTGGAAAAAATGTGGAACAAATTTTGGAAGATTAAAGTCCCAGCAAAAATTAAACATTTGGGTTGGAAAGCACTAAATGAGATTCTCCCTACTAAAATCAATCTAAAAAACAGAGGAATTGATATTCAAACTAACTGTCCAGTTTGTGTGAATTCTAGTGAATCGACTGATCATATTTTGTTTACTTGTGTTCGTGCGAGGGAGATTTGGGAAGATATTCCAGCAAATGTGCACCTGAATGAGGATTTCAACAATTGCCTAATCGATAGATGGATGAGAATTCTTGAGGATCCTAGTCCAACTAACCTAGATCTGTATTTGCTTATTCACTCTTTGAGTGTTTCTGATTGGTGGGATCTTGAGATGTGCCAAACCTTCAAACTATCAACATACTCTACTTTCCCCAATGCCACCGCCGCCGCCGCCGGCCATGCTCTGCCGTAG ATGTTTAAAGATCCATGGATCCCAAGGATTTCTACTTTTAGGCCTATTTGCACTGATCTGTCCTTTTTCAATCAAAAAGTGTCTGATTTCATGGAGATGTCAGGGAACTGGAGACTAGAAAAGTTAAAGCAGTGTGTTTTGCAGGAGGACATTGAAATTATTAGGAGAATCCCAACAAATTTAAGCATTAAAGACAATATAATCTGGCACTATGATCGCTTAGGCACTTACACTGTCAAGAGCGGATACAAATTGTTCATGAACAATAAAATCAATGAGATGTCCTCAAGCAATAACACATTGGAAAAAATGTGGAACAAATTTTGGAAGATTAAAGTCCCAGCAAAAATTAAACATTTGGGTTGGAAAGCACTAAATGAGATTCTCCCTACTAAAATCAATCTAAAAAACAGAGGAATTGATATTCAAACTAACTGTCCAGTTTGTGTGAATTCTAGTGAATCGACTGATCATATTTTGTTTACTTGTGTTCGTGCGAGGGAGATTTGGGAAGATATTCCAGCAAATGTGCACCTGAATGAGGATTTCAACAATTGCCTAATCGATAGATGGATGAGAATTCTTGAGGATCCTAGTCCAACTAACCTAGATCTGTATTTGCTTATTCACTCTTTGAGTGTTTCTGATTGGTGGGATCTTGAGATGTGCCAAACCTTCAAACTATCAACATACTCTACTTTCCCCAATGCCACCGCCGCCGCCGCCGGCCATGCTCTGCCGTAG MFKDPWIPRISTFRPICTDLSFFNQKVSDFMEMSGNWRLEKLKQCVLQEDIEIIRRIPTNLSIKDNIIWHYDRLGTYTVKSGYKLFMNNKINEMSSSNNTLEKMWNKFWKIKVPAKIKHLGWKALNEILPTKINLKNRGIDIQTNCPVCVNSSESTDHILFTCVRAREIWEDIPANVHLNEDFNNCLIDRWMRILEDPSPTNLDLYLLIHSLSVSDWWDLEMCQTFKLSTYSTFPNATAAAAGHALP Homology
BLAST of Lcy06g015410 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.5e-34 Identity = 75/206 (36.41%), Postives = 117/206 (56.80%), Query Frame = 0
BLAST of Lcy06g015410 vs. ExPASy TrEMBL
Match: A0A803PVI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 8.3e-28 Identity = 64/170 (37.65%), Postives = 98/170 (57.65%), Query Frame = 0
BLAST of Lcy06g015410 vs. ExPASy TrEMBL
Match: A3BM56 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_25114 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27 Identity = 58/180 (32.22%), Postives = 102/180 (56.67%), Query Frame = 0
BLAST of Lcy06g015410 vs. ExPASy TrEMBL
Match: Q0D4Q0 (Os07g0613900 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0613900 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.2e-27 Identity = 58/180 (32.22%), Postives = 102/180 (56.67%), Query Frame = 0
BLAST of Lcy06g015410 vs. ExPASy TrEMBL
Match: M5XJH9 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa023013mg PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.7e-26 Identity = 65/179 (36.31%), Postives = 99/179 (55.31%), Query Frame = 0
BLAST of Lcy06g015410 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 155.2 bits (391), Expect = 7.2e-34 Identity = 75/206 (36.41%), Postives = 117/206 (56.80%), Query Frame = 0
BLAST of Lcy06g015410 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis]) HSP 1 Score: 137.5 bits (345), Expect = 1.6e-28 Identity = 70/199 (35.18%), Postives = 110/199 (55.28%), Query Frame = 0
BLAST of Lcy06g015410 vs. NCBI nr
Match: XP_030505522.1 (uncharacterized protein LOC115720515 [Cannabis sativa]) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-27 Identity = 64/174 (36.78%), Postives = 99/174 (56.90%), Query Frame = 0
BLAST of Lcy06g015410 vs. NCBI nr
Match: EAZ40645.1 (hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]) HSP 1 Score: 132.1 bits (331), Expect = 6.5e-27 Identity = 58/180 (32.22%), Postives = 102/180 (56.67%), Query Frame = 0
BLAST of Lcy06g015410 vs. NCBI nr
Match: XP_017250619.1 (PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]) HSP 1 Score: 132.1 bits (331), Expect = 6.5e-27 Identity = 70/171 (40.94%), Postives = 95/171 (55.56%), Query Frame = 0
BLAST of Lcy06g015410 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 96.7 bits (239), Expect = 2.8e-20 Identity = 60/196 (30.61%), Postives = 96/196 (48.98%), Query Frame = 0
BLAST of Lcy06g015410 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 4.2e-16 Identity = 48/150 (32.00%), Postives = 76/150 (50.67%), Query Frame = 0
BLAST of Lcy06g015410 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 49.3 bits (116), Expect = 5.2e-06 Identity = 25/55 (45.45%), Postives = 30/55 (54.55%), Query Frame = 0
BLAST of Lcy06g015410 vs. TAIR 10
Match: AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 43.1 bits (100), Expect = 3.7e-04 Identity = 24/77 (31.17%), Postives = 36/77 (46.75%), Query Frame = 0
BLAST of Lcy06g015410 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 43.1 bits (100), Expect = 3.7e-04 Identity = 19/58 (32.76%), Postives = 31/58 (53.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|