Lcy06g014860 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g014860
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr06: 30911032 .. 30914130 (-)
RNA-Seq ExpressionLcy06g014860
SyntenyLcy06g014860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTATTAGAACCTTTGTTAGATTTTTGTGGGGATCAAGTGAAAATAAAAAGAAAATGCATTGGTGTAAGTGGGCAAAAGGTCTGCCTTCCAAAAAGTTTAGGGGGATTAAACTTTAGAGATGTGGAGGGATTCAATCAAGCTCTCCTAGCCAAACAAGTATGGAGGATTGTATCTAATCCAAACTCTCTAGTATCTCAATTGCTTAAAAGCATTTACTTTAAAGACACGGATATAATGAATGCTTTTGTTGGGAGAAAACCATCTTATGTATGGAAAAACATTATGTGGGGTCGGGAGTTGTTAGAGAAGGGAATAAGGAGTAGAGTGGGGAATGGCTCTTCCATATATATGTTTAAAGATCCTTGGATCCCAAGAGAATCTACTTTTAAAACTACATGCACTAATATGGAGGTTTTCAATGAAAAGGTAGTTGATTTTATTGATCAGACAGGAGCATGGAATATTAATAAACTTAAAAACCTTGTTATGGCTGAAGATAATGAGATTATAAAGAGAGTGCCCATCAATGTGAATCTAAGGGATAGACTAATCTGGCATTATGATCGGACAGGAAAATATTCAGTGAAAAGCAGTTATAAATTGTACATGAAAAGCGGTTATAAATTGTACATCAACTCTAAGATAAATGAGGCTTCTTCTAGTAGAAATATCCTAGGAAATGTTTGGAGTAATTTGTGGAAACTAAGGATCCCAAATAAGATAAAACATTTCTGTTGGAAGGCTTTAAACGAATTTTTACCTACTAGACTAAATGACGGGACTTGTCGAAGGTCCAGATCAAAGCAAATTTATAATCCGCGATCACTAAACTACTTGCAGTAGTAGTGGTCAGGGTCGATCACAGGGAGTGGCGTTTGGTTATTTATTTCCTATTTACCTTGAGTTTGAAAGTAGTAAAAAAAGGGGGGATTGCATAAGAATGAATTTAACATGCAAGAAATCTAAAGGTAGGAATTTAAATATCATAAAATTTAAAGACAAGAAACTAAATTGCAAGAAACATAAATTAGCAAAGAAATCAATTAAACTAACGACACCGATTAGGGAGATTCTTGGGGGTTGAATGGTTTACTTTGATCATTGTCTTCCTACCTATTTTAAGGCTAACTTAACTTGTTTAATTGCCCAATCGATCTAATCTGAACCCAAAAAAGACCCTAAGCCCACCTAAGCCATCTAGTTCGATCATACACCGTCCATCGAATTAGACCCTAATTGATTAACTAATTAATTCGATTTAACCATCAAATCATACAATCAACCAATTGCCTTAAGTCTAGTGGATTGATTAGGACATTAGAAATAATTAGGCCTTCTAATGCTATTTTGGATTCTAGACCTATCGTGTCAAGCAACAAAGTCAGAGAACTGCTCTTGGGACCCCTGCCCACGAATCGGTCTATGTGCTAACTATTGAACTAACTATCCATTAGCTACTTGGAAATCAGTTCTTTAGCATATTATTAACATACGAGCTGCGAGTTAGGGTGTCAATCTAACTTACTGCGCATGCTAATTTTACATACCGAATCCAAAATACAATAGCAATATAAAATTAAAGAAGCAATCAGAACATGAAACTCACAAAGAAACACATTCTATAACCCAAGAATCATCCAATTGGTGTCAACGGGTTTAGATGACGGTAAAGCCAACTAAAACCCGTGACCCTATGCAATAATAATGAAGAAATACAAGAGAAATCGGTAAGAAACATACACTACAAAGGTCTAGTCGTGCAAGATAGAGAAGAACCGAAAAAGGGACCAAAAATTACAACCAAAATCTCTCTTTTACGACGGAACAAAACGAGGGTTTATATAGAAAATTAATCGTGGCGTTGAGACGTTGGGCATGGCATCTCGACGCCATGTCGTCTGGGCCTAGGGTTCAAGAACGGGCCAGCGTCTCGACGCTGGCCACGACGTCTCGACGCTTGGCCTTTGTCCATTATGCCTTCATTCTTTTATTGGTCTTCTTTGTTACTTGCTCGACTTGGGACTCGAACCTTTGACTCCTTGGAACCATTCTTCGGGCTCGTCACGATCCTCACGGTCTTCTCACCTTCTCGAGATCCATGGACTTCAACTTAGCTCGAAAACTCTCTAAATCGCCCGAATTAGCTCCAATTTGTGTAGTTCGTCCCTGATGCCCTTAATGCACAAATAATCTACAAAATAGACAAATAAAGCGTAAAGTGCACTCTAATAGGCTTAGATTAATAAAAAATAAATAGGACTAATTTGGTCCTATCACTAAACCTTAGGAACAGAGGAATTGATTTTCCTGTAATTTGTCCTGTTTGCTCAAACAAAACCGAATCTATAGATCACATTATTTTTTATTGCAGTCGGGCTAGAGAGATTTGGAGGTTGACTTACAATCGAGTGTACCTGGAATAAGATTTTAACAATTGCTTGATGGATCGATGGCTGAAAAATAAATGATTTTGCATCGTTAGCGGAGCTGGAATTGATTGCAGTCACAAGCTGGTCAATTTGGAGCGACATAAACAAGAAGGTTCATGGTCAGAGTATTCTGCCAATTAATACGAAAAGCAGCTGGATAAATAATTATTTAAAGGATTTTCAGGATGCAAACTCAAGAAGAGCTGAAAATTTACCTCTGAGAAGAAATCTCGAGCCGAAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCTGTCAACAGGGTTGGGGGCAATTATCAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGAAGAAGTGATGGCAATCTTCGAAGGAGTATCGCTTGCTAAGTCTTTGGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGAAATTAATTTGGTGGCAAAGAAAATTGAAGTCTGGGGTGAGGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAATTAAGAGGGCTAGGAATGCTTAA

mRNA sequence

ATGAGATTATTAGAACCTTTGTTAGATTTTTGTGGGGATCAAGTGAAAATAAAAAGAAAATGCATTGGTGTAAGTGGGCAAAAGGTCTGCCTTCCAAAAAGTTTAGGGGGATTAAACTTTAGAGATGTGGAGGGATTCAATCAAGCTCTCCTAGCCAAACAAGTATGGAGGATTGTATCTAATCCAAACTCTCTAGTATCTCAATTGCTTAAAAGCATTTACTTTAAAGACACGGATATAATGAATGCTTTTGTTGGGAGAAAACCATCTTATGTATGGAAAAACATTATGTGGGGTCGGGAGTTGTTAGAGAAGGGAATAAGGAGTAGAGTGGGGAATGGCTCTTCCATATATATGTTTAAAGATCCTTGGATCCCAAGAGAATCTACTTTTAAAACTACATGCACTAATATGGAGGTTTTCAATGAAAAGGTAGTTGATTTTATTGATCAGACAGGAGCATGGAATATTAATAAACTTAAAAACCTTGTTATGGCTGAAGATAATGAGATTATAAAGAGAGTGCCCATCAATGTGAATCTAAGGGATAGACTAATCTGGCATTATGATCGGACAGGAAAATATTCAGTGAAAAGCAGTTATAAATTGTACATGAAAAGCGGTTATAAATTGTACATCAACTCTAAGATAAATGAGGCTTCTTCTAGTAGAAATATCCTAGGAAATACCTATCGTGTCAAGCAACAAAGTCAGAGAACTGCTCTTGGGACCCCTGCCCACGAATCGGATGCAAACTCAAGAAGAGCTGAAAATTTACCTCTGAGAAGAAATCTCGAGCCGAAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCTGTCAACAGGGTTGGGGGCAATTATCAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGAAGAAGTGATGGCAATCTTCGAAGGAGTATCGCTTGCTAAGTCTTTGGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGAAATTAATTTGGTGGCAAAGAAAATTGAAGTCTGGGGTGAGGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAATTAAGAGGGCTAGGAATGCTTAA

Coding sequence (CDS)

ATGAGATTATTAGAACCTTTGTTAGATTTTTGTGGGGATCAAGTGAAAATAAAAAGAAAATGCATTGGTGTAAGTGGGCAAAAGGTCTGCCTTCCAAAAAGTTTAGGGGGATTAAACTTTAGAGATGTGGAGGGATTCAATCAAGCTCTCCTAGCCAAACAAGTATGGAGGATTGTATCTAATCCAAACTCTCTAGTATCTCAATTGCTTAAAAGCATTTACTTTAAAGACACGGATATAATGAATGCTTTTGTTGGGAGAAAACCATCTTATGTATGGAAAAACATTATGTGGGGTCGGGAGTTGTTAGAGAAGGGAATAAGGAGTAGAGTGGGGAATGGCTCTTCCATATATATGTTTAAAGATCCTTGGATCCCAAGAGAATCTACTTTTAAAACTACATGCACTAATATGGAGGTTTTCAATGAAAAGGTAGTTGATTTTATTGATCAGACAGGAGCATGGAATATTAATAAACTTAAAAACCTTGTTATGGCTGAAGATAATGAGATTATAAAGAGAGTGCCCATCAATGTGAATCTAAGGGATAGACTAATCTGGCATTATGATCGGACAGGAAAATATTCAGTGAAAAGCAGTTATAAATTGTACATGAAAAGCGGTTATAAATTGTACATCAACTCTAAGATAAATGAGGCTTCTTCTAGTAGAAATATCCTAGGAAATACCTATCGTGTCAAGCAACAAAGTCAGAGAACTGCTCTTGGGACCCCTGCCCACGAATCGGATGCAAACTCAAGAAGAGCTGAAAATTTACCTCTGAGAAGAAATCTCGAGCCGAAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCTGTCAACAGGGTTGGGGGCAATTATCAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGAAGAAGTGATGGCAATCTTCGAAGGAGTATCGCTTGCTAAGTCTTTGGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGAAATTAATTTGGTGGCAAAGAAAATTGAAGTCTGGGGTGAGGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAATTAAGAGGGCTAGGAATGCTTAA

Protein sequence

MRLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPINVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINSKINEASSSRNILGNTYRVKQQSQRTALGTPAHESDANSRRAENLPLRRNLEPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRARNA
Homology
BLAST of Lcy06g014860 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.4e-23
Identity = 55/129 (42.64%), Postives = 82/129 (63.57%), Query Frame = 0

Query: 2   RLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPK-SLGGLNFRDVEGFNQALLAKQVWRIVS 61
           +L   + +F     + KRK   V+ QK+C  K   GGL FRD+  FNQALLAKQ +RI+ 
Sbjct: 20  KLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIH 79

Query: 62  NPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMF 121
            P++L+S+LL+S YF  + +M   VG +PSY W++I+ GRELL +G+   +G+G    ++
Sbjct: 80  QPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVW 139

Query: 122 KDPWIPRES 130
            D WI  E+
Sbjct: 140 LDRWIMDET 148

BLAST of Lcy06g014860 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.0e-12
Identity = 51/193 (26.42%), Postives = 92/193 (47.67%), Query Frame = 0

Query: 18  KRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKD 77
           K+K   V   KVC PK  GGL  R  +  N+AL++K  WR++   NSL + +L+  Y   
Sbjct: 81  KKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVG 140

Query: 78  TDIMNAFVGRKPSY--VWKNIMWG-RELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTT 137
               + ++  K S+   W++I  G R+++  G+    G+G  I  + D W+  +   +  
Sbjct: 141 EIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELD 200

Query: 138 CTNMEVFNEKVV--DFIDQTGAWNINKLKNLVMAEDNEIIKRVPINV--NLRDRLIWHYD 197
                   + VV  D       W+  K+           ++ V +++    RDRL W + 
Sbjct: 201 NGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFS 260

Query: 198 RTGKYSVKSSYKL 204
           + G++SV+S+Y++
Sbjct: 261 QDGQFSVRSAYEM 273

BLAST of Lcy06g014860 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-49
Identity = 100/214 (46.73%), Postives = 134/214 (62.62%), Query Frame = 0

Query: 19   RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDT 78
            RK   +   ++C PK  GGLNFRD+EGFNQAL+AK VWR + +PN LVS++LK  YFKDT
Sbjct: 927  RKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKDT 986

Query: 79   DIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTTCTNM 138
             ++ A    K SY WK  +WGR+LL KG+R RVGNGS+I  F DPW+PR +TFK    N 
Sbjct: 987  SLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNN 1046

Query: 139  EVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSV 198
               +  V  FI   G W++  + +    ED ++I  +PI + NL+D  +WHYD+ G YSV
Sbjct: 1047 GALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSV 1106

Query: 199  KSSYKLYMKSGYKLYINSKINEASSSRNILGNTY 232
                    +SGYKLY++ K N  S+S N  G  +
Sbjct: 1107 --------RSGYKLYMHLKCNATSASTNYRGTQW 1132

BLAST of Lcy06g014860 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.6e-46
Identity = 91/191 (47.64%), Postives = 132/191 (69.11%), Query Frame = 0

Query: 19  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDT 78
           +K   +S +++CLPK LGGLNFRD+EGFNQAL+AKQVWR++ NPN LVS++LK+ YF D+
Sbjct: 59  KKLHWMSWERMCLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNILVSRVLKAKYFHDS 118

Query: 79  DIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTTCTNM 138
            ++ A   R  SY WK  +WGR+LL KG+RSRVGNGS+I +F DPWIPR  +F+      
Sbjct: 119 LVLQATHLRNQSYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRPITAPF 178

Query: 139 EVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPIN-VNLRDRLIWHYDRTGKYSV 198
             ++ KV D I+  G W+++ +  +   ED ++I  +P++  N  D  IWH+D+ G Y+V
Sbjct: 179 GPYDVKVADLINPNGQWDVHLISYIFCEEDRDLILSMPVSPYNSVDSWIWHFDKRGHYNV 238

Query: 199 KSSY-KLYMKS 208
           KS    +Y++S
Sbjct: 239 KSVINSIYIRS 249

BLAST of Lcy06g014860 vs. ExPASy TrEMBL
Match: A0A6J5TGK7 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2532 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-43
Identity = 136/465 (29.25%), Postives = 204/465 (43.87%), Query Frame = 0

Query: 7    LLDFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLV 66
            +  F   +VK KR    V  + +C  K  GGL FRD+E FNQALL KQ   I+  P SLV
Sbjct: 1215 MAQFWWARVKDKRGIDWVKWEMLCKSKFAGGLGFRDLEAFNQALLTKQCQCIIQTPESLV 1274

Query: 67   SQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIP 126
            +++ ++ Y      + A VG  PS++W+++ WG+ELL KG+R RVGNG SI ++ + W+P
Sbjct: 1275 ARIFRARYHPSAPFLEAGVGTNPSFIWRSLQWGKELLNKGLRWRVGNGESIQVYTNKWLP 1334

Query: 127  RESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVP-INVNLRDRL 186
              S FK         +  V D    +G WN+  LK++   ++ E I ++P +++   D L
Sbjct: 1335 VPSFFKIMSAPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVEAILQIPLVSLASHDCL 1394

Query: 187  IWHYDRTGKYSVKSSYKL---------------------YMKSGYKLYINSKIN------ 246
            IWHY+R G YSVKS Y+L                     + K  + L I +KI       
Sbjct: 1395 IWHYERNGMYSVKSGYQLTRLEKDIMCGESSAGVNLSSRFWKKIWALKIPNKIKFFLWRR 1454

Query: 247  -----------EASSSRNILGNTYRVKQQSQRTALGTPAHES------------DANSRR 306
                       E S   +     Y V+  S     G  A+              +A S  
Sbjct: 1455 CGATQLGGNVCEVSRVNSFRELWYAVQISSGGEEQGLFAYLRWGLWNWRDSLIFEAKSET 1514

Query: 307  AENLPLRRNL----------------------EPKLHCWIPPSGNMWKVNVDAAWTSSPL 366
            A  L  R +                       +  LH W PP+  ++K+NVD A  S   
Sbjct: 1515 ATQLLHRMHTLAQEFFDVNNSSHTSHGRQSSPQASLHVWRPPAVGIYKINVDRALKSGDS 1574

Query: 367  STGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQ 399
              G+G ++R+  G+   A    ++  Y A   E+MA  EG+  A  +G  + ++E D   
Sbjct: 1575 IRGVGVVVRNENGDFMAACVRRIQASYGARQMELMATIEGLRFAIDMGFTDAVLEMDAQD 1634

BLAST of Lcy06g014860 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.4e-42
Identity = 139/502 (27.69%), Postives = 205/502 (40.84%), Query Frame = 0

Query: 14   QVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSI 73
            + K KR    V  + +C  K  GGL FRD+E FNQALLAKQ WRI+  P SLV+++ ++ 
Sbjct: 761  KAKDKRGIHWVKWELLCKSKFAGGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRAR 820

Query: 74   YFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKT 133
            Y      + A VG  PS++W+++ WG+ELL KG+R RVGNG SI ++ D W+P  S FK 
Sbjct: 821  YHPSVPFLEAEVGTNPSFIWRSLQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKI 880

Query: 134  TCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRT 193
                    +  V D    +G WN+  LK++   ++ +   ++P+ ++   D LIWHY+R 
Sbjct: 881  MSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERN 940

Query: 194  GKYSVKSSYKL---------------------YMKSGYKLYINSKI-------------- 253
            G YSVKS Y+L                     + K  + L I +KI              
Sbjct: 941  GMYSVKSGYRLACLEKDKMSGEPSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPC 1000

Query: 254  -----NEASSSRNILGNTYR--------------VKQQSQRTALGTPAHESDANSRR--- 313
                 N   +   I  N +R               K+  + +A G    E   NS R   
Sbjct: 1001 GQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELW 1060

Query: 314  ------------------------------------------------AENLPLRRNL-- 373
                                                            A+      NL  
Sbjct: 1061 HALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLSH 1120

Query: 374  ---------EPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAFSV 399
                     +  LH W PP   ++K+NVD A  S     G+G ++R++ G    A    +
Sbjct: 1121 TIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDSVRGVGVVVRNANGEFMAACVRRI 1180

BLAST of Lcy06g014860 vs. ExPASy TrEMBL
Match: A0A803QCV6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-41
Identity = 119/420 (28.33%), Postives = 208/420 (49.52%), Query Frame = 0

Query: 18   KRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKD 77
            KRK      +K+C PK  G + F+D+E FNQALLAKQ W+I++NP S+++++LK+ Y+ +
Sbjct: 895  KRKIHWGKWKKLCKPKDEGRMGFKDLEKFNQALLAKQGWKIINNPQSMLARVLKACYYTN 954

Query: 78   TDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTTCTN 137
            +  + A +G   S++W++I+WGR+++EKG+R R+ +G  I + +D WIPR STF T  + 
Sbjct: 955  SSFLEAKIGGYGSFMWRSIIWGRKIIEKGVRWRIISGRGIRINEDKWIPRPSTF-TLRSK 1014

Query: 138  MEVFNEKVVDFI-DQTGAWNINKLKNLVMAEDNEIIKRV-PINVNLRDRLIWHYDRTGKY 197
              V     +D++ +  G+W    ++    ++D  +I  + P + +  D LIWH+   G Y
Sbjct: 1015 ATVPQGTTLDYLKNADGSWKTTIVEYCFHSDDIPMILGIAPCSTSKNDDLIWHFTPNGNY 1074

Query: 198  SVKSSYKLYMKSGYKLYINSKINEASSSRNILGNTYRVKQQ-SQRTALGTPAHESDANSR 257
            +V S  K   K   K    +  +E   ++N     ++++      T+ G  A       R
Sbjct: 1075 TVSSGCKEASKDEMK----AGPSETELTKNWWKGIWKIEAPLRSETSYGECAMSGSLLIR 1134

Query: 258  RAE-------------------------NLPLRRN----LEPKLHCWIPPSGNMWKVNVD 317
              +                         N+PL+ +     E  L  W  P  N + +N D
Sbjct: 1135 NKKHLNIQLPPGEIWIKWAQLEIDFIMNNIPLKDHSSTPQEISLIGWEGPPANSFCINSD 1194

Query: 318  AAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEI 377
            A+  S+  S GLGA+IR++ G++        +  Y   + EV+A+  G+ LA        
Sbjct: 1195 ASLNSTDPSIGLGALIRNTSGDVIATEIQQQQGSYSVELAEVLALRMGIQLAIHTAAVPF 1254

Query: 378  IVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRA 406
            I+++DC +  N +    +V  +    LE I D  +F + +   +  R++N  A  + K A
Sbjct: 1255 IIQTDCVRAANFLKGSSQVKTDWSALLEEIKDSPSFSNCLAVHHIGRQRNKAAHSLAKSA 1309

BLAST of Lcy06g014860 vs. NCBI nr
Match: XP_023880941.1 (uncharacterized protein LOC111993328 [Quercus suber])

HSP 1 Score: 205.7 bits (522), Expect = 7.7e-49
Identity = 138/421 (32.78%), Postives = 214/421 (50.83%), Query Frame = 0

Query: 9   DFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQ 68
           +F   Q   +RK + V+ +K+C PK  GGL FRD+  FN ALLAKQ WRI  N NSL  +
Sbjct: 274 NFWWGQKNKERKLVWVAWEKLCTPKEEGGLGFRDLRAFNLALLAKQGWRIQQNTNSLAHK 333

Query: 69  LLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRE 128
           +LK+ YF D     A +GR+PSY+W++IM  +E++E G R  +GNG  + ++KD WIP  
Sbjct: 334 VLKAKYFADRTFKEAQLGRRPSYIWRSIMAAKEIVEMGSRWLIGNGEHVDIWKDRWIPTP 393

Query: 129 STFKTTCTNMEVFNEKVVDFID-QTGAWNINKLKNLVMAEDNEIIKRVPINV-NLRDRLI 188
            +FK     + + ++KV   +D  TG+W+++K+++  +  + E I  + I+   L D LI
Sbjct: 394 DSFKLVSPKVHLDSDKVACLLDASTGSWDVDKVRHSFLPYEAEAILGISISPRRLNDSLI 453

Query: 189 WHYDRTGKYSVKSSYKLYMK--SGYKLYINSKI----------------NEASSSRNILG 248
           W   + GK+SVKS+YK+  K   G    +   I                + A ++ ++  
Sbjct: 454 WARTKNGKFSVKSAYKVAQKWLKGRSTKMQEFIEVVWEIKERKPDIEWESFAVTAWSLWN 513

Query: 249 NTYRVKQQSQ-RTALGTPAHESD-ANSRRAENLPLRRNLEPKLHCWIPPSGNMWKVNVDA 308
           +   VK   + +TA       +D     + ENL   R  +  +  W PP    +KVN D 
Sbjct: 514 HRNAVKHGDKCKTAARITKEIADYLKEIKQENLNPSRPPDVSVPHWSPPRNGWYKVNADG 573

Query: 309 AWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEII 368
           A        G+G +IR++ G + GA +  VK+  KA   E  A+ EGV LA  LG +EI 
Sbjct: 574 AVFKDIGCCGVGIVIRNNKGLLMGALSKLVKLPLKALESEARAVQEGVLLAWDLGLREIE 633

Query: 369 VESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRAR 408
           +ESD    I+ +     V   +   +E +   L  F     V+  R  N  A  + + AR
Sbjct: 634 IESDSLVVISALLNPDAVPWAISKVIEGVLLSLRCFKAWRAVHVRRMGNAAAHIMAREAR 693

BLAST of Lcy06g014860 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 205.3 bits (521), Expect = 1.0e-48
Identity = 100/214 (46.73%), Postives = 134/214 (62.62%), Query Frame = 0

Query: 19   RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDT 78
            RK   +   ++C PK  GGLNFRD+EGFNQAL+AK VWR + +PN LVS++LK  YFKDT
Sbjct: 927  RKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKDT 986

Query: 79   DIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTTCTNM 138
             ++ A    K SY WK  +WGR+LL KG+R RVGNGS+I  F DPW+PR +TFK    N 
Sbjct: 987  SLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNN 1046

Query: 139  EVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSV 198
               +  V  FI   G W++  + +    ED ++I  +PI + NL+D  +WHYD+ G YSV
Sbjct: 1047 GALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSV 1106

Query: 199  KSSYKLYMKSGYKLYINSKINEASSSRNILGNTY 232
                    +SGYKLY++ K N  S+S N  G  +
Sbjct: 1107 --------RSGYKLYMHLKCNATSASTNYRGTQW 1132

BLAST of Lcy06g014860 vs. NCBI nr
Match: XP_015388020.1 (uncharacterized protein LOC107177951 [Citrus sinensis])

HSP 1 Score: 201.1 bits (510), Expect = 1.9e-47
Identity = 125/400 (31.25%), Postives = 203/400 (50.75%), Query Frame = 0

Query: 14   QVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSI 73
            Q++ KR       +++C  K  G L FRD+  FNQAL+AKQ WRI+  P SL+++++K  
Sbjct: 605  QLQEKRSIHWSKWERMCQAKKRGDLGFRDLSSFNQALVAKQSWRIIQAPESLLARVMKEK 664

Query: 74   YFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKT 133
            YF+ +  M A VG  PSY+W++I+WGRE++ KG+R R+ +G  + +++  W+PR  TFK 
Sbjct: 665  YFRHSGFMEAQVGSNPSYIWRSILWGREVIHKGLRWRIRDGKLVKVYQSGWLPRPETFKP 724

Query: 134  TCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRT 193
                    +  V   ID+   W  + ++     ED   I ++P+      D+++WHYD+ 
Sbjct: 725  ISPPSLPLDTTVSVLIDEDHCWRDDAIRKHFHQEDAAQILKIPLPRQPSLDQVLWHYDKK 784

Query: 194  GKYSVKSSYKLYMKSGYKLYINSKINEASSSRNILGNTYRVKQQSQRTALGTPAHESDAN 253
            G YSVKS Y+L ++  +    +S     SS  +I       K + + + L     E+   
Sbjct: 785  GNYSVKSGYQLALQMKFPNRPSSSKEGKSSWSSIWYLQIPEKNKKEDSQLSVAGAEAIVQ 844

Query: 254  SRRAENLP-----LRRNLEPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGN 313
            S +   +P       +NL  + H   PP+G  +KVNVDAA        GLG +IR+S G 
Sbjct: 845  SYKRIQMPQLQAISDQNLASQEHWNCPPAG-WFKVNVDAAVKIDNQRVGLGIVIRNSEGK 904

Query: 314  IAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGE 373
            +  A+    K   +    E  A   G+ +A+  GC  +IVE+D  +  NLV+ +     E
Sbjct: 905  LITAAIKPSKWLDRMDYAEAEATRFGLEVAEIAGCLPLIVETDSKEVSNLVSARKSTKAE 964

Query: 374  VEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRARN 408
            +   +  + + +    +V   +  R  NG A  + K A N
Sbjct: 965  IFWIVSEVQETMERLKHVKLQHLPRTCNGFAHTLAKLALN 1003

BLAST of Lcy06g014860 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia])

HSP 1 Score: 194.9 bits (494), Expect = 1.4e-45
Identity = 91/191 (47.64%), Postives = 132/191 (69.11%), Query Frame = 0

Query: 19  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDT 78
           +K   +S +++CLPK LGGLNFRD+EGFNQAL+AKQVWR++ NPN LVS++LK+ YF D+
Sbjct: 59  KKLHWMSWERMCLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNILVSRVLKAKYFHDS 118

Query: 79  DIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTTCTNM 138
            ++ A   R  SY WK  +WGR+LL KG+RSRVGNGS+I +F DPWIPR  +F+      
Sbjct: 119 LVLQATHLRNQSYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRPITAPF 178

Query: 139 EVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPIN-VNLRDRLIWHYDRTGKYSV 198
             ++ KV D I+  G W+++ +  +   ED ++I  +P++  N  D  IWH+D+ G Y+V
Sbjct: 179 GPYDVKVADLINPNGQWDVHLISYIFCEEDRDLILSMPVSPYNSVDSWIWHFDKRGHYNV 238

Query: 199 KSSY-KLYMKS 208
           KS    +Y++S
Sbjct: 239 KSVINSIYIRS 249

BLAST of Lcy06g014860 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 194.5 bits (493), Expect = 1.8e-45
Identity = 144/491 (29.33%), Postives = 217/491 (44.20%), Query Frame = 0

Query: 27   QKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVG 86
            +K+   K  GGL FR+   FNQAL+AKQ WR++  PNSLVS++L++ YF+++  + A  G
Sbjct: 877  EKLSQAKIRGGLGFREFSCFNQALVAKQAWRLLQYPNSLVSRVLQARYFRNSSFLCAKAG 936

Query: 87   RKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVV 146
               SY+W++IMWGR++++KG+R R+GNG  I +F D W+PR  TF+         +  V 
Sbjct: 937  ANASYIWRSIMWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSVVA 996

Query: 147  DFIDQTGAWNINKLKNLVMAEDNEIIKRVPINV-NLRDRLIWHYDRTGKYSVKSSYKLYM 206
            D I     W+  KL+   +  D   I ++P+      D ++WHYD+ G YSVKS Y+L +
Sbjct: 997  DLIKADNQWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQLAL 1056

Query: 207  KSGY--------------------KLYINSKINEASSSRNIL---GNTYRVKQQSQRTA- 266
            +S +                    +L    KI    +S N+L    N ++ K   + T  
Sbjct: 1057 RSKFPDSTSCTEASHKYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKRKVVEEPTCK 1116

Query: 267  -----------------------LGTP--AHESDANSR-------------RAENLPLR- 326
                                   L +P  A   +ANS+             R  +L L  
Sbjct: 1117 RCKLSVETISHALLECKAARKIWLQSPFSAPRLEANSQDIFSTLQNMAKELRKSDLELMV 1176

Query: 327  -----------------RNLEP-------------------------------KLHCWIP 386
                             R L P                               K   W+P
Sbjct: 1177 ALCWSAWYARNKCIFDGRELNPIISAAKAESVLTAFQRVRKPQQSHISISIKEKQQEWLP 1236

Query: 387  PSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGV 406
            P  N++KVNVDAA+ S  LS G+GA+IRDS G I  A      +   A + E  A+  G+
Sbjct: 1237 PPQNVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLKGSASLAEAEAVLWGL 1296

BLAST of Lcy06g014860 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 5.2e-27
Identity = 63/179 (35.20%), Postives = 104/179 (58.10%), Query Frame = 0

Query: 33  KSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYV 92
           K+ GG+ F+D+E FN ALL KQ+WR++S P SL++++ KS YF  +D +NA +G +PS+V
Sbjct: 51  KAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFV 110

Query: 93  WKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWI---PRESTFKTTCTNMEVFNE-----K 152
           WK+I   +E+L +G R+ VGNG  I +++  W+   P  +  +      + +       K
Sbjct: 111 WKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILK 170

Query: 153 VVDFIDQTG-AWNINKLKNLVMAEDNEIIKRV-PINVNLRDRLIWHYDRTGKYSVKSSY 202
           V D ID++G  W  + ++ L    + ++I  + P    + D   W Y  +G Y+VKS Y
Sbjct: 171 VSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGY 229

BLAST of Lcy06g014860 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 110.9 bits (276), Expect = 2.4e-24
Identity = 55/129 (42.64%), Postives = 82/129 (63.57%), Query Frame = 0

Query: 2   RLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPK-SLGGLNFRDVEGFNQALLAKQVWRIVS 61
           +L   + +F     + KRK   V+ QK+C  K   GGL FRD+  FNQALLAKQ +RI+ 
Sbjct: 20  KLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIH 79

Query: 62  NPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMF 121
            P++L+S+LL+S YF  + +M   VG +PSY W++I+ GRELL +G+   +G+G    ++
Sbjct: 80  QPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVW 139

Query: 122 KDPWIPRES 130
            D WI  E+
Sbjct: 140 LDRWIMDET 148

BLAST of Lcy06g014860 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 3.3e-13
Identity = 44/142 (30.99%), Postives = 79/142 (55.63%), Query Frame = 0

Query: 70  LKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWI---- 129
           +K+ YFKD  I++A V ++ SY W +++ G  LL+KG R  +G+G +I +  D  +    
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60

Query: 130 PRESTFKTTCTNMEVFNEKVVDFIDQTGA---WNINKLKNLVMAEDNEIIKRVPINVNLR 189
           PR    + T   M + N       ++ G+   W+ +K+   V   D+  I R+ +  + +
Sbjct: 61  PRPLNTEETYKEMTINN-----LFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKK 120

Query: 190 -DRLIWHYDRTGKYSVKSSYKL 204
            D++IW+Y+ TG+Y+V+S Y L
Sbjct: 121 PDKIIWNYNTTGEYTVRSGYWL 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932953.4e-2342.64Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F66.0e-1226.42Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A6J1DX304.9e-4946.73uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1BRN06.6e-4647.64uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J5TGK72.3e-4329.25CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS... [more]
A0A5E4FZN94.4e-4227.69PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1[more]
A0A803QCV61.3e-4128.33Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_023880941.17.7e-4932.78uncharacterized protein LOC111993328 [Quercus suber][more]
XP_022158377.11.0e-4846.73uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_015388020.11.9e-4731.25uncharacterized protein LOC107177951 [Citrus sinensis][more]
XP_022131662.11.4e-4547.64uncharacterized protein LOC111004787 [Momordica charantia][more]
XP_024950112.11.8e-4529.33uncharacterized protein LOC112496847 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
AT4G29090.15.2e-2735.20Ribonuclease H-like superfamily protein [more]
ATMG00310.12.4e-2442.64RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G09510.13.3e-1330.99Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 278..407
e-value: 4.0E-11
score: 45.1
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 283..404
e-value: 3.9E-17
score: 62.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..256
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 29..203
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 29..203
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 282..399
e-value: 1.35859E-20
score: 84.6732
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 278..399

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g014860.1Lcy06g014860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity