Lcy06g014120 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g014120
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RAB6-interacting golgin
Location	Chr06: 26432803 .. 26435883 (+)
RNA-Seq Expression	Lcy06g014120
Synteny	Lcy06g014120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAGGTTATTGATTTCAATACACACAATGACATCAATATTTATATCACTTACCATCACAATTTGAAAAAAAAAAAAGAAAAGAAAAGAAGAATTCTTCTCAAAACAGCAGCAAGGCAAGAAGGGTTTGGTGATAGATTCCTTGCAAGGTGCTAAAGAGAGCTGTGATAAGAAAAGGAATGAAATAATAGGAAAAAGAAAAGGAAAAGGTGAGTGAGTGAGAGATCTATCTTGCAAGTAAGCAAAGTAATAATAAGGGGACAAAAAGAGAAGAAGCCTTTTTGCAGTTCTGCTGTTACCCATCTCTCCAACTCAGTCTTGCTTCTTAAGGCTTTTTTCCTCCACAGGGCACAGGCCACATTCTCATTCATTTCATTTCATACTCAGTGCAGGTAACACCTTATTCTCCACTCCAACAGAAAACTTCCATTCCAAGCACCTCCATTTCAATTCCTAGGAAACCCCCAAAAATCATTGCAACAAAACCAATGCCATTCCACTTCTTTGACCCAAAGCAAAAGTAAACTCTCCATCACAATTTGGTAACTCTGTTTGGCAGTTTTCAAATAGCAGGACAAAAACAATAAAATAAAAGAAGTTCTAAAAACAATCTGTAAATTCAGTTCTAATCAATTAGGCGTTTGAGTAAAGATAAGTGTATTTTGGATCCAAATTTGAGAACAGAAACAGCAGAGTGCACAGGTGAAATCTCTCTATTGCTAGACAATTAGGTCAGTTTCAAATGGATTGCGATGTCTGTTGAGAAGTAATAAGCTAAAGGTAAAGCAAATGGAGAGGTTACATACCTTTAAAGCCTTGCGGCGCTTTGCGTATGGCCACCTAACCGAGAAAGAGAATCATCATTCGCGAGAGGCCATGACGACGCCGAGACAGAGTTGGGAGGCGCAACAGTCGCAGATGCAGAGAGTGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGGGATTGGGAGTCCGATGAGGGAGGATCAAGAGGAGGAGCTTTCGAGATCGGCATTCGCAGTGTTCCGAGCGAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCGGCTTGGACGAGCTGAAGAAGCGACGAAGCGATTGGCGGAGATTCGCGAAGTAAGTTTGATCGAGCATTGAGGTTCCATTGATTAGGGTTTGTGGATTTGAAATGGAATGAAATTACAGGAACTTGAAGGAATGGCGGATCCGATGAGGAAAGAAGTTTCGTTTATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGTCAAAAGAAGGTCACGCTTCCCAACTTCATTCCAAATCAATTTCTCTAACTTTTCTTCCTTTCTTCTCTGATCCTACATTACATTACTACTTTTTTTTTTTTTTTCCTTCTTCTTTTTTCTTTTTTCTGAAATACCTACATTACTACTTAGCATGGAACTTTTTCTATCATTTTTTTTTTTAAATTTAAATCTCATTTTAACTCTCAAAACTATTAATTTGGTCTAGTTGATCTTAATCTTTAATCTTTTTAAATGATTCCGATGGAATTTTTGTTAGTTGAACAACCTAGATAGATAACTCTTATAGATAAGGATATAATCTTTAACTAATTGAACGGTACAATTTTCAAAATATTTATTTGATATGCTAATATGTTGACAAAAATTGAAATAGTTATTTTTAAAAAAATTTAGAGACTAAACAGACCTTAATATTAAATTATAAGTTTGACCTTTGCATTTTAAAAAGTGTCTATGTGAGCACACGACTCAATTCGTTTAGCTATATGTCCTCGACCTAATCTCCTACTCCTCCCTGACCGCAAATTGTTGAACTAAGAAATGTCTAATTGGTTTAGTAAAGTTAACCTAAAATAATGTGGAAAGTCTTTTTTTGTAATTTTTTTTTATTGATGTGAGGGGTGACAGATCCCCCGACCTTGTTGGCTAAGGATATAAACTTGTAGCTGAGTTATGTTCTTTTGGTAATAAAGTGGGAAGTTTATAAACCAAAATTACCCGCTAATTGTTATATAATATTATAGTAATATGGCCAAAGCGAGTTTAGCTAATTGGCATGTACCCTCGAACATGAGGTCAGAAGTTCAAATCCCCCACTCCTAAATGTTGATGTACTAAAAAAAAATTATAGTAATATGTGCGCTACTAATATTTTGATTTATTGGTACTCAGGAGAGAGAATACAAAGAAGTCCTAGAGTTATTTAATGAGAAGAACAAAGAGAAGTCTCAATTGATAGCCAAGCTAATGGAGGTCAGTCTTATTTCTTTGCTCTCTATAAAAGCTTATATTACAATTTTGGTTAGTATGTTTTAATCTTTTTCTTACTAGCTAGTATTTGCACTTTTAAAATTATCATTCTTATCTTTTAATCAAACCTTATGAAACATCTCCATTTTTTTTTTCTAATGAAAATTAAACATCTTTGTTGATAATAAAAACTAATCAAAATATAACGTACAATGTTAATAGATATGACAAGTGAACGATATGAATGTGATATTTTGTTTTAATAATGTGGAATTTGGTAGGATACTTCAATTGGAAAATATGAATTTAGATAAAATTTTATGATATTATTTGATTGGATAGTAGAGGGAGAACTAAAGCCAACCTCTTATGGGCTTAATTAATCTATAATATCATTGGATGAATTTATATAACAAGAACATAATCACAAATAACAACTTATTAACTTGAAATAATAGCTAGAGATATTAGGTAAACTTCAATGAAAGAGTAACATTATTGAAGAATCTTATTTTATTAAAAAAAAAAAAAAATTGGTATGAAATATTATATTTGAATACTAACATATTTTTATGAATAATTTGGTCAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATACTTCATTAAGAAAAGTGTGTTCTTCTAACTCAAAATAACCAACTTTGTTTGTATTTCAACATTTTGTTTCTCCTTCTCAATATATATATATATATATATATATATATATATATATATAT

mRNA sequence

AAAAAAAAAAAGGTTATTGATTTCAATACACACAATGACATCAATATTTATATCACTTACCATCACAATTTGAAAAAAAAAAAAGAAAAGAAAAGAAGAATTCTTCTCAAAACAGCAGCAAGGCAAGAAGGGTTTGGTGATAGATTCCTTGCAAGGTGCTAAAGAGAGCTGTGATAAGAAAAGGAATGAAATAATAGGAAAAAGAAAAGGAAAAGGTGAGTGAGTGAGAGATCTATCTTGCAAGTAAGCAAAGTAATAATAAGGGGACAAAAAGAGAAGAAGCCTTTTTGCAGTTCTGCTGTTACCCATCTCTCCAACTCAGTCTTGCTTCTTAAGGCTTTTTTCCTCCACAGGGCACAGGCCACATTCTCATTCATTTCATTTCATACTCAGTGCAGGTAACACCTTATTCTCCACTCCAACAGAAAACTTCCATTCCAAGCACCTCCATTTCAATTCCTAGGAAACCCCCAAAAATCATTGCAACAAAACCAATGCCATTCCACTTCTTTGACCCAAAGCAAAAGTAAACTCTCCATCACAATTTGGTAACTCTGTTTGGCAGTTTTCAAATAGCAGGACAAAAACAATAAAATAAAAGAAGTTCTAAAAACAATCTGTAAATTCAGTTCTAATCAATTAGGCGTTTGAGTAAAGATAAGTGTATTTTGGATCCAAATTTGAGAACAGAAACAGCAGAGTGCACAGGTGAAATCTCTCTATTGCTAGACAATTAGGTCAGTTTCAAATGGATTGCGATGTCTGTTGAGAAGTAATAAGCTAAAGGTAAAGCAAATGGAGAGGTTACATACCTTTAAAGCCTTGCGGCGCTTTGCGTATGGCCACCTAACCGAGAAAGAGAATCATCATTCGCGAGAGGCCATGACGACGCCGAGACAGAGTTGGGAGGCGCAACAGTCGCAGATGCAGAGAGTGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGGGATTGGGAGTCCGATGAGGGAGGATCAAGAGGAGGAGCTTTCGAGATCGGCATTCGCAGTGTTCCGAGCGAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCGGCTTGGACGAGCTGAAGAAGCGACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGGCGGATCCGATGAGGAAAGAAGTTTCGTTTATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGTCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGAGTTATTTAATGAGAAGAACAAAGAGAAGTCTCAATTGATAGCCAAGCTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATACTTCATTAAGAAAAGTGTGTTCTTCTAACTCAAAATAACCAACTTTGTTTGTATTTCAACATTTTGTTTCTCCTTCTCAATATATATATATATATATATATATATATATATATATATAT

Coding sequence (CDS)

ATGGAGAGGTTACATACCTTTAAAGCCTTGCGGCGCTTTGCGTATGGCCACCTAACCGAGAAAGAGAATCATCATTCGCGAGAGGCCATGACGACGCCGAGACAGAGTTGGGAGGCGCAACAGTCGCAGATGCAGAGAGTGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGGGATTGGGAGTCCGATGAGGGAGGATCAAGAGGAGGAGCTTTCGAGATCGGCATTCGCAGTGTTCCGAGCGAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCGGCTTGGACGAGCTGAAGAAGCGACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGGCGGATCCGATGAGGAAAGAAGTTTCGTTTATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACCTGTCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGAGTTATTTAATGAGAAGAACAAAGAGAAGTCTCAATTGATAGCCAAGCTAATGGAGTTGGTGAATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATACTTCATTAA

Protein sequence

MERLHTFKALRRFAYGHLTEKENHHSREAMTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

Homology

[Close]

BLAST of Lcy06g014120 vs. ExPASy TrEMBL
Match: A0A6J1CNF1 (RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.9e-76
Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 30  MTTPRQSWE--AQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEI 89
           MTT +QSWE  AQQSQMQRV+NSGMI SHVN IGSP++EDQ+EELSRSAFA+FRAKEEEI
Sbjct: 1   MTTQKQSWEAQAQQSQMQRVRNSGMI-SHVNAIGSPLKEDQDEELSRSAFALFRAKEEEI 60

Query: 90  ERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPL 149
           ERKKMEMRDKVEARLGRAEEATKRLAEIREELE MADPMRKEVSFIRKKIDLVNKELKPL
Sbjct: 61  ERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPL 120

Query: 150 GLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           GLTCQKKEREYKEVLELFNEKN+EKSQL+AKLMELVNESEKLRMKKLEELSKNIDILH
Sbjct: 121 GLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 177

[Close]

BLAST of Lcy06g014120 vs. ExPASy TrEMBL
Match: A0A5D3CH78 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001010 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 159/177 (89.83%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIE 89
           MTT +QSWEAQ  QMQRVKNSGMISS+V NGIGSP++EDQEEE+SRSA A+FRAKEEEIE
Sbjct: 1   MTTQKQSWEAQ--QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIE 60

Query: 90  RKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLG 149
           RKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 120

Query: 150 LTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           LTCQKKEREYKEVL+LFNEKN+EKSQL++KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 121 LTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of Lcy06g014120 vs. ExPASy TrEMBL
Match: A0A1S3CFV6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 159/177 (89.83%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIE 89
           MTT +QSWEAQ  QMQRVKNSGMISS+V NGIGSP++EDQEEE+SRSA A+FRAKEEEIE
Sbjct: 1   MTTQKQSWEAQ--QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIE 60

Query: 90  RKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLG 149
           RKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 120

Query: 150 LTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           LTCQKKEREYKEVL+LFNEKN+EKSQL++KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 121 LTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of Lcy06g014120 vs. ExPASy TrEMBL
Match: A0A0A0LY59 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 159/177 (89.83%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQMQRVKNSGMISSHVNG--IGSPMREDQEEELSRSAFAVFRAKEEEI 89
           MTT +QSWEAQ  QMQRVKNSGMISS+VN   IGSP++EDQEEE+SRSA A+FRAKEEEI
Sbjct: 1   MTTQKQSWEAQ--QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEI 60

Query: 90  ERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPL 149
           ERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRKEVSFIRKKIDLVNKELKPL
Sbjct: 61  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 120

Query: 150 GLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDIL 205
           GLTCQKKEREYKEVL+LFNEKNKEKSQL++KLMELVNESEKLRMKKLEELSKNIDIL
Sbjct: 121 GLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of Lcy06g014120 vs. ExPASy TrEMBL
Match: A0A6J1EPU7 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111436527 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.8e-67
Identity = 153/177 (86.44%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQM-QRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIE 89
           MTT +QSWEAQQSQM QRVK +         IGSP REDQEEELSRSA A+FRAKEEEIE
Sbjct: 1   MTTQKQSWEAQQSQMQQRVKKA---------IGSPAREDQEEELSRSALALFRAKEEEIE 60

Query: 90  RKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLG 149
           RKKMEMR+KVE RLGRAEEATKRLAEIREELEGM DPMRKEVS IRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLG 120

Query: 150 LTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           +TCQKKEREYKEVLEL NEKNKEKSQLIAKLMELVNESEKLRMKKLEELS NIDILH
Sbjct: 121 ITCQKKEREYKEVLELLNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSNNIDILH 168

[Close]

BLAST of Lcy06g014120 vs. NCBI nr
Match: XP_038893849.1 (uncharacterized protein LOC120082661 [Benincasa hispida])

HSP 1 Score: 294.7 bits (753), Expect = 6.3e-76
Identity = 165/178 (92.70%), Postives = 173/178 (97.19%), Query Frame = 0


Query: 30  MTTPRQSWEAQQS-QMQRVKNSG-MISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEI 89
           MTTP+QSWEAQQS QMQRVKNSG MISS+VN IGSP++EDQEEE+SRSA AVFRAKEEEI
Sbjct: 1   MTTPKQSWEAQQSQQMQRVKNSGVMISSNVNAIGSPVKEDQEEEISRSALAVFRAKEEEI 60

Query: 90  ERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPL 149
           ERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRKEVSFIRKKIDLVNKELKPL
Sbjct: 61  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 120

Query: 150 GLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           GLTCQKKEREYKEVL+LFNEKNKEKSQL+AKLMELVNESEKLRMKKLEELSKNIDILH
Sbjct: 121 GLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 178

[Close]

BLAST of Lcy06g014120 vs. NCBI nr
Match: XP_022142637.1 (uncharacterized protein LOC111012700 [Momordica charantia])

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 30  MTTPRQSWE--AQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEI 89
           MTT +QSWE  AQQSQMQRV+NSGMI SHVN IGSP++EDQ+EELSRSAFA+FRAKEEEI
Sbjct: 1   MTTQKQSWEAQAQQSQMQRVRNSGMI-SHVNAIGSPLKEDQDEELSRSAFALFRAKEEEI 60

Query: 90  ERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPL 149
           ERKKMEMRDKVEARLGRAEEATKRLAEIREELE MADPMRKEVSFIRKKIDLVNKELKPL
Sbjct: 61  ERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKPL 120

Query: 150 GLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           GLTCQKKEREYKEVLELFNEKN+EKSQL+AKLMELVNESEKLRMKKLEELSKNIDILH
Sbjct: 121 GLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 177

[Close]

BLAST of Lcy06g014120 vs. NCBI nr
Match: XP_008461743.1 (PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >KAA0040914.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa] >TYK10622.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa])

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-73
Identity = 159/177 (89.83%), Postives = 171/177 (96.61%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIE 89
           MTT +QSWEAQ  QMQRVKNSGMISS+V NGIGSP++EDQEEE+SRSA A+FRAKEEEIE
Sbjct: 1   MTTQKQSWEAQ--QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIE 60

Query: 90  RKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLG 149
           RKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRKEVSFIRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLG 120

Query: 150 LTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           LTCQKKEREYKEVL+LFNEKN+EKSQL++KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 121 LTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of Lcy06g014120 vs. NCBI nr
Match: XP_004139478.1 (uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical protein Csa_022823 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 2.5e-72
Identity = 159/177 (89.83%), Postives = 169/177 (95.48%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQMQRVKNSGMISSHVNG--IGSPMREDQEEELSRSAFAVFRAKEEEI 89
           MTT +QSWEAQ  QMQRVKNSGMISS+VN   IGSP++EDQEEE+SRSA A+FRAKEEEI
Sbjct: 1   MTTQKQSWEAQ--QMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEI 60

Query: 90  ERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPL 149
           ERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRKEVSFIRKKIDLVNKELKPL
Sbjct: 61  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 120

Query: 150 GLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDIL 205
           GLTCQKKEREYKEVL+LFNEKNKEKSQL++KLMELVNESEKLRMKKLEELSKNIDIL
Sbjct: 121 GLTCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of Lcy06g014120 vs. NCBI nr
Match: XP_022930056.1 (uncharacterized protein LOC111436527 [Cucurbita moschata] >KAG6583639.1 hypothetical protein SDJN03_19571, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019311.1 hypothetical protein SDJN02_18271 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.8 bits (673), Expect = 1.2e-66
Identity = 153/177 (86.44%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQM-QRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIE 89
           MTT +QSWEAQQSQM QRVK +         IGSP REDQEEELSRSA A+FRAKEEEIE
Sbjct: 1   MTTQKQSWEAQQSQMQQRVKKA---------IGSPAREDQEEELSRSALALFRAKEEEIE 60

Query: 90  RKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLG 149
           RKKMEMR+KVE RLGRAEEATKRLAEIREELEGM DPMRKEVS IRKKIDLVNKELKPLG
Sbjct: 61  RKKMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLG 120

Query: 150 LTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH 206
           +TCQKKEREYKEVLEL NEKNKEKSQLIAKLMELVNESEKLRMKKLEELS NIDILH
Sbjct: 121 ITCQKKEREYKEVLELLNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSNNIDILH 168

[Close]

BLAST of Lcy06g014120 vs. TAIR 10
Match: AT2G27740.1 (Family of unknown function (DUF662) )

HSP 1 Score: 200.3 bits (508), Expect = 1.5e-51
Identity = 113/175 (64.57%), Postives = 147/175 (84.00%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQ-MQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIE 89
           M T RQ  E  QS  +QR+K+SG IS +    GSPM +++EEELS+SAFA+F+AKE+EIE
Sbjct: 1   MATTRQILEQPQSPFIQRIKSSGNISMN----GSPMIDEKEEELSQSAFALFKAKEDEIE 60

Query: 90  RKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLG 149
           R+KME++D+V+ +LG AEEAT+RLAEIREELE + DPMRKE+S IRK++D +N+ELKPLG
Sbjct: 61  RRKMEVKDRVQKKLGLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPLG 120

Query: 150 LTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDI 204
            +CQ+KERE+KE LE +NEKNKEK+  ++KL+ELV ESEKLRM KLEELSK+I+I
Sbjct: 121 QSCQRKEREFKEALEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIEI 171

[Close]

BLAST of Lcy06g014120 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-49
Identity = 106/144 (73.61%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 62  SPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEG 121
           S     ++EE+SR+A + FRAKEEEIE+KKME+R++V+A+LGR EE TKRLA IREELEG
Sbjct: 35  SSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEG 94

Query: 122 MADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLME 181
           +ADPMRKEV+ +RKKID VNKELKPLG T QKKEREYKE LE FNEKN+EK QLI +LME
Sbjct: 95  LADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLME 154

Query: 182 LVNESEKLRMKKLEELSKNIDILH 206
           LV ESEK+RMKKLEELSKNID +H
Sbjct: 155 LVGESEKMRMKKLEELSKNIDSIH 178

[Close]

BLAST of Lcy06g014120 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 181.0 bits (458), Expect = 9.5e-46
Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIER 89
           MTT  ++      QM  +  S  +S             ++EE++RSA + FRAKE+EIE+
Sbjct: 1   MTTTNEATTQPPQQMMSLSFSSQMSK------------EDEEMARSALSAFRAKEDEIEK 60

Query: 90  KKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLGL 149
           +KME+R++V+A+LGR EE T+RLA IREELE MADPMRKEV+++RKKID VNKELKPLG 
Sbjct: 61  RKMEVRERVKAQLGRVEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPLGS 120

Query: 150 TCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNID 203
           T QKKEREYKE L+ FNEKN+EK QLI KLMELV ESEKLR+KKL+ELS++ID
Sbjct: 121 TVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRLKKLDELSRSID 161

[Close]

BLAST of Lcy06g014120 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 180.3 bits (456), Expect = 1.6e-45
Identity = 105/172 (61.05%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 31  TTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERK 90
           + P Q     Q Q Q+  N  ++ +      S M   ++EE++RSA + FRAKE+EIE++
Sbjct: 20  SVPPQPQSQPQPQPQQQSNEMVLHTGSLSFSSHMSR-EDEEMTRSALSAFRAKEDEIEKR 79

Query: 91  KMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLGLT 150
           +ME+R++++A+LGR E+ TKRL+ IREELE MADPMRKEVS +RKKID VNKELKPLG T
Sbjct: 80  RMEVRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGST 139

Query: 151 CQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNID 203
            QKKEREYKE L+ FNEKN+EK QLI KLMELV ESEKLRM KLEELSK+I+
Sbjct: 140 VQKKEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIE 190

[Close]

BLAST of Lcy06g014120 vs. TAIR 10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 175.6 bits (444), Expect = 4.0e-44
Identity = 105/176 (59.66%), Postives = 132/176 (75.00%), Query Frame = 0


Query: 30  MTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIER 89
           MTT  ++      QM  +  S  +S             ++EE++RSA + FRAKE+EIE+
Sbjct: 1   MTTTNEATTQPPQQMMSLSFSSQMSK------------EDEEMARSALSAFRAKEDEIEK 60

Query: 90  KKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLGL 149
           +KME+R++V+A+LGR EE T+RLA IREELE MADPMRKEV+++RKKID VNKELKPLG 
Sbjct: 61  RKMEVRERVKAQLGRVEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPLGS 120

Query: 150 TCQKKEREYKEVLELFNEKNKEKSQLIAKLME---LVNESEKLRMKKLEELSKNID 203
           T QKKEREYKE L+ FNEKN+EK QLI KLME   LV ESEKLR+KKL+ELS++ID
Sbjct: 121 TVQKKEREYKEALDTFNEKNREKVQLITKLMEMGQLVGESEKLRLKKLDELSRSID 164

The following BLAST results are available for this feature:

BLAST of Lcy06g014120 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g014120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNF1	8.9e-76	92.13	RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1	[more]
A0A5D3CH78	1.1e-73	89.83	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CFV6	1.1e-73	89.83	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1	[more]
A0A0A0LY59	1.2e-72	89.83	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1	[more]
A0A6J1EPU7	5.8e-67	86.44	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111436527 PE=3 SV=1	[more]

BLAST of Lcy06g014120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893849.1	6.3e-76	92.70	uncharacterized protein LOC120082661 [Benincasa hispida]	[more]
XP_022142637.1	1.8e-75	92.13	uncharacterized protein LOC111012700 [Momordica charantia]	[more]
XP_008461743.1	2.2e-73	89.83	PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >...	[more]
XP_004139478.1	2.5e-72	89.83	uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical ...	[more]
XP_022930056.1	1.2e-66	86.44	uncharacterized protein LOC111436527 [Cucurbita moschata] >KAG6583639.1 hypothet...	[more]

BLAST of Lcy06g014120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27740.1	1.5e-51	64.57	Family of unknown function (DUF662)	[more]
AT3G09980.1	1.8e-49	73.61	Family of unknown function (DUF662)	[more]
AT3G52920.2	9.5e-46	60.69	Family of unknown function (DUF662)	[more]
AT2G36410.2	1.6e-45	61.05	Family of unknown function (DUF662)	[more]
AT3G52920.1	4.0e-44	59.66	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..192
None	No IPR available	COILS	Coil	Coil	coord: 98..118
None	No IPR available	PANTHER	PTHR21470:SF16	SUBFAMILY NOT NAMED	coord: 39..204
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 56..202 e-value: 8.9E-71 score: 236.8
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 39..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g014120.1	Lcy06g014120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus