Lcy06g013890 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g013890
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Electron transfer flavoprotein subunit alpha
Location	Chr06: 23938637 .. 23942945 (-)
RNA-Seq Expression	Lcy06g013890
Synteny	Lcy06g013890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCTTAAAGCCATCCATCTATTTGTCAGGTACCTTATTCCTTTAGTCACATTTCTATCTATGACCTAAGTTATACAGTTTACTTCTTTTGTATGGAAGATTTGATTCCTGCACATTCGAAGTACGTAACCTCACAACACCAATGCTAATACCAGAGATTGTGTAATGGTTGTTGTTGGTTTGTTCTATTTTGATTTATTGTATGAGTCATAAGTTTTTCGTATGACATTTTTTTAGGGAAAAGAAAGAGTTAATTAGAGTGATTTTTTGTTCTTAGGATTATTTCTCTTTGTGGTTACCTTGTTTCTGATATCACAAATTGAATGTTATTTCGGTGCTTGTTGCTGTTTTTGTAAATGTACTTTGTTATTTCGGTGAATGTTATTTCGGTCCAGCAAAAGAATGGGTATTCTCATATAATTTCCGCTTCAGGTTCTTTTGGGAAAAACACTCTTCCATGCGCTGCCACTCTTTTAGATGTTTCACCAGTGTTACTGACGTTTTTGCTATATCTTGATCTTGTCAATTTGTGAGATTCCTTTAGTTTTTTGCCCTTAATCCTTGACTATAGCGACATGTATGCAACTGATTGAAGTGTTTTGTGTACTCTACATTAATCCTAACAAATGTATTTCTCACGAGTTTAACCTTTTCCGTCCACGTAGAAACATGTACTTTTCAGATGTTCATCTTGCTGCTGATGTTGTTTATGTTATGGTGCAGAAATTCATTTACTTGGAGAAATACTTGTTCTTTTCCCCTTATTTTTCACCATTTCATGTTTTAATGTTAAATTTTCTAAACCACAATTTTGCATTTTACATGACAATTTCAGTTTGTGATTATGATGTACCACTTAAATTCTTGGTCTCTTTTTTTTTGTGTGTTTTTTAGCAAAGCTCATTCTTAATTGATATACAATATATTTTTTTTCTAAAAGTAAAAGAAGGAAGACTGATTATACAATTTGGAACTCGTAATAGGCCCATATATGCTGGGAATGCACTTTGTACAGTTAGATACACAGGGGCTGACCCTTGTATGTTGACCATACGATCTACATCATTCCCAGTGACCTTGAAATCAACTGAGTCAACATCAAATAAATCCCCCTTAGGTTGATCTCTCAATGTTTGGTGGAGGTAAGCCTACAACCTAATTTTCTATCTCAAAGAATTCTCTTCACTCACAAAAAAGAAAGTAGTGAAAGCTTATGCTTATTTGACTACCCTTAGGCAACATAGTAATGATGAATGTCCCTCATCCTGTAAGGGGAATACTCTCCATAGTACTTTTCTAGATTATTTTAATTTGTGTTGGATTAGTTCAGCAGCCTGCCAAAGAATTAGGACATGTAATTAGGTTTAATAAGCGATGTCATTCTTTTAGATTCTATTGGAAAATCTAGATATGTAAATAACATATCTGAGGAAGCAGAACATCCAGATCTTGCAAATGCACATGTTGTTGTCATTGGAGGACGTGGTTTGAAAAGTGTTGAAAACTTCAAAATGATAGATAAGCTGGCTGAGAAATTTGGTGTTGCAGGTAGATTCAGCTTGAATATAATTTAAAAATTTTTTTCTTTTTGCATCATCAATTATTATATTCTTTTTCTCTGTTTATGAAATATTGATAGCCAAATGTCCTAATATCTCATGGCGTTTGGGCCATGTGCTGTCTACCAATGGCTAAGGATAGAAAACATTTGATCTTAAAACTCTTAGCATTTAACCCTATTTTCAATTTGTTGTGTATCCAAGAAATAAAATTTTGTCAATAACGAAATAATAATGTGTTGTTTACTACATTCTCTAATCTTATAAGCTAATCTGTTTCTTATTCTCTTATTTATTTAGTTGGTGCCACATGTGCTACTGTTGATGCTGGATTTGTTCCCAATGACCTTCAGGTAACGTCTCTAAATGATTCCTTTCTAGTTGGGTTTATATTCTACCTCGTATTTCCAGATTATCCTAGGTTTTTGTTGATTATGTGTTTCCATCTCCTTGAATTTTCAATTTACTAGTTCCAAAGTAATTTGCTGCCAAGAATATTGCTTTGTATTATCTTTGGTAAGTTTAAGCCCCAAACAGCAAGCATAGGTTCTATCTTTGGTAAGTTTTGAGTGTTAATTTTTCCAAATCTAATTGTCTCTTAGTGAAATATTTGACTTGAACTTTCTATTTGGTTTTAAGGAATTTATCCCCTTTTGTGTAGCTTCCTTGAAGCCTTGGAGTTAAGAAATTTTGTAAAGGGTTTGTCACTTATTATTTGGTCAAGTAAGTAGCTATTTGGATTAAGCTTTCATATTTTAGACCCATTTAAATGGAAGATTTTTATATGCTAGTATGATTGGATTCAAACACTAAGTATGGCATTTGAACTTAAGTAAGCATGTTTTGTTAGTTCGAAGCATGATGAGATTATGCAATCAAATAGCTAGATGAGACTCATATTTGGATATCTTGTGAGTAGCAGGGTATATGTGATAATTAAAGTTAGGGATGAATTATTGTTTGTTGATTGGAGTTTGGGCTGGATATCTTTTTTTTTTTTTTTTTTTTTATAATTATGGTTGAGTTGTGGATACGAGACCTGACTCGCTTCGCACAATCAATGATGAAGGCCACTCCTTTCTTCTTCCTTTCGTGGTGTTCTAAATGTGTTATTTGCCACCATAGTTTATTTCTATATGTTCAAATTGGATTCAGTTTTTGTGGGTCTGTTTCTATATTATTTATTTTTCGAGCTAGGTTGAGAAAATATGATTTGAATGAGGCAACAAAGGTTTCCGTTGAGTCGTTGATCTGGGGAAGCATGAAATTTACTTTGGTGGGGTGGCTTTGAGTTAACTATTTACTTAACTGATAATTGATTGTTGGTGGTACGAATCACCTATTCATAGGGATTTATTTTGCTCATTCATTAGCTGGTTCTTCTGTATCTTTACAGGTAAGCAAATGGACGCTTTGTTAGTTGTTTTCTAGCATAGGCATTTTGATTGGATGGAAACTGGTTTCTTTGTGGGAGTTGAACTTTTAGATCACTGAAGTGATGTGGACAAATATTTTCAAAATTGTATGTTCCTTAGCCGATCAAATTTAGATCTATTCCTAATGTAAATGCATGGTAGTCGTACATTTTAATTCTGTTATTTTTCTGCGTTGAAGTGCTAGTTGTGTTTGTTCTCATAATGGAAACTTGGTTACGTCTTGGTGCTTTGCACTTTTCCCTCTATTCTCGAGCTTTGCAAGTGACACAAATTGTTGAAATTTACAATCTCCAAAAACTCAACTGCAATTGTTGATGGAGTGAGATTGCCTTATCTGCTTGACGGTTAACATGTTACACTTTTTTTTCTTTTTCCTAATTTAGCTGATTAGGATCCTTTAGACGGTTTATATTAGAACGTTTTGGAATCTTTGTTGTGATCCATTAGAAACTGAACTCCATATCAATGTTTTTAAGGTGATGGTGGGCAATAGGTGAGGCAGGATGCGCACCAATGCTCAATAGTTTGTCATCCTAAGTGCATTAAATAGGTGCTTGTGTCTCGTGTATGTTGTCTTTTGATCTTATTATTACTTTCCTTGTTTGCGACTTAACTCACATCGTAGTGACTTGGCTGAAATATCTTTGCTCCCTAAAATGTGGCATCAAAGTAATTTGGCAAATACAAACTTATCATTGCTCACTTTGACATCAACCCAAAAGTAATTTTGCTGAAATATCCTTGCAATCAATCTACTTTGATGCTAATTGTCTTCACAATTGCTTTGCTTTGCTTTGACTGTGCATAAACACACAATTTATTTATCAGGTGCAACTTTCCATTTCTAAAAAATGTGCTTTACTACTCTTAGGCTAATCCTCGAATATATTTATTGCATTTGTATAGTCCTATTAATTACTCTACTATGATTTTGTCATAGGGTGGTTCGAATTGTATTATTTAAAAATTATTGTGAACGTCTATCCTGATTTTCCAACAATGGTAGTGGCATCAATGGACAACAATCCATCTCCTCTTTTCTTTTCCTCTCTACCGCCATTTGCAGAAGAAAACCCTCTCCCCCAATTTCCCTCCCTCTCTCTAATCTATCTCTTTCTCCTTCTCGATCACGAACAGGTAGCGCCACCATTGCCCTCTCTCTCACCTCTGATCGAACTCCGACGTCCACAGAGAGCGTCGATAGCATTCATCCTTCCTATCTCTGGCGTCCTGTGTGTTCGTCCGGTGGGCTGTGAGTTCGAGCAAGGTGCGTTTCTCGGTGTGGGTTTTGTTTCTTTGTGTTTCCAGTGA

mRNA sequence

ATGTTGCTTAAAGCCATCCATCTATTTGTCAGGCCCATATATGCTGGGAATGCACTTTGTACAGTTAGATACACAGGGGCTGACCCTTGTATGTTGACCATACGATCTACATCATTCCCAGTGACCTTGAAATCAACTGAGTCAACATCAAATAAATCCCCCTTAGGTTTAATAAGCGATGTCATTCTTTTAGATTCTATTGGAAAATCTAGATATGTAAATAACATATCTGAGGAAGCAGAACATCCAGATCTTGCAAATGCACATGTTGTTGTCATTGGAGGACGTGGTTTGAAAAGTGTTGAAAACTTCAAAATGATAGATAAGCTGGCTGAGAAATTTGGTGTTGCAGTTGGTGCCACATGTGCTACTGTTGATGCTGGATTTGTTCCCAATGACCTTCAGGTAGCGCCACCATTGCCCTCTCTCTCACCTCTGATCGAACTCCGACGTCCACAGAGAGCGTCGATAGCATTCATCCTTCCTATCTCTGGCGTCCTGTGTGTTCGTCCGGTGGGCTGTGAGTTCGAGCAAGGTGCGTTTCTCGGTGTGGGTTTTGTTTCTTTGTGTTTCCAGTGA

Coding sequence (CDS)

ATGTTGCTTAAAGCCATCCATCTATTTGTCAGGCCCATATATGCTGGGAATGCACTTTGTACAGTTAGATACACAGGGGCTGACCCTTGTATGTTGACCATACGATCTACATCATTCCCAGTGACCTTGAAATCAACTGAGTCAACATCAAATAAATCCCCCTTAGGTTTAATAAGCGATGTCATTCTTTTAGATTCTATTGGAAAATCTAGATATGTAAATAACATATCTGAGGAAGCAGAACATCCAGATCTTGCAAATGCACATGTTGTTGTCATTGGAGGACGTGGTTTGAAAAGTGTTGAAAACTTCAAAATGATAGATAAGCTGGCTGAGAAATTTGGTGTTGCAGTTGGTGCCACATGTGCTACTGTTGATGCTGGATTTGTTCCCAATGACCTTCAGGTAGCGCCACCATTGCCCTCTCTCTCACCTCTGATCGAACTCCGACGTCCACAGAGAGCGTCGATAGCATTCATCCTTCCTATCTCTGGCGTCCTGTGTGTTCGTCCGGTGGGCTGTGAGTTCGAGCAAGGTGCGTTTCTCGGTGTGGGTTTTGTTTCTTTGTGTTTCCAGTGA

Protein sequence

MLLKAIHLFVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLISDVILLDSIGKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDAGFVPNDLQVAPPLPSLSPLIELRRPQRASIAFILPISGVLCVRPVGCEFEQGAFLGVGFVSLCFQ

Homology

[Close]

BLAST of Lcy06g013890 vs. ExPASy Swiss-Prot
Match: Q9C6I6 (Electron transfer flavoprotein subunit alpha, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ETFA PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.3e-40
Identity = 86/129 (66.67%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           F+RPIYAGNALCTVRYTGA PCMLTIRSTSFPVT  +  S S K+ +  I       DS+
Sbjct: 164 FIRPIYAGNALCTVRYTGAGPCMLTIRSTSFPVTPITANSESKKATVSQIDLSNFEDDSV 223

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
            KSRYV   +++ E PDL +A VV+ GGR LKSVENFKMI+KLAEK G AVGAT A VDA
Sbjct: 224 SKSRYVGRSTQDTERPDLGSARVVITGGRALKSVENFKMIEKLAEKLGGAVGATRAAVDA 283

Query: 129 GFVPNDLQV 137
           G+VPNDLQV
Sbjct: 284 GYVPNDLQV 292

[Close]

BLAST of Lcy06g013890 vs. ExPASy Swiss-Prot
Match: A2XNR6 (Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=ETFA PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-36
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 0


Query: 8   LFVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLISDVILLD-S 67
           +FVRPIYAGNALCTVRYTG DPCM++IRSTSF  T     S +  +P+  +    L + S
Sbjct: 160 VFVRPIYAGNALCTVRYTGEDPCMMSIRSTSFSPT--EAMSEAKVAPITQVDLSFLSEGS 219

Query: 68  IGKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVD 127
            GKS +VN  S++ E PDLANA VVV GGRGLKS ENFK++++LAEK G AVGAT A VD
Sbjct: 220 SGKSAWVNLKSQDTERPDLANAPVVVTGGRGLKSAENFKVLEQLAEKLGAAVGATRAAVD 279

Query: 128 AGFVPNDLQV 137
           AGFVPN+LQV
Sbjct: 280 AGFVPNELQV 287

[Close]

BLAST of Lcy06g013890 vs. ExPASy Swiss-Prot
Match: Q75LJ3 (Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=ETFA PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-36
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 0


Query: 8   LFVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLISDVILLD-S 67
           +FVRPIYAGNALCTVRYTG DPCM++IRSTSF  T     S +  +P+  +    L + S
Sbjct: 160 VFVRPIYAGNALCTVRYTGEDPCMMSIRSTSFSPT--EAMSEAKVAPITQVDLSFLSEGS 219

Query: 68  IGKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVD 127
            GKS +VN  S++ E PDLANA VVV GGRGLKS ENFK++++LAEK G AVGAT A VD
Sbjct: 220 SGKSAWVNLKSQDTERPDLANAPVVVTGGRGLKSAENFKVLEQLAEKLGAAVGATRAAVD 279

Query: 128 AGFVPNDLQV 137
           AGFVPN+LQV
Sbjct: 280 AGFVPNELQV 287

[Close]

BLAST of Lcy06g013890 vs. ExPASy Swiss-Prot
Match: Q99LC5 (Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Etfa PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.8e-20
Identity = 61/135 (45.19%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 3   LKAIHLFVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTES-TSNKSPLGLISDV 62
           +K+   FVR IYAGNALCTV+       + ++R TSF     S  S +S K+P       
Sbjct: 138 IKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATSGGSASSEKAPSS----- 197

Query: 63  ILLDSIGKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGAT 122
               S+G S +++    +++ P+L  A VVV GGRGLKS ENFK++  LA++   AVGA+
Sbjct: 198 ---SSVGISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGAS 257

Query: 123 CATVDAGFVPNDLQV 137
            A VDAGFVPND+QV
Sbjct: 258 RAAVDAGFVPNDMQV 263

[Close]

BLAST of Lcy06g013890 vs. ExPASy Swiss-Prot
Match: P13803 (Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4)

HSP 1 Score: 98.6 bits (244), Expect = 8.2e-20
Identity = 61/135 (45.19%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 3   LKAIHLFVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTES-TSNKSPLGLISDV 62
           +K+   FVR IYAGNALCTV+       + ++R TSF     S  S +S K+P       
Sbjct: 138 IKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAAASGGSASSEKAPSS----- 197

Query: 63  ILLDSIGKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGAT 122
               S G S +++    +++ P+L  A VVV GGRGLKS ENFK++  LA++   AVGA+
Sbjct: 198 ---SSAGISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGAS 257

Query: 123 CATVDAGFVPNDLQV 137
            A VDAGFVPND+QV
Sbjct: 258 RAAVDAGFVPNDMQV 263

[Close]

BLAST of Lcy06g013890 vs. ExPASy TrEMBL
Match: A0A6J1IG01 (Electron transfer flavoprotein subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111476899 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 5.3e-46
Identity = 102/129 (79.07%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVT KS ESTSNKSP+  +       DSI
Sbjct: 163 FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTSKSAESTSNKSPITQVDLSSFGGDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S+EAE PDLANA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSQEAERPDLANARVVVTGGRGLKSAENFKMIEKLAAKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. ExPASy TrEMBL
Match: A0A6J1FAU5 (Electron transfer flavoprotein subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111443645 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.5e-45
Identity = 101/129 (78.29%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALC VRYTGADPCMLTIRSTSFPVT KS ESTSNKSP+  +       DSI
Sbjct: 163 FVRPIYAGNALCKVRYTGADPCMLTIRSTSFPVTSKSVESTSNKSPITQVDLSTFGGDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S+EAE PDLANA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSQEAERPDLANARVVVTGGRGLKSAENFKMIEKLAAKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. ExPASy TrEMBL
Match: A0A6J1CEQ3 (Electron transfer flavoprotein subunit alpha OS=Momordica charantia OX=3673 GN=LOC111010554 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.0e-45
Identity = 98/129 (75.97%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLT+RSTSFPVT +S ESTSNKSP+  +       DS+
Sbjct: 164 FVRPIYAGNALCTVRYTGADPCMLTVRSTSFPVTSRSAESTSNKSPISQVDLSTFGGDSV 223

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV + S+EAE PDL NA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 224 GKSRYVKHTSQEAERPDLGNARVVVTGGRGLKSAENFKMIEKLAGKLGAAVGATRAAVDA 283

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 284 GFVPNDLQV 292

[Close]

BLAST of Lcy06g013890 vs. ExPASy TrEMBL
Match: A0A1S4E054 (Electron transfer flavoprotein subunit alpha OS=Cucumis melo OX=3656 GN=LOC103494930 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 98/129 (75.97%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPV  KS E  SNKS +  +   ++ +DSI
Sbjct: 163 FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVPAKSIELASNKSAVSEVDLSMLDVDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S EAE PDLANA VVV GGRGLK+ ENFKMI+KLAEK G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSPEAERPDLANARVVVTGGRGLKTAENFKMIEKLAEKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. ExPASy TrEMBL
Match: A0A5D3BD13 (Electron transfer flavoprotein subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00190 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 98/129 (75.97%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPV  KS E  SNKS +  +   ++ +DSI
Sbjct: 163 FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVPAKSIELASNKSAVSEVDLSMLDVDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S EAE PDLANA VVV GGRGLK+ ENFKMI+KLAEK G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSPEAERPDLANARVVVTGGRGLKTAENFKMIEKLAEKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. NCBI nr
Match: KAG6592027.1 (Electron transfer flavoprotein subunit alpha, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024901.1 Electron transfer flavoprotein subunit alpha, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.9 bits (494), Expect = 6.4e-46
Identity = 102/129 (79.07%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVT KS ESTSNKSP+  +       DSI
Sbjct: 163 FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTSKSVESTSNKSPITQVDLSTFGGDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S+EAE PDLANA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSQEAERPDLANARVVVTGGRGLKSAENFKMIEKLAAKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. NCBI nr
Match: XP_023534854.1 (electron transfer flavoprotein subunit alpha, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.9 bits (494), Expect = 6.4e-46
Identity = 102/129 (79.07%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVT KS ESTSNKSP+  +       DSI
Sbjct: 163 FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTSKSAESTSNKSPITQVDLSTFGGDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S+EAE PDLANA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSQEAERPDLANARVVVTGGRGLKSAENFKMIEKLAAKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. NCBI nr
Match: XP_022976532.1 (electron transfer flavoprotein subunit alpha, mitochondrial [Cucurbita maxima])

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-45
Identity = 102/129 (79.07%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVT KS ESTSNKSP+  +       DSI
Sbjct: 163 FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTSKSAESTSNKSPITQVDLSSFGGDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S+EAE PDLANA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSQEAERPDLANARVVVTGGRGLKSAENFKMIEKLAAKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. NCBI nr
Match: XP_022937319.1 (electron transfer flavoprotein subunit alpha, mitochondrial [Cucurbita moschata])

HSP 1 Score: 192.6 bits (488), Expect = 3.2e-45
Identity = 101/129 (78.29%), Postives = 105/129 (81.40%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALC VRYTGADPCMLTIRSTSFPVT KS ESTSNKSP+  +       DSI
Sbjct: 163 FVRPIYAGNALCKVRYTGADPCMLTIRSTSFPVTSKSVESTSNKSPITQVDLSTFGGDSI 222

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV   S+EAE PDLANA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 223 GKSRYVKQTSQEAERPDLANARVVVTGGRGLKSAENFKMIEKLAAKLGAAVGATRAAVDA 282

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 283 GFVPNDLQV 291

[Close]

BLAST of Lcy06g013890 vs. NCBI nr
Match: XP_022139707.1 (electron transfer flavoprotein subunit alpha, mitochondrial [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 4.1e-45
Identity = 98/129 (75.97%), Postives = 106/129 (82.17%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           FVRPIYAGNALCTVRYTGADPCMLT+RSTSFPVT +S ESTSNKSP+  +       DS+
Sbjct: 164 FVRPIYAGNALCTVRYTGADPCMLTVRSTSFPVTSRSAESTSNKSPISQVDLSTFGGDSV 223

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
           GKSRYV + S+EAE PDL NA VVV GGRGLKS ENFKMI+KLA K G AVGAT A VDA
Sbjct: 224 GKSRYVKHTSQEAERPDLGNARVVVTGGRGLKSAENFKMIEKLAGKLGAAVGATRAAVDA 283

Query: 129 GFVPNDLQV 137
           GFVPNDLQV
Sbjct: 284 GFVPNDLQV 292

[Close]

BLAST of Lcy06g013890 vs. TAIR 10
Match: AT1G50940.1 (electron transfer flavoprotein alpha )

HSP 1 Score: 164.9 bits (416), Expect = 6.6e-41
Identity = 86/129 (66.67%), Postives = 98/129 (75.97%), Query Frame = 0


Query: 9   FVRPIYAGNALCTVRYTGADPCMLTIRSTSFPVTLKSTESTSNKSPLGLIS-DVILLDSI 68
           F+RPIYAGNALCTVRYTGA PCMLTIRSTSFPVT  +  S S K+ +  I       DS+
Sbjct: 164 FIRPIYAGNALCTVRYTGAGPCMLTIRSTSFPVTPITANSESKKATVSQIDLSNFEDDSV 223

Query: 69  GKSRYVNNISEEAEHPDLANAHVVVIGGRGLKSVENFKMIDKLAEKFGVAVGATCATVDA 128
            KSRYV   +++ E PDL +A VV+ GGR LKSVENFKMI+KLAEK G AVGAT A VDA
Sbjct: 224 SKSRYVGRSTQDTERPDLGSARVVITGGRALKSVENFKMIEKLAEKLGGAVGATRAAVDA 283

Query: 129 GFVPNDLQV 137
           G+VPNDLQV
Sbjct: 284 GYVPNDLQV 292

The following BLAST results are available for this feature:

BLAST of Lcy06g013890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C6I6	9.3e-40	66.67	Electron transfer flavoprotein subunit alpha, mitochondrial OS=Arabidopsis thali...	[more]
A2XNR6	3.6e-36	63.08	Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subs...	[more]
Q75LJ3	3.6e-36	63.08	Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subs...	[more]
Q99LC5	2.8e-20	45.19	Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus OX=1...	[more]
P13803	8.2e-20	45.19	Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus...	[more]

BLAST of Lcy06g013890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG01	5.3e-46	79.07	Electron transfer flavoprotein subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FAU5	1.5e-45	78.29	Electron transfer flavoprotein subunit alpha OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1CEQ3	2.0e-45	75.97	Electron transfer flavoprotein subunit alpha OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S4E054	2.9e-44	75.97	Electron transfer flavoprotein subunit alpha OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A5D3BD13	2.9e-44	75.97	Electron transfer flavoprotein subunit alpha OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Lcy06g013890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592027.1	6.4e-46	79.07	Electron transfer flavoprotein subunit alpha, mitochondrial, partial [Cucurbita ...	[more]
XP_023534854.1	6.4e-46	79.07	electron transfer flavoprotein subunit alpha, mitochondrial [Cucurbita pepo subs...	[more]
XP_022976532.1	1.1e-45	79.07	electron transfer flavoprotein subunit alpha, mitochondrial [Cucurbita maxima]	[more]
XP_022937319.1	3.2e-45	78.29	electron transfer flavoprotein subunit alpha, mitochondrial [Cucurbita moschata]	[more]
XP_022139707.1	4.1e-45	75.97	electron transfer flavoprotein subunit alpha, mitochondrial [Momordica charantia...	[more]

BLAST of Lcy06g013890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50940.1	6.6e-41	66.67	electron transfer flavoprotein alpha	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014731	Electron transfer flavoprotein, alpha subunit, C-terminal	PFAM	PF00766	ETF_alpha	coord: 84..136 e-value: 1.5E-12 score: 47.4
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 4..55 e-value: 1.9E-9 score: 39.3
None	No IPR available	GENE3D	3.40.50.1220		coord: 79..139 e-value: 2.0E-16 score: 61.8
None	No IPR available	PANTHER	PTHR43153:SF1	ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT ALPHA, MITOCHONDRIAL	coord: 6..136
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 8..46
IPR001308	Electron transfer flavoprotein alpha subunit/FixB	PANTHER	PTHR43153	ELECTRON TRANSFER FLAVOPROTEIN ALPHA	coord: 6..136
IPR029035	DHS-like NAD/FAD-binding domain superfamily	SUPERFAMILY	52467	DHS-like NAD/FAD-binding domain	coord: 81..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g013890.1	Lcy06g013890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding