Lcy06g013530 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g013530
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCopper ion binding protein
LocationChr06: 20524589 .. 20529303 (+)
RNA-Seq ExpressionLcy06g013530
SyntenyLcy06g013530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTAGCAACTCCCACCATTTTCTTCCTAAAACTCTCTCTCTCTTCATCTCTCGGTAAGTAATCTTCTTCAAGCAAAGCTTGCGTAGTTGTTCTATGTTTTTCCAAATAATTGTTATGTTTCAATTGAATCACTCGTTTGCCCGTTGTCAGGAAAGGCGATCAATCGAAATGGCAGCAGCGAGAACGGCCGCAAGAATTTTTTCGCGAAGGTTCTCGAGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCGGAGAATGTCTACATCAAGGTGCCCATCCGAAGCCTCCGACCTGTGATTTTTGCGTTTTGCAGTTTGTTTTTTTGGTGCTTTTCTGATTTTGTTAGGGTCGCGTTGGTTGTTTCATAGATTATAAGCAATGAAATGAATAGAAAAGTATGTTGAATTTGCTTGTTGCAGACGTACAGCTTGCTTGTTTTGAGAGGTTTTAAGTTTCTCGATGAATCGAGCTCTACGCTATCAAAATGAGTCTGCTATTCTTTTCTATTTTTAGATTGTTCGTTTTTATTTTTGTTTGAAATGAGATCGTATCATTTGGTTTTAGAGACGGATTTAAAAAAATTTTGAGCAATTGGAGTCCCTTTGTGTTTTCTGAGGGAAACTCCTGTACATATTCATGGAAGTCGGCATTAAAATTGTACTCGAGAGTATGGAGGACAAGAGTTTTGTTTAAGAGAGGAGGAAACTTACGATCATGTAATATTTTATCAACTAATATTTGTCTTTTATTTTGAATAATTAGGTATTTAGATATTTTATTAGGTTGGAATTTATTTTCTTACTAGTGATTTCCTTAGTTTTAGGAATTTCTAATAGTTCGCTGGTTCATAAATTATTGTATTTATATGATGAAATAAGTGAAAAGGTATGGAGAATTTACTTGTGGGAAATGTAGATAGTTTTGCTTTTTGAGTTGTTTGGAGACTCAATGATGGAAGTCTAAACTCTTTTTTTTAAAAACAAGATATGAAACTTTTTATTGATGAAATGAAAAGAGACTAATGCTCAAAGGATACAAACTCCACAAGTGAGTGAAAATAAAAGAAAAAAAATAAAAAGCTTAAGGCCCAAACAAAACAAATTACAAAGGATAAATAAAAGTATTCCAAACTAGACAAAAGTCATATGATGAGAATACAATAAAAACCTTGAGAAAGAACATCAAAAAGAGGCCTTTAGATGAGCTTATTCAAACCGGACGAGTCATGAAAGAGACTTGCTTTGGAAGATCTATTGATTACGATTCAACCAAAATTCTGATAATGGAGCTAGATGTTTCTGATATAAAGTATTGAAAAAGCCAAGAATTTCTGCTTCAATTTCACCAAATGAAATAAGAGAATCTCCATTTTTCTATATCTTGTTTCTCTCCTCAATTAAATATAGCTCTAGTAATTCACCTTTGGCATAAGACCGCACTTGGAGTTCATTGGGGGAAAGGTCTCAATTCTGATTTGGCATCAAGCTGAGCTATTTCTTAGATGAGGTTATTGTAAGGACCCCAGTTATTCATACTTACAATAGGAGGGGTAAAAAAAGAGAAAGAACAGAGTGGGGACCGTTACGGGAGGTGGGATCGTGCGTGTACTGTCTGTTTGTGTGTTGGTAAGGGTTTAGTAGGGGTTTTGAGTCTTGGTGGAGCTCTGGCAAGTTTCTGAGAGTGTTTGGCTCTCAGGAGAGTTTCCCAGCTAAGTTTCTGACGAGTGTTTGGCTCTCAGGAGAGTTTCCCAGCTATCTCTAATAGCTGGATAGTTTTTGTGTTCTTGTTATGTTGTTTCTTTGTTCTCTTTAGCTGTTGATGAACTTTATTGCTTTGTCTGTTGGTGGTTACCAATCAATATAACAGTGTCGGATTTCTTGTTGCTGGATATTTGTGTCTTTTTCTGCTTGTCTTTAACAGGTTATTCAAGAAGATACCTAACAGTTATTCTCCTTTTTCTTCCTTCTATTTTCATAATGAGCAAACCATTCTTTGATGACTACTTTCAAATTTCTTGGCTTTGAAAGATATTATATATCCAGCCCAGCTATAGGAATGATTTTGTAGGAGAGAATTCTCGATAATTGATCTGCATTCTGTTTTGACACCCTTGAGTTTTCAAACATGACGTCCCATTCTTTAGAGATAAAAAATCAGTCGAACACCGAAACCCATCAACACCCTCCCTTGACCACGTCAATTTACCATTAGACAAAGGAATTTTCATCAACCCTTCTATTAAACTGCCTCATGCCTTTAGTCTGCCTTCCAACTAGTAATCTCTCGTAACCCCATCTAATCATATTAAAATATCCACCTACACTCACGGTTCATCACAATAAGAGTGGAGAGATCACAACTCACTCCAAAGAGGCTTCCTTTCTTTATAGTCATTTGGACCATATATGTTTGATATTCAACAAACTTTATTTTGCTGAAATGATACTTTCACCGAGAGAGAATAACCACCTTTTAACACCTCTAAAACTTTCATCTTACTCTCATCCCACAAGATTAAAAATCCAGTCAATCAGTCAAGAGATTTAATATGAACCTAATTGACATTTTTTGAACTCCAAAGTGATTTAATAAATCTCCTATCGAAGGAGGTCTTCTTGGTTTCTTATATAAGTACCAAATCGGGGAAAATATGCTGCAAAAATTTCTTCTACCTAACTCTCTTAGAACTATCTTCCAACCCTCTTGTATTCCAAGATATAATGATGGAAGTCTAAAGTCTTTCTATTGAGTCTACCGTCCTTTTAAATTTCTACCATCCAGTTTTATTTTTATTTAGAATAGGCCCATATTTTCTGTTCTGTAGTATGTTAGATGGTATTATTGAAGTAGAGGATCAGTTTCTGGATATCACCATAGAGATTCATGACTTTGTAATTAAAAGTACTTCTTCAGTTCTTCTTAGTGCAGTTCTAGAGTTCTTCATTTCGACTCTAGAGTATGATTGAGGGCTTTTTCCAGTTAGTTGTACTTTCATTGTTCTTAATTAATGTTTGGTTCATTTTTTTTTTTTTTTTTTTTTGAGTACATCAACATTTGGGGATGGGGGGATTCGAACCTCTGACCTCATGATCGAGGGTACATGCCAATTACCGCTGAGCTAAGCTCGCTTTGGCAATTAATGTTTGGTTCATTAATATGTATAATAGAATATTTTTTATGTGGAACATGTGTCTAAGCTGGAGCATCAAATTGCAAATTCTTGGAGATTTTTCAATGCCAAGAGTTTATGATATCTATAAGTGAACATGCCTCCTTTACCACCTGCTTGCTTATGTTGTCTTCATTACATTTTCTCCGTTCATAGTTCATTTTGTTGTGATTTTGCAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGTATGCTTGTAAGCTTAAAATTTTCGTTTGGGAACCTGGAGTTTGAAATTGTGGGGATCTTGGATAATCTAGCTGTTACAGAGTAAATTTTATAATTCTCTTAATCAGTGTAAAACTACATTATTATCTTACTGAAGTAATTTTAGATGTTTTATTCTATTGATGAGGTTTGTTAAGAAAATAGATTATCATTTCTATCGCTAAACAGAGCCTTCAGTTGTGGTTTTGAAGTATCTTATGCTTACACTAAGTTATTTTGGTTCCGAGATATTATATGGACCAATTTTTTAACAAATTAATTTTTGGAATGCTAAGATGAGATGGAAAGGTGTTGAAATGCTAATGCACCTTAATTACAGTGAATCGAAGTCCAAAACCACTTTGGCCATTCATACTTTGAGAGCTTTCTAAAAGTTGGGGATTTTGTAGTATATTTGAACTTTTAGCTTTTATGACCTGAACTAATGTGATTAGACCATTGTCTGAATTCTCTTAAATAGATGGTCACCTGATTCAAACATATAATCTCAAAGACATGAGTTTACAGTGTCTTTTGGAATTAAAATTACGTCTTTCTTTGAAGTTTGTGGGAATTACAATCTCAACACATTCATTTAGTTCCATTGGTATATTTACTTCACTTGCTATGATGAAGTCCTTGTTCTGTGGAAATATATTTCCTTTTTTGTGTGAGAGATGTTCTAATCTTCTGGGCTACAAATGCCGAATGTTTCTAGGGACCTAAACCAGAAGAGAAACCGGGAGGATCAGTAACCGATTCCATCCCAAATGGCTCAGACTCAGCATCAGGAGCATCAACAGAGAAAATATCTACTGACAAACACCGCAATTATGCTGTTGTAGCCGGAACTGTGACTATTCTTGGCGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGGCAGAAGAAGTCCAGGACTGAGATAGCAAACAACATATTGTTTTTCATATCATCAGCATCTTGAAGGAAGGAGGAGGTGAGTTGTTCTCCTTTCCTTGCTGAATAAACCAGAAATTGAGATGCATATGGCTCTTGGTTAATGAATACATTCCGTTCAGATTTACGTTTCTCTCTGAAAATGGTTTTCTTTTTTGCCTTATTTCCTTTCCTGGAGAGTTAACAGTGATAAGACAGCATGGCAGCTGCTTTGTGACAAAGACATTGCCTAATTGAGTTTCATTTTCAAATTCTCTACAACAATATTGGGAAATTAAATCCTCCATTTCTATCACTTTTGAGTTTTGATAACCATAACTCTTATAAATGCATTTTTTCCCTCTAAGGCGGTTTGGAATGAGTGTTC

mRNA sequence

CTGTAGCAACTCCCACCATTTTCTTCCTAAAACTCTCTCTCTCTTCATCTCTCGGAAAGGCGATCAATCGAAATGGCAGCAGCGAGAACGGCCGCAAGAATTTTTTCGCGAAGGTTCTCGAGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCGGAGAATGTCTACATCAAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAGAAACCGGGAGGATCAGTAACCGATTCCATCCCAAATGGCTCAGACTCAGCATCAGGAGCATCAACAGAGAAAATATCTACTGACAAACACCGCAATTATGCTGTTGTAGCCGGAACTGTGACTATTCTTGGCGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGGCAGAAGAAGTCCAGGACTGAGATAGCAAACAACATATTGTTTTTCATATCATCAGCATCTTGAAGGAAGGAGGAGGTGAGTTGTTCTCCTTTCCTTGCTGAATAAACCAGAAATTGAGATGCATATGGCTCTTGGTTAATGAATACATTCCGTTCAGATTTACGTTTCTCTCTGAAAATGGTTTTCTTTTTTGCCTTATTTCCTTTCCTGGAGAGTTAACAGTGATAAGACAGCATGGCAGCTGCTTTGTGACAAAGACATTGCCTAATTGAGTTTCATTTTCAAATTCTCTACAACAATATTGGGAAATTAAATCCTCCATTTCTATCACTTTTGAGTTTTGATAACCATAACTCTTATAAATGCATTTTTTCCCTCTAAGGCGGTTTGGAATGAGTGTTC

Coding sequence (CDS)

ATGGCAGCAGCGAGAACGGCCGCAAGAATTTTTTCGCGAAGGTTCTCGAGCAGCGGGAAGATTCTCAGCGAGGAAGAAAAGGCTGCGGAGAATGTCTACATCAAGAAAACTGAACAAGAGAAACTGGAGAAGCTTGCACGCAAGGGACCTAAACCAGAAGAGAAACCGGGAGGATCAGTAACCGATTCCATCCCAAATGGCTCAGACTCAGCATCAGGAGCATCAACAGAGAAAATATCTACTGACAAACACCGCAATTATGCTGTTGTAGCCGGAACTGTGACTATTCTTGGCGCTCTTGGCTGGTATCTCAAATCTAAAAAGAAGGCAGAAGAAGTCCAGGACTGA

Protein sequence

MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSVTDSIPNGSDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD
Homology
[Close]
BLAST of Lcy06g013530 vs. ExPASy Swiss-Prot
Match: Q9ZUX4 (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.5e-24
Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 0 

Query: 3   AARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSVTD 62
           A R A RI SRRF SSGK+LSEEE+AAENV+IKK EQEKL+KLAR+GP  E+  G +   
Sbjct: 2   ATRNALRIVSRRF-SSGKVLSEEERAAENVFIKKMEQEKLQKLARQGP-GEQAAGSASEA 61

Query: 63  SIPNGSDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKS-KKKAEEVQD 116
            +   + SAS  S  K+S DK+RNYAVVAG V I+G++GWYLK+  KK  EVQ+
Sbjct: 62  KVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE 113

[Close]
BLAST of Lcy06g013530 vs. ExPASy TrEMBL
Match: A0A6J1CMV3 (uncharacterized protein At2g27730, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012716 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.2e-46
Identity = 107/117 (91.45%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARI SRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGS 
Sbjct: 1   MAAARTAARIVSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSA 60

Query: 61  TDSIPNG--SDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
            DSIP+G  S SASGAS EKISTDKHRNYAVVAGTVTILGA+GWYLKSKKK EEVQD
Sbjct: 61  ADSIPSGSASASASGASAEKISTDKHRNYAVVAGTVTILGAVGWYLKSKKKPEEVQD 117

[Close]
BLAST of Lcy06g013530 vs. ExPASy TrEMBL
Match: A0A6J1HVU8 (uncharacterized protein At2g27730, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466619 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.3e-43
Identity = 102/116 (87.93%), Postives = 107/116 (92.24%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEKP  SV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  TDSIPNGS-DSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
            +SIP+GS  SASGASTEKIS+DK+RNYAVVAGTVTI GALGWYLKSKKK EEV D
Sbjct: 61  AESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]
BLAST of Lcy06g013530 vs. ExPASy TrEMBL
Match: A0A6J1G0C8 (uncharacterized protein At2g27730, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449519 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 101/116 (87.07%), Postives = 106/116 (91.38%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEKP  SV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  TDSIPNGS-DSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
            +SIP+GS  S SGASTEKIS+DK+RNYAVVAGTVTI GALGWYLKSKKK EEV D
Sbjct: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]
BLAST of Lcy06g013530 vs. ExPASy TrEMBL
Match: A0A5A7T219 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002960 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.6e-42
Identity = 104/125 (83.20%), Postives = 107/125 (85.60%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEK G SV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  TDSIP----------NGSDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKA 116
            DS+P          + S SASGAS+EKISTDK RNYAVVAGTVTILGALGWYLKSKKK 
Sbjct: 61  ADSVPSSSASGSSSASASASASGASSEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKP 120

[Close]
BLAST of Lcy06g013530 vs. ExPASy TrEMBL
Match: A0A1S3CEE3 (uncharacterized protein At2g27730, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499925 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.6e-42
Identity = 104/125 (83.20%), Postives = 107/125 (85.60%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEK G SV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKIGESV 60

Query: 61  TDSIP----------NGSDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKA 116
            DS+P          + S SASGAS+EKISTDK RNYAVVAGTVTILGALGWYLKSKKK 
Sbjct: 61  ADSVPSSSASGSSSASASASASGASSEKISTDKQRNYAVVAGTVTILGALGWYLKSKKKP 120

[Close]
BLAST of Lcy06g013530 vs. NCBI nr
Match: XP_038893784.1 (uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida] >XP_038893785.1 uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 7.0e-48
Identity = 109/115 (94.78%), Postives = 112/115 (97.39%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEK GGSV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKAGGSV 60

Query: 61  TDSIPNGSDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
           TDSIP+GS SASGASTEKIS+DKHRNYAVVAGTVTILGALGWYLKSKKK EEV+D
Sbjct: 61  TDSIPSGSASASGASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVRD 115

[Close]
BLAST of Lcy06g013530 vs. NCBI nr
Match: XP_022142661.1 (uncharacterized protein At2g27730, mitochondrial [Momordica charantia] >XP_022142662.1 uncharacterized protein At2g27730, mitochondrial [Momordica charantia])

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-45
Identity = 107/117 (91.45%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARI SRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGS 
Sbjct: 1   MAAARTAARIVSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSA 60

Query: 61  TDSIPNG--SDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
            DSIP+G  S SASGAS EKISTDKHRNYAVVAGTVTILGA+GWYLKSKKK EEVQD
Sbjct: 61  ADSIPSGSASASASGASAEKISTDKHRNYAVVAGTVTILGAVGWYLKSKKKPEEVQD 117

[Close]
BLAST of Lcy06g013530 vs. NCBI nr
Match: XP_038895664.1 (uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 5.2e-43
Identity = 104/116 (89.66%), Postives = 107/116 (92.24%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKK EQEKLEKLARKGPKPEEK  GSV
Sbjct: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKIEQEKLEKLARKGPKPEEKLEGSV 60

Query: 61  TDSIPNGSDSA-SGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
             S+P+GS SA SGASTEKIS+DKHRNYAVVAGTVTILGALGWYLKSKKK EEV D
Sbjct: 61  AGSVPSGSASAPSGASTEKISSDKHRNYAVVAGTVTILGALGWYLKSKKKPEEVHD 116

[Close]
BLAST of Lcy06g013530 vs. NCBI nr
Match: XP_022967119.1 (uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima])

HSP 1 Score: 183.7 bits (465), Expect = 8.8e-43
Identity = 102/116 (87.93%), Postives = 107/116 (92.24%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEKP  SV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  TDSIPNGS-DSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
            +SIP+GS  SASGASTEKIS+DK+RNYAVVAGTVTI GALGWYLKSKKK EEV D
Sbjct: 61  AESIPSGSASSASGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]
BLAST of Lcy06g013530 vs. NCBI nr
Match: XP_022945209.1 (uncharacterized protein At2g27730, mitochondrial [Cucurbita moschata])

HSP 1 Score: 182.2 bits (461), Expect = 2.6e-42
Identity = 101/116 (87.07%), Postives = 106/116 (91.38%), Query Frame = 0 

Query: 1   MAAARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSV 60
           MAAARTAARIFSRRFS SGKILSEEEKAAEN+YIKKTEQEKLEKLARKGPKPEEKP  SV
Sbjct: 1   MAAARTAARIFSRRFSGSGKILSEEEKAAENIYIKKTEQEKLEKLARKGPKPEEKPVESV 60

Query: 61  TDSIPNGS-DSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKSKKKAEEVQD 116
            +SIP+GS  S SGASTEKIS+DK+RNYAVVAGTVTI GALGWYLKSKKK EEV D
Sbjct: 61  AESIPSGSASSGSGASTEKISSDKYRNYAVVAGTVTIFGALGWYLKSKKKPEEVHD 116

[Close]
BLAST of Lcy06g013530 vs. TAIR 10
Match: AT2G27730.1 (copper ion binding )

HSP 1 Score: 110.9 bits (276), Expect = 6.8e-25
Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 0 

Query: 3   AARTAARIFSRRFSSSGKILSEEEKAAENVYIKKTEQEKLEKLARKGPKPEEKPGGSVTD 62
           A R A RI SRRF SSGK+LSEEE+AAENV+IKK EQEKL+KLAR+GP  E+  G +   
Sbjct: 2   ATRNALRIVSRRF-SSGKVLSEEERAAENVFIKKMEQEKLQKLARQGP-GEQAAGSASEA 61

Query: 63  SIPNGSDSASGASTEKISTDKHRNYAVVAGTVTILGALGWYLKS-KKKAEEVQD 116
            +   + SAS  S  K+S DK+RNYAVVAG V I+G++GWYLK+  KK  EVQ+
Sbjct: 62  KVAGATASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE 113

The following BLAST results are available for this feature:
BLAST of Lcy06g013530 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZUX49.5e-2459.65Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
BLAST of Lcy06g013530 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CMV39.2e-4691.45uncharacterized protein At2g27730, mitochondrial OS=Momordica charantia OX=3673 ... [more]
A0A6J1HVU84.3e-4387.93uncharacterized protein At2g27730, mitochondrial OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1G0C81.2e-4287.07uncharacterized protein At2g27730, mitochondrial OS=Cucurbita moschata OX=3662 G... [more]
A0A5A7T2193.6e-4283.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CEE33.6e-4283.20uncharacterized protein At2g27730, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
BLAST of Lcy06g013530 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893784.17.0e-4894.78uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida] >XP_03... [more]
XP_022142661.11.9e-4591.45uncharacterized protein At2g27730, mitochondrial [Momordica charantia] >XP_02214... [more]
XP_038895664.15.2e-4389.66uncharacterized protein At2g27730, mitochondrial-like [Benincasa hispida][more]
XP_022967119.18.8e-4387.93uncharacterized protein At2g27730, mitochondrial [Cucurbita maxima][more]
XP_022945209.12.6e-4287.07uncharacterized protein At2g27730, mitochondrial [Cucurbita moschata][more]
BLAST of Lcy06g013530 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27730.16.8e-2559.65copper ion binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..84
NoneNo IPR availablePANTHERPTHR33878:SF1OS08G0559000 PROTEINcoord: 2..115
NoneNo IPR availablePANTHERPTHR33878OS08G0559000 PROTEINcoord: 2..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g013530.1Lcy06g013530.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005747 mitochondrial respiratory chain complex I