Lcy06g013000 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g013000
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionsuccinate dehydrogenase assembly factor 2, mitochondrial
LocationChr06: 18197143 .. 18204057 (+)
RNA-Seq ExpressionLcy06g013000
SyntenyLcy06g013000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATGGCGACTTTTAGAAGGGCTTTGATCAAAGCTCATCAACTTCTGTACTCGGAAACCTCCACCATTTTGAGCAGCAAATCAATTCCCATCTTGTATAGCGCTTCTATTGGTTTGGAGAACCCACAAACCCGATTATCGAATCACTGTCAGAATCACCATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCGACGATTACAAATCCTCTACAAACAGATATCGACCTCTCAAATGATGAGAGCAGGAGGCGCTTGTTCACTAGGTTAGTCTTGCTAAATTTTGTTCATTAACTTTGACATCCCTTTTGCTCTCTCTCTTAATTATTGGCAATTGACAAGTCATTTTTGGTTGTTGGATTTAACAGGCTGCTGTACCAGAGCAAACAACGAGGGTTTCTGGAATTGGATTTGGTACTTGGGAAATGGGTAGAGGATCACATCAATTCCTTGGATGCAGATGGTATCAAAGCTCTGATTAATGTTCTTGACCTGGTAATTTAATCTGCTACCCATATTTGGATTGGTTTTCTATGCTTTGTGGTCCAGCCTTAGTTTGTTTTAATCCATAACTACACAGTTCTTTCATTACTTTAAGTGATTGAGTGCTCTTTTCCCCTGGGATTCAAAATACTTCAATGGTTTTTGCAACACATTTTGCTTGTATTAAGGAGAGAGTGATAGGTGCTTGTTTTCTGGGAATGGCTAAGGCAATACTATATCCACTGATTGAATTTTACGTGAATTTCCTTACCCATCAATTCATGGGCGTGATCTTCTCACATGAGTGTGGGTTTTCTAGTTTAGTTATTATACTTTATTGGGAAATTGGGTAATTATTAATCCATAATTACCATCAACTTAATTCTATTGAGGACTTTTCATGTATAATAAATTCAATCCTCTACTAGGCTTCTACATCTCATTTTTGTGTAAAACCTAAATCAAAGGTCGTCTTGTTGGAAGCTGGCAAGTACCGTTCCTTTTACCTATTTGGGTCTTCCTTTAGGAGTGTTGTCCTTCTAGAACCTAGTGGTGTACAGGGTTCAAGGACACATCTCTTCGTGGAAAATAGGCTTTTTTTCTCCAAGGATGCAAGGTAAACTCTTATCCAGTTTGTTTTATGATTTAATGTTGTTATTTAGGATTCCATTTTCTCTGTTGGTTAGGATGGAGCAGGTCATGAGGGACTTTGAAGGTGTGAATTCCATCTTCCTTTTTTCTACAGTTCCCCACTGTTACAACTTTGGTTTTGGGGGACTATGTTTGATAGGGAGTCTTAAGATTTCTTTGTGTTGTTTCCTAGGGATGTTCATTTGTGGCCTCCTAATTCATTTGGAGAGTTTTTTTGTAACTCATTCTTTTCGATTTTGTGCGGATCTTACCTTGCTCTCTTTTTGTTCTCCTGCTTGAATCACAAAAAGGCAAGAAGTTTTGCCTTGTAGGTTTCTCGGTGGAGGGTTAACACCACAGTCTTCTTGCAAATATTATCTTCTTTTCTTTTGGGCCCCACTGTCCATGATAGTTCTTTGGAGGAGTTGAAGCATATGGTCTGTTGTTGTCGGTTTGTCGTTTGATTTGGGATTATCTTCTTTCTTTTTTATTATTATTATTTTTCTAATGAGCTTATAAAGCTCCAATCATTTTTGTATTCCCTTGTTGTCCATGTAACTTGTTTCCATGTAGTTATTTGTATAAGGTTAATATTGAGAACTCATGTTGGAAGAGTGAGTTGTAACTGCTGAAAGAAGCTTGTACGTGTTATTGAGGGACAATTAGAGAAAACCATGGGAGTGAGAGAGAGTGTGAATCTCTGAACCTGAATTAGAGAGAAGTCTTGAGAGAATAAGAGGGAAAACGAGGGTGTGAGAGGGAGAAGGAGAAAGGAGATTTTGAAAGCTTGTATAATGGGAGGAATGAGGTTTACTATTGAAGACCTGTGAGGAAAGAGAGCCTTTGGTCTGAGTGTAATGAGGTTTTCAAAATCTTGAATGCTTCTCATAGTGAATGTAGGCAATATTGTTGAACCACTTTAAACCTCATGTTATTTCTCTTCTTTTGTTTCTAGACTAGTGTTGTTTTTTGTGTTTTTGTCAAGCCACCAATTACTAAGTTCTATGAGAGGAAGGGTAGAAAAGGGAATTCTCCAACTAGTTAATTAGGGGTAGATCGTGCTGAAGGTGGAAACTAGAGGGGACCACTTGGATTGCAGATGAGAGACTTGCGTTGTGTTTTCTGTTTGATAGGGGCATTAGGGAGTATATATTATGAGTATTGTTTTCTTTCTTGTCTATGTTGAATTTCTAGTTAAAGTGTGAGGGAGAGGAGAGGTTACCAACCCTCTTGAACTGGTTTGGAGTTTTTGTATTGCCTTAGGGCTATTTTCTTCCTCGTAATATCAATATATTGTAAGGACAAACCTTACAAATTGGTATCACAACATAATTCACCTGGATGAGGTTTGGAAAGATGACTTAAAAAAGGATCGAGGAAAGGCTCGATGTTACGAATTAAAAGATGGGAAGCATGAAGGAGAGTGTCTAGAGGATACCTACAATTGAAGAGGGAATGGCATGGATAAAGAAGATTTTAGCAACCATGGTAGTTGCAATGATGATGTTATGTTCACGACCAACATCATCCATTGTGGTTGATGATTCTGAGCAGAAAAGAAAAGAATAGACCGAATAGGGAGAGACGACTAGAGCCAGTGGAGAAGAGACTTTCAAAACGATCACGAGAAAGTAGAGTAGACAATTGGAGATTGAAGCAAGTTTAAGGTGGAGATGTTGGTTTTTGGAGGAGATGATTCAGACTCATGGTTATTTTGCAGCAATAGGTATTTCCAAATCCATAAACTTATCGATTCTGAGAAATTAACAGTTGTGGTGGAGAGTTTTGAAGGGGTGGTGTTGAACTAGTATTGTACGAAGGAGGAGAGAGCCCTTAAAAGACTGGAATGATTTGCTTGCTCGAATGTTTCCGAAGGATTAAGAAGGGTAGTGTGTGTGGACGGTTTCTCGCCATGAAACAGGAAACAACCGTAACCAAATACTGTGAAGATTTTGAAGAGCTGATGGTGCCATTACCGCACTTGACGGATGAGGTGTTAAAGAATACCTTCATGAATGGGTTGAATCTAGTGGTGAAGGCAGAGATATTGTGCTGGCGGCTCATGGGGCTGGATGACTGTTGGACAAAGCCCAACTCATTAAAGATCGAGAAATGACCCATGAGGAGGCTGAGAAACCCGAGACATGGACTAGAAGGCAACAATCGAGGGATTTGAAATCGAGTTGAGCATCAAAGAAAGAGAGCTCAAAGATAGTTGAAACAATCCCCATGTGTAAGATTACCTTATCAAGTAGCACTACTTAGGCACCATGAAAGAAATGAAGGAAACAATTATCAGATGCTGAATTTCAAGCTAGGAAGGAGAAGGGCTTGTGTTTTTTATGTGAAGAGAAATATACTGTAGGGCATCGGTGCAAGGCGAAGAAGTTTAGAGCCATGATTGTCCATGGAGATGAGGAAGAACCTGGAATTATCGAAGAAGATAGTGCAGTAAGAGAGCCCAGCCACAGTTGGAAAAGAAATGGGGGATGTAGCTGAGTTGTCTCTAAATTCGGTAGTAGGATTCACTGGTCTAGACACGTTTAAGATGAAGGGTAAAATAGATTTGCAAGAGGTAATTGTGTTGATCATTGTGGAGCAGCCCACAACTTCATCTCACAACGCATTGTCAATTCCTTGAAACTTTAACTAACAGAGACAACCAACTATGGTATCATTATGGGCTTTGGTATGGCAGTGAAAGGGAAGGGAGTCTGTAAAGGCGTGGTACTGTCCTTAGGGGAGTTGATGGTGGTAGAGAGTTTTATGCTCCTTAAACTAGTTGGAGTGGATGTAGTGTTGAGAATGCAATGGCTTTGTACCCTGGGGGAGACTAGAGTGGATTGGACAACATTGGTCATTTGAATGGAAAATGGAGAGGAAACCATAACCCTGAAGGGAGACTCGAGTCCGACAAAAAACAAAAATATCCTTGAAAAAGATGATGAAGACATGAGAAGAAAATGATCAACGCTTCATGGTAGAGTTTAAAGCATTGGAAGCCATCAACAGTTATGTTGAGTTCAACTCAATTATTCGGAGTTAGGATAACCTACTTAGGCACCAAACGCCTTACCGCCTCAACGAGAAATTGACCATAGAATACATCTGAAGGAAGGAACCCAATTGATGGCGTTCAACCTTATCATTACCCGCAAGTCCAAAAGGGAGAGATTGAGAGGTTGGTTGATGAGATGTTAACTGCGGGAGTAATATGACCTAGTATCAGCCCTTACTCAAGTCTGGTGTTGCTAGTAAAGAAGAAGGATAGTGGTTAGTAGTTTTTTGTTGATTACGACGCATTAATCAATGTCACAGTACCTAATAAGTTCCCAATTCTGATAGTTGAAGAGTTGCGAGATGAATCCCATTAATCTAGTTGTAGAAGAATGGAATGAGCAAGCAACAAAAGCATTTGAATGATTGAAGAACGCGATGATAATGCTCCCGGTATTGGCTTTGCCCGATTACAACCGTGGTGGAAACCGCCATTTCTAGTATGAGATTAGGGGCAGTTTTGTATTAGGAGAAGAAATCGATTGCATACTACAGTCATACTTTGTCTGCAAAAGCCCAACTAAATTCGATTTATGAACAAGAATTGATGGCAATTGTGTTTGCGGTTCAACGTTGGCAGCCATATTTATTGGGGTTCATTGTTCGAACCTATGAAGCACAGACACGTGAAAATGGGGGAAGAATCCGTGTTAGACACATGTTGGACATGGATACGTCTGAACACATGTCGGACACGCAAATTTATGTGTCCTATTTTTTTTTTAATTTTTTAATTATGGACATGCTGGGACACGGGTAGATACGTCACAAGACACACTGCCTTTTGAAAATTAAAACGATTGGCCCAAATTTAAAGCCCAATACTCTGGGCTTCTATTTAATTAAAAAAAAAGAAAAACATACAGAAGCCCTATTTTTCTTTCGATAGGAAGCACGCAACAACTTCCTTCTTCTTCACGATTTCATTTGGCCATTTTCCTTCTCTCGCTTGTCACCGCCGGTGCCGTCGGATGTCTTCACTGCCGCCAGAAGTTACCTCCAAATGCTTCAGAAGTACCCACAGATAAACGGTAGAATTTGCCTCCAAATTCTTCCGTCGTCAACCTTTTTTTCTTTGTAGGTTTAACTGCTTAAGTTTTTCTTTTCTTTTTTTTTAAACCTCCTTAAAGTTAACCTAGACAAGATACGCCCAACCCAGCCCACTGAAAGTTGCCTCCAAATACCATATACCATAGATACTAGATAGGCCTAGCCCAATGAAAGAATTATTTTTAAATTAAAAAAAGGAATGATGAAATTAAACTACTTTCAAGAAAAATCTATATATACACTAAATTTTTAAAAAAATCTATATATATACTATTTTTTTTTTAAAAAAATTTATATATATACTAATTTTTTTTTTTTTTAAAAAAACAAGGTATCCTCAACGTGTTCGTGTCCTAGTTTTTTAGAAATTGACGTATCGCCGTGTCCTGTCGTGTTCGTGTTTGTGTCCCGTGTCTGTGCTTCTTAGGTTTGAACAGACCAACGTGCTTTGAAGTACTTGTTGGAATAGAAAGTCATACAACCCCAATACTAGAAGTGGTTATCTCAACTATTGGGCTACGATTTCGAACTTTGGTTCCGACCAGGACCTGAGAAGAAAGTGGTTGATGCCTTTCGTGTGTAACTCCAGTGGCACATTTTGCTCAATTGATAGCACCAGCAATCCTCAATGTAGAGGTGGTCAATCGAGAAGTAGAATAAGATCCAAAGTTGATGTAGATTATCCAATAATCTACCCTTTCCAATATGCCCACATATTTTATGTCATTGTTCAAAATGCCCCTATTAAGATTGCCAATTCGATTGAGAATATCCTTGGGGATTTCTTTTGGGAAGGAGCAAATGTGAAATGGGATATAACACAACGCCCCCTTCAAAATTAAGGGGAGTGGTGCCACTATCCAGGGGGGAAGGAGGGGTAGTGGCTCAGGGGAGAGTTGGTCATTGGTCTCTTGGTCCCTATATAGAATAGCTTTTGGATTGTGGAAGACATCCCATTCATTCGACACAGTTACTCTTGTCACGTATTTGAGTAGATAAAGGTAAAATTGGGGGTGTTGGCCCGACCATTGCATCAGTGTTGTCTTGCTTGTGTTGTGTTCTTCCTTACTTGTGTCCCTTGTATGATGTATCTTGGGAAGAGTACATTAATTAAATAGAGAACTCTTAGCATCACACAAAGCAAAAATTCTGAAAAAATTCTTATTTTAATTTTAGCTCTAGGACAAGTGGTATCTGCGTGTGGTTTTCATGTTGAGAATCTGTTGCGATATCACTTGCTTTCTTTGCAATTTGTGTTTGGTTTTCTTTCCAAGGAAATACCTTGTCTTGTTGATAAAATTTTCTGTTTGTTTTGTAGAAATGGATAGAATACTTGAGGGTTAGGTAAAAACTCCAAGTTTATAGTTATGATTTTTGTTTCCAGCAAGCTTTCTATTTCTCTGTAACTATTTTGTTGTTTTCTTGGAAGTTATTTGTTACTTTGTTAATGTGCGTGCAAGTTGGTCATGACACTCACTAATATAAAAATAAAAATCATTATTTTATAGAACTTTGTTTAGAGATTTTCCCCCTCGTAACAAAGTTTTGAGTGATTTACTTCGTTGAAATATAAAGAAATCGTCCTTGGTCCTAACAACTATCCCGTGAAAATAAAAAATAGTATAGACATTACAGCAAATATACTTGATGGTTGTTGTGTTCTTGAGGAAAATCCAGATTTGTGGAAATGGTTAA

mRNA sequence

ATGAGAATGGCGACTTTTAGAAGGGCTTTGATCAAAGCTCATCAACTTCTGTACTCGGAAACCTCCACCATTTTGAGCAGCAAATCAATTCCCATCTTGTATAGCGCTTCTATTGGTTTGGAGAACCCACAAACCCGATTATCGAATCACTGTCAGAATCACCATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCGACGATTACAAATCCTCTACAAACAGATATCGACCTCTCAAATGATGAGAGCAGGAGGCGCTTGTTCACTAGGCTGCTGTACCAGAGCAAACAACGAGGGTTTCTGGAATTGGATTTGGTACTTGGGAAATGGGTAGAGGATCACATCAATTCCTTGGATGCAGATGGTATCAAAGCTCTGATTAATGTTCTTGACCTGATTTGTGGAAATGGTTAA

Coding sequence (CDS)

ATGAGAATGGCGACTTTTAGAAGGGCTTTGATCAAAGCTCATCAACTTCTGTACTCGGAAACCTCCACCATTTTGAGCAGCAAATCAATTCCCATCTTGTATAGCGCTTCTATTGGTTTGGAGAACCCACAAACCCGATTATCGAATCACTGTCAGAATCACCATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCGACGATTACAAATCCTCTACAAACAGATATCGACCTCTCAAATGATGAGAGCAGGAGGCGCTTGTTCACTAGGCTGCTGTACCAGAGCAAACAACGAGGGTTTCTGGAATTGGATTTGGTACTTGGGAAATGGGTAGAGGATCACATCAATTCCTTGGATGCAGATGGTATCAAAGCTCTGATTAATGTTCTTGACCTGATTTGTGGAAATGGTTAA

Protein sequence

MRMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADGIKALINVLDLICGNG
Homology
[Close]
BLAST of Lcy06g013000 vs. ExPASy Swiss-Prot
Match: Q9FI44 (Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDHAF2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.4e-18
Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHH 62
           MAT R+ALI  H+++ S      S+I+   +++S PI++   + L               
Sbjct: 1   MAT-RKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLG-------------- 60

Query: 63  GCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHIN 122
                F C +T  +    DIDLSN+E++RR   RLLY+SKQRGFLELDLVLG WVE+++N
Sbjct: 61  ---ARFFCENT-ASAQNFDIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVN 117

Query: 123 SLDADGIKALINVLDL 132
           S+D +G+K+LI+VL+L
Sbjct: 121 SMDENGVKSLIHVLNL 117

[Close]
BLAST of Lcy06g013000 vs. ExPASy TrEMBL
Match: A0A6J1JZA0 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111490192 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.7e-46
Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSF 62
           MATFRRAL+KAH++LY   +ST+  SKS+P+L SA I LEN Q RL NH QN HGCFFSF
Sbjct: 1   MATFRRALVKAHEVLYLKPSSTVFRSKSMPLLPSAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 63  RCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADG 122
           RCSST  NPL TDIDLSN+ES+RRLF RLLY+SKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTSVNPLFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 123 IKALINVLDL 132
           I ALI VLDL
Sbjct: 121 ISALIKVLDL 130

[Close]
BLAST of Lcy06g013000 vs. ExPASy TrEMBL
Match: A0A6J1EQG7 (succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111436468 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.3e-46
Identity = 99/130 (76.15%), Postives = 112/130 (86.15%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSF 62
           MATFRRA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSF
Sbjct: 1   MATFRRAVLKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 63  RCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADG 122
           RCSST  NPL TDIDLS++ES+RRLF RLLY+SKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTTVNPLFTDIDLSDEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 123 IKALINVLDL 132
           I+ALI VLDL
Sbjct: 121 IRALIKVLDL 130

[Close]
BLAST of Lcy06g013000 vs. ExPASy TrEMBL
Match: A0A6J1C101 (uncharacterized protein LOC111007362 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007362 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43
Identity = 93/130 (71.54%), Postives = 109/130 (83.85%), Query Frame = 0 

Query: 2   RMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSF 61
           RMATF RA+IKAH++LY ET  IL  K++P +  A IGLEN QTRL++H Q+ HG FFSF
Sbjct: 99  RMATFIRAMIKAHRVLYMETPAILRRKTMPFMSGAFIGLENLQTRLTDHYQSQHGSFFSF 158

Query: 62  RCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADG 121
           R SST  NPL TDIDLSN+ES+RRLF RLLY+S+QRG LELDL+LGKWVEDHI S+DADG
Sbjct: 159 RSSSTNKNPLPTDIDLSNEESKRRLFNRLLYRSRQRGLLELDLILGKWVEDHIKSMDADG 218

Query: 122 IKALINVLDL 132
           IKALI+VLDL
Sbjct: 219 IKALISVLDL 228

[Close]
BLAST of Lcy06g013000 vs. ExPASy TrEMBL
Match: A0A6J1C0N3 (succinate dehydrogenase assembly factor 2, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007362 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.6e-43
Identity = 92/129 (71.32%), Postives = 108/129 (83.72%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFR 62
           MATF RA+IKAH++LY ET  IL  K++P +  A IGLEN QTRL++H Q+ HG FFSFR
Sbjct: 1   MATFIRAMIKAHRVLYMETPAILRRKTMPFMSGAFIGLENLQTRLTDHYQSQHGSFFSFR 60

Query: 63  CSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADGI 122
            SST  NPL TDIDLSN+ES+RRLF RLLY+S+QRG LELDL+LGKWVEDHI S+DADGI
Sbjct: 61  SSSTNKNPLPTDIDLSNEESKRRLFNRLLYRSRQRGLLELDLILGKWVEDHIKSMDADGI 120

Query: 123 KALINVLDL 132
           KALI+VLDL
Sbjct: 121 KALISVLDL 129

[Close]
BLAST of Lcy06g013000 vs. ExPASy TrEMBL
Match: A0A0A0LKF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072460 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.2e-40
Identity = 93/131 (70.99%), Postives = 109/131 (83.21%), Query Frame = 0 

Query: 2   RMATFRRALIKAHQLLYSETS-TILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFS 61
           +MATF RAL KAHQ+LY + S TIL SKS+P+L +A IGL+N Q  L+N  QNHHGCF S
Sbjct: 67  QMATFIRALNKAHQVLYLKASPTILRSKSMPLLPTAFIGLKNLQRELTNRNQNHHGCFSS 126

Query: 62  FRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDAD 121
              SST TNP   DIDLSN++S+R+LF RLLY+SKQRGFLELDL+LGKWVEDHI+SLDAD
Sbjct: 127 VHFSSTSTNP---DIDLSNEDSKRQLFNRLLYRSKQRGFLELDLILGKWVEDHIHSLDAD 186

Query: 122 GIKALINVLDL 132
           GI+ALINVLDL
Sbjct: 187 GIRALINVLDL 194

[Close]
BLAST of Lcy06g013000 vs. NCBI nr
Match: XP_022994486.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 3.5e-46
Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSF 62
           MATFRRAL+KAH++LY   +ST+  SKS+P+L SA I LEN Q RL NH QN HGCFFSF
Sbjct: 1   MATFRRALVKAHEVLYLKPSSTVFRSKSMPLLPSAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 63  RCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADG 122
           RCSST  NPL TDIDLSN+ES+RRLF RLLY+SKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTSVNPLFTDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 123 IKALINVLDL 132
           I ALI VLDL
Sbjct: 121 ISALIKVLDL 130

[Close]
BLAST of Lcy06g013000 vs. NCBI nr
Match: XP_022930034.1 (succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita moschata])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 99/130 (76.15%), Postives = 112/130 (86.15%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSF 62
           MATFRRA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSF
Sbjct: 1   MATFRRAVLKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 63  RCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADG 122
           RCSST  NPL TDIDLS++ES+RRLF RLLY+SKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTTVNPLFTDIDLSDEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 123 IKALINVLDL 132
           I+ALI VLDL
Sbjct: 121 IRALIKVLDL 130

[Close]
BLAST of Lcy06g013000 vs. NCBI nr
Match: KAG7032455.1 (Succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 99/130 (76.15%), Postives = 111/130 (85.38%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSF 62
           MATFRRA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSF
Sbjct: 1   MATFRRAVVKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHNQNQHGCFFSF 60

Query: 63  RCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADG 122
           RCSST  NPL  DIDLSN+ES+RRLF RLLY+SKQRGFLELDLVLGKWVEDHINSLDADG
Sbjct: 61  RCSSTTVNPLFPDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADG 120

Query: 123 IKALINVLDL 132
           I+ALI VLDL
Sbjct: 121 IRALIKVLDL 130

[Close]
BLAST of Lcy06g013000 vs. NCBI nr
Match: XP_022135400.1 (uncharacterized protein LOC111007362 isoform X1 [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43
Identity = 93/130 (71.54%), Postives = 109/130 (83.85%), Query Frame = 0 

Query: 2   RMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSF 61
           RMATF RA+IKAH++LY ET  IL  K++P +  A IGLEN QTRL++H Q+ HG FFSF
Sbjct: 99  RMATFIRAMIKAHRVLYMETPAILRRKTMPFMSGAFIGLENLQTRLTDHYQSQHGSFFSF 158

Query: 62  RCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADG 121
           R SST  NPL TDIDLSN+ES+RRLF RLLY+S+QRG LELDL+LGKWVEDHI S+DADG
Sbjct: 159 RSSSTNKNPLPTDIDLSNEESKRRLFNRLLYRSRQRGLLELDLILGKWVEDHIKSMDADG 218

Query: 122 IKALINVLDL 132
           IKALI+VLDL
Sbjct: 219 IKALISVLDL 228

[Close]
BLAST of Lcy06g013000 vs. NCBI nr
Match: KAG6601703.1 (Succinate dehydrogenase assembly factor 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.5 bits (467), Expect = 6.1e-43
Identity = 94/125 (75.20%), Postives = 106/125 (84.80%), Query Frame = 0 

Query: 8   RALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSST 67
           RA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSFRCSST
Sbjct: 281 RAVVKAHQVLYLKPSSTVFRSKSMPLLPTAYILLENLQGRLPNHIQNQHGCFFSFRCSST 340

Query: 68  ITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHINSLDADGIKALI 127
             NPL  DIDLSN+ES+RRLF RLLY+SKQRGFLELDLVLGKWVEDHINSLDADGI+ALI
Sbjct: 341 TVNPLFPDIDLSNEESKRRLFNRLLYRSKQRGFLELDLVLGKWVEDHINSLDADGIRALI 400

Query: 128 NVLDL 132
            VLDL
Sbjct: 401 KVLDL 405

[Close]
BLAST of Lcy06g013000 vs. TAIR 10
Match: AT5G51040.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631). )

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19
Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHH 62
           MAT R+ALI  H+++ S      S+I+   +++S PI++   + L               
Sbjct: 1   MAT-RKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLG-------------- 60

Query: 63  GCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHIN 122
                F C +T  +    DIDLSN+E++RR   RLLY+SKQRGFLELDLVLG WVE+++N
Sbjct: 61  ---ARFFCENT-ASAQNFDIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVN 118

Query: 123 SLDADGIKALINVLDLI 133
           S+D +G+K+LI+VL+L+
Sbjct: 121 SMDENGVKSLIHVLNLV 118

[Close]
BLAST of Lcy06g013000 vs. TAIR 10
Match: AT5G51040.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631); Has 532 Blast hits to 532 proteins in 207 species: Archae - 0; Bacteria - 285; Metazoa - 16; Fungi - 41; Plants - 40; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 3.8e-19
Identity = 58/136 (42.65%), Postives = 85/136 (62.50%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHH 62
           MAT R+ALI  H+++ S      S+I+   +++S PI++   + L               
Sbjct: 1   MAT-RKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLG-------------- 60

Query: 63  GCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHIN 122
                F C +T  +    DIDLSN+E++RR   RLLY+SKQRGFLELDLVLG WVE+++N
Sbjct: 61  ---ARFFCENT-ASAQNFDIDLSNEENKRRTINRLLYRSKQRGFLELDLVLGNWVEENVN 117

Query: 123 SLDADGIKALINVLDL 132
           S+D +G+K+LI+VL+L
Sbjct: 121 SMDENGVKSLIHVLNL 117

[Close]
BLAST of Lcy06g013000 vs. TAIR 10
Match: AT5G51040.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 (InterPro:IPR005631); Has 368 Blast hits to 368 proteins in 141 species: Archae - 0; Bacteria - 216; Metazoa - 8; Fungi - 13; Plants - 40; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 0 

Query: 3   MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHH 62
           MAT R+ALI  H+++ S      S+I+   +++S PI++   + L               
Sbjct: 1   MAT-RKALINVHRIIRSTAVVGRSSIIPAAANRSYPIIFRNGVDLG-------------- 60

Query: 63  GCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWVEDHIN 122
                F C +T  +    DIDLSN+E++RR   R    SKQRGFLELDLVLG WVE+++N
Sbjct: 61  ---ARFFCENT-ASAQNFDIDLSNEENKRRTINR----SKQRGFLELDLVLGNWVEENVN 113

Query: 123 SLDADGIKALINVLDL 132
           S+D +G+K+LI+VL+L
Sbjct: 121 SMDENGVKSLIHVLNL 113

The following BLAST results are available for this feature:
BLAST of Lcy06g013000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FI445.4e-1842.65Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana... [more]
BLAST of Lcy06g013000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JZA01.7e-4677.69succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita maxima OX=... [more]
A0A6J1EQG78.3e-4676.15succinate dehydrogenase assembly factor 2, mitochondrial OS=Cucurbita moschata O... [more]
A0A6J1C1011.7e-4371.54uncharacterized protein LOC111007362 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1C0N36.6e-4371.32succinate dehydrogenase assembly factor 2, mitochondrial isoform X2 OS=Momordica... [more]
A0A0A0LKF95.2e-4070.99Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072460 PE=4 SV=1[more]
BLAST of Lcy06g013000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022994486.13.5e-4677.69succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita maxima][more]
XP_022930034.11.7e-4576.15succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita moschata][more]
KAG7032455.11.7e-4576.15Succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita argyrosperma... [more]
XP_022135400.13.6e-4371.54uncharacterized protein LOC111007362 isoform X1 [Momordica charantia][more]
KAG6601703.16.1e-4375.20Succinate dehydrogenase assembly factor 2, mitochondrial, partial [Cucurbita arg... [more]
BLAST of Lcy06g013000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G51040.31.7e-1942.34unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G51040.13.8e-1942.65unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 ... [more]
AT5G51040.21.2e-1540.44unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF339 ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036714Flavinator of succinate dehydrogenase superfamilyGENE3D1.10.150.250Flavinator of succinate dehydrogenasecoord: 72..132
e-value: 2.8E-11
score: 44.8
IPR036714Flavinator of succinate dehydrogenase superfamilySUPERFAMILY109910YgfY-likecoord: 86..130
IPR005631Flavinator of succinate dehydrogenasePFAMPF03937Sdh5coord: 89..131
e-value: 3.1E-11
score: 43.1
NoneNo IPR availablePANTHERPTHR12469:SF5FLAVINATOR OF SUCCINATE DEHYDROGENASEcoord: 4..131
NoneNo IPR availablePANTHERPTHR12469PROTEIN EMI5 HOMOLOG, MITOCHONDRIALcoord: 4..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g013000.1Lcy06g013000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009060 aerobic respiration
biological_process GO:0044238 primary metabolic process