Lcy06g012980 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g012980
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein
LocationChr06: 18131343 .. 18133433 (+)
RNA-Seq ExpressionLcy06g012980
SyntenyLcy06g012980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGAGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGTCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCATGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGGTATGGACACTATACGTTTGCACACATCGTTAAGATTTTACAACGTCCTTCTGACATTTGTAATGCGATGTGGAAACAGAATTGTTTAGGTGCATTGGACGGTACGTACATGGTCCATGTTAGTGCAGCTGATCGACCAAGGTATAGGACGCGAAAGGGTGAGATTGCAACAAATGTATTGGGCGTCGTGTCCCCAAAAGGTGAATTCATTTTTGTTATGCCGGGATGGGAAGGTTCGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCCCAATGGACTAATAGTGCCGAAGGGTATGGAACGAAATATGAATGTAAAATAGGATCGATTACGTCATCCTTTGGTATTAAACATCTTTTATGAACAAGTTACTACTACCTCTGTGATGCCGGGTACCCAAACGCAGAGGGTTTCTTGGCACCTTATAGAGGAGAGCGGTACCACTTAACCGAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCACGGAATGTTATCGAGAGAGCATTCGGTGCTCTAAAAGGACGGTGGGCGATACTTCGGGGGAAGTCCTACTACCCTGCTCGGACCCAGTGTCGAATCATAACAGTGTGCTGTTTACTCCACAACCTTATCACCCGGGAGATGGGTCTGGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACCTGTACCTCTAGATGGTGAGAACATAACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACACGTGGGGGCAACATAATCCCTGATCCAGTTTCGAAATACGACTATCTGCTATGTTGTAATTTATATAGTTTTGACATTTCTTCGGCCTTACATTTTTTCTACAATCTAAACGATGTATTCAATGTAACTCAATTTAGATTTATGGAAAACAATCGTTCATGTCGTTATTCTACATTATGTTTCTAACTTCTTGTCTGCGATTACTTCATAACTAAGTATCCTACATTATGTCGCCGATTGTGTGAATTGATCAGAATACATACTTACAAAATCTGATGACACAATACTTTATCCATGTAGACTAATGGCAGGTGGAGAGAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACATCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGGTACGAACATTAGTTATTCATTGATGTAACTCATGTACAATATCGTTGATAAAACACTCTTCAATACATGCAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAAGCAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCACCCCTCCAGACATTAATCTGGCCGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCCTCCTAG

mRNA sequence

ATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGAGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGTCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCATGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGAATTGTTTAGGTGCATTGGACGGTACGTACATGGTCCATGTTAGTGCAGCTGATCGACCAAGGTATAGGACGCGAAAGGGTGAGATTGCAACAAATGTATTGGGCGTCGTGTCCCCAAAAGGTGAATTCATTTTTGTTATGCCGGGATGGGAAGGTTCGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCCCAATGGACTAATAGTGCCGAAGGAGGGTTTCTTGGCACCTTATAGAGGAGAGCGGTACCACTTAACCGAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCACGGAATGTTATCGAGAGAGCATTCGGTGCTCTAAAAGGACGGTGGGCGATACTTCGGGGGAAGTCCTACTACCCTGCTCGGACCCAGTGTCGAATCATAACAGTGTGCTGTTTACTCCACAACCTTATCACCCGGGAGATGGGTCTGGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACCTGTACCTCTAGATGGTGAGAACATAACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACACACTAATGGCAGGTGGAGAGAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACATCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAAGCAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCACCCCTCCAGACATTAATCTGGCCGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCCTCCTAG

Coding sequence (CDS)

ATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGTAGACGTGGAAGAGATGGTCGCAATGTTCTTGCACATCGTTGCTCATGATGTTAAGAATCGAGTCATTAGAAGACAGTTTGCACGGTCGGGAGAAACCGTTTCTCGACACTTCAACGCGACTTTGAGTGTCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCATGACTTCTTGCCAAGATGGGAGGTGGAAATGGTTTGAGAATTGTTTAGGTGCATTGGACGGTACGTACATGGTCCATGTTAGTGCAGCTGATCGACCAAGGTATAGGACGCGAAAGGGTGAGATTGCAACAAATGTATTGGGCGTCGTGTCCCCAAAAGGTGAATTCATTTTTGTTATGCCGGGATGGGAAGGTTCGGCTGCTGATTCTCGTGTACTCAGAGATGCTATATCACGCCCCAATGGACTAATAGTGCCGAAGGAGGGTTTCTTGGCACCTTATAGAGGAGAGCGGTACCACTTAACCGAGTGGCGTGGGGGAGGCAATCCACCTACTACACCAAGAGAGTTCTTCAACATGAAGCATTCTTCTGCACGGAATGTTATCGAGAGAGCATTCGGTGCTCTAAAAGGACGGTGGGCGATACTTCGGGGGAAGTCCTACTACCCTGCTCGGACCCAGTGTCGAATCATAACAGTGTGCTGTTTACTCCACAACCTTATCACCCGGGAGATGGGTCTGGATGTTGGATTGGATGAAGGTGATGTTGGTCGATCTGAACCTGTACCTCTAGATGGTGAGAACATAACCTTCATTCAAAGCTCCACTGAATGGACGCAAAAGCGAGATGACCTAGCGAACAGGATGTTCAACACACTAATGGCAGGTGGAGAGAAACAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGCCGGATACCTAGCCCGACTGAAGCGGATGATAAAAGATAAAATGCCGACCTGCACCATAGAGTCAACATCCGTAATAGACTGCAAGGTGAGGTCCTTGAAACGGCAATACAGTGCCATCTCGGAGATGCTGGGTCCGGGCTGCAGCGGATTTGGTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCGGCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAAGCAGACAGCACCCACGGGGACGACGAGGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCACCCCTCCAGACATTAATCTGGCCGCGGACATGGACTTCGAGGACGTCCCCATCACACCGACAAGCCGACCAAGCACTGCAGGGTCCTCCTAG

Protein sequence

MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYMVHVSAADRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPKEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITVCCLLHNLITREMGLDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLANRMFNTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPTPPDINLAADMDFEDVPITPTSRPSTAGSS
Homology
BLAST of Lcy06g012980 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.7e-14
Identity = 58/182 (31.87%), Postives = 80/182 (43.96%), Query Frame = 0

Query: 97  NCLGALDGTYMVHVSAADRPRYRT---RKGEIATNVLGVVSPKGEFIFVMPGWEGSAADS 156
           NC GA+D T++V    A  P  +     +   +  +  VV P   F+ V+ GW GS  D 
Sbjct: 182 NCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLNDD 241

Query: 157 RVLRDA--------ISRPNGLIVPKEGFLAPYRGERYHLTEWRGG--------------- 216
            VL+++          R NG  +P          ER  L E+  G               
Sbjct: 242 VVLKNSGFYKLVEKGKRLNGEKLP--------LSERTELREYIVGDSGFPLLPWLLTPYQ 301

Query: 217 GNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQC-RIITVCCLLHN 252
           G P + P+  FN +HS A    + A   LK RW I+ G  + P R +  RII VCCLLHN
Sbjct: 302 GKPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCCLLHN 355

BLAST of Lcy06g012980 vs. ExPASy Swiss-Prot
Match: Q94K49 (Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.3e-12
Identity = 83/311 (26.69%), Postives = 132/311 (42.44%), Query Frame = 0

Query: 6   FAILCSLL------RTTSGLVGTE--IVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGET 65
           F+ +CSL+      R  SGL+  E  ++ VE+ VA+ L  +A       +   F     T
Sbjct: 76  FSYICSLVREDLISRPPSGLINIEGRLLSVEKQVAIALRRLASGDSQVSVGAAFGVGQST 135

Query: 66  VSRHFNATLSVVLRLYDVLLKKPE-----PIMTSCQDGRWKWFE-----NCLGALDGTYM 125
           VS+       V  R  + L ++ +     P     ++ + K+ E     NC GA+D T++
Sbjct: 136 VSQ-------VTWRFIEALEERAKHHLRWPDSDRIEEIKSKFEEMYGLPNCCGAIDTTHI 195

Query: 126 V----HVSAADRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDA---- 185
           +     V A+D   +  ++   +  + GV   +  F+ ++ GW G    S++L+ +    
Sbjct: 196 IMTLPAVQASD--DWCDQEKNYSMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSGFFK 255

Query: 186 ------ISRPNGLIVPKEGFLAPY--RGERYHLTEW---RGGGNPPTTPREFFNMKHSSA 245
                 I   N   + +   +  Y   G  Y L  W       + P+     FN +H   
Sbjct: 256 LCENAQILDGNPKTLSQGAQIREYVVGGISYPLLPWLITPHDSDHPSDSMVAFNERHEKV 315

Query: 246 RNVIERAFGALKGRWAILRGKSYYPARTQC-RIITVCCLLHNLITREMGLDVGLDEGDVG 279
           R+V   AF  LKG W IL    + P R +   II VCCLLHN+I         +D GD  
Sbjct: 316 RSVAATAFQQLKGSWRILSKVMWRPDRRKLPSIILVCCLLHNII---------IDCGDY- 367

BLAST of Lcy06g012980 vs. ExPASy TrEMBL
Match: E5GBB2 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.7e-160
Identity = 296/526 (56.27%), Postives = 363/526 (69.01%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRR FAILC LLR  +GL  TEIVDVEEMVAMFLH++AHDVKNRVI+++F RSGETVSR
Sbjct: 15  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFVRSGETVSR 74

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L  VLRLY+ L+K+P P+ ++C D RWK FENCLGALDGTY+ V+V A DRP +R
Sbjct: 75  HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 134

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
           TRKGEIATNVLGV   KG+F++V+ GWEGSAADSR+LRDAIS+ NGL VPK         
Sbjct: 135 TRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPKGYYYLCDAG 194

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
               EGFLAPY+G+RYHL EWRG  N PT  +E+FNMKHSSARNVIERAFG LKGRW IL
Sbjct: 195 YPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTIL 254

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREMGLDVGLDEGDVGRSE-PVPLDGENITFIQSS 300
           RGKSYYP + QCR I  C LLHNLI REM     +++ D G S        E+I +I+++
Sbjct: 255 RGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETT 314

Query: 301 TEWTQKRDDLANRMF-NTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFR 360
            EW+Q RDDLA  MF +    GG+                   +ELV  GGW+ DNGTFR
Sbjct: 315 NEWSQWRDDLATSMFTDWQFRGGD----------------SCGMELVSMGGWKSDNGTFR 374

Query: 361 AGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCI 420
            GYLA+L RM+ +K+  C + +T+VIDC++++LKR + AI+EMLGP CSGFGWNDE KCI
Sbjct: 375 PGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCI 434

Query: 421 QAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGD-- 480
            AE+E++D WV+S  AAKGLLN PFP+Y++L +VFG+DRA+G      A+   +  G   
Sbjct: 435 VAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGY 494

Query: 481 ---DEGDQNVQAEQDCYVPTPPDINLAADMDFEDVPITPTSRPSTA 506
              D GD N           PP  +   D+  +DV     SRPS A
Sbjct: 495 DRFDMGDGNED--------FPPVYSRGVDILQDDV---RASRPSRA 513

BLAST of Lcy06g012980 vs. ExPASy TrEMBL
Match: E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 8.5e-160
Identity = 292/507 (57.59%), Postives = 361/507 (71.20%), Query Frame = 0

Query: 15  TTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSVVLRLYD 74
           T +GL  TE+VDVEEMVAMFLHI+AHDVK+RVI+R+F RSGET+SRHFN  L  V+RL++
Sbjct: 57  TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHE 116

Query: 75  VLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYRTRKGEIATNVLGVV 134
            LLKKP+P+   C D RW+WFENCLGALDGTY+ V+V A+DR RYRTRKGE+ATNVLGV 
Sbjct: 117 ELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVC 176

Query: 135 SPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK-------------EGFLAPYRGE 194
             KG+F++V+ GWEGSAADSR+LRDA+SRPN L VPK             EGFLAPYRG+
Sbjct: 177 DTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQ 236

Query: 195 RYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRI 254
           RYHL EWRG  N P+T +EFFNMKH SARNVIERAFG LKGRWAILRGKSYYP   QCR 
Sbjct: 237 RYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRT 296

Query: 255 ITVCCLLHNLITREM---GLDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLAN 314
           I  CCLLHNLI REM    ++  +DE D   S       ++I +I++S EW+Q RD+LA 
Sbjct: 297 ILACCLLHNLINREMTNFDIEDNIDEVD---STHATTAADDIHYIETSNEWSQWRDNLAE 356

Query: 315 RMFNTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKD 374
                +M    +  KH WT++EEA LVE LVELV+ GGWR DNGTFR GYL +L RM+  
Sbjct: 357 E----IMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAF 416

Query: 375 KMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKS 434
           K+P   I + S ID +++ +KR + A++EM GP CSGFGWNDE KCI AE+EV+D W  S
Sbjct: 417 KIPGSNIHA-STIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--S 476

Query: 435 HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAE-QADSTHGDDEGDQNVQAEQDCY 494
           H AAKGLLNK F HY++L++VFGKDRA+GG     A+  ++   G D G  +   + D  
Sbjct: 477 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFP 536

Query: 495 VPTPPDINLAADMDFEDVPITPTSRPS 504
               P +N++ D    D+  T T+R S
Sbjct: 537 PMYSPGLNMSPD----DLMETRTARVS 549

BLAST of Lcy06g012980 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 9.7e-156
Identity = 293/518 (56.56%), Postives = 351/518 (67.76%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRRCFAILC LLRT +GL  TE+VDVEEMVAMFLHI+AHDVKNRVI+R+F RSGET+SR
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L  V+RL+D LLKKP+P+   C D RW+WFENCLGALDGTY+ V+V A+DR RYR
Sbjct: 127 HFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
           TRKGE+ATNVLGV   KG+F++V+ GWEGSAADSR+LRDA+SRPN L VPK         
Sbjct: 187 TRKGEVATNVLGVYDTKGDFVYVLTGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAG 246

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
               EGFLAPYRG+RYHL EWRG  N P+T +EFFNMKHSSARNVIERAFG LKGRWAIL
Sbjct: 247 YPNAEGFLAPYRGQRYHLQEWRGPKNAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL 306

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREM-GLDVGLDEGDVGRSEPVPLDGENITFIQSS 300
           RGKSY+P   QC  I  CCLLHNLI REM   D+                 +NI  + SS
Sbjct: 307 RGKSYHPVEVQCHTILACCLLHNLINREMTNFDI----------------EDNIVSMTSS 366

Query: 301 TEWTQKRDDLANRMFNTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRA 360
           +                      +  KH WT++EEA     LVELV+ GGWR DNGTFR 
Sbjct: 367 S----------------------RLPKHTWTKEEEA----GLVELVNAGGWRSDNGTFRP 426

Query: 361 GYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQ 420
           GYL +L RM+  K+P C I + S ID +++ +KR + A++EM GP CSGFGWNDE KCI 
Sbjct: 427 GYLNQLARMMAFKIPGCNIHA-STIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIV 486

Query: 421 AEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEG 480
           AE+EV+D W  SH AAKGLLNK F HY++L++VFGKDRA+GG        AD    +  G
Sbjct: 487 AEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE---SFADIGSNNPPG 536

Query: 481 DQNVQAEQDCYVPTPPDINLAADMDFEDVPITPTSRPS 504
                A+        P  +L  +M  +D+  T T+R S
Sbjct: 547 YDAFAADAVPDTDFSPMYSLGLNMSPDDLMETRTARVS 536

BLAST of Lcy06g012980 vs. ExPASy TrEMBL
Match: A0A5A7SYW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold147G00430 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 2.1e-142
Identity = 257/431 (59.63%), Postives = 313/431 (72.62%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRR FAILC LLR  +GL  TEIVDVEEMVAMFLHI AHDVKNRVI+R+F RSGETVSR
Sbjct: 40  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHIFAHDVKNRVIQREFVRSGETVSR 99

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L  VLRLY+ L+K+P P+ ++C D RWK FENCLGALDGTY+ V+V A DRP +R
Sbjct: 100 HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 159

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
           TRKGEIATNVLGV   KG+F++V+ GW+GSAADSR+LRDAISR NGL VPK         
Sbjct: 160 TRKGEIATNVLGVCDTKGDFVYVLAGWKGSAADSRILRDAISRENGLQVPKGYYYLCDAG 219

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
               EGFLAPYRG+RYHL EWRG  N PT  +E+FNMKHSSARNVIERAFG LKGRWAIL
Sbjct: 220 YPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAIL 279

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREMGLDVGLDEGDVGRSEPVPLDGENITFIQSST 300
           RGKS          +T C             D   DE +   +       E+I +I+++ 
Sbjct: 280 RGKSE---------MTYC-------------DDVEDEDEGDSTYATTTASEDIQYIETTN 339

Query: 301 EWTQKRDDLANRMF-NTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRA 360
           EW+Q RDDLA  MF +  M+   +  +H+WTR+EE  LVE L+ELV  GGW+ DNGTFR+
Sbjct: 340 EWSQWRDDLAASMFIDWHMSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRS 399

Query: 361 GYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQ 417
           GYLA+L RM+ +K+  C + +T+VIDC++++LKR + AI+EM GP CSGFGWNDE KCI 
Sbjct: 400 GYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIV 447

BLAST of Lcy06g012980 vs. ExPASy TrEMBL
Match: A0A803QNC5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 8.2e-139
Identity = 266/526 (50.57%), Postives = 343/526 (65.21%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRR F ILC  L+TT GL G++ VDVEEMVA+FLHI+AHDVKNR++RRQFARSGETVSR
Sbjct: 1   MDRRTFFILCHHLKTTGGLKGSKNVDVEEMVAIFLHIIAHDVKNRIVRRQFARSGETVSR 60

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L+ +L L+D+LLKKP  I   C D RWKWF+NCLGALDGTY+ V+V A++RPRYR
Sbjct: 61  HFNMVLNALLHLHDLLLKKPVAIRDDCIDERWKWFKNCLGALDGTYIKVNVLASNRPRYR 120

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
           TRK EIATNVLGVVS   +FI+V+PGWEGSAADSRVLRDAI R NG  VP+         
Sbjct: 121 TRKNEIATNVLGVVSQDMQFIYVLPGWEGSAADSRVLRDAIHR-NGFKVPQGYYYLCDAG 180

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
               EGFL PYRG+RYHL +W    +PP +PREFFNM+HSSARNV+ERAFG LKGRWAIL
Sbjct: 181 YPNGEGFLTPYRGQRYHLNDWT---HPPNSPREFFNMRHSSARNVVERAFGLLKGRWAIL 240

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREMGLDVGLDEGDV--GRSEPVPLDGENITFIQS 300
           R +SYYP + QCRII                      GD+    S+  P+ G        
Sbjct: 241 RSRSYYPVKIQCRIIL---------------------GDIMEATSQSTPIGG-------- 300

Query: 301 STEWTQKRDDLANRMFNTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFR 360
                                     +KH WT  ++++LVE LV++ + G W+ DNGTF+
Sbjct: 301 --------------------------RKHQWTSIQDSKLVECLVDMCNSGKWKADNGTFK 360

Query: 361 AGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCI 420
            GYL +L++M+ D++P   I++   ID +++ LKRQY+AIS+MLGP  SGFGWN++ KC+
Sbjct: 361 PGYLQQLEKMMNDRIPNSGIKAQPHIDSRLKILKRQYTAISDMLGPSASGFGWNEQLKCV 420

Query: 421 QAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDE 480
            A++ V+D WVKSH  AKGLL+KPFP+Y++LA V+GKDRA+G      +E  D    +  
Sbjct: 421 VADKIVFDEWVKSHPTAKGLLHKPFPYYDELAIVYGKDRATGDGAMGFSETLDEIAEEIN 461

Query: 481 GDQNVQAEQDCYVPTPP--DINLAADMDFEDVPITPTSRPSTAGSS 509
              N     D + P  P  ++N  A M+   +P + T+R +   S+
Sbjct: 481 NGWN-----DDFDPFDPLDEMNANASMN-SSIPSSQTTRKAKRKSN 461

BLAST of Lcy06g012980 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 575.9 bits (1483), Expect = 3.5e-160
Identity = 296/526 (56.27%), Postives = 363/526 (69.01%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRR FAILC LLR  +GL  TEIVDVEEMVAMFLH++AHDVKNRVI+++F RSGETVSR
Sbjct: 15  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHVLAHDVKNRVIQQEFVRSGETVSR 74

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L  VLRLY+ L+K+P P+ ++C D RWK FENCLGALDGTY+ V+V A DRP +R
Sbjct: 75  HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 134

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
           TRKGEIATNVLGV   KG+F++V+ GWEGSAADSR+LRDAIS+ NGL VPK         
Sbjct: 135 TRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRDAISQENGLQVPKGYYYLCDAG 194

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
               EGFLAPY+G+RYHL EWRG  N PT  +E+FNMKHSSARNVIERAFG LKGRW IL
Sbjct: 195 YPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTIL 254

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREMGLDVGLDEGDVGRSE-PVPLDGENITFIQSS 300
           RGKSYYP + QCR I  C LLHNLI REM     +++ D G S        E+I +I+++
Sbjct: 255 RGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETT 314

Query: 301 TEWTQKRDDLANRMF-NTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFR 360
            EW+Q RDDLA  MF +    GG+                   +ELV  GGW+ DNGTFR
Sbjct: 315 NEWSQWRDDLATSMFTDWQFRGGD----------------SCGMELVSMGGWKSDNGTFR 374

Query: 361 AGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCI 420
            GYLA+L RM+ +K+  C + +T+VIDC++++LKR + AI+EMLGP CSGFGWNDE KCI
Sbjct: 375 PGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCI 434

Query: 421 QAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGD-- 480
            AE+E++D WV+S  AAKGLLN PFP+Y++L +VFG+DRA+G      A+   +  G   
Sbjct: 435 VAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGY 494

Query: 481 ---DEGDQNVQAEQDCYVPTPPDINLAADMDFEDVPITPTSRPSTA 506
              D GD N           PP  +   D+  +DV     SRPS A
Sbjct: 495 DRFDMGDGNED--------FPPVYSRGVDILQDDV---RASRPSRA 513

BLAST of Lcy06g012980 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 573.5 bits (1477), Expect = 1.7e-159
Identity = 292/507 (57.59%), Postives = 361/507 (71.20%), Query Frame = 0

Query: 15  TTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSRHFNATLSVVLRLYD 74
           T +GL  TE+VDVEEMVAMFLHI+AHDVK+RVI+R+F RSGET+SRHFN  L  V+RL++
Sbjct: 57  TIAGLTSTEVVDVEEMVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHE 116

Query: 75  VLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYRTRKGEIATNVLGVV 134
            LLKKP+P+   C D RW+WFENCLGALDGTY+ V+V A+DR RYRTRKGE+ATNVLGV 
Sbjct: 117 ELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVC 176

Query: 135 SPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK-------------EGFLAPYRGE 194
             KG+F++V+ GWEGSAADSR+LRDA+SRPN L VPK             EGFLAPYRG+
Sbjct: 177 DTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQ 236

Query: 195 RYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRI 254
           RYHL EWRG  N P+T +EFFNMKH SARNVIERAFG LKGRWAILRGKSYYP   QCR 
Sbjct: 237 RYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRT 296

Query: 255 ITVCCLLHNLITREM---GLDVGLDEGDVGRSEPVPLDGENITFIQSSTEWTQKRDDLAN 314
           I  CCLLHNLI REM    ++  +DE D   S       ++I +I++S EW+Q RD+LA 
Sbjct: 297 ILACCLLHNLINREMTNFDIEDNIDEVD---STHATTAADDIHYIETSNEWSQWRDNLAE 356

Query: 315 RMFNTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRAGYLARLKRMIKD 374
                +M    +  KH WT++EEA LVE LVELV+ GGWR DNGTFR GYL +L RM+  
Sbjct: 357 E----IMTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAF 416

Query: 375 KMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQAEREVYDAWVKS 434
           K+P   I + S ID +++ +KR + A++EM GP CSGFGWNDE KCI AE+EV+D W  S
Sbjct: 417 KIPGSNIHA-STIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDW--S 476

Query: 435 HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAE-QADSTHGDDEGDQNVQAEQDCY 494
           H AAKGLLNK F HY++L++VFGKDRA+GG     A+  ++   G D G  +   + D  
Sbjct: 477 HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAGAADAMPDTDFP 536

Query: 495 VPTPPDINLAADMDFEDVPITPTSRPS 504
               P +N++ D    D+  T T+R S
Sbjct: 537 PMYSPGLNMSPD----DLMETRTARVS 549

BLAST of Lcy06g012980 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 560.1 bits (1442), Expect = 2.0e-155
Identity = 293/518 (56.56%), Postives = 351/518 (67.76%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRRCFAILC LLRT +GL  TE+VDVEEMVAMFLHI+AHDVKNRVI+R+F RSGET+SR
Sbjct: 67  MDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRSGETISR 126

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L  V+RL+D LLKKP+P+   C D RW+WFENCLGALDGTY+ V+V A+DR RYR
Sbjct: 127 HFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYR 186

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
           TRKGE+ATNVLGV   KG+F++V+ GWEGSAADSR+LRDA+SRPN L VPK         
Sbjct: 187 TRKGEVATNVLGVYDTKGDFVYVLTGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDAG 246

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
               EGFLAPYRG+RYHL EWRG  N P+T +EFFNMKHSSARNVIERAFG LKGRWAIL
Sbjct: 247 YPNAEGFLAPYRGQRYHLQEWRGPKNAPSTSKEFFNMKHSSARNVIERAFGVLKGRWAIL 306

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREM-GLDVGLDEGDVGRSEPVPLDGENITFIQSS 300
           RGKSY+P   QC  I  CCLLHNLI REM   D+                 +NI  + SS
Sbjct: 307 RGKSYHPVEVQCHTILACCLLHNLINREMTNFDI----------------EDNIVSMTSS 366

Query: 301 TEWTQKRDDLANRMFNTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRA 360
           +                      +  KH WT++EEA     LVELV+ GGWR DNGTFR 
Sbjct: 367 S----------------------RLPKHTWTKEEEA----GLVELVNAGGWRSDNGTFRP 426

Query: 361 GYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQ 420
           GYL +L RM+  K+P C I + S ID +++ +KR + A++EM GP CSGFGWNDE KCI 
Sbjct: 427 GYLNQLARMMAFKIPGCNIHA-STIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIV 486

Query: 421 AEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEG 480
           AE+EV+D W  SH AAKGLLNK F HY++L++VFGKDRA+GG        AD    +  G
Sbjct: 487 AEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE---SFADIGSNNPPG 536

Query: 481 DQNVQAEQDCYVPTPPDINLAADMDFEDVPITPTSRPS 504
                A+        P  +L  +M  +D+  T T+R S
Sbjct: 547 YDAFAADAVPDTDFSPMYSLGLNMSPDDLMETRTARVS 536

BLAST of Lcy06g012980 vs. NCBI nr
Match: KAA0036474.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 515.8 bits (1327), Expect = 4.3e-142
Identity = 257/431 (59.63%), Postives = 313/431 (72.62%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRR FAILC LLR  +GL  TEIVDVEEMVAMFLHI AHDVKNRVI+R+F RSGETVSR
Sbjct: 40  MDRRTFAILCHLLRNVAGLSSTEIVDVEEMVAMFLHIFAHDVKNRVIQREFVRSGETVSR 99

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L  VLRLY+ L+K+P P+ ++C D RWK FENCLGALDGTY+ V+V A DRP +R
Sbjct: 100 HFNIVLLAVLRLYEELIKRPVPVTSNCNDQRWKCFENCLGALDGTYIKVNVPAGDRPTFR 159

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
           TRKGEIATNVLGV   KG+F++V+ GW+GSAADSR+LRDAISR NGL VPK         
Sbjct: 160 TRKGEIATNVLGVCDTKGDFVYVLAGWKGSAADSRILRDAISRENGLQVPKGYYYLCDAG 219

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
               EGFLAPYRG+RYHL EWRG  N PT  +E+FNMKHSSARNVIERAFG LKGRWAIL
Sbjct: 220 YPNAEGFLAPYRGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWAIL 279

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREMGLDVGLDEGDVGRSEPVPLDGENITFIQSST 300
           RGKS          +T C             D   DE +   +       E+I +I+++ 
Sbjct: 280 RGKSE---------MTYC-------------DDVEDEDEGDSTYATTTASEDIQYIETTN 339

Query: 301 EWTQKRDDLANRMF-NTLMAGGEKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRA 360
           EW+Q RDDLA  MF +  M+   +  +H+WTR+EE  LVE L+ELV  GGW+ DNGTFR+
Sbjct: 340 EWSQWRDDLAASMFIDWHMSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRS 399

Query: 361 GYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDEFKCIQ 417
           GYLA+L RM+ +K+  C + +T+VIDC++++LKR + AI+EM GP CSGFGWNDE KCI 
Sbjct: 400 GYLAQLVRMMAEKL-RCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIV 447

BLAST of Lcy06g012980 vs. NCBI nr
Match: KAA0062747.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 503.1 bits (1294), Expect = 2.9e-138
Identity = 270/510 (52.94%), Postives = 326/510 (63.92%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MDRRCFAILC LLRTT+GLV TE++DVEEMVAMFLHI+AH VKNR+I+R+F RSGETVSR
Sbjct: 1   MDRRCFAILCHLLRTTAGLVETEVIDVEEMVAMFLHILAHVVKNRMIQREFVRSGETVSR 60

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFE---NCLGALDGTYM-VHVSAADRP 120
           HFN  L    RL+D LLKKP+P+  SC D RWKWFE   NCL + +GTY+ V+VSA DRP
Sbjct: 61  HFNIVLLAGFRLHDELLKKPQPVTNSCTDPRWKWFEVNTNCLDS-NGTYIKVNVSATDRP 120

Query: 121 RYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK------ 180
           RYRTRKGE+ATNVLG    KG+F+FV+ GWEGSAADSR+LRDAISR NGL VPK      
Sbjct: 121 RYRTRKGEVATNVLGACDTKGDFVFVLFGWEGSAADSRILRDAISRHNGLKVPKGYYYLC 180

Query: 181 -------EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRW 240
                  EGFLAPYRGERYHL+EWRG  N PTT REFFNMKHSS+RNVIERAFG LKG W
Sbjct: 181 DAGYPNAEGFLAPYRGERYHLSEWRGESNAPTTTREFFNMKHSSSRNVIERAFGLLKGCW 240

Query: 241 AILRGKSYYPARTQCRIITVCCLLHNLITREMGLDVGLDEGDVGRSEPVPLDGENITFIQ 300
           AILRGKSYYP   QCR I  CCLLHNLI REM     +D+ D G S      G+ I +I+
Sbjct: 241 AILRGKSYYPVDVQCRTIMACCLLHNLINREMTNSEIIDDLDEGDSTYATTGGDEINYIE 300

Query: 301 SSTEWTQKRDDLANRMFNTLMAGGEKQQKH---IWTRQEEARLVESLVELVHEGGWRGDN 360
           +S EW++ RD LA+ MF+      +   +H      ++++  L+ +     H     GD 
Sbjct: 301 ASNEWSEWRDQLAHTMFSDWELQWQVCHEHRNIHGLKRKKQNLLSAWWNWFH----LGDG 360

Query: 361 GTFRAGYLARLKRMIKDKMPTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFGWNDE 420
           G     +                                      EM GP CSGFGWN+E
Sbjct: 361 GPIMGHFNL------------------------------------EMRGPSCSGFGWNEE 420

Query: 421 FKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGG--------ACNVP 480
           F+CI AER+++D+WVKSH A KGLL+K FP+Y+DL++VFGKDRA+G           NVP
Sbjct: 421 FQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVP 469

Query: 481 AEQADSTHGDDEGDQNVQAEQDCYVPTPPD 483
               D+    D  D+++       V   PD
Sbjct: 481 NMFNDTIPLGDSHDEDIPTMYSQGVHISPD 469

BLAST of Lcy06g012980 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 156.0 bits (393), Expect = 8.1e-38
Identity = 99/329 (30.09%), Postives = 156/329 (47.42%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIVAHDVKNRVIRRQFARSGETVSR 60
           MD+  F  LC LL+T   L  T  + +E  +A+FL I+ H+++ R ++  F  SGET+SR
Sbjct: 48  MDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETISR 107

Query: 61  HFNATLSVVLRLYDVLLKKPEPIMTSCQDGRWKWFENCLGALDGTYM-VHVSAADRPRYR 120
           HFN  L+ V+ +     +      T   D    +F++C+G +D  ++ V V   ++  +R
Sbjct: 108 HFNNVLNAVIAISKDFFQPNSNSDTLENDD--PYFKDCVGVVDSFHIPVMVGVDEQGPFR 167

Query: 121 TRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAISRPNGLIVPK--------- 180
              G +  NVL   S    F +V+ GWEGSA+D +VL  A++R N L VP+         
Sbjct: 168 NGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNK 227

Query: 181 ----EGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRWAIL 240
                GF+APY G            N     +E FN +H      I R FGALK R+ IL
Sbjct: 228 YPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLHRAIHRTFGALKERFPIL 287

Query: 241 RGKSYYPARTQCRIITVCCLLHNLITREMGLDVGL------DEGDVGRSEPVPLDGENIT 300
                YP +TQ +++   C LHN +  E   D+           + G    V L+ E + 
Sbjct: 288 LSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETLAEAGEDREVALEEEQVE 347

Query: 301 FI--------QSSTEWTQKRDDLANRMFN 302
            +        +   +  + RD++A+ ++N
Sbjct: 348 IVGQEHGFRPEEVEDSLRLRDEIASELWN 365

BLAST of Lcy06g012980 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-25
Identity = 62/142 (43.66%), Postives = 82/142 (57.75%), Query Frame = 0

Query: 139 FIFVMPGWEGSAADSRVLRDAISR---PNGLIVPKEGFLAPYRGERYHLTEWRGGGNPPT 198
           FI+V+ GWEGSA DSRVL DA+ +    +     +  FLAP+RG RYHL E+ G    P 
Sbjct: 25  FIYVLSGWEGSAHDSRVLSDALRKFYLVDCGFANRLNFLAPFRGVRYHLQEFAGQRRDPE 84

Query: 199 TPREFFNMKHSSARNVIERAFGALKGRWAILRGKSYYPARTQCRIITVCCLLHNLITREM 258
           TP E FN++H S RNVIER FG  K R+AI +    +  + Q  ++  C  LHN + +E 
Sbjct: 85  TPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFLRKEC 144

Query: 259 GLD-------VGLDEGDVGRSE 271
             D       VG +EGDV  +E
Sbjct: 145 RSDEADFPDEVG-NEGDVVNNE 165

BLAST of Lcy06g012980 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 3.7e-14
Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 92  WKWFENCLGALDGTYM-VHVSAADRPRYRTRKGEIATNVLGVVSPKGEFIFVMPGWEGSA 151
           + +F++C+GA+D T++   VS    P +R RKG+I+ N+L   +   EF++V+ GWEGSA
Sbjct: 19  YPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSA 78

Query: 152 ADSRVLRDAISR-PNGLIVPKE 172
            DS+VL DA++R  N L VP+E
Sbjct: 79  HDSKVLNDALTRNSNRLPVPEE 100

BLAST of Lcy06g012980 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 77.0 bits (188), Expect = 4.8e-14
Identity = 70/273 (25.64%), Postives = 124/273 (45.42%), Query Frame = 0

Query: 1   MDRRCFAILCSLLRTTSGLVGTEI---VDVEEMVAMFLHIVAHDVKNRVIRRQFARSGET 60
           M +  F ++C  L +      T +   + V + VA+ +  +A     R++ ++F   G  
Sbjct: 181 MSKSTFELICDELNSAVAKEDTALRNAIPVRQRVAVCIWRLATGEPLRLVSKKF---GLG 240

Query: 61  VSRHFNATLSVVLRLYDVLLKK--PEPIMTSCQDGRWKW-----FENCLGALDGTYM--- 120
           +S      L V   + DVL+ K    P   S ++ R ++       N +G++  T++   
Sbjct: 241 ISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERFESVSGIPNVVGSMYTTHIPII 300

Query: 121 ---VHVSAADRPRY--RTRKGEIATNVLGVVSPKGEFIFVMPGWEGSAADSRVLRDAI-- 180
              + V++    R+  R +K   +  +  VV+PKG F  +  GW GS  D +VL  ++  
Sbjct: 301 APKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPGSMPDDKVLEKSLLY 360

Query: 181 SRPNGLIVPKEGFLAPYRGERYHLTEW---RGGGNPPTTPREFFNMKHSSARNVIERAFG 240
            R N   + K  ++A   G  + L +W          T  +  FN K S  + V + AFG
Sbjct: 361 QRANNGGLLKGMWVA--GGPGHPLLDWVLVPYTQQNLTWTQHAFNEKMSEVQGVAKEAFG 420

Query: 241 ALKGRWAILRGKSYYPARTQCRIITVCCLLHNL 251
            LKGRWA L+ ++    +    ++  CC+LHN+
Sbjct: 421 RLKGRWACLQKRTEVKLQDLPTVLGACCVLHNI 448

BLAST of Lcy06g012980 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 7.9e-09
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0

Query: 164 NGLIVPKEGFLAPYRGERYHLTEWRGGGNPPTTPREFFNMKHSSARNVIERAFGALKGRW 223
           N +     G+L P+R   YHL ++ G G PP T +E FN KH   R+VI+R FG  K +W
Sbjct: 99  NSVYPTTTGYLGPHRRILYHLGQF-GRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKW 158

Query: 224 AIL 227
            IL
Sbjct: 159 RIL 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M2U34.7e-1431.87Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1[more]
Q94K493.3e-1226.69Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=... [more]
Match NameE-valueIdentityDescription
E5GBB21.7e-16056.27Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
E5GCB58.5e-16057.59Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A5A7SWD89.7e-15656.56Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SYW12.1e-14259.63Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A803QNC58.2e-13950.57Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ADN33754.13.5e-16056.27retrotransposon protein [Cucumis melo subsp. melo][more]
ADN34114.11.7e-15957.59retrotransposon protein [Cucumis melo subsp. melo][more]
KAA0034843.12.0e-15556.56retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0036474.14.3e-14259.63retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0062747.12.9e-13852.94retrotransposon protein [Cucumis melo var. makuwa] >TYK22546.1 retrotransposon p... [more]
Match NameE-valueIdentityDescription
AT5G41980.18.1e-3830.09CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G35695.12.7e-2543.66CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G28950.13.7e-1445.12unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G12010.14.8e-1425.64unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ... [more]
AT4G10890.17.9e-0944.44unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 112..249
e-value: 6.7E-19
score: 68.1
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 315..413
e-value: 2.2E-6
score: 28.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..508
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 1..313
NoneNo IPR availablePANTHERPTHR22930:SF201NUCLEASE HARBI1-LIKE PROTEINcoord: 1..313

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g012980.1Lcy06g012980.1mRNA