Lcy06g012860 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g012860
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	S-protein homolog
Location	Chr06: 17509659 .. 17510034 (+)
RNA-Seq Expression	Lcy06g012860
Synteny	Lcy06g012860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

atgatgggtaagccatcttcagcaggttcaaaaactatgaagccgttgacttcatggaaggtggtgatttataatgaattgagtccaggcttcagcttatccgttcattgcaaatcaaaaaatgacgatttgggtgaccatttgctacccgtgggtcaaaatttctcttggaagttcaaagaagatttattttcaaccactcgtttttggtgtactctaagaacctcatcaaacaaacaggtgataatggacgtattttggccagagaaacacgattggctttcttctagatgcggccatgggttttgcatttgggttgctcaagatgatggcatttatttgctgaatattcctaaaaattcaatggagtttgtgc

mRNA sequence

atgatgggtaagccatcttcagcaggttcaaaaactatgaagccgttgacttcatggaaggtggtgatttataatgaattgagtccaggcttcagcttatccgttcattgcaaatcaaaaaatgacgatttgggtgaccatttgctacccgtgggtcaaaatttctcttggaagttcaaagaagatttattttcaaccactcgtttttggtgtactctaagaacctcatcaaacaaacaggtgataatggacgtattttggccagagaaacacgattggctttcttctagatgcggccatgggttttgcatttgggttgctcaagatgatggcatttatttgctgaatattcctaaaaattcaatggagtttgtgc

Coding sequence (CDS)

atgatgggtaagccatcttcagcaggttcaaaaactatgaagccgttgacttcatggaaggtggtgatttataatgaattgagtccaggcttcagcttatccgttcattgcaaatcaaaaaatgacgatttgggtgaccatttgctacccgtgggtcaaaatttctcttggaagttcaaagaagatttattttcaaccactcgtttttggtgtactctaagaacctcatcaaacaaacaggtgataatggacgtattttggccagagaaacacgattggctttcttctagatgcggccatgggttttgcatttgggttgctcaagatgatggcatttatttgctgaatattcctaaaaattcaatggagtttgtgc

Protein sequence

MMGKPSSAGSKTMKPLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRTSSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLNIPKNSMEFV

Homology

[Close]

BLAST of Lcy06g012860 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.0e-18
Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 16  LTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRT 75
           ++ W+V + N L+ G +L +HCKSK DDLG+  L     FSW F E++  +T FWC +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYM-N 97

Query: 76  SSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLN 117
             N  + ++VFW +    L  RCG   CIW A+ DG+YL N
Sbjct: 98  KDNGHMNVNVFWDDV--ILFHRCGWKNCIWTAKTDGLYLWN 135

[Close]

BLAST of Lcy06g012860 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-16
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 16  LTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRT 75
           ++ W+V + N L+ G +L +HCKSK +DLGD  L     FSW F E++  +T FWC + +
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYM-S 97

Query: 76  SSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLN 117
             +  + + VFW +    L  RC    C+W A++DG+YL N
Sbjct: 98  KDDGHMNVKVFWDDV--ILFHRCDWKNCVWTAKNDGLYLWN 135

[Close]

BLAST of Lcy06g012860 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 4.1e-12
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 15  PLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLR 74
           PLT  +VVIYN+    + L VHCKS++DD G H+L  G  + W F  +  ++T ++C   
Sbjct: 30  PLT--RVVIYND--NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFS 89

Query: 75  TSSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIY-LLNIPKNSMEF 125
               K+ + D++   +    SSRC +  C W A++DGIY    IPK +  F
Sbjct: 90  QEQVKKGVFDIYKAVRD---SSRCRN--CTWEAKEDGIYGYGEIPKKNPLF 131

[Close]

BLAST of Lcy06g012860 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 31/94 (32.98%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 20  KVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRTSSNK 79
           +V I N    G S+ +HC+SK++DL +  +  G + S+ F+ED F TT F+C L+     
Sbjct: 25  EVRIMNRRGNGRSIGIHCRSKDNDLQNQTVTSGHDMSFSFREDFFHTTHFYCDLQWDKET 84

Query: 80  QVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIY 114
           +     +  ++ D    RC    C+W   DDG+Y
Sbjct: 85  KFGFYSYQAKRDD--DGRCS-SQCLWKIMDDGLY 115

[Close]

BLAST of Lcy06g012860 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-10
Identity = 31/94 (32.98%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 20  KVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRTSSNK 79
           +V I N+    + L +HCKS++DDLG H+L  G+ F WKF  +   +T ++C       K
Sbjct: 47  RVTIQND--NDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMK 106

Query: 80  QVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIY 114
           + + +++   +  +   RC +  C W A+ DGIY
Sbjct: 107 KGVFEIYRANRDFY---RCAN--CTWKAEKDGIY 133

[Close]

BLAST of Lcy06g012860 vs. ExPASy TrEMBL
Match: A0A5A7UB41 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008560 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MMGKPSSAGSKTMKPLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFK 60
           MMG+    GSKTM P +SWKVV++N+LSPG SL+VHCKSK++DLG+H L VG+ FSWKFK
Sbjct: 21  MMGESCLGGSKTMPPFSSWKVVVFNQLSPGQSLTVHCKSKDNDLGEHSLRVGEKFSWKFK 80

Query: 61  EDLFSTTRFWCTLRTSSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLNIPKN 120
           E+LFSTTRFWC+L +SS K V MDVFWPE+HDWL+ RC +  CIWVAQDDGIY++N+  N
Sbjct: 81  ENLFSTTRFWCSLTSSSKKTVTMDVFWPERHDWLAYRCNYATCIWVAQDDGIYIVNVSTN 140

Query: 121 SMEFV 126
             EFV
Sbjct: 141 LREFV 145

[Close]

BLAST of Lcy06g012860 vs. ExPASy TrEMBL
Match: A0A6J1ESA0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.5e-28
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 15  PLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLR 74
           P  SW+VVI N+ S    L+VHCKS +DDLG H++ V  ++ WKFK +L+ +TRFWCT  
Sbjct: 21  PFGSWRVVIINDQSKA-QLNVHCKSGDDDLGAHIIKVADDYDWKFKVNLWGSTRFWCTF- 80

Query: 75  TSSNKQVIMDVFWPE-KHDWLSSRCGHGFCIWVAQDDGIYLLNIPKNSMEFV 126
            S N  +  DVFWPE    WL  RCG+G CIWVA+D+GIYL N P+N+ E +
Sbjct: 81  DSQNGHLSFDVFWPEGDSTWLLERCGYGSCIWVAKDEGIYLKNDPRNTFELI 130

[Close]

BLAST of Lcy06g012860 vs. ExPASy TrEMBL
Match: A0A5N6QHU0 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002530 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 62/129 (48.06%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 2   MGKPSSAGSKTMK----PLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSW 61
           MG  SS+  +T+K    PL  W V +YN +  G  L +HCKSK+DDLG   L VGQ+ SW
Sbjct: 17  MGMGSSSSEETIKNIGFPLRKWHVHVYNGMGVG-KLFLHCKSKDDDLGSQTLEVGQDLSW 76

Query: 62  KFKEDLFSTTRFWCTLRTSSNKQVIMDVFWPE-KHDWLSSRCGHGFCIWVAQDDGIYLLN 121
            FKE+   TT +WC ++        +DVFW E K+ WLS RC    CIW+A+DDGIYL  
Sbjct: 77  SFKENFLGTTLYWCYMQKDDKSHATLDVFWMERKNKWLSYRCNWKNCIWIAKDDGIYLRV 136

Query: 122 IPKNSMEFV 126
           IP+N  +FV
Sbjct: 137 IPENRDDFV 144

[Close]

BLAST of Lcy06g012860 vs. ExPASy TrEMBL
Match: A0A6P4ABD6 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.7e-27
Identity = 58/120 (48.33%), Postives = 75/120 (62.50%), Query Frame = 0


Query: 7   SAGSKTMKPLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFST 66
           SA   T  PL  + + I N LS G  L +HC+SK+DDLG+H L  G +F+W F+ + + T
Sbjct: 28  SARVDTGLPLYKYNMFIVNGLSSGRDLFIHCQSKDDDLGEHNLTTGSHFTWTFRTNFWGT 87

Query: 67  TRFWCTLRTSSNKQVIMDVFWPEK-HDWLSSRCGHGFCIWVAQDDGIYLLNIPKNSMEFV 126
           TRFWC  R   N+    DVFWPEK H WL +RC +  CIW A+DDG YL N+P N  E +
Sbjct: 88  TRFWCYAR-RDNEHAAFDVFWPEKRHKWLETRCDYKVCIWTAKDDGFYLRNVPINQDELI 146

[Close]

BLAST of Lcy06g012860 vs. ExPASy TrEMBL
Match: A0A6J1DEX4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.0e-25
Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = 0


Query: 15  PLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLR 74
           P+ +W V I NELS G  L VHCKSK+DDLG+H L  G  + + FK++++ TT FWC LR
Sbjct: 30  PMPTWTVDIVNELSNGQELFVHCKSKDDDLGEHNLDSGAQYGFTFKDNVWQTTLFWCYLR 89

Query: 75  TSSNKQVIMDVFWPE--KHDWLSSRCGHGFCIWVAQDDGIYLLNIPKNSMEFV 126
              N     DV+W +  K  WL +RC +  CIW+A+ DGIY+ NIP N  E V
Sbjct: 90  KPDNSHAAFDVYWYDISKGHWLYTRCDYKNCIWIAKADGIYIKNIPSNQDELV 142

[Close]

BLAST of Lcy06g012860 vs. NCBI nr
Match: KAA0052584.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK13240.1 pumilio-like protein 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.9e-47
Identity = 84/125 (67.20%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 1   MMGKPSSAGSKTMKPLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFK 60
           MMG+    GSKTM P +SWKVV++N+LSPG SL+VHCKSK++DLG+H L VG+ FSWKFK
Sbjct: 21  MMGESCLGGSKTMPPFSSWKVVVFNQLSPGQSLTVHCKSKDNDLGEHSLRVGEKFSWKFK 80

Query: 61  EDLFSTTRFWCTLRTSSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLNIPKN 120
           E+LFSTTRFWC+L +SS K V MDVFWPE+HDWL+ RC +  CIWVAQDDGIY++N+  N
Sbjct: 81  ENLFSTTRFWCSLTSSSKKTVTMDVFWPERHDWLAYRCNYATCIWVAQDDGIYIVNVSTN 140

Query: 121 SMEFV 126
             EFV
Sbjct: 141 LREFV 145

[Close]

BLAST of Lcy06g012860 vs. NCBI nr
Match: KAE8647731.1 (hypothetical protein Csa_003821 [Cucumis sativus])

HSP 1 Score: 194.1 bits (492), Expect = 7.1e-46
Identity = 86/125 (68.80%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 1   MMGKPSSAGSKTMKPLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFK 60
           MMG+P   GSKTM PL+ WKVVI+++L+PG +L VHCKSK++DLG+H L V QNFSWKFK
Sbjct: 44  MMGEPCWGGSKTMAPLSRWKVVIFSQLNPGENLLVHCKSKDNDLGEHSLQVSQNFSWKFK 103

Query: 61  EDLFSTTRFWCTLRTSSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLNIPKN 120
           E+LFSTT FWCTL TSS K+V MDVFWPE+H+WL+ RC +  CIWVAQDDGIYL+N  KN
Sbjct: 104 ENLFSTTLFWCTLTTSSKKKVTMDVFWPERHNWLAIRCSYRTCIWVAQDDGIYLVN--KN 163

Query: 121 SMEFV 126
           + EFV
Sbjct: 164 AREFV 166

[Close]

BLAST of Lcy06g012860 vs. NCBI nr
Match: KAG7034676.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194.1 bits (492), Expect = 7.1e-46
Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 1   MMGKPSSAGSKTMKPLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFK 60
           MMG P SAGSKTM PL+ WKVVI+N+L+PG +L  HCKSK DDLGDHLL VG+ +SW+FK
Sbjct: 3   MMGNPVSAGSKTMPPLSRWKVVIFNQLNPGQTLLAHCKSKEDDLGDHLLQVGEQYSWEFK 62

Query: 61  EDLFSTTRFWCTLRTSSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLNIPKN 120
           E++ STTRFWCT  TS NK+++MDVFWPE H WL+ RC    C+WVAQDDG+YL NIP+ 
Sbjct: 63  ENVISTTRFWCTFTTSLNKRIVMDVFWPETHPWLAYRCNDYSCVWVAQDDGMYLTNIPEG 122

Query: 121 SME 124
             E
Sbjct: 123 KRE 125

[Close]

BLAST of Lcy06g012860 vs. NCBI nr
Match: KAE8648119.1 (hypothetical protein Csa_004728 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 8.7e-28
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 7   SAGSKTMKPLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFST 66
           S  SK    L+ W VVI N+LS    L VHCKSK+D+LGDH++  GQ++ WKF+E+ F T
Sbjct: 29  SIDSKYAPALSKWTVVILNKLSSNQQLFVHCKSKDDNLGDHVVEAGQSYEWKFRENAFQT 88

Query: 67  TRFWCTLRTSSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLNIPKNSME 124
           T FWCTLRT +N     +V+W EK +WL SRC    C+W A+DDG   +     SM+
Sbjct: 89  TLFWCTLRTPTNLHQTFEVYWREKGEWLRSRCNFKICMWYARDDGSITIQCSAFSMD 145

[Close]

BLAST of Lcy06g012860 vs. NCBI nr
Match: XP_022931007.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 15  PLTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLR 74
           P  SW+VVI N+ S    L+VHCKS +DDLG H++ V  ++ WKFK +L+ +TRFWCT  
Sbjct: 21  PFGSWRVVIINDQSKA-QLNVHCKSGDDDLGAHIIKVADDYDWKFKVNLWGSTRFWCTF- 80

Query: 75  TSSNKQVIMDVFWPE-KHDWLSSRCGHGFCIWVAQDDGIYLLNIPKNSMEFV 126
            S N  +  DVFWPE    WL  RCG+G CIWVA+D+GIYL N P+N+ E +
Sbjct: 81  DSQNGHLSFDVFWPEGDSTWLLERCGYGSCIWVAKDEGIYLKNDPRNTFELI 130

[Close]

BLAST of Lcy06g012860 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 92.0 bits (227), Expect = 3.5e-19
Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 16  LTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRT 75
           ++ W+V + N L+ G +L +HCKSK DDLG+  L     FSW F E++  +T FWC +  
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYM-N 97

Query: 76  SSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLN 117
             N  + ++VFW +    L  RCG   CIW A+ DG+YL N
Sbjct: 98  KDNGHMNVNVFWDDV--ILFHRCGWKNCIWTAKTDGLYLWN 135

[Close]

BLAST of Lcy06g012860 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 16  LTSWKVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRT 75
           ++ W+V + N L+ G +L +HCKSK +DLGD  L     FSW F E++  +T FWC + +
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYM-S 97

Query: 76  SSNKQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLN 117
             +  + + VFW +    L  RC    C+W A++DG+YL N
Sbjct: 98  KDDGHMNVKVFWDDV--ILFHRCDWKNCVWTAKNDGLYLWN 135

[Close]

BLAST of Lcy06g012860 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-14
Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 20  KVVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRTSSNK 79
           KVV+ N+L     L VHC+SK+DDLG+H+L +GQ++ + F ++++ TT F C +    N 
Sbjct: 28  KVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNF 87

Query: 80  QVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIY 114
           +  +D F   +  W  S+     C W+ ++DGIY
Sbjct: 88  KHHLD-FVAYETSW--SKALEASCKWIGREDGIY 118

[Close]

BLAST of Lcy06g012860 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-11
Identity = 38/104 (36.54%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 21  VVIYNELSPGFSLSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRTSSNKQ 80
           VVIYN+L     L  HCKSKNDDLGD  + V   +S++F+  +F  T F+C      +K+
Sbjct: 30  VVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF--IWDKE 89

Query: 81  VIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIYLLNIPKNSMEF 125
           +     + +  D   +  G   C W  + DG   LN  KNS  F
Sbjct: 90  LHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN--KNSNMF 129

[Close]

BLAST of Lcy06g012860 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-11
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 21  VVIYNELSPGFS--LSVHCKSKNDDLGDHLLPVGQNFSWKFKEDLFSTTRFWCTLRTSSN 80
           + + NEL+P     L VHCKSKN+D+G   L +G+  S+ FK + + TT FWC L    +
Sbjct: 26  ITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPD 85

Query: 81  KQVIMDVFWPEKHDWLSSRCGHGFCIWVAQDDGIY 114
            +    +    +   L ++ G  +  W+A+DDGIY
Sbjct: 86  YKRYRGI-TAYQAIGLFAKDGSSY-NWLARDDGIY 118

The following BLAST results are available for this feature:

BLAST of Lcy06g012860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	5.0e-18	41.58	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	2.7e-16	38.61	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F2Q9V4	4.1e-12	36.94	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q40975	1.7e-10	32.98	Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1	[more]
P0DN92	2.9e-10	32.98	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of Lcy06g012860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UB41	1.4e-47	67.20	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00...	[more]
A0A6J1ESA0	5.5e-28	52.68	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1	[more]
A0A5N6QHU0	2.1e-27	48.06	S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002530 PE=3 SV=1	[more]
A0A6P4ABD6	4.7e-27	48.33	S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1	[more]
A0A6J1DEX4	2.0e-25	48.67	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111020182 PE=3 SV=1	[more]

BLAST of Lcy06g012860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052584.1	2.9e-47	67.20	pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK13240.1 pumilio-like...	[more]
KAE8647731.1	7.1e-46	68.80	hypothetical protein Csa_003821 [Cucumis sativus]	[more]
KAG7034676.1	7.1e-46	65.85	S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAE8648119.1	8.7e-28	48.72	hypothetical protein Csa_004728 [Cucumis sativus]	[more]
XP_022931007.1	1.1e-27	52.68	S-protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of Lcy06g012860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.5e-19	41.58	S-protein homologue 1	[more]
AT4G29035.1	1.9e-17	38.61	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.0e-14	37.23	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	6.0e-11	36.54	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	6.0e-11	35.79	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 20..123 e-value: 2.3E-28 score: 98.8
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 14..114
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 14..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g012860.1	Lcy06g012860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region