Lcy06g012290 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g012290
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	X8 domain-containing protein
Location	Chr06: 15714161 .. 15715803 (+)
RNA-Seq Expression	Lcy06g012290
Synteny	Lcy06g012290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGATTCAGAAGAAGACACTGAAATCACCGTGTGCTGGAAAAACAAATGTCTTCCTCTACTCGGCTCATCATTCTCCAGCTCTCTTTGCTGCTAGTTTTCACTGTCACTCTACAGAGAATAGGTAACTAATTTCTGTTTGATAACATTTTTGTTCTTATGTTTCGTGTTTTTTTTCCGTTACTTGAGCCAAAACGTGATTGATGTCAATATTTGGTTTCTCATTTTGTTATGGTATTATGGTATTATCCACTTTATATATAAGCCTTCCAGACTTTACTTTTTGGTCCTTTCAAAAGATCTCATATCGATAGAGATAGTTGTACGCTCTTTTATATACTTACAGTTACGATCTTCTTTTATCTAGTCGATGTGGGACTTTAGTCACATTTCCAACCGTTTTGAATAGAGATTAAGAATCTGTGTTTGATACTTATTTCTAGTTTTTTCTTCTTTAAAAAAAGAAGTGTAAACGAGTTTGGGGGATATTTTTTGTTTCTTGTTTATACTCATTTCTAATGTATTACTTTATTTTAAAACAAGAACACAATATACTTGGGTACACAAAGTTCAGGCTAACTTTTTTTTTTTTTTTTTTATGGGATTTCTTTTTAGCAACTTAAAACTATGAGTGAGATCCACTTATCTAGTAAATGCAATATAAATAGACTAATAAAACCAAATCATATTGAAAATTAAGTTTGGTAGAAAATTCTATTGATCAATGTGTATATAGGTAAATACCGTTAAAAAAGACTGCATGATAAGTTAGACTTTTGAAAGCTAATATTTTAAAAATAAATATCCAAAAAACAAGAAACGTTATCAAACGACGCCTTTACACATAACTATAAAGTAGAATATAATGATCCGTTATTCGTGTATAACGATAATGATGGTGAATGGAAATTGAGTGTCAGAGGGACAATTGGAGGAATGGTGCATAGCAGATGAGCAAGTTCCAGATGATGAGTTGCAAAGAGCACTTGATTGGGCTTGTGGGAAAGGAGGAGCAGATTGTAGGAATATTCAAGTGAAGCAGTCTTGTTTTTACCCAAACACTGTTAGGGATCATGCTTCATATGCCTTCAACAGTTACTACCAAAGGTTCAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTGCCCTTGACCCTAGTAAGTGCTTTACTTACGTCGATCCTCTCGTTTGATAATCATTTTTGGTTAAAGATATTCTCGTTTGTCTTTGATTTGGAGATCTGGAAAACAAATGTAGAGAAGAGAAAAGAACACTCGATGTCGTTGTCTCTAATTACTATCATCATCGCTATGTGTCTCCCTCGAGTCTATAACCTTTGGTCATCTTTTAACAATCTTTGTTTCCTATATGGCAGGCCATGGTTCATGCAAGTTTGAGTATGTACCTTGAAGAAGAGCATTGTGCTTGATCATCAAGAGGCTTCTTGATTATAATTTGAGTTCTCAACCTTTTCTATTTCCATTATTGTTCTTGTACTTGGGTGTGTGAAAGCATTTTTTCCATTTTCAATTTTGAAGTAGGCTCCAAAATCTTTTAGAATCTAAGGTTGTTAATCAATCAACTATTGAAGTTGAATTTTTCTTTTAAGATAAAATCAATCAAATTTAAC

mRNA sequence

CAGATTCAGAAGAAGACACTGAAATCACCGTGTGCTGGAAAAACAAATGTCTTCCTCTACTCGGCTCATCATTCTCCAGCTCTCTTTGCTGCTAGTTTTCACTGTCACTCTACAGAGAATAGAGGGACAATTGGAGGAATGGTGCATAGCAGATGAGCAAGTTCCAGATGATGAGTTGCAAAGAGCACTTGATTGGGCTTGTGGGAAAGGAGGAGCAGATTGTAGGAATATTCAAGTGAAGCAGTCTTGTTTTTACCCAAACACTGTTAGGGATCATGCTTCATATGCCTTCAACAGTTACTACCAAAGGTTCAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTGCCCTTGACCCTAGCCATGGTTCATGCAAGTTTGAGTATGTACCTTGAAGAAGAGCATTGTGCTTGATCATCAAGAGGCTTCTTGATTATAATTTGAGTTCTCAACCTTTTCTATTTCCATTATTGTTCTTGTACTTGGGTGTGTGAAAGCATTTTTTCCATTTTCAATTTTGAAGTAGGCTCCAAAATCTTTTAGAATCTAAGGTTGTTAATCAATCAACTATTGAAGTTGAATTTTTCTTTTAAGATAAAATCAATCAAATTTAAC

Coding sequence (CDS)

ATGTCTTCCTCTACTCGGCTCATCATTCTCCAGCTCTCTTTGCTGCTAGTTTTCACTGTCACTCTACAGAGAATAGAGGGACAATTGGAGGAATGGTGCATAGCAGATGAGCAAGTTCCAGATGATGAGTTGCAAAGAGCACTTGATTGGGCTTGTGGGAAAGGAGGAGCAGATTGTAGGAATATTCAAGTGAAGCAGTCTTGTTTTTACCCAAACACTGTTAGGGATCATGCTTCATATGCCTTCAACAGTTACTACCAAAGGTTCAAGCACAAGGGAGCCACTTGCTATTTCAATTCAGCTGCCATGGTCACTGCCCTTGACCCTAGCCATGGTTCATGCAAGTTTGAGTATGTACCTTGA

Protein sequence

MSSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP

Homology

[Close]

BLAST of Lcy06g012290 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.7e-21
Identity = 46/94 (48.94%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 27  GQLEEWCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSYY 86
           G  ++WCIA  Q    ELQ ALDWACG G  DC  +Q  Q CF P+TV  HASYAFN+YY
Sbjct: 386 GGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYY 445

Query: 87  QRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
           Q+       C FN A++    DPS+G+C +   P
Sbjct: 446 QQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAP 479

[Close]

BLAST of Lcy06g012290 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-20
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 30  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSYYQRF 89
           + +CIA + V    LQ ALDWACG G ++C  IQ  +SC+ PN V+ HAS+AFNSYYQ+ 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 90  KHKGATCYFNSAAMVTALDPSHGSCKF 117
                +C F   AM+T  DPSHGSC F
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIF 465

[Close]

BLAST of Lcy06g012290 vs. ExPASy Swiss-Prot
Match: Q94CD8 (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.3e-19
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 32  WCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSYYQRFKH 91
           +C+A     DD+L   L+WACG+G A+C  IQ  Q C+ PN V+ HAS+AFN YYQ+ K 
Sbjct: 362 FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKS 421

Query: 92  KGATCYFNSAAMVTALDPSHGSCKF 117
            G TC F+  A+ T  DPS+ +C +
Sbjct: 422 AGGTCDFDGTAITTTRDPSYRTCAY 446

[Close]

BLAST of Lcy06g012290 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 9.6e-19
Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 3   SSTRLIILQLSLLLVFTVTLQRIEG---QLEEWCIADEQVPDDELQRALDWACGKGGADC 62
           S  RL IL  +  ++  +T  +I G   Q+E WC+A     D  LQ A++WACG+GGADC
Sbjct: 9   SHLRLSILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADC 68

Query: 63  RNIQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKF 117
             IQ    C  P  V+  AS+ FN+YY +   +   C FN+ A +T+L+PS G+CK+
Sbjct: 69  GPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKY 125

[Close]

BLAST of Lcy06g012290 vs. ExPASy Swiss-Prot
Match: Q9ZU91 (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 3.1e-17
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 30  EEWCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSYYQRF 89
           + +CIA E+V    LQ ALDWACG G  DC  +   +SC+ P+ V  H++YAFN+YYQ+ 
Sbjct: 358 QTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKM 417

Query: 90  KHKGATCYFNSAAMVTALDPSHGSCKF 117
                +C F   A VT  DPS G+C F
Sbjct: 418 GKASGSCDFKGVATVTTTDPSRGTCVF 444

[Close]

BLAST of Lcy06g012290 vs. ExPASy TrEMBL
Match: A0A6J1CNC5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Momordica charantia OX=3673 GN=LOC111012685 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCR 60
           MSS  RLIILQLSLLL+F +  QR+EGQLEEWCIADEQVPDDELQRALDWACGKGGADCR
Sbjct: 1   MSSPPRLIILQLSLLLLFIIAPQRLEGQLEEWCIADEQVPDDELQRALDWACGKGGADCR 60

Query: 61  NIQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 120
            IQVKQ CFYPNTVRDHASYAFN+YYQ+FKHKGATCYFNSAAMVTALDPSHGSCKFEYVP
Sbjct: 61  KIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 120

[Close]

BLAST of Lcy06g012290 vs. ExPASy TrEMBL
Match: A0A6J1EBZ4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LOC111432636 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 102/119 (85.71%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 2   SSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRN 61
           S STRL IL LS+LL F V  +R EGQLEEWCIADEQVPDDELQRALDWACGKGGADC +
Sbjct: 3   SRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGD 62

Query: 62  IQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
           IQVK+ CFYPNTVRDHASYAFNSYYQ+FKHKGA+C+FNSAAMVTALDPSHGSCKFEYVP
Sbjct: 63  IQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 121

[Close]

BLAST of Lcy06g012290 vs. ExPASy TrEMBL
Match: A0A0A0LW57 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181450 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.2e-52
Identity = 104/123 (84.55%), Postives = 110/123 (89.43%), Query Frame = 0


Query: 1   MSSSTRLIILQLSLLLVFTVTLQRIEGQL---EEWCIADEQVPDDELQRALDWACGKGGA 60
           MSSST LIIL LS LL+F +T   I G +   EEWCIADEQVPDDELQRALDWACGKGGA
Sbjct: 1   MSSSTHLIILSLSFLLLFIIT-PTISGDVSFDEEWCIADEQVPDDELQRALDWACGKGGA 60

Query: 61  DCRNIQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFE 120
           DCRNIQ+KQ CFYPNTVRDHASYAFNSYYQ+FKHKGATCYFNSAAMVT+LDPSHGSCKFE
Sbjct: 61  DCRNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFE 120

[Close]

BLAST of Lcy06g012290 vs. ExPASy TrEMBL
Match: A0A6J1HUR1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC111466373 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.4e-51
Identity = 99/119 (83.19%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 2   SSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRN 61
           S STRL IL LS+LL F V  +R EGQ EEWCIADEQVPDDELQRALDWACGKGGA+C +
Sbjct: 3   SRSTRLTILHLSVLLAFLVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGANCGD 62

Query: 62  IQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
           IQVK+ CFYP+TVRDHASYAFNSYYQ+FKHKGA+C+FNSAAMVTALDPSHGSCKFEYVP
Sbjct: 63  IQVKRPCFYPDTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 121

[Close]

BLAST of Lcy06g012290 vs. ExPASy TrEMBL
Match: A0A1S3CJN7 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo OX=3656 GN=LOC103501716 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.3e-49
Identity = 100/122 (81.97%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 1   MSSSTRL-IILQLSLLLVFTVTLQRIEGQL-EEWCIADEQVPDDELQRALDWACGKGGAD 60
           MSSST L IIL LS LL+F +T    +  + EEWCIADEQVPDDELQRALDWACGKGGAD
Sbjct: 5   MSSSTHLIIILYLSFLLLFIITPTISDEWVDEEWCIADEQVPDDELQRALDWACGKGGAD 64

Query: 61  CRNIQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEY 120
           C NIQ+KQ CFYPNT+RDHASYAFNSYYQ+FKHKGATCYFNSAAMVT+LDPSHGSCKFEY
Sbjct: 65  CTNIQMKQPCFYPNTLRDHASYAFNSYYQKFKHKGATCYFNSAAMVTSLDPSHGSCKFEY 124

[Close]

BLAST of Lcy06g012290 vs. NCBI nr
Match: XP_022142612.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCR 60
           MSS  RLIILQLSLLL+F +  QR+EGQLEEWCIADEQVPDDELQRALDWACGKGGADCR
Sbjct: 1   MSSPPRLIILQLSLLLLFIIAPQRLEGQLEEWCIADEQVPDDELQRALDWACGKGGADCR 60

Query: 61  NIQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 120
            IQVKQ CFYPNTVRDHASYAFN+YYQ+FKHKGATCYFNSAAMVTALDPSHGSCKFEYVP
Sbjct: 61  KIQVKQPCFYPNTVRDHASYAFNTYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 120

[Close]

BLAST of Lcy06g012290 vs. NCBI nr
Match: XP_038895406.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida])

HSP 1 Score: 217.2 bits (552), Expect = 7.5e-53
Identity = 105/121 (86.78%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MSSSTRLIILQLSLLLVFTVTLQRIEGQL-EEWCIADEQVPDDELQRALDWACGKGGADC 60
           MSSST  IILQ SLLLVF +T  R E Q  +EWCIADEQVPDDELQRALDWACGKGGADC
Sbjct: 1   MSSSTWFIILQFSLLLVFIITPTRSEAQFDQEWCIADEQVPDDELQRALDWACGKGGADC 60

Query: 61  RNIQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYV 120
           RNIQ+KQ CFYPNTVRDHASYAFNSYYQ+FKHKGATCYFNSAAMVTALDPSHGSCKFE+V
Sbjct: 61  RNIQMKQPCFYPNTVRDHASYAFNSYYQKFKHKGATCYFNSAAMVTALDPSHGSCKFEFV 120

[Close]

BLAST of Lcy06g012290 vs. NCBI nr
Match: XP_022925351.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52
Identity = 102/119 (85.71%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 2   SSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRN 61
           S STRL IL LS+LL F V  +R EGQLEEWCIADEQVPDDELQRALDWACGKGGADC +
Sbjct: 3   SRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGD 62

Query: 62  IQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
           IQVK+ CFYPNTVRDHASYAFNSYYQ+FKHKGA+C+FNSAAMVTALDPSHGSCKFEYVP
Sbjct: 63  IQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 121

[Close]

BLAST of Lcy06g012290 vs. NCBI nr
Match: KAG6573531.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.2 bits (544), Expect = 6.4e-52
Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 2   SSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRN 61
           S STRL IL LS+LL F V  +R EGQ EEWCIADEQVPDDELQRALDWACGKGGADC +
Sbjct: 3   SRSTRLTILHLSVLLAFIVAPRRSEGQFEEWCIADEQVPDDELQRALDWACGKGGADCGD 62

Query: 62  IQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
           IQVK+ CFYPNTVRDHASYAFNSYYQ+FKHKGA+C+FNSAAMVTALDPSHGSCKFEYVP
Sbjct: 63  IQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALDPSHGSCKFEYVP 121

[Close]

BLAST of Lcy06g012290 vs. NCBI nr
Match: XP_023542518.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 8.3e-52
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 2   SSSTRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRN 61
           S STRL IL LS+LL F V  +R EGQLEEWCIADEQVPDDELQRALDWACGKGGADC +
Sbjct: 3   SRSTRLTILHLSVLLAFIVAPRRSEGQLEEWCIADEQVPDDELQRALDWACGKGGADCGD 62

Query: 62  IQVKQSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
           IQVK+ CFYPNTVRDHASYAFNSYYQ+FKHKGA+C+FNSAAMVTAL+PSHGSCKFEYVP
Sbjct: 63  IQVKRPCFYPNTVRDHASYAFNSYYQKFKHKGASCFFNSAAMVTALNPSHGSCKFEYVP 121

[Close]

BLAST of Lcy06g012290 vs. TAIR 10
Match: AT5G35740.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-40
Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 4   STRLIILQLSLLLVFTVTLQRIEGQLEEWCIADEQVPDDELQRALDWACGKGGADCRNIQ 63
           ST LI + L LL++     +R E + E+WCIADEQ PDDELQ ALDWACGKGGADC  +Q
Sbjct: 2   STFLIRILLPLLIIAMTLPRRSEAESEQWCIADEQTPDDELQAALDWACGKGGADCSKMQ 61

Query: 64  VK-QSCFYPNTVRDHASYAFNSYYQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
            + Q CF PNT+RDHAS+AFNSYYQ +K+KG +CYF  AAM+T LDPSHGSC++EY P
Sbjct: 62  QENQPCFLPNTIRDHASFAFNSYYQTYKNKGGSCYFKGAAMITELDPSHGSCQYEYNP 119

[Close]

BLAST of Lcy06g012290 vs. TAIR 10
Match: AT2G04910.2 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-32
Identity = 56/95 (58.95%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 26  EGQLEEWCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSY 85
           + +  +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  Q CF PNTV+DHAS  FN+Y
Sbjct: 9   KAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNNY 68

Query: 86  YQRFKHKGATCYFNSAAMVTALDPSHGSCKFEYVP 121
           YQR+K  G +C FNS A +T  DPSH SC FEYVP
Sbjct: 69  YQRYKRNGGSCNFNSTAFITQTDPSHDSCHFEYVP 103

[Close]

BLAST of Lcy06g012290 vs. TAIR 10
Match: AT2G04910.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.8e-27
Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 26  EGQLEEWCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSY 85
           + +  +WC+AD Q+PD+ +Q A+DWAC  GGADC  IQ  Q CF PNTV+DHAS  FN+Y
Sbjct: 9   KAEFGQWCVADGQIPDNVIQAAVDWACQTGGADCSTIQPNQPCFLPNTVKDHASVVFNNY 68

Query: 86  YQRFKHKGATCYFNSAAMVTALDPS 111
           YQR+K  G +C FNS A +T  DPS
Sbjct: 69  YQRYKRNGGSCNFNSTAFITQTDPS 93

[Close]

BLAST of Lcy06g012290 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 5.1e-23
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 31  EWCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSYYQRFK 90
           +WCIA        LQ ALD+ACG GGADC  IQ   +C+ PNT+RDHAS+AFNSYYQ  K
Sbjct: 147 QWCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQ--K 206

Query: 91  HKGA-TCYFNSAAMVTALDPSHGSCKF 117
           H G+ +C F  AA +T+ DPS GSC F
Sbjct: 207 HPGSDSCNFGGAAQLTSTDPSKGSCHF 231

[Close]

BLAST of Lcy06g012290 vs. TAIR 10
Match: AT4G26830.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 32  WCIADEQVPDDELQRALDWACGKGGADCRNIQVKQSCFYPNTVRDHASYAFNSYYQRFKH 91
           WC+++ +V  ++LQ ALD+ACG+GGADCR IQ   +C++P ++  HASYAFNSYYQ+   
Sbjct: 367 WCVSNGEVAKEKLQEALDYACGEGGADCRPIQPGATCYHPESLEAHASYAFNSYYQKNSR 426

Query: 92  KGATCYFNSAAMVTALDPSHGSCKF 117
           +  TC+F  AA V    P +G C+F
Sbjct: 427 RVGTCFFGGAAHVVTQPPRYGKCEF 451

The following BLAST results are available for this feature:

BLAST of Lcy06g012290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYE5	2.7e-21	48.94	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360...	[more]
O65399	1.0e-20	51.72	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q94CD8	4.3e-19	47.06	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 ...	[more]
Q9M2K6	9.6e-19	41.03	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5...	[more]
Q9ZU91	3.1e-17	45.98	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 ...	[more]

BLAST of Lcy06g012290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNC5	1.2e-56	90.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1EBZ4	1.1e-52	85.71	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0LW57	5.2e-52	84.55	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G181450 PE=4 SV=...	[more]
A0A6J1HUR1	4.4e-51	83.19	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3CJN7	9.3e-49	81.97	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of Lcy06g012290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142612.1	2.5e-56	90.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Momordica charantia]	[more]
XP_038895406.1	7.5e-53	86.78	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida]	[more]
XP_022925351.1	2.2e-52	85.71	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata]	[more]
KAG6573531.1	6.4e-52	84.87	PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023542518.1	8.3e-52	84.87	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy06g012290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35740.1	1.2e-40	64.41	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.2	1.6e-32	58.95	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G04910.1	5.8e-27	56.47	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G29380.1	5.1e-23	57.47	Carbohydrate-binding X8 domain superfamily protein	[more]
AT4G26830.1	1.9e-22	49.41	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 31..116 e-value: 1.5E-46 score: 170.6
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 32..103 e-value: 4.0E-21 score: 75.5
None	No IPR available	GENE3D	1.20.58.1040		coord: 28..118 e-value: 9.4E-11 score: 44.0
None	No IPR available	PANTHER	PTHR31044:SF75	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-LIKE	coord: 12..120
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 12..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g012290.1	Lcy06g012290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009506	plasmodesma