Lcy06g011850 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATAATAAGCCGATTTCTCCTATGGAAATCAAGTGTGAATGGATCAATGGATACTTGTCCGAGTTCAAAAGTGCAAACCAACGGAAACGAAGTAAGGAGCAATCTGAACAGGACGTCTGTCAGATGATTTCCCAAGGACAGAATTTGATTATGCATGTTGATGCAGCATGTGATTTTGAGAATCGTCGTTGTGGTATTGGTATAGTGCTCCGTAATCGGAATGGTCATTTGAAGTGTGCGAAGCAACAAGGTTTGATTACTTTTACTTCTTCGTTATGTGCTGAAGCGATGGCCATACTTGAAGGTATGAAGATAGCAATCCAAAATGGAGTGCAGCGTTTGACCATCTTTTCAGATTCTTTAGCTTTGATCTCTATTATTATGCGGAAGGAACGGTGTACACTGGAATGTGCTACAATCTTTTGGGACATTGAGAATCTTCGAGGTTCGTTTCAAGAGATCTTTCATGCAAATCGCGAGTTTAATTATTTGGCGGATGCTCTAGCCCGTACAGGGCTGTATGATTCACCACAAATGTGGTTCTCAGACTATCCCGATTGGGTAATACGTTTCGCTCATTGTGAGCAACGTTTATTTGTAACCCCTTGGGGATCTTTATCTTCTTAATATAATCCTTTTTGGTTAAAAAAAAATGACAATTCAATTAATTCTATTAATTGAATCCACATTAATTAAATATCAAATATTTAATTAAATTTACAATTGAATCATATTCAATTTTATCTCCCTCATTTAACATATAGTTTTAATGTGCATCAAAATGTACATTAATATAAACTATAGTATTAATTTGATTAAATCACATTTAACCAAATTAAATTAAATTAATTAATTCCCCAATTAATTAATTCATGAATTAATCAAATATCACATATTTAATTAAATTCATAATTCTCTTTTTAATTAATTTTGAATTGTATCCAAAATTAACTATAAAGTTTAATTCTTTAATTAAACTTTATACTATAATGTATCTCCATACATTATATTAATTTCATTTAATATCAAGACTAAATTATCTCAGAACCCGTTATGAGCTAGCAGGTGGACCTAATGAACCTATAGATCAGAAGCTCCAACGATACGAGATTGATAAGCTAAACTCATTAACCGAGTCAATCAACATTCGTTAACTGTGGGTCACTCCACTAAAGACCCTCTTCTCACTGTAGAATATTTCTGTGTCCATGGATATCGACCAATGCAGTAAGTCAATCCTTCACGTGTGTTCGTAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTAGATCCTTAAGTACCACTGATCCCTCTAATGAACAACCTGTTTAGGGCCCAACCACTAAACAGAAATTCCTCTCAGGCCAGGAGAGGACAACGTGCTTTTATTCAAGCCCCGGAATCAGCCCTTAAGGGAACACACATCTACTTGCTCCAATAGGGGAAGGAGTGAATTCCATCTTGTACTGTTATGTTTCTAGCCCCCATTCGGTCTTGCCCCTGAAATGGTAGGAATGTTGAGTCGGCGAACTGGCCACTCTCACCCATACAAATCTAAGGACAATCCCTCTTGAAAAGGAGTTCATATCAGACTCAGGATTGGGATTGAGTTACCTAGGTCATCCGATTGAAATAGAAACCTAAACTAGTCAACGACGTTACATCTAGTGGTTACTATTTTGCAGTCCGGTCTTATGCAAACTCATTGCATAGAATACCCCCACCCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATTGGATACAAGGTAGACCGTATCACATAGTGTTACCAGGATAAGGTACCCAACCTTATCCCTATACTATAGACCATTTAGGTTGTTACTTGGACACCGATCCCCGTATGTCACTACATATCAGTCCAAGTTTCATTTAAACAACCTTGGATCTTAGTTTATTGGATTTAGGGTTTATTAATGCAAACTCAATTATTCAATAACCAAATTACTGAATCACTCAAATAACGCTTTATTGAGATCGATTAATTTGTTTCATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAACTCCTACTTGAACTAAAACTCTAGTTTAATGGGATGTACAATAATCTATTCAGCAGTGGGTGTATAAATACATGTATAAAACATATACAATGTACAAATACAATAAACTAGGGCATCACTATACCCATTACATAATGGTATCACTATATCCATTACATTTCTCCCACTTGCCCTAGATTCCATCTTTGTACATAACTCGTAGACCTAGACCTTCTAAATGACTCTCATACCCTTTAGCTGAGAGAGCCTTCATGAATTAATCAACAACATTCCATTTAATTAATCAGCAATACAGTGGTGCTGTGGAAAATTCAAAAGAACCTTGCAGCCAAAGACAATTCACATTAATTAAATGGAATATTGTTGATTAATTCACGAAGGCTCTCTCAGCTAAAGGGTATGAGGGTCATCTAGAAGGTCTAGGTCTACGAGTTATGTACAAAGATGGAATCTAGGGCAAGTGGGAGAAATGAAATGGGTATAGTGATACCATTATGTAATGGGTATAGTGATGCCCTAGTTTATTGTATTTGTACATTGTATATGTTTTATACATGTATTTATACACCCACTGCTGAATAGATTATTGTACATCCCACTAAACTAGAGTTTTAATTCAAGTGGGAGTTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTATATACTTGTTTTAATAAAGTGTTATTAAGTTTCTGCAATAAAATGTTATTGTTAAATATTGCACAATTTAACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTGTATGTAACTTGAACTAGTATGTGGGGACATACGGGGATCGATGTTCAAGTAACAACCTAAAAGGTCTATAGTACAAGGATAAGACTGGGTACCTTATCTTGGTAACACTATGTGATACGACCCGCTTTGTATTTGATACAGACGTATTGATCAAAAGCGTCCATGTAGTAGACATGCGAGTGGGGGTATCCTATGCGATGAGTTTGCATACGACCGAACCGCGAAATAGTAACCACTAGCCGTAACACCGTTAACTAGTTAGGTTTCTATTTCACAAGGATGACCTAGGCAACTTAGTCTGAATCCTTAGTGGATTATGGACTCGTTCACGAGAGATTGTCCTTTGATTTGTATGGGTGATAGTGGCCAGCACACCGACTCAATAAGCCTACCATTTTGGGGACAAGACCGAGTGGGGAGCTGGGAACATAATCACACAAGATGAAATTCACTCCTTTCCGACTTTTGTGGAAGTAGATGAGTGTTCCCTTAAGTGGTGTCTCCGGGTCTTGAACAAAGGGCCCTACCCTCTCACTGGCCCAAGAGGGGTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGAAGGTAAAGGTAACTCATGGGTAAAACGGTAATTTGACCCAGCTGGAGTTACGAACACTCGTGAAGGACTGACTTGCCGTTATTGGTCGATATCCATGGACACAGAAATATTCTACAGTGAGAAGAGTTCAGCTGTGGGTCTTCCTTATTTCCTCCAAGTTGAAGGTAATGGAACTTTCTTTTTCATCATCCTTCCATCTGAAATTTCTCCATTCATTAATCAATTCATCTAATTCCATTGCAGGGTGGTGCTCTTCTTTCGTTGTTCTCTTCTCCAAGGTTGCTGATTTCTTCCGTTGATTCTAGTTCCAAAGTGGCTTTCTTCTTCTGCTGCTTTTCCTTCTTCCAGCACTCCAGTTGA ATGCATAATAAGCCGATTTCTCCTATGGAAATCAAGTGTGAATGGATCAATGGATACTTGTCCGAGTTCAAAAGTGCAAACCAACGGAAACGAAGTAAGGAGCAATCTGAACAGGACGTCTGTCAGATGATTTCCCAAGGACAGAATTTGATTATGCATGTTGATGCAGCATGTGATTTTGAGAATCGTCGTTGTGGTATTGGTATAGTGCTCCGTAATCGGAATGGTCATTTGAAGTGTGCGAAGCAACAAGGTTTGATTACTTTTACTTCTTCGTTATGTGCTGAAGCGATGGCCATACTTGAAGGTATGAAGATAGCAATCCAAAATGGAGTGCAGCGTTTGACCATCTTTTCAGATTCTTTAGCTTTGATCTCTATTATTATGCGGAAGGAACGGTGTACACTGGAATGTGCTACAATCTTTTGGGACATTGAGAATCTTCGAGGTTCGTTTCAAGAGATCTTTCATGCAAATCGCGAGTTTAATTATTTGGCGGATGCTCTAGCCCGTACAGGGCTGTATGATTCACCACAAATGTGGTTCTCAGACTATCCCGATTGGGGTGGTGCTCTTCTTTCGTTGTTCTCTTCTCCAAGGTTGCTGATTTCTTCCGTTGATTCTAGTTCCAAAGTGGCTTTCTTCTTCTGCTGCTTTTCCTTCTTCCAGCACTCCAGTTGA ATGCATAATAAGCCGATTTCTCCTATGGAAATCAAGTGTGAATGGATCAATGGATACTTGTCCGAGTTCAAAAGTGCAAACCAACGGAAACGAAGTAAGGAGCAATCTGAACAGGACGTCTGTCAGATGATTTCCCAAGGACAGAATTTGATTATGCATGTTGATGCAGCATGTGATTTTGAGAATCGTCGTTGTGGTATTGGTATAGTGCTCCGTAATCGGAATGGTCATTTGAAGTGTGCGAAGCAACAAGGTTTGATTACTTTTACTTCTTCGTTATGTGCTGAAGCGATGGCCATACTTGAAGGTATGAAGATAGCAATCCAAAATGGAGTGCAGCGTTTGACCATCTTTTCAGATTCTTTAGCTTTGATCTCTATTATTATGCGGAAGGAACGGTGTACACTGGAATGTGCTACAATCTTTTGGGACATTGAGAATCTTCGAGGTTCGTTTCAAGAGATCTTTCATGCAAATCGCGAGTTTAATTATTTGGCGGATGCTCTAGCCCGTACAGGGCTGTATGATTCACCACAAATGTGGTTCTCAGACTATCCCGATTGGGGTGGTGCTCTTCTTTCGTTGTTCTCTTCTCCAAGGTTGCTGATTTCTTCCGTTGATTCTAGTTCCAAAGTGGCTTTCTTCTTCTGCTGCTTTTCCTTCTTCCAGCACTCCAGTTGA MHNKPISPMEIKCEWINGYLSEFKSANQRKRSKEQSEQDVCQMISQGQNLIMHVDAACDFENRRCGIGIVLRNRNGHLKCAKQQGLITFTSSLCAEAMAILEGMKIAIQNGVQRLTIFSDSLALISIIMRKERCTLECATIFWDIENLRGSFQEIFHANREFNYLADALARTGLYDSPQMWFSDYPDWGGALLSLFSSPRLLISSVDSSSKVAFFFCCFSFFQHSS Homology
BLAST of Lcy06g011850 vs. ExPASy TrEMBL
Match: J7G0Q7 (Non-ltr retroelement reverse transcriptase OS=Rosa rugosa OX=74645 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 4.6e-09 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 0
BLAST of Lcy06g011850 vs. ExPASy TrEMBL
Match: A0A6D2L9H8 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS44896 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 6.1e-09 Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = 0
BLAST of Lcy06g011850 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.8e-08 Identity = 48/177 (27.12%), Postives = 87/177 (49.15%), Query Frame = 0
BLAST of Lcy06g011850 vs. ExPASy TrEMBL
Match: A0A5C7H0P0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.0e-08 Identity = 48/175 (27.43%), Postives = 86/175 (49.14%), Query Frame = 0
BLAST of Lcy06g011850 vs. ExPASy TrEMBL
Match: F4NCG6 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-07 Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = 0
BLAST of Lcy06g011850 vs. NCBI nr
Match: XP_042969199.1 (uncharacterized protein LOC122301911 [Carya illinoinensis]) HSP 1 Score: 77.4 bits (189), Expect = 1.7e-10 Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 0
BLAST of Lcy06g011850 vs. NCBI nr
Match: KAG6693249.1 (hypothetical protein I3842_10G159900 [Carya illinoinensis]) HSP 1 Score: 72.0 bits (175), Expect = 7.3e-09 Identity = 45/146 (30.82%), Postives = 77/146 (52.74%), Query Frame = 0
BLAST of Lcy06g011850 vs. NCBI nr
Match: AFP55557.1 (non-ltr retroelement reverse transcriptase [Rosa rugosa]) HSP 1 Score: 71.6 bits (174), Expect = 9.6e-09 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = 0
BLAST of Lcy06g011850 vs. NCBI nr
Match: XP_042954689.1 (uncharacterized protein LOC122291107 [Carya illinoinensis]) HSP 1 Score: 71.2 bits (173), Expect = 1.3e-08 Identity = 49/141 (34.75%), Postives = 79/141 (56.03%), Query Frame = 0
BLAST of Lcy06g011850 vs. NCBI nr
Match: CAA7057660.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 71.2 bits (173), Expect = 1.3e-08 Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = 0
BLAST of Lcy06g011850 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06 Identity = 51/146 (34.93%), Postives = 69/146 (47.26%), Query Frame = 0
BLAST of Lcy06g011850 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 4.0e-05 Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 0
BLAST of Lcy06g011850 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 45.8 bits (107), Expect = 5.3e-05 Identity = 39/122 (31.97%), Postives = 58/122 (47.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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