Lcy06g011450 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g011450
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	cell division cycle-associated protein 7-like
Location	Chr06: 13388228 .. 13388611 (-)
RNA-Seq Expression	Lcy06g011450
Synteny	Lcy06g011450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCTCAGAGCAAAAAGCGACTACGAAGATATCAGAAACGCTCGCATTTTGGAGAATCAGGTCACTCTCTAAACTCTTATTATTCTTCTTTTTCATCTCTGTGTGTTTTGATTTGATGAAAAATGGCGGGATCAGGAGCGATTGGCATCGCTAGGGTTGAAGAAGACTATATCCGAACTTCGTTCCATTATTTCCTCTGCAAAATCGGCAAAGATCCAAGCGAGGAAATGTCGCCAAACGCTCACCCAGATTTCTCTGCCTCTTCGTCGCTCCGATCGATTGAAGCAGATTTCACCGGACTCCTCCGGTGCATTGCCAGATTTCTCACCGGAGATCCGACCGATTGAAGGGGAAATCGGTTCAGAATCTCAAATTTGA

mRNA sequence

ATGGGAAGGCTCAGAGCAAAAAGCGACTACGAAGATATCAGAAACGCTCGCATTTTGGAGAATCAGGAGCGATTGGCATCGCTAGGGTTGAAGAAGACTATATCCGAACTTCGTTCCATTATTTCCTCTGCAAAATCGGCAAAGATCCAAGCGAGGAAATGTCGCCAAACGCTCACCCAGATTTCTCTGCCTCTTCGTCGCTCCGATCGATTGAAGCAGATTTCACCGGACTCCTCCGGTGCATTGCCAGATTTCTCACCGGAGATCCGACCGATTGAAGGGGAAATCGGTTCAGAATCTCAAATTTGA

Coding sequence (CDS)

ATGGGAAGGCTCAGAGCAAAAAGCGACTACGAAGATATCAGAAACGCTCGCATTTTGGAGAATCAGGAGCGATTGGCATCGCTAGGGTTGAAGAAGACTATATCCGAACTTCGTTCCATTATTTCCTCTGCAAAATCGGCAAAGATCCAAGCGAGGAAATGTCGCCAAACGCTCACCCAGATTTCTCTGCCTCTTCGTCGCTCCGATCGATTGAAGCAGATTTCACCGGACTCCTCCGGTGCATTGCCAGATTTCTCACCGGAGATCCGACCGATTGAAGGGGAAATCGGTTCAGAATCTCAAATTTGA

Protein sequence

MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQISLPLRRSDRLKQISPDSSGALPDFSPEIRPIEGEIGSESQI

Homology

[Close]

BLAST of Lcy06g011450 vs. ExPASy TrEMBL
Match: A0A6J1KNP6 (cell division cycle-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111495834 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.2e-27
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAKSDYEDIRNARILENQERLASLGLKKT+SELRSI+SSAKSAKIQ RKCR TL +
Sbjct: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTVSELRSIVSSAKSAKIQERKCRHTLPR 60

Query: 61 ISLPLRRSDRLKQISPDSS 80
          ISLPLRRSDRLKQIS DS+
Sbjct: 61 ISLPLRRSDRLKQISLDST 79

[Close]

BLAST of Lcy06g011450 vs. ExPASy TrEMBL
Match: A0A6J1E6S5 (cell division cycle-associated protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111431319 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.0e-27
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAKSDYEDIRNARILENQERLASLGLKKT SELRSIISSAKSAKIQ RKCR TL +
Sbjct: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTASELRSIISSAKSAKIQERKCRHTLPR 60

Query: 61 ISLPLRRSDRLKQISPDSS 80
          ISLPLRRSDRLKQIS DS+
Sbjct: 61 ISLPLRRSDRLKQISLDST 79

[Close]

BLAST of Lcy06g011450 vs. ExPASy TrEMBL
Match: A0A6J1C5M8 (cell division cycle-associated 7-like protein OS=Momordica charantia OX=3673 GN=LOC111008632 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 6.1e-25
Identity = 64/79 (81.01%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
           MGRLRAK DYEDIRNARILENQERLASLGLKKT+SELRSI+SSAKS KIQ  KCRQ +++
Sbjct: 34  MGRLRAKCDYEDIRNARILENQERLASLGLKKTVSELRSILSSAKSPKIQPSKCRQAISR 93

Query: 61  ISLPLRRSDRLKQISPDSS 80
           ISLPLRRSDRLK+I+P+++
Sbjct: 94  ISLPLRRSDRLKRITPETT 112

[Close]

BLAST of Lcy06g011450 vs. ExPASy TrEMBL
Match: A0A5D3BL14 (Cell division cycle-associated protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002490 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-24
Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAK DYED+RNARILEN+ERLASLGLKK ++ELRSIISSAKSAKI ARKC   L++
Sbjct: 1  MGRLRAKCDYEDLRNARILENKERLASLGLKKAVTELRSIISSAKSAKIHARKCHYKLSR 60

Query: 61 ISLPLRRSDRLKQISPDSSGALPDFSP 88
          ISLPLRRSDRLKQISP S+      SP
Sbjct: 61 ISLPLRRSDRLKQISPISTPVRCQISP 87

[Close]

BLAST of Lcy06g011450 vs. ExPASy TrEMBL
Match: A0A0A0LQX9 (zf-4CXXC_R1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042940 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.0e-24
Identity = 65/79 (82.28%), Postives = 73/79 (92.41%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAK DYED+RNARILEN+ERLASLGLKK ++ELRSIISSAKSA+I ARKC  TL++
Sbjct: 1  MGRLRAKCDYEDLRNARILENKERLASLGLKKAVTELRSIISSAKSARIHARKCHNTLSR 60

Query: 61 ISLPLRRSDRLKQISPDSS 80
          ISLPLRRSDRLKQISP S+
Sbjct: 61 ISLPLRRSDRLKQISPVST 79

[Close]

BLAST of Lcy06g011450 vs. NCBI nr
Match: XP_023001804.1 (cell division cycle-associated protein 7-like [Cucurbita maxima])

HSP 1 Score: 131.3 bits (329), Expect = 4.6e-27
Identity = 71/79 (89.87%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAKSDYEDIRNARILENQERLASLGLKKT+SELRSI+SSAKSAKIQ RKCR TL +
Sbjct: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTVSELRSIVSSAKSAKIQERKCRHTLPR 60

Query: 61 ISLPLRRSDRLKQISPDSS 80
          ISLPLRRSDRLKQIS DS+
Sbjct: 61 ISLPLRRSDRLKQISLDST 79

[Close]

BLAST of Lcy06g011450 vs. NCBI nr
Match: XP_023519736.1 (cell division cycle-associated protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 7.9e-27
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAKSDYEDIRNARILENQERLASLGLKKT SELRSIISSAKSAKIQ RKCR TL +
Sbjct: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTASELRSIISSAKSAKIQGRKCRHTLPR 60

Query: 61 ISLPLRRSDRLKQISPDSS 80
          ISLPLRRSDRLKQIS DS+
Sbjct: 61 ISLPLRRSDRLKQISLDST 79

[Close]

BLAST of Lcy06g011450 vs. NCBI nr
Match: XP_022923677.1 (cell division cycle-associated protein 7-like [Cucurbita moschata])

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAKSDYEDIRNARILENQERLASLGLKKT SELRSIISSAKSAKIQ RKCR TL +
Sbjct: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTASELRSIISSAKSAKIQERKCRHTLPR 60

Query: 61 ISLPLRRSDRLKQISPDSS 80
          ISLPLRRSDRLKQIS DS+
Sbjct: 61 ISLPLRRSDRLKQISLDST 79

[Close]

BLAST of Lcy06g011450 vs. NCBI nr
Match: KAG7019901.1 (Cell division cycle-associated 7-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
          MGRLRAKSDYEDIRNARILENQERLASLGLKKT SELRSIISSAKSAKIQ RKCR TL +
Sbjct: 1  MGRLRAKSDYEDIRNARILENQERLASLGLKKTASELRSIISSAKSAKIQERKCRHTLPR 60

Query: 61 ISLPLRRSDRLKQISPDSS 80
          ISLPLRRSDRLKQIS DS+
Sbjct: 61 ISLPLRRSDRLKQISLDST 79

[Close]

BLAST of Lcy06g011450 vs. NCBI nr
Match: KAG6584308.1 (Cell division cycle-associated 7-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MGRLRAKSDYEDIRNARILENQERLASLGLKKTISELRSIISSAKSAKIQARKCRQTLTQ 60
           MGRLRAKSDYEDIRNARILENQERLASLGLKKT SELRSIISSAKSAKIQ RKCR TL +
Sbjct: 63  MGRLRAKSDYEDIRNARILENQERLASLGLKKTASELRSIISSAKSAKIQERKCRHTLPR 122

Query: 61  ISLPLRRSDRLKQISPDSS 80
           ISLPLRRSDRLKQIS DS+
Sbjct: 123 ISLPLRRSDRLKQISLDST 141

The following BLAST results are available for this feature:

BLAST of Lcy06g011450 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g011450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNP6	2.2e-27	89.87	cell division cycle-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1E6S5	5.0e-27	91.14	cell division cycle-associated protein 7-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1C5M8	6.1e-25	81.01	cell division cycle-associated 7-like protein OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3BL14	1.0e-24	77.01	Cell division cycle-associated protein 7-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0LQX9	1.0e-24	82.28	zf-4CXXC_R1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042940...	[more]

BLAST of Lcy06g011450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001804.1	4.6e-27	89.87	cell division cycle-associated protein 7-like [Cucurbita maxima]	[more]
XP_023519736.1	7.9e-27	91.14	cell division cycle-associated protein 7-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923677.1	1.0e-26	91.14	cell division cycle-associated protein 7-like [Cucurbita moschata]	[more]
KAG7019901.1	1.0e-26	91.14	Cell division cycle-associated 7-like protein [Cucurbita argyrosperma subsp. arg...	[more]
KAG6584308.1	1.0e-26	91.14	Cell division cycle-associated 7-like protein, partial [Cucurbita argyrosperma s...	[more]

BLAST of Lcy06g011450 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..102
None	No IPR available	PANTHER	PTHR31169:SF15	EXPRESSED PROTEIN	coord: 1..77
IPR040221	CDCA7/CDA7L	PANTHER	PTHR31169	OS05G0300700 PROTEIN	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g011450.1	Lcy06g011450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus