Lcy06g011310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g011310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr06: 13195583 .. 13198274 (+)
RNA-Seq Expression	Lcy06g011310
Synteny	Lcy06g011310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTCTCCCACTGCTCAGGATCATCAACTTCGTCAAAACTCCGTCGGCCGACGATCTGGTCCCCTTTAAAATCTCGTCGAATGCCCTGCTGCTCCGGATCTTCGTCCTCGACACCTTGAGAAACGAAGGACGAAGGGCGAAGGAGGAAAACCCCCTTCATTTTCCCCTTCGTTTCTCAGTTTTATAAAAAAAATGAAGGGGGTTTGCGTTCGAGGAAGAAGAAGACCCGCAGGCGGCGATCTGACGCGATTCCAGTGCAAGTTTGACGGCGATTCCAGTGCGAGCTTGACGGCGGCTGTTCAGATCTGTTAAGAGCTTGATGGGTTTTGCCGTTCAAATTCATTATGTGCAAGATTGACGACGGCTGTTCAGAGCTTGACGGGTTTTTTCGTTCAGATCTGTTCGGTGCAAGCTTCAAATCCAGGGCTTTATTGTGGCCATCCCCGGAGGCGATGGTATCACGAGCGAGCTTCAGAAGAAAGGCCCGAGATCGGGGTTATCCAGCGAGGAATCCGACGGAAACTGGGCCGCTGTCGAACTCTCCGGTTGAAGCTTCTTCTTCCCGTTGGGCGAGGGCTTGGATCGGTAAGGGTTTTTCTTCCCGTTGGGCGAGGACTCTTCGGTTGAAGGGTGAGGGTTTTTCTTCGCCTGAGGAGATGGGGCCGGTGACTCGACGCCGACAAGGTGTCAGGGAAGGAGATCCAGAGCACGGGGCGGTTGTCGGCGCTGAAAACGGAGGAGGGAGTCCCTCCCCGTTTCGCTTTTTTTTTTAAATTAAAAAAAAAAAAAAAAAAAAAAAAAATACCACCAGCGGTAGGGTTAGGAAAGAAGATGAAAAGGGGTATTTATTATTATTATTTTTTTTTGACAACAGATGAAAAGGGGTATGAAGAATAAATGATAGTTATATATTATTTTATATTTAAATGATAGTTATATATTATTTTATATTTAAAAATTAAAAAATATTTTTTTAATAAAAAAAATACTTGCCACGACAGCATTCCGTTAGCATTTAACAGAAAAATGGATGAAGGGACTAAAATGAAACTAAAACCAAACCTCATGGACTAAATTGTTAAGTTTGAAAACTTATGGAACAAAATGAAACCTAACCAAAACCTCAGGGACTAAAAGTGTACTTTCCCTTAAAACAATTACGAAACTTGATTTCGGAAATTGAAAACTATTTAGATTTTTTAATTTTTTTCATCTTTTATTTTTTTAATTAAAACAATTATGAAATTTGATTTTTTTTAATTTTTTATCTTTTATTTTTTAATTAAAAAATACGAAATTTGATTTCAGAACTTCTAATTGGTATGTTTTTCCATTGATTTCTCTAGTATATGGTATGAATTAAAATATTAGTGACAGAGAGTTGGAATATATAATTTTATCTTTTTTCAGAAAAAAAAAAAAGAATATATAATTTTATCTTCCACTTCAATTACATCTTTTTAACTTTTAAGGAGTTTAAATTCTAAACAATTTTTATACAAAATGTTTTTTAAAAAATGCATTCTTGAAAAAAATTAGTAATAAAATTTAAATTGAATATCAGATTTTTATTTTATTTTTTTTAATAAGAATATCAGAATATTAGTTCTTCTTTTCTTTTCTTCGAAAAAAAGGTAGTCATGGTTCAAGTAAGACTCACAAAATATATATATATATATATATATATATATATATATATTAATTAGTACCGTTTGAAATTTTCAAAATTAATAAATACATCCATTTATTTTCCGTAAAAAGAAGGACAAAGTTCACCAATAATGTAGTTAAAAAAACAAATGACAAAATTAGAGTAGTTTTGAAAAATTTAATTTTAATAATGTAAATAAAAAAACAAATTATAAATTTGAGGTAAGAGAGAAAAGTATTGACAAATGTAGAGTAGTTGTTGCCAGCAATGAACTCGTGTACCACCTAGTCGATTTAGGGTGGTCTATGTGGCGGTGATGAGGTGGTAAAAATCGTGTACGTTGTACACGAGTTTGCAAAGAAATCGTGTACGATGACACGATTTCCATATTTAGAAATCGCGTACCACATACACGATTTCCATATTTTGAAATTTTTTAATAAAATTATTTTTTCCTTTTATATCTATAATATGTTATATATATAAATTTATGTATAACTTTGTAACTTTTCTCTATATTTAAATTTTTATATATTTGTCTGTATAAAATTAAAAAAAAATAAAGAGAAAAAATTAACTAATTTACAACCGTATTCAACCCTTACTAAACATTAAAATAAACATATGATCTATATATATATATATATATATATATATATATATATATATATATATATATATTGCAAATTTTAAATAATATATAAAACAAATGATTAAATAAAAAATTAAAAAAAAAAAAAAAGCCAGTTATGATCAATTTGCATAATATATAAAACAAATGATTAAATAAAAAATTAAAAAAAAAAAAAAAAAAGCCAGTTATGATCTTTGGCACTCTAGAATCTTTGTTAACCACTGAACCAAAAGAATGCTTTGAAGTATGAGTTTAGGAATATTGTACCTATTCTTACCGAACTCGCGTACATGGTACACGAGTTCGATGTGGAACTCGCGTACCTCGTACGCGAGTTTTGTGTTTCTGGTGCGTATTTCTCCACGGTGGCACTACTTGGAGACGTGTACGCGATTTACACTTAG

mRNA sequence

CTCTCTTCTCCCACTGCTCAGGATCATCAACTTCGTCAAAACTCCGTCGGCCGACGATCTGGTCCCCTTTAAAATCTCGTCGAATGCCCTGCTGCTCCGGATCTTCGTCCTCGACACCTTGAGAAACGAAGGACGAAGGGCGAAGGAGGAAAACCCCCTTCATTTTCCCCTTCGTTTCTCAGTTTTATAAAAAAAATGAAGGGGGTTTGCGTTCGAGGAAGAAGAAGACCCGCAGGCGGCGATCTGACGCGATTCCAGTGCAAGTTTGACGGCGATTCCAGTGCGAGCTTGACGGCGGCTGTTCAGATCTGTTAAGAGCTTGATGGGTTTTGCCGTTCAAATTCATTATGTGCAAGATTGACGACGGCTGTTCAGAGCTTGACGGGTTTTTTCGTTCAGATCTGTTCGGTGCAAGCTTCAAATCCAGGGCTTTATTGTGGCCATCCCCGGAGGCGATGGTATCACGAGCGAGCTTCAGAAGAAAGGCCCGAGATCGGGGTTATCCAGCGAGGAATCCGACGGAAACTGGGCCGCTGTCGAACTCTCCGGTTGAAGCTTCTTCTTCCCGTTGGGCGAGGGCTTGGATCGGTAAGGGTTTTTCTTCCCGTTGGGCGAGGACTCTTCGGTTGAAGGGTGAGGGTTTTTCTTCGCCTGAGGAGATGGGGCCGGTGACTCGACGCCGACAAGGTGTCAGGGAAGGAGATCCAGAGCACGGGGCGGTTGTCGGCGCTGAAAACGGAGGAGGGAGTCCCTCCCCGAATATTGTACCTATTCTTACCGAACTCGCGTACATGGTACACGAGTTCGATGTGGAACTCGCGTACCTCGTACGCGAGTTTTGTGTTTCTGGTGCGTATTTCTCCACGGTGGCACTACTTGGAGACGTGTACGCGATTTACACTTAG

Coding sequence (CDS)

ATGTGCAAGATTGACGACGGCTGTTCAGAGCTTGACGGGTTTTTTCGTTCAGATCTGTTCGGTGCAAGCTTCAAATCCAGGGCTTTATTGTGGCCATCCCCGGAGGCGATGGTATCACGAGCGAGCTTCAGAAGAAAGGCCCGAGATCGGGGTTATCCAGCGAGGAATCCGACGGAAACTGGGCCGCTGTCGAACTCTCCGGTTGAAGCTTCTTCTTCCCGTTGGGCGAGGGCTTGGATCGGTAAGGGTTTTTCTTCCCGTTGGGCGAGGACTCTTCGGTTGAAGGGTGAGGGTTTTTCTTCGCCTGAGGAGATGGGGCCGGTGACTCGACGCCGACAAGGTGTCAGGGAAGGAGATCCAGAGCACGGGGCGGTTGTCGGCGCTGAAAACGGAGGAGGGAGTCCCTCCCCGAATATTGTACCTATTCTTACCGAACTCGCGTACATGGTACACGAGTTCGATGTGGAACTCGCGTACCTCGTACGCGAGTTTTGTGTTTCTGGTGCGTATTTCTCCACGGTGGCACTACTTGGAGACGTGTACGCGATTTACACTTAG

Protein sequence

MCKIDDGCSELDGFFRSDLFGASFKSRALLWPSPEAMVSRASFRRKARDRGYPARNPTETGPLSNSPVEASSSRWARAWIGKGFSSRWARTLRLKGEGFSSPEEMGPVTRRRQGVREGDPEHGAVVGAENGGGSPSPNIVPILTELAYMVHEFDVELAYLVREFCVSGAYFSTVALLGDVYAIYT

Homology

The following BLAST results are available for this feature:

BLAST of Lcy06g011310 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g011310 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g011310 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g011310 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g011310.1	Lcy06g011310.1	mRNA