Lcy06g007900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g007900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Dof zinc finger protein
Location	Chr06: 7708258 .. 7709129 (-)
RNA-Seq Expression	Lcy06g007900
Synteny	Lcy06g007900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTCCCAAATAACCAATTCTCTCTCTCTGAATCTCTCTGGCTGTGAAAAGATGATGATGGCAGAGATTAGAAAGAAGAATGAAGATCAAGAGGGAGGAGGAATTAAGCTGTTTGGGACAACAATTATGTTGCAGAATGAAGTGAAAGAAGAAGAAGAACCCAACAACAAATCAGCTGAAAAGAAGCCTGAAAAGATCATTCCTTGCCCAAGATGCAAAAGCCTCGACACCAAATTTTGTTATTTCAACAATTACAACGTTAATCAGCCAAGGCATTTCTGCAAGGGTTGTCAGCGCTACTGGACCGCCGGTGGGGCCCTCCGGAATGTCCCCGTCGGTGCCGGCCGCCGGAAGACCAAGCCTCCCTGCCGGACCTTCGCTGGCTTGCCGGAAAATTGCGTCTTTGATTCTTCCGGGATGGTCGCCGTGCAGCCGTTTGAGTTGGAGGGTATGGTGGACGACTGGCATGTCGTCGCCGCCGCCGCCGCTGCACAAAGTGGTTTCCGGCAAATTTTACCTGTGAAGAGGCGGAGGGATTGCCAAGACGGTCAAACTTGTTGATTCTTCTTCCCTCCTTTCTTTATTTTTTTTCTTTTGTGTTAAGAATTTCGATGTGATTGAGGAAAAAAATTGAAAAAAGAAACGTGTTTTGATGGCGTTAGTTTTGTACAAATACAGACTTTGTTTATAGTTTTTTGGGGAAAAATATGGATTTTAAGGATCGATAATGGATATGATCGTATCATCTGATTTGTGAACACTCCGATCGAACATCAATAATTACTGTCGAAAAGGTCAAAACCATGCTTCATAATTGATGAGATAAGATCCAATTAAATTAAGTTTATAAACATTAAGATGCTTATTAATT

mRNA sequence

CGATTCCCAAATAACCAATTCTCTCTCTCTGAATCTCTCTGGCTGTGAAAAGATGATGATGGCAGAGATTAGAAAGAAGAATGAAGATCAAGAGGGAGGAGGAATTAAGCTGTTTGGGACAACAATTATGTTGCAGAATGAAGTGAAAGAAGAAGAAGAACCCAACAACAAATCAGCTGAAAAGAAGCCTGAAAAGATCATTCCTTGCCCAAGATGCAAAAGCCTCGACACCAAATTTTGTTATTTCAACAATTACAACGTTAATCAGCCAAGGCATTTCTGCAAGGGTTGTCAGCGCTACTGGACCGCCGGTGGGGCCCTCCGGAATGTCCCCGTCGGTGCCGGCCGCCGGAAGACCAAGCCTCCCTGCCGGACCTTCGCTGGCTTGCCGGAAAATTGCGTCTTTGATTCTTCCGGGATGGTCGCCGTGCAGCCGTTTGAGTTGGAGGGTATGGTGGACGACTGGCATGTCGTCGCCGCCGCCGCCGCTGCACAAAGTGGTTTCCGGCAAATTTTACCTGTGAAGAGGCGGAGGGATTGCCAAGACGGTCAAACTTGTTGATTCTTCTTCCCTCCTTTCTTTATTTTTTTTCTTTTGTGTTAAGAATTTCGATGTGATTGAGGAAAAAAATTGAAAAAAGAAACGTGTTTTGATGGCGTTAGTTTTGTACAAATACAGACTTTGTTTATAGTTTTTTGGGGAAAAATATGGATTTTAAGGATCGATAATGGATATGATCGTATCATCTGATTTGTGAACACTCCGATCGAACATCAATAATTACTGTCGAAAAGGTCAAAACCATGCTTCATAATTGATGAGATAAGATCCAATTAAATTAAGTTTATAAACATTAAGATGCTTATTAATT

Coding sequence (CDS)

ATGATGATGGCAGAGATTAGAAAGAAGAATGAAGATCAAGAGGGAGGAGGAATTAAGCTGTTTGGGACAACAATTATGTTGCAGAATGAAGTGAAAGAAGAAGAAGAACCCAACAACAAATCAGCTGAAAAGAAGCCTGAAAAGATCATTCCTTGCCCAAGATGCAAAAGCCTCGACACCAAATTTTGTTATTTCAACAATTACAACGTTAATCAGCCAAGGCATTTCTGCAAGGGTTGTCAGCGCTACTGGACCGCCGGTGGGGCCCTCCGGAATGTCCCCGTCGGTGCCGGCCGCCGGAAGACCAAGCCTCCCTGCCGGACCTTCGCTGGCTTGCCGGAAAATTGCGTCTTTGATTCTTCCGGGATGGTCGCCGTGCAGCCGTTTGAGTTGGAGGGTATGGTGGACGACTGGCATGTCGTCGCCGCCGCCGCCGCTGCACAAAGTGGTTTCCGGCAAATTTTACCTGTGAAGAGGCGGAGGGATTGCCAAGACGGTCAAACTTGTTGA

Protein sequence

MMMAEIRKKNEDQEGGGIKLFGTTIMLQNEVKEEEEPNNKSAEKKPEKIIPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVFDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC

Homology

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BLAST of Lcy06g007900 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-42
Identity = 95/179 (53.07%), Postives = 114/179 (63.69%), Query Frame = 0


Query: 13  QEGGGIKLFGTTIM----LQNEVKEEEEPNNK-----------------SAEKKPEKIIP 72
           Q+  GIKLFG TI     +   +K+EE+   +                 +AEK+P+KIIP
Sbjct: 4   QDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIP 63

Query: 73  CPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAG 132
           CPRCKS++TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R   G
Sbjct: 64  CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GG 123

Query: 133 LPENCVFDSSGMVAVQPFELEG-MVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
             E      +   AV   EL+  +V++W    AA A+  GFR   PVKR R   DGQ+C
Sbjct: 124 FAE---LLGAATGAVDQVELDALLVEEWR---AATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of Lcy06g007900 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.7e-42
Identity = 93/175 (53.14%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 13  QEGGGIKLFGTTIMLQNE-VKEEEE----------------PNNKSAEKKPEKIIPCPRC 72
           Q+  GIKLFG TI      +K EEE                 ++ +AEK+P+KII CPRC
Sbjct: 4   QDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRC 63

Query: 73  KSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPEN 132
           KS++TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R   G+   
Sbjct: 64  KSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM--- 123

Query: 133 CVFDSSGMVAVQPFELEG-MVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
            + D +G+  V+   + G +V++W    AAAAA   FR   P+KR R   DGQ+C
Sbjct: 124 -LGDGNGVRQVE--LINGLLVEEWQ--HAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of Lcy06g007900 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-28
Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 18  IKLFGTTIMLQN--EVKEEEEPNNKSAE-----------KKPEKIIPCPRCKSLDTKFCY 77
           IKLFG  I      EV +EEE  N++             KKP KI+PCPRC S++TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 78  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 104
           +NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of Lcy06g007900 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-28
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 44  KKPEKIIPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 103
           KKP+KI+PCPRC S++TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK K
Sbjct: 132 KKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNK 191

Query: 104 PP 106
            P
Sbjct: 192 SP 193

[Close]

BLAST of Lcy06g007900 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 4.2e-28
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 30  EVKEEEEPNNKSAEKKPEKIIPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGA 89
           E  ++  P+ K+  KKP KI+PCPRCKS++TKFCY+NNYN+NQPRHFCK CQRYWTAGG 
Sbjct: 91  EDNQQTTPDGKTL-KKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGT 150

Query: 90  LRNVPVGAGRRKTK 104
           +RNVPVGAGRRK K
Sbjct: 151 MRNVPVGAGRRKNK 163

[Close]

BLAST of Lcy06g007900 vs. ExPASy TrEMBL
Match: A0A5A7UQX1 (Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002240 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 144/179 (80.45%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 2   MMAEIR--KKNEDQEGGGIKLFGTTIMLQN-----EVKEEEEPNNKS----AEKKPEKII 61
           MM E +  K NEDQ GGGIKLFG TIMLQN     + +EEEE  NKS     EK+PEKII
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEEANKSDQQTLEKRPEKII 60

Query: 62  PCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFA 121
           PCPRCKS+DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF 
Sbjct: 61  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFG 120

Query: 122 GLPENCVFDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           GLPENCVFDSSG+V VQPFELEGMV+ WH V AAAA Q GFRQILPVKRRRDCQDGQTC
Sbjct: 121 GLPENCVFDSSGIVTVQPFELEGMVEKWHAV-AAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Lcy06g007900 vs. ExPASy TrEMBL
Match: A0A1S3B895 (dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 144/179 (80.45%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 2   MMAEIR--KKNEDQEGGGIKLFGTTIMLQN-----EVKEEEEPNNKS----AEKKPEKII 61
           MM E +  K NEDQ GGGIKLFG TIMLQN     + +EEEE  NKS     EK+PEKII
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEEANKSDQQTLEKRPEKII 60

Query: 62  PCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFA 121
           PCPRCKS+DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF 
Sbjct: 61  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFG 120

Query: 122 GLPENCVFDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           GLPENCVFDSSG+V VQPFELEGMV+ WH V AAAA Q GFRQILPVKRRRDCQDGQTC
Sbjct: 121 GLPENCVFDSSGIVTVQPFELEGMVEKWHAV-AAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Lcy06g007900 vs. ExPASy TrEMBL
Match: A0A0A0LV52 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 144/181 (79.56%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 2   MMAEIR--KKNEDQEGGGIKLFGTTIMLQN------EVKEEEEPNNK----SAEKKPEKI 61
           MM E +  K NEDQ  GGIKLFG TIMLQN      E +EEEE  NK    S EK+PEKI
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEENKSDQQSLEKRPEKI 60

Query: 62  IPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTF 121
           IPCPRCKS+DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF
Sbjct: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTF 120

Query: 122 AGLPENCVFDSSGM-VAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQT 170
            GLPENCVFDSSG+ V VQPFELEGMV+ WHVV AAAA Q GFRQILPVKRRRDC DGQT
Sbjct: 121 GGLPENCVFDSSGINVTVQPFELEGMVEKWHVV-AAAATQGGFRQILPVKRRRDCPDGQT 180

[Close]

BLAST of Lcy06g007900 vs. ExPASy TrEMBL
Match: A0A6J1KLC9 (cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 3.1e-74
Identity = 139/172 (80.81%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MMMAEIRKKNEDQEGGGIKLFGTTIMLQNEVKEEEEPNN---KSAEKKPEKIIPCPRCKS 60
           MMMAE +K +EDQE GGIKLFG TIML N    +EEPN+   +S EK+P+KIIPCPRCKS
Sbjct: 1   MMMAERKKNDEDQE-GGIKLFGATIMLHNNRILKEEPNDSDQQSPEKRPDKIIPCPRCKS 60

Query: 61  LDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCV 120
           +DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+TF GLPENCV
Sbjct: 61  MDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGGLPENCV 120

Query: 121 FDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           FDSSG+VAVQPFELEGMV++WHVV  AAAA  GFRQILPVKRRR  QDGQ C
Sbjct: 121 FDSSGIVAVQPFELEGMVEEWHVV--AAAAHDGFRQILPVKRRRGYQDGQIC 169

[Close]

BLAST of Lcy06g007900 vs. ExPASy TrEMBL
Match: A0A6J1EH23 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111434231 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 9.0e-74
Identity = 138/172 (80.23%), Postives = 150/172 (87.21%), Query Frame = 0


Query: 1   MMMAEIRKKNEDQEGGGIKLFGTTIMLQNEVKEEEEPN---NKSAEKKPEKIIPCPRCKS 60
           MMMAE RKKN++   GGIKLFG TIML +    +EEPN    +S EK+P+KIIPCPRCKS
Sbjct: 1   MMMAE-RKKNDEDHEGGIKLFGATIMLHDNRILKEEPNVSDQQSPEKRPDKIIPCPRCKS 60

Query: 61  LDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCV 120
           +DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+TF GLPENCV
Sbjct: 61  MDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGGLPENCV 120

Query: 121 FDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           FDSSG+VAVQPFELEGMV++WHVV  AAAAQ GFRQILPVKRRR  QDGQ C
Sbjct: 121 FDSSGIVAVQPFELEGMVEEWHVV--AAAAQDGFRQILPVKRRRGYQDGQIC 169

[Close]

BLAST of Lcy06g007900 vs. NCBI nr
Match: XP_038895022.1 (dof zinc finger protein DOF1.5-like [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 145/180 (80.56%), Postives = 153/180 (85.00%), Query Frame = 0


Query: 2   MMAEIRKKNEDQEGGGIKLFGTTIMLQN---------EVKEEEEPN---NKSAEKKPEKI 61
           MM E    NE    GGIKLFGTTIMLQN         + +EEEEPN    +S EK+PEKI
Sbjct: 1   MMGERENNNE----GGIKLFGTTIMLQNNRQIIKEEEDEEEEEEPNKSDQQSLEKRPEKI 60

Query: 62  IPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTF 121
           IPCPRCKS+DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTF
Sbjct: 61  IPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTF 120

Query: 122 AGLPENCVFDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           AGLPENCVFDSSGMVAVQPFELEGMV++WHVV AAAA Q GFRQ+LPVKRRRDCQDGQTC
Sbjct: 121 AGLPENCVFDSSGMVAVQPFELEGMVEEWHVV-AAAATQGGFRQMLPVKRRRDCQDGQTC 175

[Close]

BLAST of Lcy06g007900 vs. NCBI nr
Match: XP_008443229.1 (PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc finger protein DOF1.5 [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 3.1e-76
Identity = 144/179 (80.45%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 2   MMAEIR--KKNEDQEGGGIKLFGTTIMLQN-----EVKEEEEPNNKS----AEKKPEKII 61
           MM E +  K NEDQ GGGIKLFG TIMLQN     + +EEEE  NKS     EK+PEKII
Sbjct: 1   MMGERKHDKNNEDQHGGGIKLFGATIMLQNKRQIIKEEEEEEEANKSDQQTLEKRPEKII 60

Query: 62  PCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFA 121
           PCPRCKS+DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCRTF 
Sbjct: 61  PCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCRTFG 120

Query: 122 GLPENCVFDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           GLPENCVFDSSG+V VQPFELEGMV+ WH V AAAA Q GFRQILPVKRRRDCQDGQTC
Sbjct: 121 GLPENCVFDSSGIVTVQPFELEGMVEKWHAV-AAAATQGGFRQILPVKRRRDCQDGQTC 178

[Close]

BLAST of Lcy06g007900 vs. NCBI nr
Match: XP_023519982.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.0 bits (741), Expect = 1.3e-74
Identity = 140/172 (81.40%), Postives = 152/172 (88.37%), Query Frame = 0


Query: 1   MMMAEIRKKNEDQEGGGIKLFGTTIMLQNEVKEEEEPNN---KSAEKKPEKIIPCPRCKS 60
           MMMAE +K +EDQE GGIKLFG TIML N    +EEPN+   +S EK+P+KIIPCPRCKS
Sbjct: 1   MMMAERKKNDEDQE-GGIKLFGATIMLHNNRILKEEPNDSDQQSTEKRPDKIIPCPRCKS 60

Query: 61  LDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCV 120
           +DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+TF GLPENCV
Sbjct: 61  MDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGGLPENCV 120

Query: 121 FDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           FDSSG+VAVQPFELEGMV++WHVV  AAAAQ GFRQILPVKRRR  QDGQ C
Sbjct: 121 FDSSGIVAVQPFELEGMVEEWHVV--AAAAQDGFRQILPVKRRRGYQDGQIC 169

[Close]

BLAST of Lcy06g007900 vs. NCBI nr
Match: XP_023000934.1 (cyclic dof factor 4-like [Cucurbita maxima])

HSP 1 Score: 287.7 bits (735), Expect = 6.4e-74
Identity = 139/172 (80.81%), Postives = 151/172 (87.79%), Query Frame = 0


Query: 1   MMMAEIRKKNEDQEGGGIKLFGTTIMLQNEVKEEEEPNN---KSAEKKPEKIIPCPRCKS 60
           MMMAE +K +EDQE GGIKLFG TIML N    +EEPN+   +S EK+P+KIIPCPRCKS
Sbjct: 1   MMMAERKKNDEDQE-GGIKLFGATIMLHNNRILKEEPNDSDQQSPEKRPDKIIPCPRCKS 60

Query: 61  LDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCV 120
           +DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPC+TF GLPENCV
Sbjct: 61  MDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCQTFGGLPENCV 120

Query: 121 FDSSGMVAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
           FDSSG+VAVQPFELEGMV++WHVV  AAAA  GFRQILPVKRRR  QDGQ C
Sbjct: 121 FDSSGIVAVQPFELEGMVEEWHVV--AAAAHDGFRQILPVKRRRGYQDGQIC 169

[Close]

BLAST of Lcy06g007900 vs. NCBI nr
Match: XP_011657769.2 (dof zinc finger protein DOF1.5 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 8.3e-74
Identity = 144/183 (78.69%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 2   MMAEIR--KKNEDQEGGGIKLFGTTIMLQN--------EVKEEEEPNNK----SAEKKPE 61
           MM E +  K NEDQ  GGIKLFG TIMLQN        E +EEEE  NK    S EK+PE
Sbjct: 1   MMGERKHDKNNEDQHEGGIKLFGATIMLQNKRQIIKEEEEEEEEEEANKSDQQSLEKRPE 60

Query: 62  KIIPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCR 121
           KIIPCPRCKS+DTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRRKTKPPCR
Sbjct: 61  KIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKTKPPCR 120

Query: 122 TFAGLPENCVFDSSGM-VAVQPFELEGMVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDG 170
           TF GLPENCVFDSSG+ V VQPFELEGMV+ WHVV AAAA Q GFRQILPVKRRRDC DG
Sbjct: 121 TFGGLPENCVFDSSGINVTVQPFELEGMVEKWHVV-AAAATQGGFRQILPVKRRRDCPDG 180

[Close]

BLAST of Lcy06g007900 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 174.1 bits (440), Expect = 9.6e-44
Identity = 95/179 (53.07%), Postives = 114/179 (63.69%), Query Frame = 0


Query: 13  QEGGGIKLFGTTIM----LQNEVKEEEEPNNK-----------------SAEKKPEKIIP 72
           Q+  GIKLFG TI     +   +K+EE+   +                 +AEK+P+KIIP
Sbjct: 4   QDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIP 63

Query: 73  CPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAG 132
           CPRCKS++TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRK+KPP R   G
Sbjct: 64  CPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV-GG 123

Query: 133 LPENCVFDSSGMVAVQPFELEG-MVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
             E      +   AV   EL+  +V++W    AA A+  GFR   PVKR R   DGQ+C
Sbjct: 124 FAE---LLGAATGAVDQVELDALLVEEWR---AATASHGGFRHDFPVKRLRCYTDGQSC 175

[Close]

BLAST of Lcy06g007900 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 171.8 bits (434), Expect = 4.7e-43
Identity = 93/175 (53.14%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 13  QEGGGIKLFGTTIMLQNE-VKEEEE----------------PNNKSAEKKPEKIIPCPRC 72
           Q+  GIKLFG TI      +K EEE                 ++ +AEK+P+KII CPRC
Sbjct: 4   QDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRC 63

Query: 73  KSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPEN 132
           KS++TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVPVGAGRRK+KPP R   G+   
Sbjct: 64  KSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGM--- 123

Query: 133 CVFDSSGMVAVQPFELEG-MVDDWHVVAAAAAAQSGFRQILPVKRRRDCQDGQTC 170
            + D +G+  V+   + G +V++W    AAAAA   FR   P+KR R   DGQ+C
Sbjct: 124 -LGDGNGVRQVE--LINGLLVEEWQ--HAAAAAHGSFRHDFPMKRLRCYSDGQSC 170

[Close]

BLAST of Lcy06g007900 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 18  IKLFGTTIMLQN--EVKEEEEPNNKSAE-----------KKPEKIIPCPRCKSLDTKFCY 77
           IKLFG  I      EV +EEE  N++             KKP KI+PCPRC S++TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 78  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 104
           +NNYNVNQPRHFCK CQRYWT+GG +R+VP+GAGRRK K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of Lcy06g007900 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 44  KKPEKIIPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 103
           KKP+KI+PCPRC S++TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK K
Sbjct: 132 KKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNK 191

Query: 104 PP 106
            P
Sbjct: 192 SP 193

[Close]

BLAST of Lcy06g007900 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 44  KKPEKIIPCPRCKSLDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTK 103
           KKP+KI+PCPRC S++TKFCY+NNYNVNQPRHFCK CQRYWTAGG +RNVPVGAGRRK K
Sbjct: 132 KKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNK 191

Query: 104 PP 106
            P
Sbjct: 192 SP 193

The following BLAST results are available for this feature:

BLAST of Lcy06g007900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	1.3e-42	53.07	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	6.7e-42	53.14	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q8W1E3	2.5e-28	59.60	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q93ZL5	3.2e-28	82.26	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8LFV3	4.2e-28	71.62	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of Lcy06g007900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQX1	1.5e-76	80.45	Dof zinc finger protein DOF1.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B895	1.5e-76	80.45	dof zinc finger protein DOF1.5 OS=Cucumis melo OX=3656 GN=LOC103486868 PE=4 SV=1	[more]
A0A0A0LV52	1.4e-74	79.56	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G475990 PE...	[more]
A0A6J1KLC9	3.1e-74	80.81	cyclic dof factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111495221 PE=4 SV=1	[more]
A0A6J1EH23	9.0e-74	80.23	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11143423...	[more]

BLAST of Lcy06g007900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895022.1	2.3e-76	80.56	dof zinc finger protein DOF1.5-like [Benincasa hispida]	[more]
XP_008443229.1	3.1e-76	80.45	PREDICTED: dof zinc finger protein DOF1.5 [Cucumis melo] >KAA0057037.1 dof zinc ...	[more]
XP_023519982.1	1.3e-74	81.40	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000934.1	6.4e-74	80.81	cyclic dof factor 4-like [Cucurbita maxima]	[more]
XP_011657769.2	8.3e-74	78.69	dof zinc finger protein DOF1.5 [Cucumis sativus]	[more]

BLAST of Lcy06g007900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	9.6e-44	53.07	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	4.7e-43	53.14	Dof-type zinc finger DNA-binding family protein	[more]
AT5G62430.1	1.8e-29	59.60	cycling DOF factor 1	[more]
AT5G39660.1	2.3e-29	82.26	cycling DOF factor 2	[more]
AT5G39660.2	2.3e-29	82.26	cycling DOF factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 48..103 e-value: 1.0E-31 score: 108.8
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 52..88
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 50..104 score: 28.388029
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 14..162
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 14..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g007900.1	Lcy06g007900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity