Lcy06g007590 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g007590
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr06: 7359660 .. 7360091 (+)
RNA-Seq ExpressionLcy06g007590
SyntenyLcy06g007590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGGGTTATGGCAAAATCAGAATCAGCCATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA

mRNA sequence

ATGAATTGGGTTATGGCAAAATCAGAATCAGCCATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA

Coding sequence (CDS)

ATGAATTGGGTTATGGCAAAATCAGAATCAGCCATGGGAATGAACTCAAAGACGAAGGCCGATATCAGTAGCAGCAGGAACTATTCTCTGAACTCCCTATCCTTCTCTGGCTACTTAACTTCAAAAGATCGGCAACCCAATTCAAGCGCGGCTGATCGCAATGATGGTGGTGGGAAGGTTTTGGGTTTGCCTCGGCCGAAACAATCCCAAGTTGCTTGTAAAGCGCGACTTGATGGTTATGATGGAGAGGGATCGTTGTTTGTTGTGAGAAACAACAGTATCAGAAGAGGAGGTCGAAGGATAAGGGATGAGGAAGATGAGTCGTCGGCGTGGTCTGGTTGGAGAGTTTTTCGGTCGTTTGTTTCGCCATGCAGGGAGTGCAGAGCCAGCAAGCCCACTGTCATCGAACCGCGTCCCGTTCAAAGGGCTTGA

Protein sequence

MNWVMAKSESAMGMNSKTKADISSSRNYSLNSLSFSGYLTSKDRQPNSSAADRNDGGGKVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVIEPRPVQRA
Homology
BLAST of Lcy06g007590 vs. ExPASy TrEMBL
Match: A0A6J1CGL7 (uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010640 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 4.8e-20
Identity = 76/157 (48.41%), Postives = 92/157 (58.60%), Query Frame = 0

Query: 5   MAKSESAMGMNSKTKA--DISS--SRNYSL-NSLSFSGYLTSKDRQPNSSAADRNDGGGK 64
           MA S S MG++ K  A  DISS  S +YS  +SLSF+ YLT KDR+PNS    +    G 
Sbjct: 1   MANSNSGMGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGF 60

Query: 65  VLGLPRPKQSQVACKARLDGYDGEG----------SLFVVRNNSIRRGGRRIRDEEDESS 124
             G        + C    DG  G G             VVRNNSIRRGGRRI+DEE+ESS
Sbjct: 61  EFG-------PICCDDH-DGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDEEEESS 120

Query: 125 AWSGW-RVFRSFVSPCRECRASKPTVI---EPRPVQR 143
           + + W  VFRSFVSPCRECRASKP+ +   +  P+QR
Sbjct: 121 SSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQR 149

BLAST of Lcy06g007590 vs. ExPASy TrEMBL
Match: A0A0A0LXF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.1e-19
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0

Query: 17  KTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQVACKA 76
           + K  +SS+ +  LNSLSFSGYL SKDR  P+  + + +D   KV+     + S     +
Sbjct: 5   RKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVD-HGFEFSPTCGGS 64

Query: 77  RLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVI 136
            +  Y    S ++VRNNSI+RG ++I +E+DE S WSGWR+F  FV PCRECRA KP+V+
Sbjct: 65  SVSDYGERSSAYIVRNNSIKRGSKKIWEEKDE-SRWSGWRIFWLFVLPCRECRARKPSVV 124

Query: 137 EPRPVQ 142
           +PRP+Q
Sbjct: 125 QPRPIQ 128

BLAST of Lcy06g007590 vs. ExPASy TrEMBL
Match: A0A5D3DS79 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00970 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.0e-17
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0

Query: 12  MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQ 71
           MG+++K     S++ +  +NSLSFSGYL SKDR +P+  + +  D   KV+         
Sbjct: 1   MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60

Query: 72  VACKARLDGYDGE-GSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRA 131
               + +  Y GE  S ++VRNNSIRRG ++IR+E++ES     WRV  SFV PCRECRA
Sbjct: 61  TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR----WRVVWSFVLPCRECRA 120

Query: 132 SKPTVIEPRPVQ 142
           SKP V++PRP+Q
Sbjct: 121 SKPNVVQPRPIQ 128

BLAST of Lcy06g007590 vs. ExPASy TrEMBL
Match: A0A7J8YN65 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_020602 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = 0

Query: 6   AKSESAMGMNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQPNSS--AADRNDGGG 65
           ++ ++ + M+  T    SSS +YSL+  S        + ++KD+ P+ S  ++  + GGG
Sbjct: 3   SQKQNKISMDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGGG 62

Query: 66  KVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFR 125
            +L L      +   K+R     G+G   +  N  +R  G+R   E   S  W G ++ R
Sbjct: 63  HLLPL------EFLLKSRPPSLSGDGERKL--NGEVRNQGKR---ETMGSKPWFGRKLLR 122

Query: 126 SFVSPCRECRASKPTVIE 137
           SFVSPCRECR  KP+ ++
Sbjct: 123 SFVSPCRECRVVKPSTVK 129

BLAST of Lcy06g007590 vs. ExPASy TrEMBL
Match: A0A5D2TGY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G088900v1 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 0

Query: 14  MNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQP-NSSAADRNDGGGKVLGLPRPK 73
           M+  T    SSS +YSL+  S        + ++KD+ P +S+ + R D GG   G   P 
Sbjct: 1   MDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGG---GHLLPL 60

Query: 74  QSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCREC 133
           +  +  +    G DGE  L    N  +R  G+R   E  +S  W G ++ RSFVSPCREC
Sbjct: 61  EFLLKSRPPSLGGDGERKL----NGEVRNQGKR---ETMDSKPWFGRKLLRSFVSPCREC 119

Query: 134 RASKPTVIE 137
           R  KP+ ++
Sbjct: 121 RVVKPSTVK 119

BLAST of Lcy06g007590 vs. NCBI nr
Match: KAG6573282.1 (hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.5 bits (371), Expect = 8.7e-32
Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 0

Query: 12  MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDRQPN-------------SSAADRNDGGG 71
           M ++SKT  DISSS + S  SLSFSG++TSKDRQP+             SS A+   G  
Sbjct: 1   MAVHSKTNPDISSSSSSSNYSLSFSGFVTSKDRQPDKIIRTPDQRFEFGSSVANHYGGQS 60

Query: 72  KVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFR 131
            VL  PRP+Q+QV+CK +L     E    +VRN+SIRRGGRRIR+EE+ES+ WSGW VFR
Sbjct: 61  LVLPRPRPEQAQVSCKRQL-----ERDELMVRNHSIRRGGRRIREEEEEST-WSGWSVFR 120

Query: 132 SFVSPCRECRASKPTVIEPRPVQRA 144
           SFVSPCRECRASKP V+E RPVQRA
Sbjct: 121 SFVSPCRECRASKPAVVEARPVQRA 139

BLAST of Lcy06g007590 vs. NCBI nr
Match: XP_022139818.1 (uncharacterized protein LOC111010640 [Momordica charantia])

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-19
Identity = 76/157 (48.41%), Postives = 92/157 (58.60%), Query Frame = 0

Query: 5   MAKSESAMGMNSKTKA--DISS--SRNYSL-NSLSFSGYLTSKDRQPNSSAADRNDGGGK 64
           MA S S MG++ K  A  DISS  S +YS  +SLSF+ YLT KDR+PNS    +    G 
Sbjct: 1   MANSNSGMGIHPKNPAQPDISSSGSSSYSFSSSLSFAAYLTCKDREPNSGGLIKTGDQGF 60

Query: 65  VLGLPRPKQSQVACKARLDGYDGEG----------SLFVVRNNSIRRGGRRIRDEEDESS 124
             G        + C    DG  G G             VVRNNSIRRGGRRI+DEE+ESS
Sbjct: 61  EFG-------PICCDDH-DGGSGSGRRRIRDDDGQRWLVVRNNSIRRGGRRIKDEEEESS 120

Query: 125 AWSGW-RVFRSFVSPCRECRASKPTVI---EPRPVQR 143
           + + W  VFRSFVSPCRECRASKP+ +   +  P+QR
Sbjct: 121 SSTSWSSVFRSFVSPCRECRASKPSAVIEAQAHPIQR 149

BLAST of Lcy06g007590 vs. NCBI nr
Match: KGN64696.1 (hypothetical protein Csa_013090 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 8.5e-19
Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = 0

Query: 17  KTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQVACKA 76
           + K  +SS+ +  LNSLSFSGYL SKDR  P+  + + +D   KV+     + S     +
Sbjct: 5   RKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVD-HGFEFSPTCGGS 64

Query: 77  RLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRASKPTVI 136
            +  Y    S ++VRNNSI+RG ++I +E+DE S WSGWR+F  FV PCRECRA KP+V+
Sbjct: 65  SVSDYGERSSAYIVRNNSIKRGSKKIWEEKDE-SRWSGWRIFWLFVLPCRECRARKPSVV 124

Query: 137 EPRPVQ 142
           +PRP+Q
Sbjct: 125 QPRPIQ 128

BLAST of Lcy06g007590 vs. NCBI nr
Match: KAA0057006.1 (hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK26433.1 hypothetical protein E5676_scaffold861G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-17
Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 0

Query: 12  MGMNSKTKADISSSRNYSLNSLSFSGYLTSKDR-QPNSSAADRNDGGGKVLGLPRPKQSQ 71
           MG+++K     S++ +  +NSLSFSGYL SKDR +P+  + +  D   KV+         
Sbjct: 1   MGIHTKKPHMSSTTTSTWVNSLSFSGYLNSKDREEPSLGSIETQDRKIKVVNHGFEFGGP 60

Query: 72  VACKARLDGYDGE-GSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFRSFVSPCRECRA 131
               + +  Y GE  S ++VRNNSIRRG ++IR+E++ES     WRV  SFV PCRECRA
Sbjct: 61  TCRGSSVSDYIGERSSPYIVRNNSIRRGSKKIREEKEESR----WRVVWSFVLPCRECRA 120

Query: 132 SKPTVIEPRPVQ 142
           SKP V++PRP+Q
Sbjct: 121 SKPNVVQPRPIQ 128

BLAST of Lcy06g007590 vs. NCBI nr
Match: MBA0700429.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-04
Identity = 43/138 (31.16%), Postives = 71/138 (51.45%), Query Frame = 0

Query: 6   AKSESAMGMNSKTKADISSSRNYSLNSLSF-----SGYLTSKDRQPNSS--AADRNDGGG 65
           ++ ++ + M+  T    SSS +YSL+  S        + ++KD+ P+ S  ++  + GGG
Sbjct: 3   SQKQNKISMDVATDHSNSSSLDYSLSFTSLVCIDPPNHQSNKDQSPHDSNKSSRPDSGGG 62

Query: 66  KVLGLPRPKQSQVACKARLDGYDGEGSLFVVRNNSIRRGGRRIRDEEDESSAWSGWRVFR 125
            +L L      +   K+R     G+G   +  N  +R  G+R   E   S  W G ++ R
Sbjct: 63  HLLPL------EFLLKSRPPSLSGDGERKL--NGEVRNQGKR---ETMGSKPWFGRKLLR 122

Query: 126 SFVSPCRECRASKPTVIE 137
           SFVSPCRECR  KP+ ++
Sbjct: 123 SFVSPCRECRVVKPSTVK 129

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CGL74.8e-2048.41uncharacterized protein LOC111010640 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A0A0LXF94.1e-1946.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G075010 PE=4 SV=1[more]
A0A5D3DS791.0e-1745.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7J8YN651.3e-0431.16Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_020602 PE=4 SV=1[more]
A0A5D2TGY71.3e-0434.88Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G088900v1 P... [more]
Match NameE-valueIdentityDescription
KAG6573282.18.7e-3258.62hypothetical protein SDJN03_27169, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022139818.11.0e-1948.41uncharacterized protein LOC111010640 [Momordica charantia][more]
KGN64696.18.5e-1946.83hypothetical protein Csa_013090 [Cucumis sativus][more]
KAA0057006.12.1e-1745.45hypothetical protein E6C27_scaffold96G001880 [Cucumis melo var. makuwa] >TYK2643... [more]
MBA0700429.12.6e-0431.16hypothetical protein [Gossypium aridum][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g007590.1Lcy06g007590.1mRNA